Pregenerated sensors for ARHGAP42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050730Ensembl transcript IDs: ENSMUST00000093893.12, ENSMUST00000183182.2, ENSMUST00000215397.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTaGTTTAGCTCACAGACAACTGGGAGTCAGGAATGCTGGGATCTA | + |
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Preference number: 1 (lower is better) Translates to: HTHVLLSSKSPVSIC*FSSQTTGSQECWDL Trigger: TAGATCCCAGCATTCCTGACTCCCAGTTGTCTGTGAGCTAAACCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR TCA 90 bp | AAGGAGCCAAACTTTTATCAGTTACCTATCATGTCATTGTCTTTATaGGACAGCCAATGCATTCAGTTCACTGCTGTAATTTCTGGATGC | + |
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Preference number: 1 (lower is better) Translates to: KEPNFYQLPIMSLSL*DSQCIQFTAVISGC Trigger: GCATCCAGAAATTACAGCAGTGAACTGAATGCATTGGCTGTCTCATAAAGACAATGACATGATAGGTAACTGATAAAAGTTTGGCTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR GCA 90 bp | TATCATGTCATTGTCTTTATGAGACAGCCAATGCATTCAGTTCACTaGTGTAATTTCTGGATGCATCTGTCTGTCAACTGTTACTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: YHVIVFMRQPMHSVH*CNFWMHLSVNCYSL Trigger: TAGAGAGTAACAGTTGACAGACAGATGCATCCAGAAATTACAGCAGTGAACTGAATGCATTGGCTGTCTCATAAAGACAATGACATGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR CCA 90 bp | GTCTTTATGAGACAGCCAATGCATTCAGTTCACTGCTGTAATTTCTaGATGCATCTGTCTGTCAACTGTTACTCTCTACACATTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: VFMRQPMHSVHCCNF*MHLSVNCYSLHINS Trigger: AGAATTAATGTGTAGAGAGTAACAGTTGACAGACAGATGCATCCAGAAATTACAGCAGTGAACTGAATGCATTGGCTGTCTCATAAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR CCA 90 bp | TCACATCACATCACAAGCAAGGAGATAATGCTTCTTCACACTGCATaGACACTGGAGAGATTGAAAGTTTATTGTACTTTTCAGATACTG | + |
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Preference number: 1 (lower is better) Translates to: SHHITSKEIMLLHTA*TLERLKVYCTFQIL Trigger: CAGTATCTGAAAAGTACAATAAACTTTCAATCTCTCCAGTGTCCATGCAGTGTGAAGAAGCATTATCTCCTTGCTTGTGATGTGATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR TCA 90 bp | AGAAATATAAAGTATATCTTTTATAGCTTTAACCCACCATCTCTCTaGCAAAGTCTTTCCGCAATGGGGCTATTGGTGAATATTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RNIKYIFYSFNPPSL*QSLSAMGLLVNISV Trigger: GACTGAAATATTCACCAATAGCCCCATTGCGGAAAGACTTTGTCAGAGAGATGGTGGGTTAAAGCTATAAAAGATATACTTTATATTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | CACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCAATCGCAAGCACAAGTaGAACATGAACCAGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: HLNALLSSTPSMHSRAQINRKHK*NMNQHV Trigger: AACATGCTGGTTCATGTTGCACTTGTGCTTGCGATT...GATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | CACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCAGAGAGATAACTCAGTaGTTAGAAGCACTTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLNALLSSTPSMHSRAQIREITQ*LEALVA Trigger: GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCT...GATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR TCA 90 bp | CACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCAACGAGAGAAAACATTaGAGACGTCAGCTAGATAAC | + |
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Preference number: 2 (lower is better) Translates to: HLNALLSSTPSMHSRAQINERKH*RRQLDN Trigger: GTTATCTAGCTGACGTCTTCAATGTTTTCTCTCGTT...GATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | CACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCGCTGTAATTTCTGGATaGATCTGTCTGTCAACTGTT | + |
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Preference number: 2 (lower is better) Translates to: HLNALLSSTPSMHSRAQIAVISG*ICLSTV Trigger: AACAGTTGACAGACAGATGCATCCAGAAATTACAGC...GATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR CAA 90 bp | TATACAAGAGTATCCGAGGCCCAAACTTCCCCATCATTAAAATACTaGGAGGCATTTCAAGTGGGCAGGCTGCATGCTACACCACATCCT | + |
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Preference number: 2 (lower is better) Translates to: YTRVSEAQTSPSLKY*EAFQVGRLHATPHP Trigger: AGGATGTGGTGTAGCATGCAGCCTGCCCACTTGAAATGCCTCCAAGTATTTTAATGATGGGGAAGTTTGGGCCTCGGATACTCTTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR TCA 90 bp | CACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCGAGAGAGCAGACTGTTaGAAATCACTTCTTATTCAA | + |
