Pregenerated sensors for ARHGAP40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074625Ensembl transcript IDs: ENSMUST00000099133.11
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACACCACTTCAGCTGCGCCCTCTGCCAGCTGCTTTCCACCCTTGGTaGGCTTGGGAGGCCGCCCGCGGGGCAGGAAGAGACTGGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQLRPLPAAFHPW*AWEAARGAGRDWGP Trigger: TGGTCCCCAGTCTCTTCCTGCCCCGCGGGCGGCCTCCCAAGCTCACCAAGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | TACTGCACCATCATGCACACCACTTCAGCTGCGCCCTCTGCCAGCTaGTTTCCACCCTTGGTGAGCTTGGGAGGCCGCCCGCGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YCTIMHTTSAAPSAS*FPPLVSLGGRPRGR Trigger: CCTGCCCCGCGGGCGGCCTCCCAAGCTCACCAAGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGTGCATGATGGTGCAGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | GTCCTGGTACTGCACCATCATGCACACCACTTCAGCTGCGCCCTCTaGCAGCTGCTTTCCACCCTTGGTGAGCTTGGGAGGCCGCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLVLHHHAHHFSCAL*QLLSTLGELGRPPA Trigger: CGCGGGCGGCCTCCCAAGCTCACCAAGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGTGCATGATGGTGCAGTACCAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | ACTCTCTGCCCAGGACAGCCGGGAGTGGGAGCAGTCAGCAGGGCGTaGCTTCTGAGGATGCTGTTGCAGATTTGTGGGGCCTGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLCPGQPGVGAVSRA*LLRMLLQICGACRE Trigger: CTCTCTACAGGCCCCACAAATCTGCAACAGCATCCTCAGAAGCCACGCCCTGCTGACTGCTCCCACTCCCGGCTGTCCTGGGCAGAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | CCGCCCTCTGTTGGATCCGTTCCACCTCCATCCAGAAGCCATCCATaGACAAACTCTCTGCCCAGGACAGCCGGGAGTGGGAGCAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSVGSVPPPSRSHP*TNSLPRTAGSGSSQ Trigger: CTGACTGCTCCCACTCCCGGCTGTCCTGGGCAGAGAGTTTGTCCATGGATGGCTTCTGGATGGAGGTGGAACGGATCCAACAGAGGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | CCAAAGCAGGTCCTGGTACTGCACCATCATGCACACCACTTCAGCTaGGCCCTCTGCCAGCTGCTTTCCACCCTTGGTGAGCTTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKQVLVLHHHAHHFS*ALCQLLSTLGELGR Trigger: CCTCCCAAGCTCACCAAGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGTGCATGATGGTGCAGTACCAGGACCTGCTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | CCCAGACCACCAGCAAGACCCGACAGGCCTGTGTCCTGTAGCCACTaGGATTCGGTGTCTCCTTCTAGGAGCTGGCTTCTGCCTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PRPPARPDRPVSCSH*DSVSPSRSWLLPSP Trigger: TGGTGAAGGCAGAAGCCAGCTCCTAGAAGGAGACACCGAATCCCAGTGGCTACAGGACACAGGCCTGTCGGGTCTTGCTGGTGGTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | AGAAAGAGGCGACCGTCCAAAGCAGGTCCTGGTACTGCACCATCATaGACACCACTTCAGCTGCGCCCTCTGCCAGCTGCTTTCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRRPSKAGPGTAPS*TPLQLRPLPAAFHP Trigger: AGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGTGCATGATGGTGCAGTACCAGGACCTGCTTTGGACGGTCGCCTCTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 90 bp | ACCTGGGTGCTGGGGAAGACTCTGTGGTCAGCTTCCAGAAGGCTATaGAGAGGCACGCCAAAAAGGCCGGAGTCTGGGCCTTTCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TWVLGKTLWSASRRL*RGTPKRPESGPFHF Trigger: GAAGTGGAAAGGCCCAGACTCCGGCCTTTTTGGCGTGCCTCTTCATAGCCTTCTGGAAGCTGACCACAGAGTCTTCCCCAGCACCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | GCACGCCAAAAAGGCCGGAGTCTGGGCCTTTCCACTTCCCGCCTTTaGATCTCTTCAGGTCCAGGCCCAGGATGTCATAGAGTGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARQKGRSLGLSTSRL*ISSGPGPGCHRVLS Trigger: TGACAGCACTCTATGACATCCTGGGCCTGGACCTGAAGAGATGCAAAGGCGGGAAGTGGAAAGGCCCAGACTCCGGCCTTTTTGGCGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | CAGAGGCACAGGCAGCTTCCGGAGGAACCTCTTGAGCAAGTCAGATaGGTCGTTGGGATGAACCTTGTCCCAGCTAACGAGGCCGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: QRHRQLPEEPLEQVR*VVGMNLVPANEAGI Trigger: TATGCCGGCCTCGTTAGCTGGGACAAGGTTCATCCCAACGACGCATCTGACTTGCTCAAGAGGTTCCTCCGGAAGCTGCCTGTGCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | GGATTCAGAGGCACCTGCAGAAGATCCATGCTAGGCCAAGTCGCCTaGACCTGGATCTTTGCCACTTTGGGAGTCGCCTCAAGCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GFRGTCRRSMLGQVA*TWIFATLGVASSPS Trigger: GGAAGGGCTTGAGGCGACTCCCAAAGTGGCAAAGATCCAGGTCCAGGCGACTTGGCCTAGCATGGATCTTCTGCAGGTGCCTCTGAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | GGCTGTGAGCCAGGGTTGAGGTGCTCTGTGAACAGCTTCAAGACGTaGGTCACCCTGGTGCTAGGATTCAGAGGCACCTGCAGAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GCEPGLRCSVNSFKT*VTLVLGFRGTCRRS Trigger: GGATCTTCTGCAGGTGCCTCTGAATCCTAGCACCAGGGTGACCCACGTCTTGAAGCTGTTCACAGAGCACCTCAACCCTGGCTCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | TTTGGGTTCTCACTGCCCTCTTCAGGCTGTGAGCCAGGGTTGAGGTaGTCTGTGAACAGCTTCAAGACGTGGGTCACCCTGGTGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FGFSLPSSGCEPGLR*SVNSFKTWVTLVLG Trigger: TCCTAGCACCAGGGTGACCCACGTCTTGAAGCTGTTCACAGAGCACCTCAACCCTGGCTCACAGCCTGAAGAGGGCAGTGAGAACCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 90 bp | TCCACAAGGTCATCTTGTTGTGCTGCTCCTGGGCTGCCACCTTCCTaGGGAATTCCAGGAGTGCCTTCAAGGTGTTGCGGTTGGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STRSSCCAAPGLPPS*GIPGVPSRCCGWVQ Trigger: CTGAACCCAACCGCAACACCTTGAAGGCACTCCTGGAATTCCTCAGGAAGGTGGCAGCCCAGGAGCAGCACAACAAGATGACCTTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | CCCGCCTTTGCATCTCTTCAGGTCCAGGCCCAGGATGTCATAGAGTaGTGTCAGCTCTATCAGGGCCAAGGGAGGGATCTTCTTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PAFASLQVQAQDVIE*CQLYQGQGRDLLHV Trigger: GACATGAAGAAGATCCCTCCCTTGGCCCTGATAGAGCTGACAGCACTCTATGACATCCTGGGCCTGGACCTGAAGAGATGCAAAGGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 90 bp | AGCTTCAAGACGTGGGTCACCCTGGTGCTAGGATTCAGAGGCACCTaGAGAAGATCCATGCTAGGCCAAGTCGCCTGGACCTGGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFKTWVTLVLGFRGT*RRSMLGQVAWTWIF Trigger: AAAGATCCAGGTCCAGGCGACTTGGCCTAGCATGGATCTTCTGCAGGTGCCTCTGAATCCTAGCACCAGGGTGACCCACGTCTTGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | CTTCTGCCTTCACCACAGTCCTCCTTCTTCACTTCCGCCCTCTGTTaGATCCGTTCCACCTCCATCCAGAAGCCATCCATGGACAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSPQSSFFTSALC*IRSTSIQKPSMDKL Trigger: GAGTTTGTCCATGGATGGCTTCTGGATGGAGGTGGAACGGATCCAACAGAGGGCGGAAGTGAAGAAGGAGGACTGTGGTGAAGGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 