Pregenerated sensors for ARHGAP36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036198Ensembl transcript IDs: ENSMUST00000042444.7, ENSMUST00000114904.10, ENSMUST00000130558.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATCCCCAGTAGTGGGGCTGGCAGTGTATTTGGAATTCCCATCCTaGCCCGAGCATCAGGTGGAACTCCTTCTTATCCTTAGTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: ASPVVGLAVYLEFPS*PEHQVELLLILSSL Trigger: TAAAGAACTAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGAATTCCAAATACACTGCCAGCCCCACTACTGGGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR TCA 90 bp | GATGTGACACAATTTAGCATTAATTGTTGTCATCTGTCAGTAGGCTaGCCTAACATTCTAACATACCTCTTGAGGGCCTTTCCAGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: DVTQFSINCCHLSVG*PNILTYLLRAFPVE Trigger: CTCAACTGGAAAGGCCCTCAAGAGGTATGTTAGAATGTTAGGTCAGCCTACTGACAGATGACAACAATTAATGCTAAATTGTGTCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCCCTTTTCCCCTGTCTaGCAACTTAGAGAAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KRRQGSTKAPGHDTEIALPFSPV*QLREGK Trigger: TTTCCCTTCTCTAAGTTGCCAGACAGGGGAAAAGGG...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGAGCATGCAATCCCCTTaGGGGGAGGGAAAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQSMQSP*GEGKHL Trigger: GAGGTGCTTTCCCTCCCCCCAAGGGGATTGCATGCT...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTGCACCTCGAGATTTGTaGGCTTCTCTGGGACAGATG | + |
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Preference number: 2 (lower is better) Translates to: LCLTSCFADIRGVNTSCLAPRDL*ASLGQM Trigger: CATCTGTCCCAGAGAAGCTCACAAATCTCGAGGTGC...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | GTATTTGGAATTCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTCTTTACTGTTTCCTGTaGCATTCCAGGTCTACCCCC | + |
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Preference number: 2 (lower is better) Translates to: VFGIPILTRASGGTPSYPLYCFL*HSRSTP Trigger: GGGGGTAGACCTGGAATGTCACAGGAAACAGTAAAG...AGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGAATTCCAAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAAGAGGGCCTTTCCAGTTaGGCTCTTGGGAGGAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VWMSYLTHISVLPEQVPQEGLSS*ALGRRV Trigger: TACCCTCCTCCCAAGAGCTCAACTGGAAAGGCCCTC...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGGGCTGGCAGTGTATTTaGAATTCCCATCCTGACCCG | + |
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Preference number: 2 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQGWQCI*NSHPDP Trigger: CGGGTCAGGATGGGAATTCCAAATACACTGCCAGCC...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGCTTTACTGTTTCCTGTaGCATTCCAGGTCTACCCCC | + |
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Preference number: 2 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQLYCFL*HSRSTP Trigger: GGGGGTAGACCTGGAATGTCACAGGAAACAGTAAAG...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGCCCGTTGGCATGTCCTaGGCAAAACTGCACAGAATT | + |
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Preference number: 2 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQPVGMS*AKLHRI Trigger: AATTCTGTGCAGTTTTGCTCAGGACATGCCAACGGG...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR GCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTAGGCGGTGGATTTGCTaGGGGGACAGGGCTATGAGT | + |
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Preference number: 2 (lower is better) Translates to: EQSQIFELCGCYPLYEQFRRWIC*GDRAMS Trigger: ACTCATAGCCCTGTCCCCGCAGCAAATCCACCGCCT...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTAGCATGCAATCCCCTTaGGGGGAGGGAAAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: EQSQIFELCGCYPLYEQFSMQSP*GEGKHL Trigger: GAGGTGCTTTCCCTCCCCCCAAGGGGATTGCATGCT...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGTTGAGGTTTCCCCGTTaGCATGTCCTGAGCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQLRFPR*HVLSKT Trigger: AGTTTTGCTCAGGACATGCCAACGGGGAAACCTCAA...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTGCACCTCGAGATTTGTaGGCTTCTCTGGGACAGATG | + |
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Preference number: 2 (lower is better) Translates to: DEMPEKFEQSQIFELCGCAPRDL*ASLGQM Trigger: CATCTGTCCCAGAGAAGCTCACAAATCTCGAGGTGC...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGAAAGCACCTCGAGATTTGTGAGCTTCTCTGGGACAGATGTTTATCACAAAGACCCGAGCATCAGGTaGAACTCCTTCTTATCCTTA | + |
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Preference number: 2 (lower is better) Translates to: RESTSRFVSFSGTDVYHKDPSIR*NSFLSL Trigger: TAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTC...TTTGTGATAAACATCTGTCCCAGAGAAGCTCACAAATCTCGAGGTGCTTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | ATCACAAATGTAACATCAATTAAAGGAAGGGGCTGCTGTAGTGAGAGGAAAGCCGACCCGAGCATCAGGTaGAACTCCTTCTTATCCTTA | + |
