Pregenerated sensors for ARHGAP44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033389Ensembl transcript IDs: ENSMUST00000047463.15, ENSMUST00000093001.5, ENSMUST00000093002.12, ENSMUST00000130420.8
Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACTCTCAGACTCCTCTTCCGAGTCCCTCTTGTCTGTTGCCGAGTaGCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTTGACCCC | + |
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Preference number: 1 (lower is better) Translates to: VLSDSSSESLLSVAE*RRACSRGLRRSVDP Trigger: GGGGTCAACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAGAGGGACTCGGAAGAGGAGTCTGAGAGTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR TCA 90 bp | CCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTaGTGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: PPPNSTLVLDMTAKS*WQVPGRLASTALGG Trigger: ACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CCA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTaGTGTCTCAGGGCCCACAGACGTATGTACACGTGTAGGTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: ELMASPWQASQHCPG*CLRAHRRMYTCRLG Trigger: GCCCAACCTACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR GCA 90 bp | GACAGCAAAGAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTaGCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGT | + |
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Preference number: 1 (lower is better) Translates to: DSKELMASPWQASQH*PGWCLRAHRRMYTC Trigger: ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTCTTTGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CCA 90 bp | CTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTAGGTTaGGCCACATCAAAGGGCTGTACTCTCAGACTCCTCTTCCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LGGVSGPTDVCTRVG*ATSKGCTLRLLFRV Trigger: GACTCGGAAGAGGAGTCTGAGAGTACAGCCCTTTGATGTGGCCCAACCTACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR GCA 90 bp | AAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGGACATCTCTTaGCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: KGGLKGFSGWPQDIS*PSERVSSCLASSLA Trigger: GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTCCTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CCA 90 bp | CCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCACCTGCTTTaGGAAACAGAATTATTGCTAGTCAGCTGTAACCTCCAGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PRCGLGAQYHPLHLL*ETELLLVSCNLQKR Trigger: CCTCTTCTGGAGGTTACAGCTGACTAGCAATAATTCTGTTTCCCAAAGCAGGTGGAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR GCA 90 bp | ATAACCTTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTaGCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: ITFNPQAPLQIWGLD*PCQEVSKAVRSSLQ Trigger: CTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAAGGTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR TCA 90 bp | CAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTaGATGCGAAAGTGCTCTAAGATCCCTAATGTGTTTGGGAACATG | + |
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Preference number: 1 (lower is better) Translates to: QKRRVRPHTPTKRGA*MRKCSKIPNVFGNM Trigger: CATGTTCCCAAACACATTAGGGATCTTAGAGCACTTTCGCATTCAGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTaGCCCCAGGACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: YFGAVTKGGLKGFSG*PQDISCPSERVSSC Trigger: ACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTCCTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CCA 90 bp | ATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAAATTTaGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: IYVKITFNPQAPLQI*GLDCPCQEVSKAVR Trigger: CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCAGCACTGCCCTGGGTaGTGTCTCAGGGCCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLQHCPG*CLRAHR Trigger: TCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCTGATGGCAAGTCCCTaGCAGGCTAGCCAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLLMASP*QASQHC Trigger: GCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTGTCCCTCTTGTCTGTTaGCGAGTGCCGCCGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: GRLASTALGGVSGPTDVCVPLVC*RVPPCM Trigger: CATGCACGGCGGCACTCGGCAACAGACAAGAGGGAC...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCCCCTGGTGTTGGACATaGCAGCAAAGAGCTGATGGC | + |
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Preference number: 2 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCPWCWT*QQRADG Trigger: GCCATCAGCTCTTTGCTGTCATGTCCAACACCAGGG...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR GCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCCCCCAGGACATCTCTTaGCCTAGTGAAAGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCPQDIS*PSERVS Trigger: GGAGACCCTTTCACTAGGGCAAGAGATGTCCTGGGG...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACGACCCCAGCTCTATGTaGATGGAGGGGACATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHDPSSM*MEGTSK Trigger: CTTTGATGTCCCCTCCATCCACATAGAGCTGGGGTC...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCCCAGCTCTATGTGGATaGAGGGGACATCAAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCPALCG*RGHQSG Trigger: TCCACTTTGATGTCCCCTCCATCCACATAGAGCTGG...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCCCTGAAAGGTTTTTCTaGTTGGCCCCAGGACATCTC | + |
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Preference number: 2 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCPERFF*LAPGHL Trigger: GAGATGTCCTGGGGCCAACCAGAAAAACCTTTCAGG...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | GCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCGCCCAACTCGCTCAGGCGGAGCGTTaGCCCCAGCTCTATGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: APPTLATWTGELFSSAQLAQAER*PQLYVD Trigger: ATCCACATAGAGCTGGGGTCAACGCTCCGCCTGAGC...GAGTTGGGCGGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTCTGCAAAGGCCATCCTaGCAAGCCCTTGAGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VTSRRGESGPTHLLSGVPLQRPS*QALEWR Trigger: TCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAG...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAACTGATGGCAAGTCCCTaGCAGGCTAGCCAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: FNPQAPLQIWGLDCPCQELMASP*QASQHC Trigger: GCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAG...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CAA 90 bp | CCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTAGGTaGGGCCACATCAAAGGGCTGTACTCTCAGACTCCTCTTCCGAGT | + |
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Preference number: 2 (lower is better) Translates to: PGWCLRAHRRMYTCR*GHIKGLYSQTPLPS Trigger: ACTCGGAAGAGGAGTCTGAGAGTACAGCCCTTTGATGTGGCCCAACCTACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGACAGGCTAGCCAGCACTaGCCTGGGTGGTGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LPGSEQSCKVESADPTLRQASQH*PGWCLR Trigger: CCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTG...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTCAGGCTAGCCAGCACTaGCCTGGGTGGTGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPQASQH*PGWCLR Trigger: CCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTG...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAATGCCCCAGGGCTGCATaGGACGTGGTGAGAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: SSLQIPLSETGEFTLLGKCPRAA*DVVRRM Trigger: CATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCA...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CAA 90 bp | CTTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTaGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: LQPPGSVTNLGTGLP*PGSEQSCKVESADP Trigger: GGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTCCTGAAAGGTTTTTCTaGTTGGCCCCAGGACATCTC | + |
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Preference number: 2 (lower is better) Translates to: VTSRRGESGPTHLLSGVPPERFF*LAPGHL Trigger: GAGATGTCCTGGGGCCAACCAGAAAAACCTTTCAGG...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTTCACAGCTCCGAGTCTaGGCTCATCCTGTACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DIALHSIHMRTRMRMHACSQLRV*AHPVLS Trigger: AGAGAGTACAGGATGAGCTCAGACTCGGAGCTGTGA...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTATGACAGCAAAGAGCTaGTGGCAAGTCCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPMTAKS*WQVPGR Trigger: CCTGCCAGGGACTTGCCATCAGCTCTTTGCTGTCAT...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTAATCATCACCCAGACTaGACAAACAGAATCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: VTSRRGESGPTHLLSGVPNHHPD*TNRICT Trigger: GGTGCAGATTCTGTTTGTTCAGTCTGGGTGATGATT...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGGACCCCAGCTCTATGTaGATGGAGGGGACATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEDPSSM*MEGTSK Trigger: CTTTGATGTCCCCTCCATCCACATAGAGCTGGGGTC...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGACTGCACCACCAACACTaGCCACATGGACAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KGHPDKPLSGELDAACHRLHHQH*PHGQEN Trigger: GTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAG...TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR CAA 90 bp | CCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTaGGATGCTGCTTGCCATAGAGGCCAAAGATGGATCAAAATAGGC | + |
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Preference number: 2 (lower is better) Translates to: PSSCKGHPDKPLSGE*DAACHRGQRWIKIG Trigger: GCCTATTTTGATCCATCTTTGGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAAAGTGGACGAGATCCTaGAAATCCCCCTCATACGTA | + |
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Preference number: 2 (lower is better) Translates to: FNPQAPLQIWGLDCPCQEKWTRS*KSPSYV Trigger: TACGTATGAGGGGGATTTTCAGGATCTCGTCCACTT...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCCTGGTGTTGGACATaGCAGCAAAGAGCTGATGGC | + |
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Preference number: 2 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGPWCWT*QQRADG Trigger: GCCATCAGCTCTTTGCTGTCATGTCCAACACCAGGG...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCCAGCTCTATGTGGATaGAGGGGACATCAAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEPALCG*RGHQSG Trigger: TCCACTTTGATGTCCCCTCCATCCACATAGAGCTGG...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAATGACAGCAAAGAGCTaGTGGCAAGTCCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CFIPLIPKYEQASCALAPMTAKS*WQVPGR Trigger: CCTGCCAGGGACTTGCCATCAGCTCTTTGCTGTCAT...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | TCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTACTTTGCCCTGGTGTTGGACATaGCAGCAAAGAGCTGATGGC | + |
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Preference number: 2 (lower is better) Translates to: SHGESKAVRSGCLKLSTLPWCWT*QQRADG Trigger: GCCATCAGCTCTTTGCTGTCATGTCCAACACCAGGG...CAAAGTACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR TCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCAATCATCACCCAGACTaGACAAACAGAATCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: DISCPSERVSSCLASSLANHHPD*TNRICT Trigger: GGTGCAGATTCTGTTTGTTCAGTCTGGGTGATGATT...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| 3UTR-3UTR CCA 90 bp | TCAATGAACCAGGCAAGAAAGCCACAGCCATCTGCAAGCAAAGCGTCCCTTTCTGACACTTCAACTGACTaGAACATCACCAGCCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SMNQARKPQPSASKASLSDTSTD*NITSRV Trigger: AACTCGGCTGGTGATGTTCCAGTCAGTTGAAGTGTC...AGAAAGGGACGCTTTGCTTGCAGATGGCTGTGGCTTTCTTGCCTGGTTCATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
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| 3UTR-3UTR CCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTGCGGGTATAGTAGATTaGAACAGTAATGTGTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: DIALHSIHMRTRMRMHACAGIVD*NSNVCN Trigger: ATTGCACACATTACTGTTCCAATCTACTATACCCGC...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
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| 3UTR CAA 90 bp | CATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAAATTaGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: HICKDNLQPPGSVTN*GTGLPLPGSEQSCK Trigger: CTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTAATCATCACCCAGACTaGACAAACAGAATCTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: PSSHGESKAVRSGCLKLSNHHPD*TNRICT Trigger: GGTGCAGATTCTGTTTGTTCAGTCTGGGTGATGATT...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGCTGCACCACCAACACTaGCCACATGGACAGGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LDNSLYIYVKITFNPQAPLHHQH*PHGQEN Trigger: GTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAG...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGACCTCTCCACCTGCTTTaGGAAACAGAATTATTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LPGSEQSCKVESADPTLRPLHLL*ETELLL Trigger: TAGCAATAATTCTGTTTCCCAAAGCAGGTGGAGAGG...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAATTTGGGGACTGGACTaGCCTTGCCAGGAAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QQFVHICKDNLQPPGSVTIWGLD*PCQEVS Trigger: GCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAAT...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTCATAGAGGCCAAAGATaGATCAAAATAGGCACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPHRGQR*IKIGTK Trigger: CTTTGTGCCTATTTTGATCCATCTTTGGCCTCTATG...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCTAACACAAAGACATGTGAAGAGACGTAAATATATACAGCGGCGCTATGAATGGGCCTCCAAATTCTaGTCACCCTCACAGCTCCGA | + |
|
Preference number: 2 (lower is better) Translates to: NLTQRHVKRRKYIQRRYEWASKF*SPSQLR Trigger: TCGGAGCTGTGAGGGTGACCAGAATTTGGAGGCCCA...TTCATAGCGCCGCTGTATATATTTACGTCTCTTCACATGTCTTTGTGTTAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR CAA 90 bp | AACATTTTCATATCACAGGACTTGAGGCTCAGTCTAAATTCTCACTaGACCTTGACACCTACCACTGTACTCTCTGGAACTCAGTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: NIFISQDLRLSLNSH*TLTPTTVLSGTQLP Trigger: GGGCAACTGAGTTCCAGAGAGTACAGTGGTAGGTGTCAAGGTCAAGTGAGAATTTAGACTGAGCCTCAAGTCCTGTGATATGAAAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR TCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGAAGTGGACGAGATCCTaGAAATCCCCCTCATACGTA | + |
|