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Preference number: 2 (lower is better) Translates to: HLNALLSSTPSMHSRAQIERADC*KSLLIQ Trigger: TTGAATAAGAAGTGATTTTCAACAGTCTGCTCTCTC...GATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR TCA 90 bp | GGATTTCATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTGGTCTCTTCAGGGGTTCTaGTCTAACACTATGCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GFHTHVLLSSKSPVSICWSLQGF*SNTMRR Trigger: CCTTCGCATAGTGTTAGATCAGAACCCCTGAAGAGA...CCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATGAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGAGCAGGGTGAAGTGTGACAGAGAAATGGAGGACAGCATAAAAGCAAAAATGGATTTGTCTATGTaGGGAAGGGAGAATATAGCG | + |
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Preference number: 2 (lower is better) Translates to: RGSRVKCDREMEDSIKAKMDLSM*GRENIA Trigger: CGCTATATTCTCCCTTCCTCACATAGACAAATCCAT...TTTTGCTTTTATGCTGTCCTCCATTTCTCTGTCACACTTCACCCTGCTCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAACAATGCTTTTATCATTTATACAAGAGTATCCGAGGCCCAAACTTCCCCAAGTGGGCAGGCTGCATaGTACACCACATCCTTACAG | + |
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Preference number: 2 (lower is better) Translates to: ANNAFIIYTRVSEAQTSPSGQAA*YTTSLQ Trigger: CTGTAAGGATGTGGTGTAGCATGCAGCCTGCCCACT...TGGGGAAGTTTGGGCCTCGGATACTCTTGTATAAATGATAAAAGCATTGTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGTGGTCTGGGGCTAGAGAGATAACTCAGTGGTTAGAAGCACTTGTTGCCCTGACTTCCATATTTTaGGTATGCAGAATTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: TLWSGAREITQWLEALVALTSIF*VCRIEL Trigger: GAGCTCAATTCTGCATACCCAAAATATGGAAGTCAG...GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCTAGCCCCAGACCACAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGGTTGGGATTTCTCTGTaGATCAGCAGTGGACGAAGA | + |
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Preference number: 2 (lower is better) Translates to: IAKNHLPNASVFQTQGYLVGISL*ISSGRR Trigger: TCTTCGTCCACTGCTGATGCACAGAGAAATCCCAAC...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | ATGGGGCTATTGGTGAATATTTCAGTCCTGCCTATAACACATCACATCACATCACCAGCACACCTTCCATaGACTCCAGAGCACAAATCT | + |
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Preference number: 2 (lower is better) Translates to: MGLLVNISVLPITHHITSPAHLP*TPEHKS Trigger: AGATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGG...TGATGTGATGTGATGTGTTATAGGCAGGACTGAAATATTCACCAATAGCCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | GGATTTCATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTGGCACTGCTGTAATTTCTaGATGCATCTGTCTGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: GFHTHVLLSSKSPVSICWHCCNF*MHLSVN Trigger: GTTGACAGACAGATGCATCCAGAAATTACAGCAGTG...CCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATGAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGAAGGCTATGGCTGGATaGCATAGAAGAAAACCTTGC | + |
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Preference number: 2 (lower is better) Translates to: IAKNHLPNASVFQTQGYLKAMAG*HRRKPC Trigger: GCAAGGTTTTCTTCTATGGCATCCAGCCATAGCCTT...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGTTTCTCTTTCCGTCATaGGAGCTACAAAGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IAKNHLPNASVFQTQGYLFLFPS*ELQSLL Trigger: CAGCAGACTTTGTAGCTCCCATGACGGAAAGAGAAA...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | AAGCTAGTCTCCAAAGTCCAAATGCCGAATGGATTTGTCTATGTGAGGAAGGGAAATATAGCGCAATTGTaGAGAAGAAGGGTTTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: KLVSKVQMPNGFVYVRKGNIAQL*RRRVCS Trigger: TGAACAAACCCTTCTTCTCCACAATTGCGCTATATT...TCCCTTCCTCACATAGACAAATCCATTCGGCATTTGGACTTTGGAGACTAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGATCTACCTCCCTTTTCTaGCTTTCATGGGTAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRSTSLF*LSWVKG Trigger: GCCTTTTACCCATGAAAGTCAGAAAAGGGAGGTAGA...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | ATGGGGCTATTGGTGAATATTTCAGTCCTGCCTATAACACATCACATCACATCATCTGATCTAACACTATaGGAAGGGCTTCAACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MGLLVNISVLPITHHITSSDLTL*EGLQQK Trigger: TTTCTGTTGAAGCCCTTCGCATAGTGTTAGATCAGA...TGATGTGATGTGATGTGTTATAGGCAGGACTGAAATATTCACCAATAGCCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGCTATTGGTGAATATTTCAGTCCTGCCTATAACACATCACATCACATCACCAAATGAAGTGGGATaGCAGAATAGCCAAAAATCA | + |