90 bp | CAGAGCTGGGAACGACGGCCATTACTGTCATTCAGTTTTCGCACTTaGGCTACCAAGAAAGAGGCGACCGTCCAAAGCAGGTCCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QSWERRPLLSFSFRT*ATKKEATVQSRSWY Trigger: GTACCAGGACCTGCTTTGGACGGTCGCCTCTTTCTTGGTAGCTCAAGTGCGAAAACTGAATGACAGTAATGGCCGTCGTTCCCAGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 90 bp | TTCTCCATGGGGGTTGGCACGGTACAAATCCAAGAGGTAGGCATCTaGGTCCAGGCGACGTTCACCAATATTTCCTCCAACTTCATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSMGVGTVQIQEVGI*VQATFTNISSNFIN Trigger: GTTTATGAAGTTGGAGGAAATATTGGTGAACGTCGCCTGGACCCAGATGCCTACCTCTTGGATTTGTACCGTGCCAACCCCCATGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 90 bp | GGCGACGTTCACCAATATTTCCTCCAACTTCATAAACAAGGAAGGTaGCCGGCTTCGTGTTATGTGAGAGAAGGCTGTTTGGGTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GDVHQYFLQLHKQGR*PASCYVREGCLGSH Trigger: GTGAGAACCCAAACAGCCTTCTCTCACATAACACGAAGCCGGTCACCTTCCTTGTTTATGAAGTTGGAGGAAATATTGGTGAACGTCGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | ACTTCAGCTGCGCCCTCTGCCAGCTGCTTTCCACCCTTGGTGAGCTaGGGAGGCCGCCCGCGGGGCAGGAAGAGACTGGGGACCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: TSAAPSASCFPPLVS*GGRPRGRKRLGTIT Trigger: AGTGATGGTCCCCAGTCTCTTCCTGCCCCGCGGGCGGCCTCCCAAGCTCACCAAGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | CCGGGAGTGGGAGCAGTCAGCAGGGCGTGGCTTCTGAGGATGCTGTaGCAGATTTGTGGGGCCTGTAGAGAGGCCAGGGCTGCAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGVGAVSRAWLLRML*QICGACREARAAAQ Trigger: CTGGGCTGCAGCCCTGGCCTCTCTACAGGCCCCACAAATCTGCAACAGCATCCTCAGAAGCCACGCCCTGCTGACTGCTCCCACTCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | ATCATGCACACCACTTCAGCTGCGCCCTCTGCCAGCTaGTTTCCACCCTTGGTGAGCTTGGGAGGCCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: IMHTTSAAPSAS*FPPLVSLGGRP Trigger: CGGGCGGCCTCCCAAGCTCACCAAGGGTGGAAAGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGTGCATGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 72 bp | CGGGCACTGATGCAAAGGCTGGGAGGTACTCGGCTGTaGGCAGAGGCACAGGCAGCTTCCGGAGGAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RALMQRLGGTRL*AEAQAASGGTS Trigger: AGAGGTTCCTCCGGAAGCTGCCTGTGCCTCTGCTCACAGCCGAGTACCTCCCAGCCTTTGCATCAGTGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 72 bp | AGCCGGGAGTGGGAGCAGTCAGCAGGGCGTGGCTTCTaGGGATGCTGTTGCAGATTTGTGGGGCCTGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SREWEQSAGRGF*GCCCRFVGPVE Trigger: CTCTACAGGCCCCACAAATCTGCAACAGCATCCTCAGAAGCCACGCCCTGCTGACTGCTCCCACTCCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | CGACCGTCCAAAGCAGGTCCTGGTACTGCACCATCATaGACACCACTTCAGCTGCGCCCTCTGCCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPSKAGPGTAPS*TPLQLRPLPAA Trigger: AGCAGCTGGCAGAGGGCGCAGCTGAAGTGGTGTGCATGATGGTGCAGTACCAGGACCTGCTTTGGACGGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | GGAGCAGTCAGCAGGGCGTGGCTTCTGAGGATGCTGTaGCAGATTTGTGGGGCCTGTAGAGAGGCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAVSRAWLLRML*QICGACREARA Trigger: AGCCCTGGCCTCTCTACAGGCCCCACAAATCTGCAACAGCATCCTCAGAAGCCACGCCCTGCTGACTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | TCCCTCGAAGACAAGTCTCCTATCCTGGTCACGCCCAGTCTGCCTTaGGGAATTCTGAACCTCGGCAGGGGTCCCTTGCCCCAGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLEDKSPILVTPSLP*GILNLGRGPLPQAV Trigger: CACTGCCTGGGGCAAGGGACCCCTGCCGAGGTTCAGAATTCCCAAAGGCAGACTGGGCGTGACCAGGATAGGAGACTTGTCTTCGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | CTCCTGGGCTGCCACCTTCCTGAGGAATTCCAGGAGTaGCTTCAAGGTGTTGCGGTTGGGTTCAGGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGCHLPEEFQE*LQGVAVGFRQE Trigger: CTCCTGCCTGAACCCAACCGCAACACCTTGAAGGCACTCCTGGAATTCCTCAGGAAGGTGGCAGCCCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | ACGTGGGTCACCCTGGTGCTAGGATTCAGAGGCACCTaGAGAAGATCCATGCTAGGCCAAGTCGCCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: TWVTLVLGFRGT*RRSMLGQVAWT Trigger: GGTCCAGGCGACTTGGCCTAGCATGGATCTTCTGCAGGTGCCTCTGAATCCTAGCACCAGGGTGACCCACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | GTTGGATCCGTTCCACCTCCATCCAGAAGCCATCCATaGACAAACTCTCTGCCCAGGACAGCCGGGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGSVPPPSRSHP*TNSLPRTAGSG Trigger: CCCACTCCCGGCTGTCCTGGGCAGAGAGTTTGTCCATGGATGGCTTCTGGATGGAGGTGGAACGGATCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | CCAGCAAGACCCGACAGGCCTGTGTCCTGTAGCCACTaGGATTCGGTGTCTCCTTCTAGGAGCTGGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PARPDRPVSCSH*DSVSPSRSWLL Trigger: CAGAAGCCAGCTCCTAGAAGGAGACACCGAATCCCAGTGGCTACAGGACACAGGCCTGTCGGGTCTTGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | GACAAGTCTCCTATCCTGGTCACGCCCAGTCTGCCTTaGGGAATTCTGAACCTCGGCAGGGGTCCCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: DKSPILVTPSLP*GILNLGRGPLP Trigger: GGGCAAGGGACCCCTGCCGAGGTTCAGAATTCCCAAAGGCAGACTGGGCGTGACCAGGATAGGAGACTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | CTAGGCCAAGTCGCCTGGACCTGGATCTTTGCCACTTaGGGAGTCGCCTCAAGCCCTTCCCCAGCCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGQVAWTWIFAT*GVASSPSPALS Trigger: AGACAAGGCTGGGGAAGGGCTTGAGGCGACTCCCAAAGTGGCAAAGATCCAGGTCCAGGCGACTTGGCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | AGATCCATGCTAGGCCAAGTCGCCTGGACCTGGATCTTTGCCACTTaGGGAGTCGCCTCAAGCCCTTCCCCAGCCTTGTCTCTGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RSMLGQVAWTWIFAT*GVASSPSPALSLST Trigger: CGTGGACAGAGACAAGGCTGGGGAAGGGCTTGAGGCGACTCCCAAAGTGGCAAAGATCCAGGTCCAGGCGACTTGGCCTAGCATGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | AGGCTGTTTGGGTTCTCACTGCCCTCTTCAGGCTGTGAGCCAGGGTaGAGGTGCTCTGTGAACAGCTTCAAGACGTGGGTCACCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLFGFSLPSSGCEPG*RCSVNSFKTWVTLV Trigger: CACCAGGGTGACCCACGTCTTGAAGCTGTTCACAGAGCACCTCAACCCTGGCTCACAGCCTGAAGAGGGCAGTGAGAACCCAAACAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 72 bp | CATCCCAGCCAGCTCCTGTGGTCCCCCAGGTTCTGCTaGTCTCAGGGGAGATGCAGAGTCCTCAGAGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HPSQLLWSPRFC*SQGRCRVLRVD Trigger: ATCAACTCTGAGGACTCTGCATCTCCCCTGAGATCAGCAGAACCTGGGGGACCACAGGAGCTGGCTGGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 72 bp | CTGGGGAAGACTCTGTGGTCAGCTTCCAGAAGGCTATaGAGAGGCACGCCAAAAAGGCCGGAGTCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGKTLWSASRRL*RGTPKRPESGP Trigger: AGGCCCAGACTCCGGCCTTTTTGGCGTGCCTCTTCATAGCCTTCTGGAAGCTGACCACAGAGTCTTCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | TCACTGCCCTCTTCAGGCTGTGAGCCAGGGTTGAGGTaGTCTGTGAACAGCTTCAAGACGTGGGTCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLPSSGCEPGLR*SVNSFKTWVTL Trigger: CAGGGTGACCCACGTCTTGAAGCTGTTCACAGAGCACCTCAACCCTGGCTCACAGCCTGAAGAGGGCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | GGCACCTGCAGAAGATCCATGCTAGGCCAAGTCGCCTaGACCTGGATCTTTGCCACTTTGGGAGTCGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GTCRRSMLGQVA*TWIFATLGVAS Trigger: TGAGGCGACTCCCAAAGTGGCAAAGATCCAGGTCCAGGCGACTTGGCCTAGCATGGATCTTCTGCAGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | CCAGGGTTGAGGTGCTCTGTGAACAGCTTCAAGACGTaGGTCACCCTGGTGCTAGGATTCAGAGGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGLRCSVNSFKT*VTLVLGFRGTC Trigger: GCAGGTGCCTCTGAATCCTAGCACCAGGGTGACCCACGTCTTGAAGCTGTTCACAGAGCACCTCAACCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | CTGAGGAATTCCAGGAGTGCCTTCAAGGTGTTGCGGTaGGGTTCAGGCAGGAGGAGGACGAGCAGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRNSRSAFKVLR*GSGRRRTSRWR Trigger: TCTCCACCTGCTCGTCCTCCTCCTGCCTGAACCCAACCGCAACACCTTGAAGGCACTCCTGGAATTCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | GGGTTCTCACTGCCCTCTTCAGGCTGTGAGCCAGGGTaGAGGTGCTCTGTGAACAGCTTCAAGACGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFSLPSSGCEPG*RCSVNSFKTWV Trigger: GACCCACGTCTTGAAGCTGTTCACAGAGCACCTCAACCCTGGCTCACAGCCTGAAGAGGGCAGTGAGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | ACTGGGATTCGGTGTCTCCTTCTAGGAGCTGGCTTCTaGCTTCACCACAGTCCTCCTTCTTCACTTCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TGIRCLLLGAGF*LHHSPPSSLPP Trigger: GGGCGGAAGTGAAGAAGGAGGACTGTGGTGAAGGCAGAAGCCAGCTCCTAGAAGGAGACACCGAATCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | AAGAAAGAGGCGACCGTCCAAAGCAGGTCCTGGTACTaGACCATCATGCACACCACTTCAGCTGCGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KKEATVQSRSWY*TIMHTTSAAPS Trigger: AGAGGGCGCAGCTGAAGTGGTGTGCATGATGGTGCAGTACCAGGACCTGCTTTGGACGGTCGCCTCTTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | ACAGCAAAGCTTGCAGGAGCAGTGGGACCTGGGTGCTaGGGAAGACTCTGTGGTCAGCTTCCAGAAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TAKLAGAVGPGC*GRLCGQLPEGY Trigger: ATAGCCTTCTGGAAGCTGACCACAGAGTCTTCCCCAGCACCCAGGTCCCACTGCTCCTGCAAGCTTTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | GCATCTCTTCAGGTCCAGGCCCAGGATGTCATAGAGTaGTGTCAGCTCTATCAGGGCCAAGGGAGGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASLQVQAQDVIE*CQLYQGQGRDL Trigger: AAGATCCCTCCCTTGGCCCTGATAGAGCTGACAGCACTCTATGACATCCTGGGCCTGGACCTGAAGAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS GCA 72 bp | AGGCAGCTTCCGGAGGAACCTCTTGAGCAAGTCAGATaGGTCGTTGGGATGAACCTTGTCCCAGCTAACGAG | + |
|