Preference number: 2 (lower is better) Translates to: LDNSLYIYVKITFNPQAPKWTRS*KSPSYV Trigger: TACGTATGAGGGGGATTTTCAGGATCTCGTCCACTT...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTATGCGCATGCACGCATGTACAGAGCCAACACATAATACGAATGTAATGTATTCTCTGGAACTCAGTTaGCCTAAAGCTCCCCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RMRMHACTEPTHNTNVMYSLELS*PKAPHK Trigger: TTTGTGGGGAGCTTTAGGGCAACTGAGTTCCAGAGA...ATACATTACATTCGTATTATGTGTTGGCTCTGTACATGCGTGCATGCGCATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACACCTGAAAGGTTTTTCTaGTTGGCCCCAGGACATCTC | + |
|
Preference number: 2 (lower is better) Translates to: QQFVHICKDNLQPPGSVTPERFF*LAPGHL Trigger: GAGATGTCCTGGGGCCAACCAGAAAAACCTTTCAGG...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCAACCTAACACAAAGACATGTGAAGAGACGTAAATATATACAGCGGCGCTATTCTCCAATGACAGTCTaGGCCTCCAAATTCTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PNLTQRHVKRRKYIQRRYSPMTV*ASKFWS Trigger: TGACCAGAATTTGGAGGCCCAGACTGTCATTGGAGA...ATAGCGCCGCTGTATATATTTACGTCTCTTCACATGTCTTTGTGTTAGGTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGAAAAAGTATATACATCATGTCCAAATCCGCAGGAGAGAGACTTACACTTACCACTGTACTCTCTaGAACTCAGTTGCCCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QQKKYIHHVQIRRRETYTYHCTL*NSVALK Trigger: CTTTAGGGCAACTGAGTTCCAGAGAGTACAGTGGTA...AGTGTAAGTCTCTCTCCTGCGGATTTGGACATGATGTATATACTTTTTCTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR TCA 72 bp | TGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCTGGTaGGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WDVVRRMSRVCW*ATQATLWARCP Trigger: TGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCCTGCTCATCCTTCTCACCACGTCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR GCA 72 bp | GACTCCTCTTCCGAGTCCCTCTTGTCTGTTGCCGAGTaGCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DSSSESLLSVAE*RRACSRGLRRS Trigger: GCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAGAGGGACTCGGAAGAGGAGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTGGCTCAGGCGGAGCGTaGACCCCAGCTCTATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRLASTALGGVSGPTDVCGSGGA*TPALCG Trigger: TCCACATAGAGCTGGGGTCAACGCTCCGCCTGAGCC...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR GCA 72 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTaGCCTGGGTGGTGTCTCAGGGCCCACAGACGTATG | + |
|
Preference number: 3 (lower is better) Translates to: ELMASPWQASQH*PGWCLRAHRRM Trigger: CATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR GCA 72 bp | ACTCTCAGACTCCTCTTCCGAGTCCCTCTTGTCTGTTaGCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLRLLFRVPLVC*RVPPCMFQGAQ Trigger: CTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAGAGGGACTCGGAAGAGGAGTCTGAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAAGGCTTCCTGCGCCCTaGCCCCAGGGCTGCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPGSEQSCKVESADPTLRRLPAP*PQGCMG Trigger: TCCCATGCAGCCCTGGGGCAAGGGCGCAGGAAGCCT...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCGGCTCAGGCGGAGCGTaGACCCCAGCTCTATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DISCPSERVSSCLASSLAGSGGA*TPALCG Trigger: TCCACATAGAGCTGGGGTCAACGCTCCGCCTGAGCC...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | AACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTaGTGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NSTLVLDMTAKS*WQVPGRLASTA Trigger: GGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAAAGTCCCTCTTGTCTGTaGCCGAGTGCCGCCGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SSLQIPLSETGEFTLLGKSPSCL*PSAAVH Trigger: ATGCACGGCGGCACTCGGCAACAGACAAGAGGGACT...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | CACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTaGGTGGAGAGTTGGATGCTGCTTGCCATAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HPHPAKAILTSP*VESWMLLAIEA Trigger: GGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | CACTTCAGAAACAGCGCAGCAGCTTGGATCTGCCACTaGCCCAGAAGCACAAGTGGGCTGTCTGCCTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: HFRNSAAAWICH*PRSTSGLSAST Trigger: GGTTGAGGCAGACAGCCCACTTGTGCTTCTGGGTCAGTGGCAGATCCAAGCTGCTGCGCTGTTTCTGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR TCA 72 bp | GGACTCTTCTGCACCCTCATCCTGCAAAGGCCATCCTaGCAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GLFCTLILQRPS*QALEWRVGCCL Trigger: CAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGCAGAAGAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | GCCTCCAAATTCTGGTCACCCTCACAGCTCCGAGTCTaGGCTCATCCTGTACTCTCTGGAGATAGGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASKFWSPSQLRV*AHPVLSGDRRR Trigger: CCTCCTCCTATCTCCAGAGAGTACAGGATGAGCTCAGACTCGGAGCTGTGAGGGTGACCAGAATTTGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR GCA 72 bp | AACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTaGCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: NPQAPLQIWGLD*PCQEVSKAVRS Trigger: CGACCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | AGCAGCTTGGATCTGCCACTGACCCAGAAGCACAAGTaGGCTGTCTGCCTCAACCACAGTGAATCTGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SSLDLPLTQKHK*AVCLNHSESGI Trigger: GATCCCAGATTCACTGTGGTTGAGGCAGACAGCCCACTTGTGCTTCTGGGTCAGTGGCAGATCCAAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CAA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTTCTTCCGAGTCCCTCTaGTCTGTTGCCGAGTGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PSSHGESKAVRSGCLKLSSSESL*SVAECR Trigger: GCGGCACTCGGCAACAGACAAGAGGGACTCGGAAGA...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | GGCCCAGATCTGTTTTATTCCCTTAATCCCAAAGTATaGACAGGCTTCCTGCGCCCTTGCCCCAGGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GPDLFYSLNPKV*TGFLRPCPRAA Trigger: TGCAGCCCTGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACAGATCTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | GAACAAACAGAATCTGCACCACCAACACTGGCCACATaGACAGGAGAACTCTTTTCCTCCGCCCAACTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EQTESAPPTLAT*TGELFSSAQLH Trigger: GTGGAGTTGGGCGGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAGATTCTGTTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | GGGCTAGGTGCCCAGTACCACCCTCTCCACCTGCTTTaGGAAACAGAATTATTGCTAGTCAGCTGTAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLGAQYHPLHLL*ETELLLVSCNL Trigger: GAGGTTACAGCTGACTAGCAATAATTCTGTTTCCCAAAGCAGGTGGAGAGGGTGGTACTGGGCACCTAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | CTCATTGCTCACAGTGTCAGATCTCCAATGACAGTCTaGGCCTCCAAATTCTGGTCACCCTCACAGCTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LIAHSVRSPMTV*ASKFWSPSQLR Trigger: TCGGAGCTGTGAGGGTGACCAGAATTTGGAGGCCCAGACTGTCATTGGAGATCTGACACTGTGAGCAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAAACTCCACCCTGGTGTaGGACATGACAGCAAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPGSEQSCKVESADPTLRNSTLV*DMTAKS Trigger: GCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTT...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGACCCTTGAGTGGAGAGTaGGATGCTGCTTGCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPGSEQSCKVESADPTLRPLSGE*DAACHR Trigger: TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGG...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCGAAAGGTTTTTCTGGTaGGCCCCAGGACATCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SKAVRSSLQIPLSETGEFERFFW*APGHLL Trigger: CAAGAGATGTCCTGGGGCCAACCAGAAAAACCTTTC...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTCACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTGGAGTAGAGGAAAGTCCCTCTTGTCTGTaGCCGAGTGCCGCCGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RVTYVQILSSDCQRGVEESPSCL*PSAAVH Trigger: ATGCACGGCGGCACTCGGCAACAGACAAGAGGGACT...TTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | CAAAGCGTCCCTTTCTTTAAAACTGCCTGGGAAGGCTaGGGATACAGCTTTGTGGCAGACTGCTTGCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QSVPFFKTAWEG*GYSFVADCLPS Trigger: GCTAGGCAAGCAGTCTGCCACAAAGCTGTATCCTCAGCCTTCCCAGGCAGTTTTAAAGAAAGGGACGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR CCA 72 bp | AAGATAACCTTCAACCCCCAGGCTCCGTTACAAATTTaGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KITFNPQAPLQI*GLDCPCQEVSK Trigger: TTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAAGGTTATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | TCATGTGAACGTGAGGTCAATGCTACCTACACGGTGTaGCTGCAAGAGTCAATGAACCAGGCAAGAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SCEREVNATYTV*LQESMNQARKP Trigger: TGGCTTTCTTGCCTGGTTCATTGACTCTTGCAGCCACACCGTGTAGGTAGCATTGACCTCACGTTCACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAGGGACTGGACTGCCCTaGCCAGGAAGTGAGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QQFVHICKDNLQPPGSVTGTGLP*PGSEQS Trigger: GCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCC...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR GCA 72 bp | AGAGTCAATGAACCAGGCAAGAAAGCCACAGCCATCTaGAAGCAAAGCGTCCCTTTCTTTAAAACTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVNEPGKKATAI*KQSVPFFKTAW Trigger: CCAGGCAGTTTTAAAGAAAGGGACGCTTTGCTTGCAGATGGCTGTGGCTTTCTTGCCTGGTTCATTGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGCCCTTGAGTGGAGAGTaGGATGCTGCTTGCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LDNSLYIYVKITFNPQAPPLSGE*DAACHR Trigger: TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGG...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR TCA 72 bp | TCTGGAGATAGGAGGAGGCAATGGAGACACTTCAACTaGCTGGAACATCACCAGCCGAGTTTTAAGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SGDRRRQWRHFN*LEHHQPSFKET Trigger: AGTTTCCTTAAAACTCGGCTGGTGATGTTCCAGTCAGTTGAAGTGTCTCCATTGCCTCCTCCTATCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR CCA 72 bp | CACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTaGAGTAGAGGAAGCCGTCATCACACGGGGAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HLCSNPQFRLSA*SRGSRHHTGKV Trigger: TACTTTCCCCGTGTGATGACGGCTTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | TTCTCACTTGACCTTGACACCTACCACTGTACTCTCTaGAACTCAGTTGCCCTAAAGCTCCCCACAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FSLDLDTYHCTL*NSVALKLPTKM Trigger: CATTTTTGTGGGGAGCTTTAGGGCAACTGAGTTCCAGAGAGTACAGTGGTAGGTGTCAAGGTCAAGTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGCCCTCTCCACCTGCTTaGGGAAACAGAATTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LDNSLYIYVKITFNPQAPPSPPA*GNRIIA Trigger: AGCAATAATTCTGTTTCCCAAAGCAGGTGGAGAGGG...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CCA 72 bp | TCTATGACTCATTGTGTCCTACACAGTGTGTACGTATaGGCGGGTATAGTAGATTGGAACAGTAATGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SMTHCVLHSVYV*AGIVDWNSNVC Trigger: GCACACATTACTGTTCCAATCTACTATACCCGCCCATACGTACACACTGTGTAGGACACAATGAGTCATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR TCA 72 bp | AATGATTCTTCAAAGCTTCAAATCCCAGAGAACTACTaGATGTCATGTGAACGTGAGGTCAATGCTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: NDSSKLQIPENY*MSCEREVNATY Trigger: GTAGGTAGCATTGACCTCACGTTCACATGACATTCAGTAGTTCTCTGGGATTTGAAGCTTTGAAGAATCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGTATATACATCATGTCCAAATCCGCAGGAGAGAGACTTACACTTCAGAAATGGTCTATGACTCATaGTGTCCTACACAGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KKYIHHVQIRRRETYTSEMVYDS*CPTQCV Trigger: TACACACTGTGTAGGACACAATGAGTCATAGACCAT...TTCTGAAGTGTAAGTCTCTCTCCTGCGGATTTGGACATGATGTATATACTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTTGACTGTCTGTGGCAACACTaGGGGGCCGGCGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVAECRRACSRGLRRSVDCLWQH*GAGGPA Trigger: AGCAGGCCCGCCGGCCCCTCAGTGTTGCCACAGACA...GTCAACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCCTGCTCCGGCAGGGGTaGAGGCAAGGGTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCLLRQG*RQGCSQ Trigger: CTGGCTGCACCCTTGCCTTCACCCCTGCCGGAGCAG...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCCTGACACTGGGAGGCTaGGGAGGCGGCAGGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELMASPWQASQHCPGWCLLTLGG*GGGRVG Trigger: GCCCACCCTGCCGCCTCCTCAGCCTCCCAGTGTCAG...GAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTCGCTCGGGGGTGGGCTaGAGGCTGGCACCTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVCCRVPPCMFQGAQAERRSGVG*RLAPDG Trigger: TCCATCAGGTGCCAGCCTGCAGCCCACCCCCGAGCG...ACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCGCCTCTGCTCCCTGCTaGCCCTGCAGACATGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MASPWQASQHCPGWCLRAASAPC*PCRHAV Trigger: CACCGCATGTCTGCAGGGTCAGCAGGGAGCAGAGGC...GGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR TCA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCTGTCTGTGGCAACACTaGGGGGCCGGCGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELMASPWQASQHCPGWCLCLWQH*GAGGPA Trigger: AGCAGGCCCGCCGGCCCCTCAGTGTTGCCACAGACA...GAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCCCTCCACCAAGCACTaGGCCAGAGTCGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLPSTKH*ARVVRG Trigger: GCCTCTGACGACTCTGGCGCAGTGCTTGGTGGAGGG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCGCCCTGCCCACCGTCTaGTTGGCCAACTGGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCALPTV*LANWRM Trigger: CATGCGCCAGTTGGCCAACCAGACGGTGGGCAGGGC...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTAGTGGCAGGGCTGTCTaGGACCTGCTCCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCSGRAV*DLLRQG Trigger: CCCCTGCCGGAGCAGGTCCCAGACAGCCCTGCCACT...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACAGAGAGCGCAGGAGCTaGAGTGGCAGGGCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHRERRS*SGRAVW Trigger: CCAGACAGCCCTGCCACTCCAGCTCCTGCGCTCTCT...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCGTCCCTCTTGTCTGTTaGCGAGTGCCGCCGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLVPLVC*RVPPCM Trigger: CATGCACGGCGGCACTCGGCAACAGACAAGAGGGAC...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCGCCCTGCCCACCGTCTaGTTGGCCAACTGGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ELMASPWQASQHCPGWCLALPTV*LANWRM Trigger: CATGCGCCAGTTGGCCAACCAGACGGTGGGCAGGGC...GAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCGATCTCTCGGCCACTaGTCATCAGGTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHRSLGH*SSGAPP Trigger: TGGAGGAGCACCTGATGATCAGTGGCCGAGAGATCG...