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Preference number: 2 (lower is better) Translates to: MGLLVNISVLPITHHITSPNEVG*QNSQKS Trigger: TGATTTTTGGCTATTCTGCCATCCCACTTCATTTGG...TGATGTGATGTGATGTGTTATAGGCAGGACTGAAATATTCACCAATAGCCCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGAATCAGAAAGCAGAGCTaGATTTCATACCCATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRIRKQS*ISYPCP Trigger: AGGACATGGGTATGAAATCCAGCTCTGCTTTCTGAT...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR TCA 90 bp | TTCATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAATTGGGTATGCAGAATTaGGCTCAGGATCTAAGATTC | + |
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Preference number: 2 (lower is better) Translates to: FISVVLLHTLTLGYLIQELGMQN*AQDLRF Trigger: GAATCTTAGATCCTGAGCTCAATTCTGCATACCCAA...TTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR TCA 90 bp | TTCATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAAGTGGACGAAGATATTaGATCTTTACTGTCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FISVVLLHTLTLGYLIQESGRRY*IFTVKL Trigger: CAGCTTGACAGTAAAGATTCAATATCTTCGTCCACT...TTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR GCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGAATGCATTCAGTTCACTaGTGTAATTTCTGGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRMHSVH*CNFWMH Trigger: ATGCATCCAGAAATTACAGCAGTGAACTGAATGCAT...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR CAA 90 bp | TTGTGTGTGCATAAAGCATGTCTGTTCACCAATGTTTATATCTCATaGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTATCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LCVHKACLFTNVYIS*FPKAKSRSNLVSFG Trigger: ACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGATATAAACATTGGTGAACAGACATGCTTTATGCACACACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGAAAGAATCGAGTACTTTaGTATTTGTTTCCTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRKNRVL*YLFPVS Trigger: GGAAACAGGAAACAAATACCAAAGTACTCGATTCTT...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | CACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCCCATCATTAAAATACTaGGAGGCATTTCAAGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: HLNALLSSTPSMHSRAQIPSLKY*EAFQVG Trigger: GCCCACTTGAAATGCCTCCAAGTATTTTAATGATGG...GATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR GCA 72 bp | TGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTaGAGAGCACACCCAAGGGAATTACATCAACCCCCA | + |
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Preference number: 3 (lower is better) Translates to: CQTHQCFKPKDT*RAHPRELHQPP Trigger: TGGGGGTTGATGTAATTCCCTTGGGTGTGCTCTGCAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | TCACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCAAAGCCTGATTTTCTaGAAATGTTTAGGACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SPQCSPVQHTFHALQSTNQSLIF*KCLGPA Trigger: TGCTGGTCCTAAACATTTCAAGAAAATCAGGCTTTG...ATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | AGGGGGAGCAGGGTGAAGTGTGACAGAGAAATGGAGGACAGCATAAAAGCAAAAGAGAATATAGCGCAATaGTGGAGAAGAAGGGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: RGSRVKCDREMEDSIKAKENIAQ*WRRRVC Trigger: ACAAACCCTTCTTCTCCACAATTGCGCTATATTCTC...TTTTGCTTTTATGCTGTCCTCCATTTCTCTGTCACACTTCACCCTGCTCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| 3UTR CCA 72 bp | GCAGTGGACGAAGATATTGAATCTTTACTGTCAAGCTaGTCTTTGAGAGCAAACCAGCTTCTCTTCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: AVDEDIESLLSS*SLRANQLLFRG Trigger: ACCCCTGAAGAGAAGCTGGTTTGCTCTCAAAGACCAGCTTGACAGTAAAGATTCAATATCTTCGTCCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | GGATTTCATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTGGCATCGATGCACAACGTaGTATGTATACTCTGCTTAT | + |