Preference number: 6 (lower is better) Translates to: RQLPEEPLEQVR*VVGMNLVPANE Trigger: CTCGTTAGCTGGGACAAGGTTCATCCCAACGACGCATCTGACTTGCTCAAGAGGTTCCTCCGGAAGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | TCACCACAGTCCTCCTTCTTCACTTCCGCCCTCTGTTaGATCCGTTCCACCTCCATCCAGAAGCCATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SPQSSFFTSALC*IRSTSIQKPSM Trigger: CATGGATGGCTTCTGGATGGAGGTGGAACGGATCCAACAGAGGGCGGAAGTGAAGAAGGAGGACTGTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | CTCCACAGCCAAGTCTTGAGGCCCCCATCACAGAGCTaGGAACGACGGCCATTACTGTCATTCAGTTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LHSQVLRPPSQS*ERRPLLSFSFR Trigger: GCGAAAACTGAATGACAGTAATGGCCGTCGTTCCCAGCTCTGTGATGGGGGCCTCAAGACTTGGCTGTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | GCTTCTGCCTTCACCACAGTCCTCCTTCTTCACTTCCGCCCTCTGTaGGATCCGTTCCACCTCCATCCAGAAGCCATCCATGGACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: ASAFTTVLLLHFRPL*DPFHLHPEAIHGQT Trigger: AGTTTGTCCATGGATGGCTTCTGGATGGAGGTGGAACGGATCCAACAGAGGGCGGAAGTGAAGAAGGAGGACTGTGGTGAAGGCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CCA 72 bp | GGGGTTGGCACGGTACAAATCCAAGAGGTAGGCATCTaGGTCCAGGCGACGTTCACCAATATTTCCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GVGTVQIQEVGI*VQATFTNISSN Trigger: GTTGGAGGAAATATTGGTGAACGTCGCCTGGACCCAGATGCCTACCTCTTGGATTTGTACCGTGCCAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | TTCACCACAGTCCTCCTTCTTCACTTCCGCCCTCTGTaGGATCCGTTCCACCTCCATCCAGAAGCCATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FTTVLLLHFRPL*DPFHLHPEAIH Trigger: ATGGATGGCTTCTGGATGGAGGTGGAACGGATCCAACAGAGGGCGGAAGTGAAGAAGGAGGACTGTGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | ACAGAGCTGGGAACGACGGCCATTACTGTCATTCAGTTTTCGCACTaGAGCTACCAAGAAAGAGGCGACCGTCCAAAGCAGGTCCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TELGTTAITVIQFSH*SYQERGDRPKQVLV Trigger: TACCAGGACCTGCTTTGGACGGTCGCCTCTTTCTTGGTAGCTCAAGTGCGAAAACTGAATGACAGTAATGGCCGTCGTTCCCAGCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 90 bp | GGTTCTGCTGATCTCAGGGGAGATGCAGAGTCCTCAGAGTTGATCTaGGTCCATTTCATTCCTGAGACTCCATTCTCTGGAGCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSADLRGDAESSELI*VHFIPETPFSGASS Trigger: GGAACTGGCTCCAGAGAATGGAGTCTCAGGAATGAAATGGACCAAGATCAACTCTGAGGACTCTGCATCTCCCCTGAGATCAGCAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS TCA 72 bp | GAACGACGGCCATTACTGTCATTCAGTTTTCGCACTTaGGCTACCAAGAAAGAGGCGACCGTCCAAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERRPLLSFSFRT*ATKKEATVQSR Trigger: CCTGCTTTGGACGGTCGCCTCTTTCTTGGTAGCTCAAGTGCGAAAACTGAATGACAGTAATGGCCGTCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | GGAACGACGGCCATTACTGTCATTCAGTTTTCGCACTaGAGCTACCAAGAAAGAGGCGACCGTCCAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTTAITVIQFSH*SYQERGDRPKQ Trigger: CTGCTTTGGACGGTCGCCTCTTTCTTGGTAGCTCAAGTGCGAAAACTGAATGACAGTAATGGCCGTCGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||
| CDS CAA 72 bp | GATCTCAGGGGAGATGCAGAGTCCTCAGAGTTGATCTaGGTCCATTTCATTCCTGAGACTCCATTCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLRGDAESSELI*VHFIPETPFSG Trigger: TCCAGAGAATGGAGTCTCAGGAATGAAATGGACCAAGATCAACTCTGAGGACTCTGCATCTCCCCTGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099133.11 |
||