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCGATCTCTCGGCCACTaGTCATCAGGTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLRSLGH*SSGAPP Trigger: TGGAGGAGCACCTGATGATCAGTGGCCGAGAGATCG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCCACTGATCATCAGGTaGTCCTCCAGGGGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLPLIIR*SSRGFP Trigger: TGGGAAGCCCCTGGAGGAGCACCTGATGATCAGTGG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTAGGCGGGGCGCAGGATaGTTTCCGACCAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCRRGAG*FPTSRG Trigger: TCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCT...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTAGTGGCAGGGCTGTCTaGGACCTGCTCCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCSGRAV*DLLRQG Trigger: CCCCTGCCGGAGCAGGTCCCAGACAGCCCTGCCACT...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTCAGGCTGACTGGGGATaGCTGGCCAACGGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCQADWG*LANGLI Trigger: GATCAGCCCGTTGGCCAGCCATCCCCAGTCAGCCTG...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTGTGCTGTGGGACACCTaGTTCACCAGCTCTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCVLWDT*FTSSRR Trigger: GCGCCTAGAGCTGGTGAAGCAGGTGTCCCACAGCAC...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTCCGCAGGCTGAAGGCTaGTGGAAAGCCCTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LVCCRVPPCMFQGAQAERPQAEG*WKALKT Trigger: AGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGG...ACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCAGGCTGAAGGCTGCTaGAAAGCCCTGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLQAEGC*KALKTW Trigger: CCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCCCTGGATGGAACCTaGACTTCCTTTCTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHPLDGT*TSFLPR Trigger: TCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGG...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCGGGCAGGGTGTCCCCTaGATGGAACCTGGACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELMASPWQASQHCPGWCLGQGVP*MEPGLP Trigger: AGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCC...GAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTCCCCAGTTGCGTCCCTaGGCAGGGTGTCCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCPQLRP*AGCPLD Trigger: ATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGG...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCGCACGAAGGGGACCTTaGGAGGAATTGGTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MASPWQASQHCPGWCLRAARRGP*EELVPP Trigger: AGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGC...GGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATCTGACACTGGGAGGCTaGGGAGGCGGCAGGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDLTLGG*GGGRVG Trigger: GCCCACCCTGCCGCCTCCTCAGCCTCCCAGTGTCAG...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTCCCTCCACCAAGCACTaGGCCAGAGTCGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCPSTKH*ARVVRG Trigger: GCCTCTGACGACTCTGGCGCAGTGCTTGGTGGAGGG...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTCCGCAGGCTGAAGGCTaGTGGAAAGCCCTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCPQAEG*WKALKT Trigger: AGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGG...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTCCCCTGGATGGAACCTaGACTTCCTTTCTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVCCRVPPCMFQGAQAERPLDGT*TSFLPR Trigger: TCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGG...ACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTGCACGAAGGGGACCTTaGGAGGAATTGGTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCARRGP*EELVPP Trigger: AGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGC...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTCAGGCTGACTGGGGATaGCTGGCCAACGGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCQADWG*LANGLI Trigger: GATCAGCCCGTTGGCCAGCCATCCCCAGTCAGCCTG...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACACATGCCGTCTAACATaGGGTGCTCTGTGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHTCRLT*GALWTV Trigger: CACAGTCCACAGAGCACCCCATGTTAGACGGCATGT...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCGACCCCAGCTCTATGTaGATGGAGGGGACATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLDPSSM*MEGTSK Trigger: CTTTGATGTCCCCTCCATCCACATAGAGCTGGGGTC...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS-3UTR TCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTCCTCCATCTCCTCCCTaGGGGCATCGGCTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRRGESGPTHLLSGVPPPSPP*GHRLWH Trigger: GTGCCAAAGCCGATGCCCTCAGGGAGGAGATGGAGG...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGCTGCTCCGGCAGGGGTaGAGGCAAGGGTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSSLQIPLSETGEFTLLLLRQG*RQGCSQ Trigger: CTGGCTGCACCCTTGCCTTCACCCCTGCCGGAGCAG...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAACTGACACTGGGAGGCTaGGGAGGCGGCAGGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKLTLGG*GGGRVG Trigger: GCCCACCCTGCCGCCTCCTCAGCCTCCCAGTGTCAG...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAACGCTCGGGGGTGGGCTaGAGGCTGGCACCTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQERSGVG*RLAPDG Trigger: TCCATCAGGTGCCAGCCTGCAGCCCACCCCCGAGCG...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCTTCTTGTGTGTGCTGTaGGACACCTGCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCFLCVL*DTCFTS Trigger: GCTGGTGAAGCAGGTGTCCCACAGCACACACAAGAA...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | TCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTTGACGTGGCCAAAGGAGATTaGGTCCCAGGACAATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVAECRRACSRGLRRSVDVAKGD*VPGQLP Trigger: TGGCAATTGTCCTGGGACCCAATCTCCTTTGGCCAC...GTCAACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTAGAGAGCGCAGGAGCTaGAGTGGCAGGGCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTSRRGESGPTHLLSGVPRERRS*SGRAVW Trigger: CCAGACAGCCCTGCCACTCCAGCTCCTGCGCTCTCT...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | GCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCGCCCAACTCCCCCAGTTGCGTCCCTaGGCAGGGTGTCCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: APPTLATWTGELFSSAQLPQLRP*AGCPLD Trigger: ATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGG...GAGTTGGGCGGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCGAAGCTGGCTGGGGCTaGCAGCCGGCTGTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLAEAGWG*QPAVAP Trigger: TGGGGCCACAGCCGGCTGCCAGCCCCAGCCAGCTTC...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACATGGGGTGCTCTGTaGACTGTGGACTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCTWGAL*TVDLKP Trigger: CGGCTTCAAGTCCACAGTCCACAGAGCACCCCATGT...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTTGCTGGGCTTTGATCTaGGGCAACACAGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCCWALI*GNTACS Trigger: GCTGCAGGCTGTGTTGCCTCAGATCAAAGCCCAGCA...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCTGGTCATCATCTCGGTaGTGTTCCCCTCTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELMASPWQASQHCPGWCLWSSSR*CSPLTV Trigger: CACAGTCAGAGGGGAACATCACCGAGATGATGACCA...GAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCCTGCTCCGGCAGGGGTaGAGGCAAGGGTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFLLRQG*RQGCSQ Trigger: CTGGCTGCACCCTTGCCTTCACCCCTGCCGGAGCAG...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCAACCAGTCTGCGTGCTaGATAATGGGCTCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCNQSAC*IMGSMM Trigger: CATCATCGAGCCCATTATCCAGCACGCAGACTGGTT...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAACCCCAGTTGCGTCCCTaGGCAGGGTGTCCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQEPQLRP*AGCPLD Trigger: ATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGG...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGCTGGCAGCCGGCTGTaGCCCCAGTTGCGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSEQSCKVESADPTLRAGSRL*PQLRPW Trigger: CCAGGGACGCAACTGGGGCCACAGCCGGCTGCCAGC...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTGAAGCTGGCTGGGGCTaGCAGCCGGCTGTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPEAGWG*QPAVAP Trigger: TGGGGCCACAGCCGGCTGCCAGCCCCAGCCAGCTTC...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | TACTCTCAGACTCCTCTTCCGAGTCCCTCTTGTCTGTaGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSQTPLPSPSCL*PSAAVHVPGGS Trigger: TGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAGAGGGACTCGGAAGAGGAGTCTGAGAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGTTGGCACCCGCAGGCTaGAGGCTGCTGGAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSSLQIPLSETGEFTLLLAPAG*RLLESP Trigger: AGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAA...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGTGTCTGTGGCAACACTaGGGGGCCGGCGGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQCLWQH*GAGGPA Trigger: AGCAGGCCCGCCGGCCCCTCAGTGTTGCCACAGACA...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR GCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTTCGCTTGTCGGCCTCTaGTCCCTGCTGACCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DIALHSIHMRTRMRMHACSLVGL*SLLTLQ Trigger: CTGCAGGGTCAGCAGGGAGCAGAGGCCGACAAGCGA...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR GCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAAGGCGGGGCGCAGGATaGTTTCCGACCAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQERRGAG*FPTSRG Trigger: TCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCT...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTAGGCGCTTCTCCACCTaGAGAAGGTCTTCGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCRRFST*RRSSLR Trigger: TCTGAGCGAAGACCTTCTCCAGGTGGAGAAGCGCCT...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
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| CDS-3UTR CCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCGGTCATAAGAGGCTCTaGCAACTCTCGGAGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCGHKRL*QLSEIR Trigger: TCTTATCTCCGAGAGTTGCCAGAGCCTCTTATGACC...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTAGTGGCAGGGCTGTCTaGGACCTGCTCCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPSGRAV*DLLRQG Trigger: CCCCTGCCGGAGCAGGTCCCAGACAGCCCTGCCACT...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATCAGGCTGACTGGGGATaGCTGGCCAACGGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDQADWG*LANGLI Trigger: GATCAGCCCGTTGGCCAGCCATCCCCAGTCAGCCTG...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCTTGGCACCCGCAGGCTaGAGGCTGCTGGAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFLAPAG*RLLESP Trigger: AGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAA...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTGTCTGGGGAGGGCATTaGGCTGTAGTTGGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSRRGESGPTHLLSGVPVWGGH*AVVGIV Trigger: CACAATGCCAACTACAGCTCAATGCCCTCCCCAGAC...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCCAACGGGCTGATCTaGAACAGTCCCTGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDANGLI*NSPWLH Trigger: GTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTGGC...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR GCA 90 bp | GCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCGCCCAACTCCAGTCTTTTCTGCCCTaGCCACCGTCTGGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APPTLATWTGELFSSAQLQSFLP*PPSGWP Trigger: TGGCCAACCAGACGGTGGGCAGGGCAGAAAAGACTG...GAGTTGGGCGGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
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| CDS-3UTR GCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCTCGCTTGTCGGCCTCTaGTCCCTGCTGACCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLASLVGL*SLLTLQ Trigger: CTGCAGGGTCAGCAGGGAGCAGAGGCCGACAAGCGA...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
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| CDS-3UTR GCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGAGGCGGGGCGCAGGATaGTTTCCGACCAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMRRGAG*FPTSRG Trigger: TCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCT...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | ACAGAATCTGCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCGCCCCTGCTATGGCGTaGGGGTCAGCCGAGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TESAPPTLATWTGELFSSAPAMA*GSAEYS Trigger: GGAGTACTCGGCTGACCCCCACGCCATAGCAGGGGC...GGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAGATTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAGCTGGCAGCCGGCTGTaGCCCCAGTTGCGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPAGSRL*PQLRPW Trigger: CCAGGGACGCAACTGGGGCCACAGCCGGCTGCCAGC...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGAGGAGACAGGCTGACTaGGGATGGCTGGCCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMRRQAD*GWLANG Trigger: CCCGTTGGCCAGCCATCCCCAGTCAGCCTGTCTCCT...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | TCAATGAACCAGGCAAGAAAGCCACAGCCATCTGCAAGCAAAGCGTCCCTTTCTGCCTCTGCTCCCTGCTaGCCCTGCAGACATGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMNQARKPQPSASKASLSASAPC*PCRHAV Trigger: CACCGCATGTCTGCAGGGTCAGCAGGGAGCAGAGGC...AGAAAGGGACGCTTTGCTTGCAGATGGCTGTGGCTTTCTTGCCTGGTTCATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
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| CDS-3UTR TCA 90 bp | AAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGACCTCCATCTCCTCCCTaGGGGCATCGGCTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGHPDKPLSGELDAACHRPPSPP*GHRLWH Trigger: GTGCCAAAGCCGATGCCCTCAGGGAGGAGATGGAGG...TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | CTGCAAGAGTCAATGAACCAGGCAAGAAAGCCACAGCCATCTGCAAGCAAAGCGCCTCCATCTCCTCCCTaGGGGCATCGGCTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQESMNQARKPQPSASKAPPSPP*GHRLWH Trigger: GTGCCAAAGCCGATGCCCTCAGGGAGGAGATGGAGG...CGCTTTGCTTGCAGATGGCTGTGGCTTTCTTGCCTGGTTCATTGACTCTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