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Preference number: 3 (lower is better) Translates to: GFHTHVLLSSKSPVSICWHRCTT*YVYSAY Trigger: ATAAGCAGAGTATACATACAACGTTGTGCATCGATG...CCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATGAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR CCA 72 bp | AGACAGCCAATGCATTCAGTTCACTGCTGTAATTTCTaGATGCATCTGTCTGTCAACTGTTACTCTCTACAC | + |
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Preference number: 3 (lower is better) Translates to: RQPMHSVHCCNF*MHLSVNCYSLH Trigger: GTGTAGAGAGTAACAGTTGACAGACAGATGCATCCAGAAATTACAGCAGTGAACTGAATGCATTGGCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | GGATTTCATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTGGCGAGTACTTTGGTATTaGTTTCCTGTTTCCACTAAA | + |
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Preference number: 3 (lower is better) Translates to: GFHTHVLLSSKSPVSICWRVLWY*FPVSTK Trigger: TTTAGTGGAAACAGGAAACAAATACCAAAGTACTCG...CCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATGAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR TCA 72 bp | TTAGAAGCACTTGTTGCCCTTCATGAGGACCCAATTTaGAGTCCTATTTGTAACTCAGTAGCCTCTGTAACT | + |
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Preference number: 3 (lower is better) Translates to: LEALVALHEDPI*SPICNSVASVT Trigger: AGTTACAGAGGCTACTGAGTTACAAATAGGACTTCAAATTGGGTCCTCATGAAGGGCAACAAGTGCTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR GCA 72 bp | AATTCAGTGGAATTCATAGGAAAGGCTATGGCTGGATaGCATAGAAGAAAACCTTGCAAATCTCACTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: NSVEFIGKAMAG*HRRKPCKSHSC Trigger: ACAGGAGTGAGATTTGCAAGGTTTTCTTCTATGGCATCCAGCCATAGCCTTTCCTATGAATTCCACTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | AAGAAAGCTAGTCTCCAAAGTCCAAATGCCGAATGGATTTGTCTATGTGAGGAAGTGGAGAAGAAGGGTTaGTTCAATGAAGAGAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: KKASLQSPNAEWICLCEEVEKKG*FNEESF Trigger: GAAACTCTCTTCATTGAACAAACCCTTCTTCTCCAC...TTCCTCACATAGACAAATCCATTCGGCATTTGGACTTTGGAGACTAGCTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| 3UTR GCA 72 bp | AGCCAATGCATTCAGTTCACTGCTGTAATTTCTGGATaGATCTGTCTGTCAACTGTTACTCTCTACACATTA | + |
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Preference number: 3 (lower is better) Translates to: SQCIQFTAVISG*ICLSTVTLYTL Trigger: TAATGTGTAGAGAGTAACAGTTGACAGACAGATGCATCCAGAAATTACAGCAGTGAACTGAATGCATTGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGATTTGGGTATGCAGAATaGAGCTCAGGATCTAAGATT | + |
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Preference number: 3 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRFGYAE*SSGSKI Trigger: AATCTTAGATCCTGAGCTCAATTCTGCATACCCAAA...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR TCA 72 bp | AAGGGAATTACATCAACCCCCAAGACATCCTCACATTaGTCAAACTATAGGCATTTATTTGGGTGTATATTG | + |
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Preference number: 3 (lower is better) Translates to: KGITSTPKTSSH*SNYRHLFGCIL Trigger: CAATATACACCCAAATAAATGCCTATAGTTTGATCAATGTGAGGATGTCTTGGGGGTTGATGTAATTCCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR CCA 72 bp | ATCACAAGCAAGGAGATAATGCTTCTTCACACTGCATaGACACTGGAGAGATTGAAAGTTTATTGTACTTTT | + |
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Preference number: 3 (lower is better) Translates to: ITSKEIMLLHTA*TLERLKVYCTF Trigger: AAAAGTACAATAAACTTTCAATCTCTCCAGTGTCCATGCAGTGTGAAGAAGCATTATCTCCTTGCTTGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| 3UTR-3UTR CAA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGAGTTAATGACGATGGCTaGTTTGCTTTTAAACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRVNDDG*FAFKLC Trigger: ACAGAGTTTAAAAGCAAACAAGCCATCGTCATTAAC...