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| CDS-3UTR TCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATTGCTGGGCTTTGATCTaGGGCAACACAGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDCWALI*GNTACS Trigger: GCTGCAGGCTGTGTTGCCTCAGATCAAAGCCCAGCA...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAACTTTCCGGAGGGTGTaGGGACTCTGGTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQETFRRV*GLWSAG Trigger: TCCTGCAGACCAGAGTCCTCACACCCTCCGGAAAGT...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAAGCCAACGGGCTGATCTaGAACAGTCCCTGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKANGLI*NSPWLH Trigger: GTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTGGC...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGGCCAACGGGCTGATCTaGAACAGTCCCTGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMANGLI*NSPWLH Trigger: GTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTGGC...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGGCCAATTGAAGCCGACAGGCTaGCACTGGGAGGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPDKPLSGELDAACHRGQLKPTG*HWEAEE Trigger: CTCCTCAGCCTCCCAGTGTCAGCCTGTCGGCTTCAA...TTGGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGGCCAAGCTCAGGCGGAGCGTTaGCCCCAGCTCTATGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HPDKPLSGELDAACHRGQAQAER*PQLYVD Trigger: ATCCACATAGAGCTGGGGTCAACGCTCCGCCTGAGC...TTGGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTTCGCTTGTCGGCCTCTaGTCCCTGCTGACCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPSLVGL*SLLTLQ Trigger: CTGCAGGGTCAGCAGGGAGCAGAGGCCGACAAGCGA...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTGACTTGGAAGTCTGCTaGCACCTGGTCCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DIALHSIHMRTRMRMHACDLEVC*HLVREE Trigger: CTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTC...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR GCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGACTTGGAAGTCTGCTaGCACCTGGTCCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDDLEVC*HLVREE Trigger: CTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTC...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGAGACTTCAAAGCCCCTaGTATGGCGTGGGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSSLQIPLSETGEFTLLRLQSP*YGVGVS Trigger: GCTGACCCCCACGCCATAGCAGGGGCTTTGAAGTCT...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTTGTCAAGCACCAGCTTaGCTAAATGTTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRLASTALGGVSGPTDVCCQAPA*LNVSSA Trigger: AGCAGAGGAAACATTTAGCCAAGCTGGTGCTTGACA...ACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTAAAGCCCTGAAGACTTaGAAGTCTGCTGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTSRRGESGPTHLLSGVPKALKT*KSAATW Trigger: CCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTT...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGAGCCCCTGCTATGGCGTaGGGGTCAGCCGAGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGAPAMA*GSAEYS Trigger: GGAGTACTCGGCTGACCCCCACGCCATAGCAGGGGC...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAATCAAAGCCCCTGCTATaGCGTGGGGGTCAGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKSKPLL*RGGQPS Trigger: ACTCGGCTGACCCCCACGCCATAGCAGGGGCTTTGA...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAAGGAGACAGGCTGACTaGGGATGGCTGGCCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSEQSCKVESADPTLRRRQAD*GWLANG Trigger: CCCGTTGGCCAGCCATCCCCAGTCAGCCTGTCTCCT...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGTTGGCACCCGCAGGCTaGAGGCTGCTGGAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRLAPAG*RLLESP Trigger: AGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAA...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAATGCTGGGCTTTGATCTaGGGCAACACAGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKCWALI*GNTACS Trigger: GCTGCAGGCTGTGTTGCCTCAGATCAAAGCCCAGCA...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCACTTTCCGGAGGGTGTaGGGACTCTGGTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLATFRRV*GLWSAG Trigger: TCCTGCAGACCAGAGTCCTCACACCCTCCGGAAAGT...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCCAGTCTTTTCTGCCCTaGCCACCGTCTGGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFQSFLP*PPSGWP Trigger: TGGCCAACCAGACGGTGGGCAGGGCAGAAAAGACTG...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGGACTTGGAAGTCTGCTaGCACCTGGTCCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEDLEVC*HLVREE Trigger: CTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTC...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTGAAGACTTGGAAGTCTaGTGCCACCTGGTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DIALHSIHMRTRMRMHACEDLEV*CHLVRE Trigger: TTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTC...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCCCACTGATCATCAGGTaGTCCTCCAGGGGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFPLIIR*SSRGFP Trigger: TGGGAAGCCCCTGGAGGAGCACCTGATGATCAGTGG...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCCTGGACTTCCTTTCTaGCCAGACCCTGGCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEPGLPF*PDPGDS Trigger: ACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGG...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGTCAAAGCCCCTGCTATaGCGTGGGGGTCAGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQSKPLL*RGGQPS Trigger: ACTCGGCTGACCCCCACGCCATAGCAGGGGCTTTGA...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGCCCCTGGATGGAACCTaGACTTCCTTTCTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRSSLQIPLSETGEFTLLPLDGT*TSFLPR Trigger: TCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGG...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGGCCAAGCACGAAGGGGACCTTaGGAGGAATTGGTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HPDKPLSGELDAACHRGQARRGP*EELVPP Trigger: AGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGC...TTGGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGAAGGAGACAGGCTGACTaGGGATGGCTGGCCAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGRRQAD*GWLANG Trigger: CCCGTTGGCCAGCCATCCCCAGTCAGCCTGTCTCCT...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGGCCATGGAGTAGCCTaGAGGGTAGCTCAGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQEGHGVA*RVAQSI Trigger: TATGGACTGAGCTACCCTCCAGGCTACTCCATGGCC...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAAGCTGCTGGAAAGCCCTaGAGACTTGGAAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKAAGKP*RLGSLL Trigger: CAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGC...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGGTGATGTTCCCCTCTaGCTGTGGCCAAAGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDGDVPL*LWPKEI Trigger: AATCTCCTTTGGCCACAGTCAGAGGGGAACATCACC...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGGTGATGTTCCCCTCTaGCTGTGGCCAAAGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQEGDVPL*LWPKEI Trigger: AATCTCCTTTGGCCACAGTCAGAGGGGAACATCACC...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGGTCTGGGGAGGGCATTaGGCTGTAGTTGGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEVWGGH*AVVGIV Trigger: CACAATGCCAACTACAGCTCAATGCCCTCCCCAGAC...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR TCA 90 bp | AACAGAATCTGCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCTTGAAGCCGACAGGCTaGCACTGGGAGGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRICTTNTGHMDRRTLFLLKPTG*HWEAEE Trigger: CTCCTCAGCCTCCCAGTGTCAGCCTGTCGGCTTCAA...GAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAGATTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR GCA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGCTGACCCTGCAGACATaGGGTGAGCTTCTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRSSLQIPLSETGEFTLLLTLQT*GELLVC Trigger: ACACACAAGAAGCTCACCGCATGTCTGCAGGGTCAG...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
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| CDS-3UTR GCA 90 bp | AAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGACTTGGAAGTCTGCTaGCACCTGGTCCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGHPDKPLSGELDAACHRDLEVC*HLVREE Trigger: CTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTC...TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | CATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGGCCAAGAAGACTTGGAAGTCTaGTGCCACCTGGTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPDKPLSGELDAACHRGQEDLEV*CHLVRE Trigger: TTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTC...TTGGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR GCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCGAAGACTTGGAAGTCTaGTGCCACCTGGTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLAEDLEV*CHLVRE Trigger: TTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTC...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS-3UTR GCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCGTTTGAAAGTAGTTTaGATAGTCAATTTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHRLKVV*IVNFFG Trigger: GCCAAAGAAATTGACTATGCAAACTACTTTCAAACG...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGAGACTTCAAAGCCCCTaGTATGGCGTGGGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQRLQSP*YGVGVS Trigger: GCTGACCCCCACGCCATAGCAGGGGCTTTGAAGTCT...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATAGAGGAGCCTCTTCGTaGCACCCAAGATGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDRGASS*HPRCVH Trigger: ATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCT...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCGTCTGGTTGGCCAACTaGCGCATGCGGTTAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLAVWLAN*RMRLNC Trigger: GCAGTTTAACCGCATGCGCCAGTTGGCCAACCAGAC...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTAAAGCCCTGAAGACTTaGAAGTCTGCTGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DIALHSIHMRTRMRMHACKALKT*KSAATW Trigger: CCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTT...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCATAGTCAATTTCTTTaGCCACAAAACTGTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSAGEPRRPRCGLGAQYHHSQFL*PQNCTC Trigger: ACATGTACAGTTTTGTGGCCAAAGAAATTGACTATG...GTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGCAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGTCAGCCGAGTACTCCTaGACATCCACCACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMSAEYS*TSTTQQ Trigger: CTGCTGTGTGGTGGATGTCCAGGAGTACTCGGCTGA...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGGGCAGGGTGTCCCCTaGATGGAACCTGGACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRGQGVP*MEPGLP Trigger: AGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGAGGGCAGGGTGTCCCCTaGATGGAACCTGGACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGGQGVP*MEPGLP Trigger: AGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCC...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGGCTGGCAGCCGGCTGTaGCCCCAGTTGCGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDNSLYIYVKITFNPQAPAGSRL*PQLRPW Trigger: CCAGGGACGCAACTGGGGCCACAGCCGGCTGCCAGC...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGAGGGGGATGGGGTGCTTaGTGGAGTAGGAGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGGGWGA*WSRRQA Trigger: AGCCTGTCTCCTACTCCACCAAGCACCCCATCCCCC...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGGGGGATGGGGTGCTTaGTGGAGTAGGAGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRGGWGA*WSRRQA Trigger: AGCCTGTCTCCTACTCCACCAAGCACCCCATCCCCC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCGGCCATGGAGTAGCCTaGAGGGTAGCTCAGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLAGHGVA*RVAQSI Trigger: TATGGACTGAGCTACCCTCCAGGCTACTCCATGGCC...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | CCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTaGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSVTNLGTGLP*PGSEQSCKVES Trigger: AGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | GGAGAGAGACTTACACTTCAGAAACAGCGCAGCAGCTaGGATCTGCCACTGACCCAGAAGCACAAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GERLTLQKQRSS*DLPLTQKHKWA Trigger: AGCCCACTTGTGCTTCTGGGTCAGTGGCAGATCCAAGCTGCTGCGCTGTTTCTGAAGTGTAAGTCTCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR TCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTCCTGCAGACATGCGGTaGGCTTCTTGTGTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPPADMR*ASCVCC Trigger: ACAGCACACACAAGAAGCTCACCGCATGTCTGCAGG...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGCTGCTGGAAAGCCCTaGAGACTTGGAAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHPDKPLSGELDAACHRAAGKP*RLGSLL Trigger: CAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGC...TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTACTTTGCCTCCATCTCCTCCCTaGGGGCATCGGCTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHGESKAVRSGCLKLSTLPPSPP*GHRLWH Trigger: GTGCCAAAGCCGATGCCCTCAGGGAGGAGATGGAGG...CAAAGTACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGGCATTCCAGAGAGCCTaGAGTCTCTTGTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEAFQRA*SLLSCS Trigger: GGAGCAAGACAAGAGACTTCAGGCTCTCTGGAATGC...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCTGGTCATCATCTCGGTaGTGTTCCCCTCTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFWSSSR*CSPLTV Trigger: CACAGTCAGAGGGGAACATCACCGAGATGATGACCA...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGCCCAAGATGTGTCCATaGCCCTCACACCCATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQPKMCP*PSHPCH Trigger: ATGGCATGGGTGTGAGGGTCATGGACACATCTTGGG...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047463.15 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGCTGACCCTGCAGACATaGGGTGAGCTTCTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMLTLQT*GELLVC Trigger: ACACACAAGAAGCTCACCGCATGTCTGCAGGGTCAG...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCGCAGGCTGAAGGCTaGTGGAAAGCCCTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGPQAEG*WKALKT Trigger: AGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGG...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | CGCCCTTGCCCCAGGGCTGCATGGGACGTGGTGAGAAGGATGAGCAGGGTCTGCCGTTTGAAAGTAGTTTaGATAGTCAATTTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPCPRAAWDVVRRMSRVCRLKVV*IVNFFG Trigger: GCCAAAGAAATTGACTATGCAAACTACTTTCAAACG...GCAGACCCTGCTCATCCTTCTCACCACGTCCCATGCAGCCCTGGGGCAAGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAATCTGCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCCACTGATCATCAGGTaGTCCTCCAGGGGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRICTTNTGHMDRRTLFLPLIIR*SSRGFP Trigger: TGGGAAGCCCCTGGAGGAGCACCTGATGATCAGTGG...GAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAGATTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTAGACTTCAAAGCCCCTaGTATGGCGTGGGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGESKAVRSGCLKLSRLQSP*YGVGVS Trigger: GCTGACCCCCACGCCATAGCAGGGGCTTTGAAGTCT...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCTTCTTGTGTGTGCTGTaGGACACCTGCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFFLCVL*DTCFTS Trigger: GCTGGTGAAGCAGGTGTCCCACAGCACACACAAGAA...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | CTGCAAGAGTCAATGAACCAGGCAAGAAAGCCACAGCCATCTGCAAGCAAAGCGCAGGCTGAAGGCTGCTaGAAAGCCCTGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQESMNQARKPQPSASKAQAEGC*KALKTW Trigger: CCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTG...CGCTTTGCTTGCAGATGGCTGTGGCTTTCTTGCCTGGTTCATTGACTCTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAATCTGCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCCAGGCTGAAGGCTGCTaGAAAGCCCTGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TESAPPTLATWTGELFSSQAEGC*KALKTW Trigger: CCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTG...GGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAGATTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTCATAGTCAATTTCTTTaGCCACAAAACTGTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCCRVPPCMFQGAQAERHSQFL*PQNCTC Trigger: ACATGTACAGTTTTGTGGCCAAAGAAATTGACTATG...ACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TGCCATAGAGGCCAAAGATGGATCAAAATAGGCACAAAGTCAAAAGGCAAAGGGGCCCCTGCTATGGCGTaGGGGTCAGCCGAGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHRGQRWIKIGTKSKGKGAPAMA*GSAEYS Trigger: GGAGTACTCGGCTGACCCCCACGCCATAGCAGGGGC...CCCTTTGCCTTTTGACTTTGTGCCTATTTTGATCCATCTTTGGCCTCTATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCGTGGCCAAAGGAGATTaGGTCCCAGGACAATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLAVAKGD*VPGQLP Trigger: TGGCAATTGTCCTGGGACCCAATCTCCTTTGGCCAC...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGTTTCTGCCCAGACCCTaGCGACAGTTCCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSSLQIPLSETGEFTLLFLPRP*RQFLAF Trigger: AAAAGCAAGGAACTGTCGCCAGGGTCTGGGCAGAAA...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTGGATGGGGTGCTTGGTaGAGTAGGAGACAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGESKAVRSGCLKLSGWGAW*SRRQAD Trigger: GTCAGCCTGTCTCCTACTCCACCAAGCACCCCATCC...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAATCTGCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCACATGGGGTGCTCTGTaGACTGTGGACTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TESAPPTLATWTGELFSSTWGAL*TVDLKP Trigger: CGGCTTCAAGTCCACAGTCCACAGAGCACCCCATGT...GGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGCAGATTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | GTGAATCTGGGATCTGAGGCATTTGTAGTTCTCGGCTaGGTTTTTACAGGATGGCAGCCTGGGAGACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNLGSEAFVVLG*VFTGWQPGRPR Trigger: CCTCGGTCTCCCAGGCTGCCATCCTGTAAAAACCAAGCCGAGAACTACAAATGCCTCAGATCCCAGATTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR TCA 90 bp | GCTCCCCACAAAAATGAAGGACATGCCCTCATTGCTCACAGTGTCAGATCTCCACCTGCAGACATGCGGTaGGCTTCTTGTGTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APHKNEGHALIAHSVRSPPADMR*ASCVCC Trigger: ACAGCACACACAAGAAGCTCACCGCATGTCTGCAGG...TGGAGATCTGACACTGTGAGCAATGAGGGCATGTCCTTCATTTTTGTGGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR TCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTGCAGACATGCGGTaGGCTTCTTGTGTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGPADMR*ASCVCC Trigger: ACAGCACACACAAGAAGCTCACCGCATGTCTGCAGG...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR TCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCACGATCTCTCGGCCACTaGTCATCAGGTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPRSLGH*SSGAPP Trigger: TGGAGGAGCACCTGATGATCAGTGGCCGAGAGATCG...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGTCTGGGGAGGGCATTaGGCTGTAGTTGGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRVWGGH*AVVGIV Trigger: CACAATGCCAACTACAGCTCAATGCCCTCCCCAGAC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGATGGTGCCACCTTCTTTaGAACTTTCCGGAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSEQSCKVESADPTLRWCHLL*NFPEGV Trigger: CACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCA...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGAACTTCAGTCTTTTCTaGCCTGCCCACCGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELFSSAQLHPGVGHDSKENFSLF*PAHRLV Trigger: AACCAGACGGTGGGCAGGGCAGAAAAGACTGAAGTT...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | GAACTCTTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGGGGTCCCAGGACAATTaGCATGTTACTGGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELFSSAQLHPGVGHDSKEGSQDN*HVTGSH Trigger: ATGACTCCCAGTAACATGGCAATTGTCCTGGGACCC...CTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAAGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGGGGTCCCAGGACAATTaGCATGTTACTGGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMGSQDN*HVTGSH Trigger: ATGACTCCCAGTAACATGGCAATTGTCCTGGGACCC...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAAGGGTCCCAGGACAATTaGCATGTTACTGGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKGSQDN*HVTGSH Trigger: ATGACTCCCAGTAACATGGCAATTGTCCTGGGACCC...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCACCTGGACTTCCTTTCTaGCCAGACCCTGGCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPPGLPF*PDPGDS Trigger: ACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGG...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGTCAGCCGAGTACTCCTaGACATCCACCACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRSAEYS*TSTTQQ Trigger: CTGCTGTGTGGTGGATGTCCAGGAGTACTCGGCTGA...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGGTCATAAGAGGCTCTaGCAACTCTCGGAGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDGHKRL*QLSEIR Trigger: TCTTATCTCCGAGAGTTGCCAGAGCCTCTTATGACC...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTTATTTGATGTTGTTATaGTTGGCCTTGGGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCYLMLL*LALGNF Trigger: GAAGTTGCCCAAGGCCAACCATAACAACATCAAATA...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCAACCAGTCTGCGTGCTaGATAATGGGCTCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLANQSAC*IMGSMM Trigger: CATCATCGAGCCCATTATCCAGCACGCAGACTGGTT...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCATTGAGCTGTAGTTaGCATTGTGGTTCACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDALSCS*HCGSRG Trigger: TCCACGTGAACCACAATGCCAACTACAGCTCAATGC...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGTTTCTGCCCAGACCCTaGCGACAGTTCCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSSAQLHPGVGHDSKELMFLPRP*RQFLAF Trigger: AAAAGCAAGGAACTGTCGCCAGGGTCTGGGCAGAAA...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTAGGGTGTCCCCTGGATaGAACCTGGACTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPRVSPG*NLDFLS Trigger: AGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCT...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAAGGGTGTCCCCTGGATaGAACCTGGACTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGHPDKPLSGELDAACHRRVSPG*NLDFLS Trigger: AGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCT...TCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAGGATGGGGTGCTTGGTaGAGTAGGAGACAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPGWGAW*SRRQAD Trigger: GTCAGCCTGTCTCCTACTCCACCAAGCACCCCATCC...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTACTTTGGGGGGATGGGGTGCTTaGTGGAGTAGGAGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHGESKAVRSGCLKLSTLGGWGA*WSRRQA Trigger: AGCCTGTCTCCTACTCCACCAAGCACCCCATCCCCC...CAAAGTACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGGCCATGGAGTAGCCTaGAGGGTAGCTCAGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRGHGVA*RVAQSI Trigger: TATGGACTGAGCTACCCTCCAGGCTACTCCATGGCC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGACATGCCGTCTAACATaGGGTGCTCTGTGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQTCRLT*GALWTV Trigger: CACAGTCCACAGAGCACCCCATGTTAGACGGCATGT...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAACCAGCTCTATGTGGATaGAGGGGACATCAAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKPALCG*RGHQSG Trigger: TCCACTTTGATGTCCCCTCCATCCACATAGAGCTGG...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS-3UTR TCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGCATTCCAGAGAGCCTaGAGTCTCTTGTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRAFQRA*SLLSCS Trigger: GGAGCAAGACAAGAGACTTCAGGCTCTCTGGAATGC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGATGGTCATCATCTCGGTaGTGTTCCCCTCTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGWSSSR*CSPLTV Trigger: CACAGTCAGAGGGGAACATCACCGAGATGATGACCA...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTCACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTGGAGTAGAGGAATTGAAGCCGACAGGCTaGCACTGGGAGGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTYVQILSSDCQRGVEELKPTG*HWEAEE Trigger: CTCCTCAGCCTCCCAGTGTCAGCCTGTCGGCTTCAA...TTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTAACTTCAGTCTTTTCTaGCCTGCCCACCGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPNFSLF*PAHRLV Trigger: AACCAGACGGTGGGCAGGGCAGAAAAGACTGAAGTT...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR GCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAGAAGACTTGGAAGTCTaGTGCCACCTGGTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPEDLEV*CHLVRE Trigger: TTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTC...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGAAGAGGAGCCTCTTCGTaGCACCCAAGATGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGRGASS*HPRCVH Trigger: ATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCT...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTAGAGGAGCCTCTTCGTaGCACCCAAGATGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGESKAVRSGCLKLSRGASS*HPRCVH Trigger: ATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCT...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTAAAGCCCTGAAGACTTaGAAGTCTGCTGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGESKAVRSGCLKLSKALKT*KSAATW Trigger: CCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTT...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCACAGGCTGAAGGCTGCTaGAAAGCCCTGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPQAEGC*KALKTW Trigger: CCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTG...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTGACAAGCCCTTGAGTGGAGAGTTGGATGCTGCTTGCCATAGAGGCCAAGGTCATAAGAGGCTCTaGCAACTCTCGGAGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPDKPLSGELDAACHRGQGHKRL*QLSEIR Trigger: TCTTATCTCCGAGAGTTGCCAGAGCCTCTTATGACC...TTGGCCTCTATGGCAAGCAGCATCCAACTCTCCACTCAAGGGCTTGTCAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATCTCTTGTCTTGCTCCTaGATATTAGAAGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: APSSCKGHPDKPLSGELDLLSCS*ILEAWI Trigger: GATCCAGGCTTCTAATATCCAGGAGCAAGACAAGAG...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTCAATTGCCATGTTACTaGGAGTCATCTTGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCQLPCY*ESSCLH Trigger: ATGTAAACAAGATGACTCCCAGTAACATGGCAATTG...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGAACCAGTCTGCGTGCTaGATAATGGGCTCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQNQSAC*IMGSMM Trigger: CATCATCGAGCCCATTATCCAGCACGCAGACTGGTT...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGAGAGAGCGCAGGAGCTaGAGTGGCAGGGCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDNSLYIYVKITFNPQAPRERRS*SGRAVW Trigger: CCAGACAGCCCTGCCACTCCAGCTCCTGCGCTCTCT...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGTTTCTGCCCAGACCCTaGCGACAGTTCCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQFLPRP*RQFLAF Trigger: AAAAGCAAGGAACTGTCGCCAGGGTCTGGGCAGAAA...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAACATGGGGTGCTCTGTaGACTGTGGACTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPTWGAL*TVDLKP Trigger: CGGCTTCAAGTCCACAGTCCACAGAGCACCCCATGT...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | GACATCTCTTGCCCTAGTGAAAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTCACACCCATGCTTTaGATTTTCCTAAGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DISCPSERVSSCLASSLALTPML*IFLRPS Trigger: GGATGGCCTTAGGAAAATCCAAAGCATGGGTGTGAG...GGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTTTCACTAGGGCAAGAGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | AAAGATAACCTTCAACCCCCAGGCTCCGTTACAAATTaGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KDNLQPPGSVTN*GTGLPLPGSEQ Trigger: TTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAAGGTTATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTACTTTGGCTGCTGGAAAGCCCTaGAGACTTGGAAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHGESKAVRSGCLKLSTLAAGKP*RLGSLL Trigger: CAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGC...CAAAGTACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTCACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTGGAGTAGAGGAAACTTTCCGGAGGGTGTaGGGACTCTGGTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVTYVQILSSDCQRGVEETFRRV*GLWSAG Trigger: TCCTGCAGACCAGAGTCCTCACACCCTCCGGAAAGT...TTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCATGGTGCCACCTTCTTTaGAACTTTCCGGAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFIPLIPKYEQASCALAPWCHLL*NFPEGV Trigger: CACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCA...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATAGAGGCCAAAGATGGATCAAAATAGGCACAAAGTCAAAAGGCAAAGGGCCTGGACTTCCTTTCTaGCCAGACCCTGGCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHRGQRWIKIGTKSKGKGPGLPF*PDPGDS Trigger: ACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGG...CCCTTTGCCTTTTGACTTTGTGCCTATTTTGATCCATCTTTGGCCTCTATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCTGTCAAGCACCAGCTTaGCTAAATGTTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFCQAPA*LNVSSA Trigger: AGCAGAGGAAACATTTAGCCAAGCTGGTGCTTGACA...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAACTCTTGTCTTGCTCCTaGATATTAGAAGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKLLSCS*ILEAWI Trigger: GATCCAGGCTTCTAATATCCAGGAGCAAGACAAGAG...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | AACCTAACACAAAGACATGTGAAGAGACGTAAATATATACAGCGGCGCTATGAATTGGCACCCGCAGGCTaGAGGCTGCTGGAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLTQRHVKRRKYIQRRYELAPAG*RLLESP Trigger: AGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAA...TTCATAGCGCCGCTGTATATATTTACGTCTCTTCACATGTCTTTGTGTTAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR TCA 90 bp | TCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTACTTTGGGTGATGTTCCCCTCTaGCTGTGGCCAAAGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SHGESKAVRSGCLKLSTLGDVPL*LWPKEI Trigger: AATCTCCTTTGGCCACAGTCAGAGGGGAACATCACC...CAAAGTACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | ACAACAGAAAAAGTATATACATCATGTCCAAATCCGCAGGAGAGAGACTTACACCCCTCCACCAAGCACTaGGCCAGAGTCGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTEKVYTSCPNPQERDLHPSTKH*ARVVRG Trigger: GCCTCTGACGACTCTGGCGCAGTGCTTGGTGGAGGG...GTGTAAGTCTCTCTCCTGCGGATTTGGACATGATGTATATACTTTTTCTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAGCTCCCCACAAAAATGAAGGACATGCCCTCATTGCTCACAGTGTCAGATTTCTTGTGTGTGCTGTaGGACACCTGCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLPTKMKDMPSLLTVSDFLCVL*DTCFTS Trigger: GCTGGTGAAGCAGGTGTCCCACAGCACACACAAGAA...ATCTGACACTGTGAGCAATGAGGGCATGTCCTTCATTTTTGTGGGGAGCTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | GACATAGCCCTGCATTCGATACACATGCGCACGCGTATGCGCATGCACGCATGTCTGCTTTTGAATATTTaGAATTTCCACCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DIALHSIHMRTRMRMHACLLLNI*NFHLSE Trigger: CTCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAG...ACATGCGTGCATGCGCATACGCGTGCGCATGTGTATCGAATGCAGGGCTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGTGTCAAGCACCAGCTTaGCTAAATGTTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQCQAPA*LNVSSA Trigger: AGCAGAGGAAACATTTAGCCAAGCTGGTGCTTGACA...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACATCAAAGCCCCTGCTATaGCGTGGGGGTCAGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQFVHICKDNLQPPGSVTSKPLL*RGGQPS Trigger: ACTCGGCTGACCCCCACGCCATAGCAGGGGCTTTGA...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGCATTGAGCTGTAGTTaGCATTGTGGTTCACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRALSCS*HCGSRG Trigger: TCCACGTGAACCACAATGCCAACTACAGCTCAATGC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | CGTATGCGCATGCACGCATGTACAGAGCCAACACATAATACGAATGTAATGTATGCTGCTGGAAAGCCCTaGAGACTTGGAAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RMRMHACTEPTHNTNVMYAAGKP*RLGSLL Trigger: CAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGC...ATACATTACATTCGTATTATGTGTTGGCTCTGTACATGCGTGCATGCGCATACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR TCA 90 bp | AGGGTCACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTGGAGTAGAGGAAGCATTCCAGAGAGCCTaGAGTCTCTTGTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTYVQILSSDCQRGVEEAFQRA*SLLSCS Trigger: GGAGCAAGACAAGAGACTTCAGGCTCTCTGGAATGC...TTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTGACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGAAAACTGCTTTTGAATATTTaGAATTTCCACCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQIPLSETGEFTLLGKLLLNI*NFHLSE Trigger: CTCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAG...TTTTCCCAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTGGAGTAGAGGAAAAAGCCCTGAAGACTTaGAAGTCTGCTGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVTYVQILSSDCQRGVEEKALKT*KSAATW Trigger: CCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTT...TTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTGACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACTCTTGTCTTGCTCCTaGATATTAGAAGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGLLSCS*ILEAWI Trigger: GATCCAGGCTTCTAATATCCAGGAGCAAGACAAGAG...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCTATTTGATGTTGTTATaGTTGGCCTTGGGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFYLMLL*LALGNF Trigger: GAAGTTGCCCAAGGCCAACCATAACAACATCAAATA...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAACAATTGCCATGTTACTaGGAGTCATCTTGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FNPQAPLQIWGLDCPCQEQLPCY*ESSCLH Trigger: ATGTAAACAAGATGACTCCCAGTAACATGGCAATTG...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR TCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTGGTGCCACCTTCTTTaGAACTTTCCGGAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDNSLYIYVKITFNPQAPWCHLL*NFPEGV Trigger: CACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCA...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAGTCTGGTTGGCCAACTaGCGCATGCGGTTAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQFVHICKDNLQPPGSVTVWLAN*RMRLNC Trigger: GCAGTTTAACCGCATGCGCCAGTTGGCCAACCAGAC...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGACTGCTTTTGAATATTTaGAATTTCCACCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSEQSCKVESADPTLRLLLNI*NFHLSE Trigger: CTCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAG...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCCAATTGCCATGTTACTaGGAGTCATCTTGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SKAVRSSLQIPLSETGEFQLPCY*ESSCLH Trigger: ATGTAAACAAGATGACTCCCAGTAACATGGCAATTG...GAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGTATATACATCATGTCCAAATCCGCAGGAGAGAGACTTACACTTCAGAACCGCAGGCTGAAGGCTaGTGGAAAGCCCTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KKYIHHVQIRRRETYTSEPQAEG*WKALKT Trigger: AGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGG...TTCTGAAGTGTAAGTCTCTCTCCTGCGGATTTGGACATGATGTATATACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAGTGGCCAAAGGAGATTaGGTCCCAGGACAATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQFVHICKDNLQPPGSVTVAKGD*VPGQLP Trigger: TGGCAATTGTCCTGGGACCCAATCTCCTTTGGCCAC...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAAGGGTGTCCCCTGGATaGAACCTGGACTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQFVHICKDNLQPPGSVTRVSPG*NLDFLS Trigger: AGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCT...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACAACATGCCGTCTAACATaGGGTGCTCTGTGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQFVHICKDNLQPPGSVTTCRLT*GALWTV Trigger: CACAGTCCACAGAGCACCCCATGTTAGACGGCATGT...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR GCA 90 bp | ACAACAGAAAAAGTATATACATCATGTCCAAATCCGCAGGAGAGAGACTTACACCTGACCCTGCAGACATaGGGTGAGCTTCTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKVYTSCPNPQERDLHLTLQT*GELLVC Trigger: ACACACAAGAAGCTCACCGCATGTCTGCAGGGTCAG...GTGTAAGTCTCTCTCCTGCGGATTTGGACATGATGTATATACTTTTTCTGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGGCATTGAGCTGTAGTTaGCATTGTGGTTCACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDNSLYIYVKITFNPQAPALSCS*HCGSRG Trigger: TCCACGTGAACCACAATGCCAACTACAGCTCAATGC...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGCTCACACCCATGCTTTaGATTTTCCTAAGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LDNSLYIYVKITFNPQAPLTPML*IFLRPS Trigger: GGATGGCCTTAGGAAAATCCAAAGCATGGGTGTGAG...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | ATATCACAGGACTTGAGGCTCAGTCTAAATTCTCACTaGACCTTGACACCTACCACTGTACTCTCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ISQDLRLSLNSH*TLTPTTVLSGT Trigger: AGTTCCAGAGAGTACAGTGGTAGGTGTCAAGGTCAAGTGAGAATTTAGACTGAGCCTCAAGTCCTGTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR GCA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGCGTTTGAAAGTAGTTTaGATAGTCAATTTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRRLKVV*IVNFFG Trigger: GCCAAAGAAATTGACTATGCAAACTACTTTCAAACG...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CGTATGCGCATGCACGCATGTACAGAGCCAACACATAATACGAATGTAATGTATTGTCAAGCACCAGCTTaGCTAAATGTTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RMRMHACTEPTHNTNVMYCQAPA*LNVSSA Trigger: AGCAGAGGAAACATTTAGCCAAGCTGGTGCTTGACA...ATACATTACATTCGTATTATGTGTTGGCTCTGTACATGCGTGCATGCGCATACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CCA 90 bp | CCGTCATCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTCATAGTCAATTTCTTTaGCCACAAAACTGTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGESKAVRSGCLKLSHSQFL*PQNCTC Trigger: ACATGTACAGTTTTGTGGCCAAAGAAATTGACTATG...ACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGATGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | TGCCATAGAGGCCAAAGATGGATCAAAATAGGCACAAAGTCAAAAGGCAAAGGGCTGCTTTTGAATATTTaGAATTTCCACCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHRGQRWIKIGTKSKGKGLLLNI*NFHLSE Trigger: CTCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAG...CCCTTTGCCTTTTGACTTTGTGCCTATTTTGATCCATCTTTGGCCTCTATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CCA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTATTTGATGTTGTTATaGTTGGCCTTGGGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDNSLYIYVKITFNPQAPYLMLL*LALGNF Trigger: GAAGTTGCCCAAGGCCAACCATAACAACATCAAATA...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| 3UTR CAA 72 bp | GCAAACAAGAGAAGAAACATTTTCATATCACAGGACTaGAGGCTCAGTCTAAATTCTCACTTGACCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ANKRRNIFISQD*RLSLNSHLTLT Trigger: TGTCAAGGTCAAGTGAGAATTTAGACTGAGCCTCAAGTCCTGTGATATGAAAATGTTTCTTCTCTTGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS GCA 90 bp | TCCAGCATCATGTTGTCTGTGGCAACACTGAGGGGCCGGCGGGCCTaGTCTGGCTGGCGCCGGTCAGCAGGGTCCATGTCTGGGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSIMLSVATLRGRRA*SGWRRSAGSMSGEG Trigger: GCCCTCCCCAGACATGGACCCTGCTGACCGGCGCCAGCCAGAGCAGGCCCGCCGGCCCCTCAGTGTTGCCACAGACAACATGATGCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | GGTGAAGGCAAGGGTGCAGCCAGCTCGGAGGGTGGGGCAGGAGGCTaGATGGAAGGCGGGGCGCAGGATGCTTTCCGACCAGCAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GEGKGAASSEGGAGG*MEGGAQDAFRPAEE Trigger: CTCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCTTCCATGCAGCCTCCTGCCCCACCCTCCGAGCTGGCTGCACCCTTGCCTTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | GATGGAGAGAGCGCAGGAGCTGGAGTGGCAGGGCTGTCTGGGACCTaGTCCGGCAGGGGTGAAGGCAAGGGTGCAGCCAGCTCGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DGESAGAGVAGLSGT*SGRGEGKGAASSEG Trigger: ACCCTCCGAGCTGGCTGCACCCTTGCCTTCACCCCTGCCGGAGCAGGTCCCAGACAGCCCTGCCACTCCAGCTCCTGCGCTCTCTCCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | AAGGCAAGGGTGCAGCCAGCTCGGAGGGTGGGGCAGGAGGCTGCATaGAAGGCGGGGCGCAGGATGCTTTCCGACCAGCAGAGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KARVQPARRVGQEAA*KAGRRMLSDQQRSL Trigger: GAGGCTCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCTTCCATGCAGCCTCCTGCCCCACCCTCCGAGCTGGCTGCACCCTTGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS TCA 90 bp | TTTAGACACACTGGGGCGCTCGGGGGTGGGCTGCAGGCTGGCACCTaGTGGAGAGAGCGCAGGAGCTGGAGTGGCAGGGCTGTCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FRHTGALGGGLQAGT*WRERRSWSGRAVWD Trigger: GTCCCAGACAGCCCTGCCACTCCAGCTCCTGCGCTCTCTCCATCAGGTGCCAGCCTGCAGCCCACCCCCGAGCGCCCCAGTGTGTCTAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | ATGTTGTCTGTGGCAACACTGAGGGGCCGGCGGGCCTGCTCTGGCTaGCGCCGGTCAGCAGGGTCCATGTCTGGGGAGGGCATTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSVATLRGRRACSG*RRSAGSMSGEGIEL Trigger: CAGCTCAATGCCCTCCCCAGACATGGACCCTGCTGACCGGCGCCAGCCAGAGCAGGCCCGCCGGCCCCTCAGTGTTGCCACAGACAACAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | GCAGCCGGCTGTGGCCCCAGTTGCGTCCCTGGGCAGGGTGTCCCCTaGATGGAACCTGGACTTCCTTTCTGCCCAGACCCTGGCGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGCGPSCVPGQGVP*MEPGLPFCPDPGDS Trigger: ACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGGCCACAGCCGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | AAACTTTCCGGAGGGTGTGAGGACTCTGGTCTGCAGGAAGCTGGCTaGGGCTGGCAGCCGGCTGTGGCCCCAGTTGCGTCCCTGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLSGGCEDSGLQEAG*GWQPAVAPVASLGR Trigger: CCTGCCCAGGGACGCAACTGGGGCCACAGCCGGCTGCCAGCCCCAGCCAGCTTCCTGCAGACCAGAGTCCTCACACCCTCCGGAAAGTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | CTCGGAGGGTGGGGCAGGAGGCTGCATGGAAGGCGGGGCGCAGGATaGTTTCCGACCAGCAGAGGAGCCTCTTCGTGCCACCCAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LGGWGRRLHGRRGAG*FPTSRGASSCHPRC Trigger: ACATCTTGGGTGGCACGAAGAGGCTCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCTTCCATGCAGCCTCCTGCCCCACCCTCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | CCGGCTGTGGCCCCAGTTGCGTCCCTGGGCAGGGTGTCCCCTGGATaGAACCTGGACTTCCTTTCTGCCCAGACCCTGGCGACAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAVAPVASLGRVSPG*NLDFLSAQTLATVP Trigger: AGGAACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGGCCACAGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS TCA 90 bp | GGTGGAGTAGGAGACAGGCTGACTGGGGATGGCTGGCCAACGGGCTaGTCTGAAACAGTCCCTGGCTGCACGAAGGGGACCTTGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGVGDRLTGDGWPTG*SETVPGCTKGTLGG Trigger: TCCTCCCAAGGTCCCCTTCGTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTGGCCAGCCATCCCCAGTCAGCCTGTCTCCTACTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | CACGCCTCGATAGGGAAGGCGATCTCTCGGCCACTGATCATCAGGTaGTCCTCCAGGGGCTTCCCAAAGGAAGGCTTCTCCACCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HASIGKAISRPLIIR*SSRGFPKEGFSTQA Trigger: GGCCTGGGTGGAGAAGCCTTCCTTTGGGAAGCCCCTGGAGGAGCACCTGATGATCAGTGGCCGAGAGATCGCCTTCCCTATCGAGGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GCACCACCAACACTGGCCACATGGACAGGAGAACTCTTTTCCTCCGCCCAACTCCTGCCCACCGTCTGGTaGGCCAACTGGCGCATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: APPTLATWTGELFSSAQLLPTVW*ANWRMR Trigger: CCGCATGCGCCAGTTGGCCAACCAGACGGTGGGCAG...GAGTTGGGCGGAGGAAAAGAGTTCTCCTGTCCATGTGGCCAGTGTTGGTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTTGACGAAAGCCCTGAAGACTaGGAAGTCTGCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVAECRRACSRGLRRSVDESPED*EVCCHL Trigger: CAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTC...GTCAACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS TCA 90 bp | GGCATCGGCTTTGGCACCCGCAGGCTGAAGGCTGCTGGAAAGCCCTaGAGACTTGGAAGTCTGCTGCCACCTGGTCCGGGAAGAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GIGFGTRRLKAAGKP*RLGSLLPPGPGRVH Trigger: ATGGACTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAAAGCCGATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS TCA 90 bp | CTCTGGCTGGCGCCGGTCAGCAGGGTCCATGTCTGGGGAGGGCATTaGGCTGTAGTTGGCATTGTGGTTCACGTGGACTGGACTCCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LWLAPVSRVHVWGGH*AVVGIVVHVDWTPV Trigger: TACGGGAGTCCAGTCCACGTGAACCACAATGCCAACTACAGCTCAATGCCCTCCCCAGACATGGACCCTGCTGACCGGCGCCAGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | AGGCGGGGCGCAGGATGCTTTCCGACCAGCAGAGGAGCCTCTTCGTaGCACCCAAGATGTGTCCATGACCCTCACACCCATGCCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRGAGCFPTSRGASS*HPRCVHDPHTHAIL Trigger: AAGGATGGCATGGGTGTGAGGGTCATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047463.15 |