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| 3UTR CCA 72 bp | TCTCATTGTTCCCAAAAGCCAAAAGTAGAAGTAATCTaGTATCATTTGGTGAAGGATAAATCTGTAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHCSQKPKVEVI*YHLVKDKSVSV Trigger: CACACTTACAGATTTATCCTTCACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| 3UTR GCA 72 bp | GGTTATTCATCTGTGCTTCACAAGTCAAATCTAGCCTaGAACAAATTATTTACTTACAGGCTTTATAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: GYSSVLHKSNLA*NKLFTYRLYRL Trigger: AAGTCTATAAAGCCTGTAAGTAAATAATTTGTTGCAGGCTAGATTTGACTTGTGAAGCACAGATGAATAACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | TCACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATGCGTGTACCTCCCTCTaGGCTTCCGAGAACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQCSPVQHTFHALQSTNACTSL*ASENLW Trigger: CCACAGGTTCTCGGAAGCCCAGAGGGAGGTACACGC...ATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR TCA 90 bp | TCACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATCTGTCCATTGGAAGATaGTGGGGTTGTGATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQCSPVQHTFHALQSTNLSIGR*WGCDPG Trigger: CCCTGGATCACAACCCCATCATCTTCCAATGGACAG...ATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR TCA 90 bp | TCACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATAAGATGATGGGGTTGTaGTCCAGGGAATTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPQCSPVQHTFHALQSTNKMMGL*SREFLL Trigger: CAGGAGGAATTCCCTGGATCACAACCCCATCATCTT...ATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | ACTCTGTGGTCTGGGGCTAGAGAGATAACTCAGTGGTTAGAAGCACTTGTTGCCCACAGTTTCCTCCTGTaGTCTCATCAGGGTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLWSGAREITQWLEALVAHSFLL*SHQGWT Trigger: GGTCCAACCCTGATGAGAGCACAGGAGGAAACTGTG...GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCTAGCCCCAGACCACAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | GGATTTCATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTGGCATGGGAGTGCTGTCTaGGCTGCTGCTGTAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFHTHVLLSSKSPVSICWHGSAV*AAAVGV Trigger: GACTCCTACAGCAGCAGCCCAGACAGCACTCCCATG...CCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATGAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | TCACCTCAATGCTCTCCTGTCCAGCACACCTTCCATGCACTCCAGAGCACAAATATAGAGGCCACACTCTaGCAATCTGACTCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQCSPVQHTFHALQSTNIEATL*QSDSTS Trigger: AGATGTGGAGTCAGATTGCCAGAGTGTGGCCTCTAT...ATTTGTGCTCTGGAGTGCATGGAAGGTGTGCTGGACAGGAGAGCATTGAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| 3UTR CAA 72 bp | CTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTaGCAGAGCACACCCAAGGGAATTACATCAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPNASVFQTQGY*QSTPKGITSTP Trigger: GGGGGTTGATGTAATTCCCTTGGGTGTGCTCTGCAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR TCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGTTCTCAGCGCCCCGATaGGCAGAGAGCCATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IAKNHLPNASVFQTQGYLFSAPR*AESHPS Trigger: TGAAGGATGGCTCTCTGCTCATCGGGGCGCTGAGAA...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGCTCCTGACTTCTCCCTaGGCTGGCAGGCAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: IAKNHLPNASVFQTQGYLLLTSP*AGRQWI Trigger: AATCCACTGCCTGCCAGCCCAGGGAGAAGTCAGGAG...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | GCAAACAATGCTTTTATCATTTATACAAGAGTATCCGAGGCCCAAACTTCCCCAGTCGCTGGTAGCCATTaGTGGAGGCAGTGTCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ANNAFIIYTRVSEAQTSPVAGSH*WRQCLA Trigger: GGCTAGACACTGCCTCCAGCAATGGCTACCAGCGAC...TGGGGAAGTTTGGGCCTCGGATACTCTTGTATAAATGATAAAAGCATTGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | ACTCTGTGGTCTGGGGCTAGAGAGATAACTCAGTGGTTAGAAGCACTTGTTGCCCCACTTCTTGCCGAGTaGTTTCAAAGTTATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLWSGAREITQWLEALVAPLLAE*FQSYSL Trigger: CAAGGAATAACTTTGAAAGCACTCGGCAAGAAGTGG...GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCTAGCCCCAGACCACAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | ACTCTGTGGTCTGGGGCTAGAGAGATAACTCAGTGGTTAGAAGCACTTGTTGCCAGTCTCTCCACTTCTTaGCGAGTGCTTTCAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLWSGAREITQWLEALVASLSTS*RVLSKL Trigger: TAACTTTGAAAGCACTCGGCAAGAAGTGGAGAGACT...GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCTAGCCCCAGACCACAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | GGATTTCATACCCATGTCCTACTAAGCTCTAAGTCCCCAGTAAGCATCTGTTGGTTTTGTTCAGAGGAGTaGGAGGAGAGCGACTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: GFHTHVLLSSKSPVSICWFCSEE*EESDSM Trigger: CATAGAGTCGCTCTCCTCCCACTCCTCTGAACAAAA...CCAACAGATGCTTACTGGGGACTTAGAGCTTAGTAGGACATGGGTATGAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | ATGGGGCTATTGGTGAATATTTCAGTCCTGCCTATAACACATCACATCACATCACGTTCATCTTCCCACTaGCTTTCACATCGGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: MGLLVNISVLPITHHITSRSSSH*LSHRRR Trigger: GCGTCTCCGATGTGAAAGCCAGTGGGAAGATGAACG...TGATGTGATGTGATGTGTTATAGGCAGGACTGAAATATTCACCAATAGCCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR TCA 90 bp | ATATCTCATTGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTATCATTTGGTGTTCTCAGCGCCCCGATaGGCAGAGAGCCATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISHCSQKPKVEVIWYHLVFSAPR*AESHPS Trigger: TGAAGGATGGCTCTCTGCTCATCGGGGCGCTGAGAA...CACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| 3UTR CAA 72 bp | AACCTTGCAAATCTCACTCCTGTTAATGACGATGGCTaGTTTGCTTTTAAACTCTGTGGTCTGGGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLANLTPVNDDG*FAFKLCGLGLE Trigger: CTCTAGCCCCAGACCACAGAGTTTAAAAGCAAACAAGCCATCGTCATTAACAGGAGTGAGATTTGCAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | ACTCTGTGGTCTGGGGCTAGAGAGATAACTCAGTGGTTAGAAGCACTTGTTGCCTTCATCATCAGTTTCTaGATCTCCAATACACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLWSGAREITQWLEALVAFIISF*ISNTLK Trigger: TTTGAGTGTATTGGAGATGCAGAAACTGATGATGAA...GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCTAGCCCCAGACCACAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAAGGAGAGCGACTCTATaGTGCCCATGGGAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FISVVLLHTLTLGYLIQERRATL*CPWECC Trigger: ACAGCACTCCCATGGGCAGCATAGAGTCGCTCTCCT...TTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGAAGTCTTGCAGAGACTaGGAAAACTTCTGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAKNHLPNASVFQTQGYLKSCRD*ENFCTA Trigger: GGCTGTACAGAAGTTTTCCCAGTCTCTGCAAGACTT...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | GCAAACAATGCTTTTATCATTTATACAAGAGTATCCGAGGCCCAAACTTCCCCATTTTGGAGGCAGCTCTaGGTTTGGTATGGCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANNAFIIYTRVSEAQTSPFWRQL*VWYGFR Trigger: CCTAAAGCCATACCAAACCCAGAGCTGCCTCCAAAA...TGGGGAAGTTTGGGCCTCGGATACTCTTGTATAAATGATAAAAGCATTGTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR TCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGATTCTCGGCCAATCTGTaGATCTGCTTTAGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRFSANL*ICFSCT Trigger: GGTGCAGCTAAAGCAGATTCACAGATTGGCCGAGAA...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR TCA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGATCTTCTCGAGAACTTaGTTCTGGACTAGTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IAKNHLPNASVFQTQGYLIFSRT*FWTSCP Trigger: TGGACAACTAGTCCAGAATCAAGTTCTCGAGAAGAT...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGACAATTTGTGTACCAGTaGATGGACTGCCTCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRQFVYQ*MDCLHP Trigger: AGGGTGGAGGCAGTCCATGCACTGGTACACAAATTG...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGTCTCCAAAGTCCAAATGCCGAATGGATTTGTCTATGTGAGGAAGGGAGCAGTCAAGAGAATTTaGTGTTCTTGCAGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KLVSKVQMPNGFVYVRKGAVKRI*CSCRKL Trigger: CAGTTTTCTGCAAGAACAGCAAATTCTCTTGACTGC...TCCCTTCCTCACATAGACAAATCCATTCGGCATTTGGACTTTGGAGACTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGGCTATTGGTGAATATTTCAGTCCTGCCTATAACACATCACATCACATCACCAATACACTCAAACTaGAAGTCTTGCAGAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGLLVNISVLPITHHITSPIHSN*KSCRDW Trigger: CCAGTCTCTGCAAGACTTCCAGTTTGAGTGTATTGG...TGATGTGATGTGATGTGTTATAGGCAGGACTGAAATATTCACCAATAGCCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTGAAGAAAGCTAGTCTCCAAAGTCCAAATGCCGAATGGATTTGTCTACCAATACACTCAAACTaGAAGTCTTGCAGAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVKKASLQSPNAEWICLPIHSN*KSCRDW Trigger: CCAGTCTCTGCAAGACTTCCAGTTTGAGTGTATTGG...TAGACAAATCCATTCGGCATTTGGACTTTGGAGACTAGCTTTCTTCACAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| 3UTR CAA 72 bp | GTAGTCAGGCTACTGGTGCGTTATAAAAGCTACCTTTaGTCTCAGAAAATGGTTACCAGAGACAGGAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVRLLVRYKSYL*SQKMVTRDRNV Trigger: AACATTCCTGTCTCTGGTAACCATTTTCTGAGACAAAAGGTAGCTTTTATAACGCACCAGTAGCCTGACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGCTAGTCTCCAAAGTCCAAATGCCGAATGGATTTGTCTATGTGAGGAACAGAAAACTGGAATATaGTTCCGACCATCAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKASLQSPNAEWICLCEEQKTGI*FRPSSS Trigger: GCTACTTGATGGTCGGAACCATATTCCAGTTTTCTG...TTCCTCACATAGACAAATCCATTCGGCATTTGGACTTTGGAGACTAGCTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGACGGAGACGCTCATTGTaGACATTTTGCTTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRRRRSL*TFCFLC Trigger: ACAAAGGAAGCAAAATGTTCACAATGAGCGTCTCCG...