||
| CDS CCA 90 bp | AGAGGCCATGGAGTAGCCTGGAGGGTAGCTCAGTCCATAGGGGGATaGGGTGCTTGGTGGAGTAGGAGACAGGCTGACTGGGGATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGHGVAWRVAQSIGG*GAWWSRRQADWGWL Trigger: CAGCCATCCCCAGTCAGCCTGTCTCCTACTCCACCAAGCACCCCATCCCCCTATGGACTGAGCTACCCTCCAGGCTACTCCATGGCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGAGCCACGCAGGCCACGCTGTGGGCTAGGTGCCCAGTACCACCCTCTCCCTCACACCCATGCTTaGGATTTTCCTAAGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AGEPRRPRCGLGAQYHPLPHTHA*DFPKAI Trigger: GATGGCCTTAGGAAAATCCAAAGCATGGGTGTGAGG...GAGAGGGTGGTACTGGGCACCTAGCCCACAGCGTGGCCTGCGTGGCTCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS TCA 90 bp | AGTAGGAGACAGGCTGACTGGGGATGGCTGGCCAACGGGCTGATCTaGAACAGTCCCTGGCTGCACGAAGGGGACCTTGGGAGGAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRQADWGWLANGLI*NSPWLHEGDLGRNW Trigger: CCAATTCCTCCCAAGGTCCCCTTCGTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTGGCCAGCCATCCCCAGTCAGCCTGTCTCCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | GTCCCTGGGCAGGGTGTCCCCTGGATGGAACCTGGACTTCCTTTCTaGCCAGACCCTGGCGACAGTTCCTTGCTTTTAGACACACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPGQGVPWMEPGLPF*PDPGDSSLLLDTLG Trigger: CCCCAGTGTGTCTAAAAGCAAGGAACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | AGGCGGGGCGCAGGATGCTTTCCGACCAGCAGAGGAGCCTCTTCGTaGCACCCAAGATGTGTCCATGACCCTCACACCCATGCTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRGAGCFPTSRGASS*HPRCVHDPHTHALD Trigger: ATCCAAAGCATGGGTGTGAGGGTCATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | CTTCTCCACCTGGAGAAGGTCTTCGCTCAGAACTTCAGTCTTTTCTaGCCAACGACCCGCGCGGACCCAGGAGGGACGCACAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLHLEKVFAQNFSLF*PTTRADPGGTHKLQ Trigger: CTGGAGCTTGTGCGTCCCTCCTGGGTCCGCGCGGGTCGTTGGGCAGAAAAGACTGAAGTTCTGAGCGAAGACCTTCTCCAGGTGGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS TCA 90 bp | ATCGCTTGTCGGCCTCTGCTCCCTGCTGACCCTGCAGACATGCGGTaGGCTTCTTGTGTGTGCTGTGGGACACCTGCTTCACCAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: IACRPLLPADPADMR*ASCVCCGTPASPAL Trigger: TAGAGCTGGTGAAGCAGGTGTCCCACAGCACACACAAGAAGCTCACCGCATGTCTGCAGGGTCAGCAGGGAGCAGAGGCCGACAAGCGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 |
||
| CDS TCA 90 bp | GCTTCCCAAAGGAAGGCTTCTCCACCCAGGCCTCCTGCTGGGCTTTaGTCTGAGGCAACACAGCCTGCAGCAGTGTCAGCGACTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASQRKASPPRPPAGL*SEATQPAAVSATSC Trigger: ACAGGAAGTCGCTGACACTGCTGCAGGCTGTGTTGCCTCAGATCAAAGCCCAGCAGGAGGCCTGGGTGGAGAAGCCTTCCTTTGGGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 90 bp | CCCTGCAGACATGCGGTGAGCTTCTTGTGTGTGCTGTGGGACACCTaGTTCACCAGCTCTAGGCGCTTCTCCACCTGGAGAAGGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PCRHAVSFLCVLWDT*FTSSRRFSTWRRSS Trigger: CGAAGACCTTCTCCAGGTGGAGAAGCGCCTAGAGCTGGTGAAGCAGGTGTCCCACAGCACACACAAGAAGCTCACCGCATGTCTGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 |
||
| CDS GCA 90 bp | GCTGTAGACATGCTTTCCCCCGGCGACATGCCGTCTAACATGGGGTaGTCTGTGGACTGTGGACTTGAAGCCGACAGGCTGACACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVDMLSPGDMPSNMG*SVDCGLEADRLTLG Trigger: TCCCAGTGTCAGCCTGTCGGCTTCAAGTCCACAGTCCACAGAGCACCCCATGTTAGACGGCATGTCGCCGGGGGAAAGCATGTCTACAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | CTTTGGCACCCGCAGGCTGAAGGCTGCTGGAAAGCCCTGAAGACTTaGAAGTCTGCTGCCACCTGGTCCGGGAAGAGTCCATGTCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWHPQAEGCWKALKT*KSAATWSGKSPCQA Trigger: TGCTTGACATGGACTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGCTCAGGCGGAGCGTaGACCCCAGCTCTATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRSSLQIPLSETGEFTLLGSGGA*TPALCG Trigger: TCCACATAGAGCTGGGGTCAACGCTCCGCCTGAGCC...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS GCA 90 bp | TCTGTAGACATGCTTTCCCCCGGCGACATGCCGTCTAACATGGGGTaGTCTGTGGACTGTGGACTTGAAGCCGACAGGCTGACACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVDMLSPGDMPSNMG*SVDCGLEADRLTLG Trigger: TCCCAGTGTCAGCCTGTCGGCTTCAAGTCCACAGTCCACAGAGCACCCCATGTTAGACGGCATGTCGCCGGGGGAAAGCATGTCTACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTAACTCCAGCATCATGTaGTCTGTGGCAACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCNSSIM*SVATLR Trigger: CCTCAGTGTTGCCACAGACAACATGATGCTGGAGTT...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCACTGCCCTGGGTGGTGTCTCAGGGCCCACAGACGTATGTACACGTGTTTGGTGCCACCTTCTTaGAAACTTTCCGGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SQHCPGWCLRAHRRMYTCLVPPS*KLSGGC Trigger: ACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCAA...ACACGTGTACATACGTCTGTGGGCCCTGAGACACCACCCAGGGCAGTGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTCCGCCCAACTCCACCCTGGTGTTGGACATGACAGCAAAGAGCTGATGTCTTCCGAGTCCCTCTaGTCTGTTGCCGAGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSAQLHPGVGHDSKELMSSESL*SVAECR Trigger: GCGGCACTCGGCAACAGACAAGAGGGACTCGGAAGA...CATCAGCTCTTTGCTGTCATGTCCAACACCAGGGTGGAGTTGGGCGGAGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS CCA 90 bp | CAACGGGCTGATCTGAAACAGTCCCTGGCTGCACGAAGGGGACCTTaGGAGGAATTGGTGCCACCTTCTTTGAAACTTTCCGGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QRADLKQSLAARRGP*EELVPPSLKLSGGC Trigger: ACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTGTTGCCGAGTGCCGCCGTGCATGTTCCAGGGGGCTCAGGCGGAGCGTTCTGCTTTTGAATATTaGGAATTTCCACCTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LVCCRVPPCMFQGAQAERSAFEY*EFPPQR Trigger: TCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAGA...ACGCTCCGCCTGAGCCCCCTGGAACATGCACGGCGGCACTCGGCAACAGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAACCTGGCGACAGTTCCTaGCTTTTAGACACACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FNPQAPLQIWGLDCPCQEPGDSS*LLDTLG Trigger: CCCCAGTGTGTCTAAAAGCAAGGAACTGTCGCCAGG...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTGGACCTTGGGAGGAATaGGTGCCACCTTCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VTSRRGESGPTHLLSGVPGPWEE*VPPSLK Trigger: TTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCC...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS CCA 90 bp | GAAGGCTGCTGGAAAGCCCTGAAGACTTGGAAGTCTGCTGCCACCTaGTCCGGGAAGAGTCCATGTCAAGCACCAGCTTGGCTAAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGCWKALKTWKSAAT*SGKSPCQAPAWLNV Trigger: AACATTTAGCCAAGCTGGTGCTTGACATGGACTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATAGAGGCCAAAGATGGATCAAAATAGGCACAAAGTCAAAAGGCAAAGGGCTGCCCACCGTCTGGTaGGCCAACTGGCGCATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CHRGQRWIKIGTKSKGKGLPTVW*ANWRMR Trigger: CCGCATGCGCCAGTTGGCCAACCAGACGGTGGGCAG...CCCTTTGCCTTTTGACTTTGTGCCTATTTTGATCCATCTTTGGCCTCTATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
||
| CDS GCA 90 bp | AACCAGTCTGCGTGCTGGATAATGGGCTCGATGATGCCAACGATCTaGAGGGAAACTGTGGTCATCATCTCGGTGATGTTCCCCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NQSACWIMGSMMPTI*RETVVIISVMFPSD Trigger: GTCAGAGGGGAACATCACCGAGATGATGACCACAGTTTCCCTGCAGATCGTTGGCATCATCGAGCCCATTATCCAGCACGCAGACTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGAAAGCCCTGAAGACTaGGAAGTCTGCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSEQSCKVESADPTLRESPED*EVCCHL Trigger: CAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTC...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGGAAAGCCCTGAAGACTaGGAAGTCTGCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQESPED*EVCCHL Trigger: CAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTC...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGATGGCAAGTCCCTGGCAGGCTAGCCAGCACTGCCCTGGGTGGTGTCTCGCGTTTGAAAGTAGTTaGCATAGTCAATTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELMASPWQASQHCPGWCLAFESS*HSQFLW Trigger: CCAAAGAAATTGACTATGCAAACTACTTTCAAACGC...GAGACACCACCCAGGGCAGTGCTGGCTAGCCTGCCAGGGACTTGCCATCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GTAACCTCCAGAAGAGGAGAGTCAGGCCCCACACACCTACTAAGCGGGGTGCCTTTGATGTTGTTATGGTaGGCCTTGGGCAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTSRRGESGPTHLLSGVPLMLLW*ALGNFS Trigger: TGAGAAGTTGCCCAAGGCCAACCATAACAACATCAA...AGGCACCCCGCTTAGTAGGTGTGTGGGGCCTGACTCTCCTCTTCTGGAGGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACCCCCAGGCTCCGTTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAAACTCCAGCATCATGTaGTCTGTGGCAACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FNPQAPLQIWGLDCPCQENSSIM*SVATLR Trigger: CCTCAGTGTTGCCACAGACAACATGATGCTGGAGTT...TTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAACGGAGCCTGGGGGTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGACGGGTGAGTTCACACTGCTGGGACCTTGGGAGGAATaGGTGCCACCTTCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VRSSLQIPLSETGEFTLLGPWEE*VPPSLK Trigger: TTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCC...CAGCAGTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GCACCCTCATCCTGCAAAGGCCATCCTGACAAGCCCTTGAGTGGAGAGTTGGATCCTCACACCCATGCTTaGGATTTTCCTAAGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: APSSCKGHPDKPLSGELDPHTHA*DFPKAI Trigger: GATGGCCTTAGGAAAATCCAAAGCATGGGTGTGAGG...ATCCAACTCTCCACTCAAGGGCTTGTCAGGATGGCCTTTGCAGGATGAGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAAGTCCCTCTTGTCTGTaGCCGAGTGCCGCCGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CFIPLIPKYEQASCALAPSPSCL*PSAAVH Trigger: ATGCACGGCGGCACTCGGCAACAGACAAGAGGGACT...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093002.12 |
||
| CDS-3UTR CAA 90 bp | ATAGGAGGAGGCAATGGAGACACTTCAACTGACTGGAACATCACCAGCCGAGTTGAAAGCCCTGAAGACTaGGAAGTCTGCTGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGGGNGDTSTDWNITSRVESPED*EVCCHL Trigger: CAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTC...AACTCGGCTGGTGATGTTCCAGTCAGTTGAAGTGTCTCCATTGCCTCCTCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS-3UTR CAA 90 bp | TACTTTGGAGCTGTGACTAAGGGTGGCCTGAAAGGTTTTTCTGGTTGGCCCCAGTGTCTGGGGAGGGCATaGAGCTGTAGTTGGCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: YFGAVTKGGLKGFSGWPQCLGRA*SCSWHC Trigger: ACAATGCCAACTACAGCTCAATGCCCTCCCCAGACA...CTGGGGCCAACCAGAAAAACCTTTCAGGCCACCCTTAGTCACAGCTCCAAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGCCTGGCGACAGTTCCTaGCTTTTAGACACACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRPGDSS*LLDTLG Trigger: CCCCAGTGTGTCTAAAAGCAAGGAACTGTCGCCAGG...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAAACTCCAGCATCATGTaGTCTGTGGCAACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSEQSCKVESADPTLRNSSIM*SVATLR Trigger: CCTCAGTGTTGCCACAGACAACATGATGCTGGAGTT...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGAGGGGTGGGCCGAGATTaGGCTAAAGTGCTTGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGGVGRD*AKVLVK Trigger: CTTTACAAGCACTTTAGCCAAATCTCGGCCCACCCC...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTACAAATTTGGGGACTGGACTGCCCTTGCCAGGAAGTGAGCAAAGCTGTAAGGGGGGTGGGCCGAGATTaGGCTAAAGTGCTTGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQIWGLDCPCQEVSKAVRGVGRD*AKVLVK Trigger: CTTTACAAGCACTTTAGCCAAATCTCGGCCCACCCC...CCTTACAGCTTTGCTCACTTCCTGGCAAGGGCAGTCCAGTCCCCAAATTTGTAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGATTGGTGCCACCTTCTTaGAAACTTTCCGGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLLLSCFFSGPYDDAVGLVPPS*KLSGGC Trigger: ACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCAA...TCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTCCTCCTGTCTTGCTTCTTCTCTGGCCCTTATGATGATGCTGTAGGACCTTTGATGTTGTTATGGTaGGCCTTGGGCAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLLLSCFFSGPYDDAVGPLMLLW*ALGNFS Trigger: TGAGAAGTTGCCCAAGGCCAACCATAACAACATCAA...AGGTCCTACAGCATCATCATAAGGGCCAGAGAAGAAGCAAGACAGGAGGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTATTCCCTTAATCCCAAAGTATGAACAGGCTTCCTGCGCCCTTGCCCCAGGACCTTGGGAGGAATaGGTGCCACCTTCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFIPLIPKYEQASCALAPGPWEE*VPPSLK Trigger: TTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCC...TGGGGCAAGGGCGCAGGAAGCCTGTTCATACTTTGGGATTAAGGGAATAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TCACACGGGGAAAGTAAAGCTGTCAGAAGTGGATGTCTGAAGCTGAGTACTTTGGGGGTGGGCCGAGATTaGGCTAAAGTGCTTGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHGESKAVRSGCLKLSTLGVGRD*AKVLVK Trigger: CTTTACAAGCACTTTAGCCAAATCTCGGCCCACCCC...CAAAGTACTCAGCTTCAGACATCCACTTCTGACAGCTTTACTTTCCCCGTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | CTTGACAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTGTCTGGGGAGGGCATaGAGCTGTAGTTGGCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: LDNSLYIYVKITFNPQAPCLGRA*SCSWHC Trigger: ACAATGCCAACTACAGCTCAATGCCCTCCCCAGACA...CGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTGTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATAGAGGCCAAAGATGGATCAAAATAGGCACAAAGTCAAAAGGCAAAGGGTTGGTGCCACCTTCTTaGAAACTTTCCGGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHRGQRWIKIGTKSKGKGLVPPS*KLSGGC Trigger: ACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCAA...CCCTTTGCCTTTTGACTTTGTGCCTATTTTGATCCATCTTTGGCCTCTATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGGAAGTGAGCAAAGCTGTAAGGTCGAGTCTGCAGATCCCACTCTCAGAGCGTTTGAAAGTAGTTaGCATAGTCAATTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSEQSCKVESADPTLRAFESS*HSQFLW Trigger: CCAAAGAAATTGACTATGCAAACTACTTTCAAACGC...TCTGAGAGTGGGATCTGCAGACTCGACCTTACAGCTTTGCTCACTTCCTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTCACTTATGTTCAAATCCTCAGTTCAGATTGTCAGCGTGGAGTAGAGGAATCTGCTTTTGAATATTaGGAATTTCCACCTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVTYVQILSSDCQRGVEESAFEY*EFPPQR Trigger: TCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAGA...TTCCTCTACTCCACGCTGACAATCTGAACTGAGGATTTGAACATAAGTGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGTTTGTACATATATGTAAAGATAACCTTCAACCCCCAGGCTCCGTTACATTGATGTTGTTATGGTaGGCCTTGGGCAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QQFVHICKDNLQPPGSVTLMLLW*ALGNFS Trigger: TGAGAAGTTGCCCAAGGCCAACCATAACAACATCAA...TGTAACGGAGCCTGGGGGTTGAAGGTTATCTTTACATATATGTACAAACTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTATATACATCATGTCCAAATCCGCAGGAGAGAGACTTACACTTCAGAATCTGCTTTTGAATATTaGGAATTTCCACCTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KKYIHHVQIRRRETYTSESAFEY*EFPPQR Trigger: TCGCTGAGGTGGAAATTCCAAATATTCAAAAGCAGA...TTCTGAAGTGTAAGTCTCTCTCCTGCGGATTTGGACATGATGTATATACTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