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | ATATCTCATTGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTATCATTTGGTGAACTCTACTGTCTTCTaGTCTCCTTGGGCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ISHCSQKPKVEVIWYHLVNSTVF*SPWALT Trigger: TGTGAGTGCCCAAGGAGACCAGAAGACAGTAGAGTT...CACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR CCA 90 bp | TTTAACTCAAAAATAGTACTCCATCTTAGGAAAGCAGGGACTCTGGCCCATATTGTTCTTGCAGAAAACTaGAATATGGTTCCGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: FNSKIVLHLRKAGTLAHIVLAEN*NMVPTI Trigger: GATGGTCGGAACCATATTCCAGTTTTCTGCAAGAAC...AATATGGGCCAGAGTCCCTGCTTTCCTAAGATGGAGTACTATTTTTGAGTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAATGGTATGGCTTTAGGTaGCTCTTTGGAGCCTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FISVVLLHTLTLGYLIQEWYGFR*LFGAYR Trigger: TCTATAGGCTCCAAAGAGTCACCTAAAGCCATACCA...TTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CCA 90 bp | ATATCTCATTGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTATCATTTGGTGAAGTCTTGCAGAGACTaGGAAAACTTCTGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISHCSQKPKVEVIWYHLVKSCRD*ENFCTA Trigger: GGCTGTACAGAAGTTTTCCCAGTCTCTGCAAGACTT...CACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| 3UTR CAA 72 bp | CAGACTTTGTGGTCTAAGAATCGAGTACTTTGGTATTaGTTTCCTGTTTCCACTAAAAAGGGTTTAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTLWSKNRVLWY*FPVSTKKGLED Trigger: GTCTTCTAAACCCTTTTTAGTGGAAACAGGAAACAAATACCAAAGTACTCGATTCTTAGACCACAAAGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR GCA 90 bp | TTTAACTCAAAAATAGTACTCCATCTTAGGAAAGCAGGGACTCTGGCCCATATTTTCATCATCAGTTTCTaGATCTCCAATACACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FNSKIVLHLRKAGTLAHIFIISF*ISNTLK Trigger: TTTGAGTGTATTGGAGATGCAGAAACTGATGATGAA...AATATGGGCCAGAGTCCCTGCTTTCCTAAGATGGAGTACTATTTTTGAGTTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR GCA 90 bp | CATTGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTATCATTTGGTGAAGGATAGAATTTGCTGTTCTTaGAGAAAACTGGAATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSQKPKVEVIWYHLVKDRICCS*RKLEYG Trigger: ACCATATTCCAGTTTTCTGCAAGAACAGCAAATTCT...ATCCTTCACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| 3UTR CAA 72 bp | AGACATCCTCACATTGATCAAACTATAGGCATTTATTaGGGTGTATATTGTAGCTTTCAGAGTGTACATATG | + |
|
Preference number: 4 (lower is better) Translates to: RHPHIDQTIGIY*GVYCSFQSVHM Trigger: CATATGTACACTCTGAAAGCTACAATATACACCCAAATAAATGCCTATAGTTTGATCAATGTGAGGATGTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| 3UTR CAA 72 bp | CATAAAGCATGTCTGTTCACCAATGTTTATATCTCATaGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HKACLFTNVYIS*FPKAKSRSNLV Trigger: TACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGATATAAACATTGGTGAACAGACATGCTTTATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTGTGGTCTGGGGCTAGAGAGATAACTCAGTGGTTAGAAGCACTTGTTGCCGGCAGGCAGTGGATTTaGTGGTGCTGTTTTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLWSGAREITQWLEALVAGRQWI*WCCFVQ Trigger: CTGAACAAAACAGCACCACAAAATCCACTGCCTGCC...GGCAACAAGTGCTTCTAACCACTGAGTTATCTCTCTAGCCCCAGACCACAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS CCA 90 bp | GTTTCTGCATCTCCAATACACTCAAACTGGAAGTCTTGCAGAGACTaGGAAAACTTCTGTACAGCCATGGACAGATTTCTCAGCGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VSASPIHSNWKSCRD*ENFCTAMDRFLSAP Trigger: CGGGGCGCTGAGAAATCTGTCCATGGCTGTACAGAAGTTTTCCCAGTCTCTGCAAGACTTCCAGTTTGAGTGTATTGGAGATGCAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093893.12 ENSMUST00000183182.2 ENSMUST00000215397.2 |
||
| CDS GCA 90 bp | AGCTTCCGGTTAGCTTCAGAGAATGCCTGTAGCGTAATGATGCCATaGCTTTCGACCACTTCTATGTCAAAGCAGAAGCGCTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFRLASENACSVMMP*LSTTSMSKQKRLSM Trigger: CATTGACAAGCGCTTCTGCTTTGACATAGAAGTGGTCGAAAGGCATGGCATCATTACGCTACAGGCATTCTCTGAAGCTAACCGGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CAA 90 bp | GCAAACAATGCTTTTATCATTTATACAAGAGTATCCGAGGCCCAAACTTCCCCATTTTGTGGTGCTGTTTaGTTCAGAGGAGTGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ANNAFIIYTRVSEAQTSPFCGAV*FRGVGG Trigger: TCCTCCCACTCCTCTGAACAAAACAGCACCACAAAA...TGGGGAAGTTTGGGCCTCGGATACTCTTGTATAAATGATAAAAGCATTGTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
||
| CDS-3UTR CAA 90 bp | ATATCTCATTGTTCCCAAAAGCCAAAAGTAGAAGTAATCTGGTATCATTTGGTGTGTCTTCTGGTCTCCTaGGGCACTCACACTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISHCSQKPKVEVIWYHLVCLLVS*GTHTPV Trigger: GACTGGAGTGTGAGTGCCCAAGGAGACCAGAAGACA...CACCAAATGATACCAGATTACTTCTACTTTTGGCTTTTGGGAACAATGAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCCAAAAATCACCTGCCAAACGCATCAGTGTTTCAAACCCAAGGATACTTGTTTTGGTCGTCTGACTaGACAGCAATGATGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: IAKNHLPNASVFQTQGYLFWSSD*TAMMKS Trigger: GGATTTCATCATTGCTGTCAAGTCAGACGACCAAAA...CAAGTATCCTTGGGTTTGAAACACTGATGCGTTTGGCAGGTGATTTTTGGCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| CDS-3UTR CAA 90 bp | ATGGGGCTATTGGTGAATATTTCAGTCCTGCCTATAACACATCACATCACATCATTTTTCTCCGGCAATTaGTGTACCAGTGCATGGACT | + |
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Preference number: 5 (lower is better) Translates to: MGLLVNISVLPITHHITSFFSGN*CTSAWT Trigger: AGTCCATGCACTGGTACACAAATTGCCGGAGAAAAA...TGATGTGATGTGATGTGTTATAGGCAGGACTGAAATATTCACCAATAGCCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| CDS-3UTR CAA 90 bp | TTCATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGGGAGGTCTATAATCTaGATTGGCAGACTTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: FISVVLLHTLTLGYLIQEGRSII*IGRLHP Trigger: AGGATGAAGTCTGCCAATCAAGATTATAGACCTCCC...TTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| CDS-3UTR CAA 90 bp | TTTAACTCAAAAATAGTACTCCATCTTAGGAAAGCAGGGACTCTGGCCCATATTGAGAATTTGCTGTTCTaGCAGAAAACTGGAATATGG | + |
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Preference number: 5 (lower is better) Translates to: FNSKIVLHLRKAGTLAHIENLLF*QKTGIW Trigger: CCATATTCCAGTTTTCTGCAAGAACAGCAAATTCTC...AATATGGGCCAGAGTCCCTGCTTTCCTAAGATGGAGTACTATTTTTGAGTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| CDS-3UTR CAA 90 bp | CATTTCTGTAGTGCTCCTGCATACTTTAACTTTAGGGTACTTAATTCAGGAAGATACATTTCTTCTTTCTaGCTAATTATGGCGGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: HFCSAPAYFNFRVLNSGRYISSF*LIMAGN Trigger: GTTACCCGCCATAATTAGCAAGAAAGAAGAAATGTA...TCTTCCTGAATTAAGTACCCTAAAGTTAAAGTATGCAGGAGCACTACAGAAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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| CDS CCA 72 bp | TCCGACCATCAAGTAGCTCAGAACTCTACTGTCTTCTaGTCTCCTTGGGCACTCACACTCCAGTCTACGCCT | + |
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Preference number: 6 (lower is better) Translates to: SDHQVAQNSTVF*SPWALTLQSTP Trigger: AGGCGTAGACTGGAGTGTGAGTGCCCAAGGAGACCAGAAGACAGTAGAGTTCTGAGCTACTTGATGGTCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| CDS CCA 72 bp | CAAGTAGCTCAGAACTCTACTGTCTTCTGGTCTCCTTaGGCACTCACACTCCAGTCTACGCCTTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QVAQNSTVFWSP*ALTLQSTPFFF Trigger: GAAGAAGAAAGGCGTAGACTGGAGTGTGAGTGCCCAAGGAGACCAGAAGACAGTAGAGTTCTGAGCTACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| CDS CAA 72 bp | TCAAGTAGCTCAGAACTCTACTGTCTTCTGGTCTCCTaGGGCACTCACACTCCAGTCTACGCCTTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSSSELYCLLVS*GTHTPVYAFLL Trigger: AAGAAGAAAGGCGTAGACTGGAGTGTGAGTGCCCAAGGAGACCAGAAGACAGTAGAGTTCTGAGCTACTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183182.2 |
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| CDS TCA 72 bp | TCTTCCCACTGGCTTTCACATCGGAGACGCTCATTGTaGACATTTTGCTTCCTTTGTCGTAAGTACAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SSHWLSHRRRSL*TFCFLCRKYSS Trigger: ACTACTGTACTTACGACAAAGGAAGCAAAATGTTCACAATGAGCGTCTCCGATGTGAAAGCCAGTGGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093893.12 |
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