||
| CDS TCA 72 bp | ACTGGGGCGCTCGGGGGTGGGCTGCAGGCTGGCACCTaGTGGAGAGAGCGCAGGAGCTGGAGTGGCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGALGGGLQAGT*WRERRSWSGRA Trigger: AGCCCTGCCACTCCAGCTCCTGCGCTCTCTCCATCAGGTGCCAGCCTGCAGCCCACCCCCGAGCGCCCCAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 72 bp | AGCGCAGGAGCTGGAGTGGCAGGGCTGTCTGGGACCTaGTCCGGCAGGGGTGAAGGCAAGGGTGCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAGAGVAGLSGT*SGRGEGKGAAS Trigger: GCTGGCTGCACCCTTGCCTTCACCCCTGCCGGAGCAGGTCCCAGACAGCCCTGCCACTCCAGCTCCTGCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
||
| CDS GCA 72 bp | ATGTTGTCTGTGGCAACACTGAGGGGCCGGCGGGCCTaGTCTGGCTGGCGCCGGTCAGCAGGGTCCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLSVATLRGRRA*SGWRRSAGSMS Trigger: AGACATGGACCCTGCTGACCGGCGCCAGCCAGAGCAGGCCCGCCGGCCCCTCAGTGTTGCCACAGACAACAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS GCA 72 bp | TGGGGCAGGAGGCTGCATGGAAGGCGGGGCGCAGGATaGTTTCCGACCAGCAGAGGAGCCTCTTCGTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: WGRRLHGRRGAG*FPTSRGASSCH Trigger: GTGGCACGAAGAGGCTCCTCTGCTGGTCGGAAAGCATCCTGCGCCCCGCCTTCCATGCAGCCTCCTGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | GCCCCAGTTGCGTCCCTGGGCAGGGTGTCCCCTGGATaGAACCTGGACTTCCTTTCTGCCCAGACCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: APVASLGRVSPG*NLDFLSAQTLA Trigger: CGCCAGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS TCA 72 bp | GGAGACAGGCTGACTGGGGATGGCTGGCCAACGGGCTaGTCTGAAACAGTCCCTGGCTGCACGAAGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: GDRLTGDGWPTG*SETVPGCTKGT Trigger: GGTCCCCTTCGTGCAGCCAGGGACTGTTTCAGATCAGCCCGTTGGCCAGCCATCCCCAGTCAGCCTGTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | TGTGGCCCCAGTTGCGTCCCTGGGCAGGGTGTCCCCTaGATGGAACCTGGACTTCCTTTCTGCCCAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: CGPSCVPGQGVP*MEPGLPFCPDP Trigger: AGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCCAGGGACGCAACTGGGGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CAA 90 bp | GCTCTGGCTGGCGCCGGTCAGCAGGGTCCATGTCTGGGGAGGGCATaGAGCTGTAGTTGGCATTGTGGTTCACGTGGACTGGACTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: ALAGAGQQGPCLGRA*SCSWHCGSRGLDSR Trigger: ACGGGAGTCCAGTCCACGTGAACCACAATGCCAACTACAGCTCAATGCCCTCCCCAGACATGGACCCTGCTGACCGGCGCCAGCCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CAA 90 bp | GGCGGCAGGGTGGGCCTCTGTCGAGGCTTAGGGGTGGGCCGAGATTaGGCTAAAGTGCTTGTAAAGACAGAGGGAGAGGCCAGGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GGRVGLCRGLGVGRD*AKVLVKTEGEARGG Trigger: TCCTCCCCTGGCCTCTCCCTCTGTCTTTACAAGCACTTTAGCCAAATCTCGGCCCACCCCTAAGCCTCGACAGAGGCCCACCCTGCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | GGGCATCGGCTTTGGCACCCGCAGGCTGAAGGCTGCTaGAAAGCCCTGAAGACTTGGAAGTCTGCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: GHRLWHPQAEGC*KALKTWKSAAT Trigger: GGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGCCTTCAGCCTGCGGGTGCCAAAGCCGATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | GCCCCTGCTATGGCGTGGGGGTCAGCCGAGTACTCCTaGACATCCACCACACAGCAGTCCAGAGCAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: APAMAWGSAEYS*TSTTQQSRAAF Trigger: GAAAGCTGCTCTGGACTGCTGTGTGGTGGATGTCCAGGAGTACTCGGCTGACCCCCACGCCATAGCAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | TTGCGTCCCTGGGCAGGGTGTCCCCTGGATGGAACCTaGACTTCCTTTCTGCCCAGACCCTGGCGACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LRPWAGCPLDGT*TSFLPRPWRQF Trigger: GAACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTGCCCAGGGACGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | GGCAGGAGAAAGCTGGCCAGAGGCCATGGAGTAGCCTaGAGGGTAGCTCAGTCCATAGGGGGATGGGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GRRKLARGHGVA*RVAQSIGGWGA Trigger: AGCACCCCATCCCCCTATGGACTGAGCTACCCTCCAGGCTACTCCATGGCCTCTGGCCAGCTTTCTCCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS TCA 72 bp | GGCTTCTCCACCCAGGCCTCCTGCTGGGCTTTGATCTaGGGCAACACAGCCTGCAGCAGTGTCAGCGACTTC | + |
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Preference number: 6 (lower is better) Translates to: GFSTQASCWALI*GNTACSSVSDF Trigger: GAAGTCGCTGACACTGCTGCAGGCTGTGTTGCCTCAGATCAAAGCCCAGCAGGAGGCCTGGGTGGAGAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS TCA 72 bp | GCGCCGGTCAGCAGGGTCCATGTCTGGGGAGGGCATTaGGCTGTAGTTGGCATTGTGGTTCACGTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: APVSRVHVWGGH*AVVGIVVHVDW Trigger: CCAGTCCACGTGAACCACAATGCCAACTACAGCTCAATGCCCTCCCCAGACATGGACCCTGCTGACCGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS GCA 72 bp | CTTGTCGGCCTCTGCTCCCTGCTGACCCTGCAGACATaGGGTGAGCTTCTTGTGTGTGCTGTGGGACACCTG | + |
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Preference number: 6 (lower is better) Translates to: LVGLCSLLTLQT*GELLVCAVGHL Trigger: CAGGTGTCCCACAGCACACACAAGAAGCTCACCGCATGTCTGCAGGGTCAGCAGGGAGCAGAGGCCGACAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 |
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| CDS GCA 72 bp | CTGGAGAAGGTCTTCGCTCAGAACTTCAGTCTTTTCTaGCCAACGACCCGCGCGGACCCAGGAGGGACGCAC | + |
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Preference number: 6 (lower is better) Translates to: LEKVFAQNFSLF*PTTRADPGGTH Trigger: GTGCGTCCCTCCTGGGTCCGCGCGGGTCGTTGGGCAGAAAAGACTGAAGTTCTGAGCGAAGACCTTCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093001.5 |
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| CDS CCA 72 bp | GGAGTAGCCTGGAGGGTAGCTCAGTCCATAGGGGGATaGGGTGCTTGGTGGAGTAGGAGACAGGCTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: GVAWRVAQSIGG*GAWWSRRQADW Trigger: CCAGTCAGCCTGTCTCCTACTCCACCAAGCACCCCATCCCCCTATGGACTGAGCTACCCTCCAGGCTACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CAA 72 bp | GGCGCCGGTCAGCAGGGTCCATGTCTGGGGAGGGCATaGAGCTGTAGTTGGCATTGTGGTTCACGTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: GAGQQGPCLGRA*SCSWHCGSRGL Trigger: CAGTCCACGTGAACCACAATGCCAACTACAGCTCAATGCCCTCCCCAGACATGGACCCTGCTGACCGGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS GCA 72 bp | ATGCTTTCCCCCGGCGACATGCCGTCTAACATGGGGTaGTCTGTGGACTGTGGACTTGAAGCCGACAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MLSPGDMPSNMG*SVDCGLEADRL Trigger: CAGCCTGTCGGCTTCAAGTCCACAGTCCACAGAGCACCCCATGTTAGACGGCATGTCGCCGGGGGAAAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | CCCTGCAGACATGCGGTGAGCTTCTTGTGTGTGCTGTaGGACACCTGCTTCACCAGCTCTAGGCGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PCRHAVSFLCVL*DTCFTSSRRFS Trigger: GGAGAAGCGCCTAGAGCTGGTGAAGCAGGTGTCCCACAGCACACACAAGAAGCTCACCGCATGTCTGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 |
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| CDS GCA 72 bp | AGGCTGCTGGAAAGCCCTGAAGACTTGGAAGTCTGCTaGCACCTGGTCCGGGAAGAGTCCATGTCAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: RLLESPEDLEVC*HLVREESMSST Trigger: GGTGCTTGACATGGACTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTCCAGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS GCA 72 bp | GCAGGATGCTTTCCGACCAGCAGAGGAGCCTCTTCGTaGCACCCAAGATGTGTCCATGACCCTCACACCCAT | + |
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Preference number: 6 (lower is better) Translates to: AGCFPTSRGASS*HPRCVHDPHTH Trigger: ATGGGTGTGAGGGTCATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCTGCTGGTCGGAAAGCATCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CAA 72 bp | CCAAGCACTGCGCCAGAGTCGTCAGAGGCAACTTTTTaGATCGCTTGTCGGCCTCTGCTCCCTGCTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: PSTAPESSEATF*IACRPLLPADP Trigger: AGGGTCAGCAGGGAGCAGAGGCCGACAAGCGATCAAAAAAGTTGCCTCTGACGACTCTGGCGCAGTGCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 |
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| CDS CAA 72 bp | GTGGGCCTCTGTCGAGGCTTAGGGGTGGGCCGAGATTaGGCTAAAGTGCTTGTAAAGACAGAGGGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VGLCRGLGVGRD*AKVLVKTEGEA Trigger: GGCCTCTCCCTCTGTCTTTACAAGCACTTTAGCCAAATCTCGGCCCACCCCTAAGCCTCGACAGAGGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS GCA 72 bp | CAGGGTGTCCCCTGGATGGAACCTGGACTTCCTTTCTaGCCAGACCCTGGCGACAGTTCCTTGCTTTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: QGVPWMEPGLPF*PDPGDSSLLLD Trigger: GTCTAAAAGCAAGGAACTGTCGCCAGGGTCTGGGCAGAAAGGAAGTCCAGGTTCCATCCAGGGGACACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | TGGAAAGCCCTGAAGACTTGGAAGTCTGCTGCCACCTaGTCCGGGAAGAGTCCATGTCAAGCACCAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WKALKTWKSAAT*SGKSPCQAPAW Trigger: CCAAGCTGGTGCTTGACATGGACTCTTCCCGGACCAGGTGGCAGCAGACTTCCAAGTCTTCAGGGCTTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | CAGGGTCCATGTCTGGGGAGGGCATTGAGCTGTAGTTaGCATTGTGGTTCACGTGGACTGGACTCCCGTAAC | + |
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Preference number: 6 (lower is better) Translates to: QGPCLGRALSCS*HCGSRGLDSRN Trigger: GTTACGGGAGTCCAGTCCACGTGAACCACAATGCCAACTACAGCTCAATGCCCTCCCCAGACATGGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CAA 72 bp | CAGTCCCTGGCTGCACGAAGGGGACCTTGGGAGGAATaGGTGCCACCTTCTTTGAAACTTTCCGGAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QSLAARRGPWEE*VPPSLKLSGGC Trigger: ACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGCAGCCAGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | CTCAGAACTTCAGTCTTTTCTGCCCTGCCCACCGTCTaGTTGGCCAACTGGCGCATGCGGTTAAACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LRTSVFSALPTV*LANWRMRLNCF Trigger: GAAGCAGTTTAACCGCATGCGCCAGTTGGCCAACCAGACGGTGGGCAGGGCAGAAAAGACTGAAGTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 |
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| CDS CAA 90 bp | GATCTGAAACAGTCCCTGGCTGCACGAAGGGGACCTTGGGAGGAATaGGTGCCACCTTCTTTGAAACTTTCCGGAGGGTGTGAGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: DLKQSLAARRGPWEE*VPPSLKLSGGCEDS Trigger: AGAGTCCTCACACCCTCCGGAAAGTTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGCAGCCAGGGACTGTTTCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS TCA 72 bp | GGAAACTGTGGTCATCATCTCGGTGATGTTCCCCTCTaGCTGTGGCCAAAGGAGATTGGGTCCCAGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: GNCGHHLGDVPL*LWPKEIGSQDN Trigger: ATTGTCCTGGGACCCAATCTCCTTTGGCCACAGTCAGAGGGGAACATCACCGAGATGATGACCACAGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS TCA 72 bp | CAACGATCTGCAGGGAAACTGTGGTCATCATCTCGGTaGTGTTCCCCTCTGACTGTGGCCAAAGGAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: QRSAGKLWSSSR*CSPLTVAKGDW Trigger: CCAATCTCCTTTGGCCACAGTCAGAGGGGAACATCACCGAGATGATGACCACAGTTTCCCTGCAGATCGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS TCA 72 bp | CAGAGGAGCCTCTTCGTGCCACCCAAGATGTGTCCATaGCCCTCACACCCATGCCATCCTTCTTGTAAAACT | + |
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Preference number: 6 (lower is better) Translates to: QRSLFVPPKMCP*PSHPCHPSCKT Trigger: AGTTTTACAAGAAGGATGGCATGGGTGTGAGGGTCATGGACACATCTTGGGTGGCACGAAGAGGCTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047463.15 |
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| CDS GCA 72 bp | GCGTGCTGGATAATGGGCTCGATGATGCCAACGATCTaGAGGGAAACTGTGGTCATCATCTCGGTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: ACWIMGSMMPTI*RETVVIISVMF Trigger: GAACATCACCGAGATGATGACCACAGTTTCCCTGCAGATCGTTGGCATCATCGAGCCCATTATCCAGCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | GATCTGAAACAGTCCCTGGCTGCACGAAGGGGACCTTaGGAGGAATTGGTGCCACCTTCTTTGAAACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: DLKQSLAARRGP*EELVPPSLKLS Trigger: GGAAAGTTTCAAAGAAGGTGGCACCAATTCCTCCCAAGGTCCCCTTCGTGCAGCCAGGGACTGTTTCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CAA 72 bp | CACCCAAGATGTGTCCATGACCCTCACACCCATGCTTaGGATTTTCCTAAGGCCATCCTTCTTGTAAAACTC | + |
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Preference number: 6 (lower is better) Translates to: HPRCVHDPHTHA*DFPKAILLVKL Trigger: GAGTTTTACAAGAAGGATGGCCTTAGGAAAATCCAAAGCATGGGTGTGAGGGTCATGGACACATCTTGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | ACCTGGTCCGGGAAGAGTCCATGTCAAGCACCAGCTTaGCTAAATGTTTCCTCTGCTTTTGAATATTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TWSGKSPCQAPA*LNVSSAFEYLE Trigger: TTCCAAATATTCAAAAGCAGAGGAAACATTTAGCCAAGCTGGTGCTTGACATGGACTCTTCCCGGACCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047463.15 ENSMUST00000093001.5 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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| CDS CCA 72 bp | TTCGATAAAAATTTGATCAAGTATTTGATGTTGTTATaGTTGGCCTTGGGCAACTTCTCACAAGCATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FDKNLIKYLMLL*LALGNFSQAFQ Trigger: CTGGAATGCTTGTGAGAAGTTGCCCAAGGCCAACCATAACAACATCAAATACTTGATCAAATTTTTATCGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047463.15 ENSMUST00000093002.12 ENSMUST00000130420.8 |
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