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Preference number: 2 (lower is better) Translates to: ITNVTSIKGRGCCSERKADPSIR*NSFLSL Trigger: TAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTC...GGCTTTCCTCTCACTACAGCAGCCCCTTCCTTTAATTGATGTTACATTTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAATTGAGGTTTCCCCGTTaGCATGTCCTGAGCAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: VWMSYLTHISVLPEQVPQLRFPR*HVLSKT Trigger: AGTTTTGCTCAGGACATGCCAACGGGGAAACCTCAA...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR GCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGGAAACTATGTGTCTGTaGCTAACTAGTTGTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQETMCL*LTSCFA Trigger: TGCAAAACAACTAGTTAGGCACAGACACATAGTTTC...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTCCCTTTTCCCCTGTCTaGCAACTTAGAGAAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: EQSQIFELCGCYPLYEQFPFSPV*QLREGK Trigger: TTTCCCTTCTCTAAGTTGCCAGACAGGGGAAAAGGG...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGCAGACATCAGGGGTGTaGACACCAGCTGTCTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVQTSGV*TPAVFK Trigger: TTTAAAGACAGCTGGTGTTCACACCCCTGATGTCTG...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGCATCTGTCAGTAGGCTaGCCTAACATTCTAACATAC | + |
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Preference number: 2 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVHLSVG*PNILTY Trigger: GTATGTTAGAATGTTAGGTCAGCCTACTGACAGATG...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR TCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTGAGTTTAACTACTTaGAACTATGTGTCTGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVVSLTT*NYVSVP Trigger: AGGCACAGACACATAGTTTCAAGTAGTTAAACTCAC...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR CAA 90 bp | AAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATaGTATGAACAGTTTCTATCCCTCAATAGAATACATTCTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: KFEQSQIFELCGCYP*YEQFLSLNRIHSSL Trigger: GAGTGAAGAATGTATTCTATTGAGGGATAGAAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR GCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGAAACTATGTGTCTGTaGCTAACTAGTTGTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVETMCL*LTSCFA Trigger: TGCAAAACAACTAGTTAGGCACAGACACATAGTTTC...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR TCA 72 bp | GTAGTGGGGCTGGCAGTGTATTTGGAATTCCCATCCTaGCCCGAGCATCAGGTGGAACTCCTTCTTATCCTT | + |
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Preference number: 3 (lower is better) Translates to: VVGLAVYLEFPS*PEHQVELLLIL Trigger: AAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGAATTCCAAATACACTGCCAGCCCCACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CAA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGCTTGAGGTTTCCCCGTaGGCATGTCCTGAGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQLEVSP*ACPEQN Trigger: GTTTTGCTCAGGACATGCCAACGGGGAAACCTCAAG...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAACTTGAGGTTTCCCCGTaGGCATGTCCTGAGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: VWMSYLTHISVLPEQVPQLEVSP*ACPEQN Trigger: GTTTTGCTCAGGACATGCCAACGGGGAAACCTCAAG...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CAA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGGGTGAGTTTAACTACTaGAAACTATGTGTCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQGEFNY*KLCVCA Trigger: GGCACAGACACATAGTTTCAAGTAGTTAAACTCACC...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CAA 90 bp | CTGCATAGAGGATCTACAGAGACGATAAATAAGAGTGTTTGTAATCAGGTGAGTATTCTAACATACCTCTaGAGGGCCTTTCCAGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: LHRGSTETINKSVCNQVSILTYL*RAFPVE Trigger: CTCAACTGGAAAGGCCCTCAAGAGGTATGTTAGAAT...ACTCACCTGATTACAAACACTCTTATTTATCGTCTCTGTAGATCCTCTATGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR-3UTR CAA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTGGTGAGTTTAACTACTaGAAACTATGTGTCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: EQSQIFELCGCYPLYEQFGEFNY*KLCVCA Trigger: GGCACAGACACATAGTTTCAAGTAGTTAAACTCACC...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| 3UTR TCA 72 bp | CAATTTAGCATTAATTGTTGTCATCTGTCAGTAGGCTaGCCTAACATTCTAACATACCTCTTGAGGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: QFSINCCHLSVG*PNILTYLLRAF Trigger: AAAGGCCCTCAAGAGGTATGTTAGAATGTTAGGTCAGCCTACTGACAGATGACAACAATTAATGCTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CCA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGTTGCCCTTCTTCCCCTaGGGCACACGGGGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KRRQGSTKAPGHDTEIALLPFFP*GTRGSG Trigger: CCCACTGCCCCGTGTGCCCCAGGGGAAGAAGGGCAA...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTTTGCCCTTCTTCCCCTaGGGCACACGGGGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLLPFFP*GTRGSG Trigger: CCCACTGCCCCGTGTGCCCCAGGGGAAGAAGGGCAA...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR TCA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGGGATGCCAAAGGTCTTaGGTGATGCAGCCCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KRRQGSTKAPGHDTEIALGCQRS*VMQPCL Trigger: AAGACAGGGCTGCATCACTCAAGACCTTTGGCATCC...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR GCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGCAGGGGAACCAGCAGTaGTGGCAGGCACAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQQGNQQ*WQAQQA Trigger: AGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTG...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR TCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTAGCTCAGAGAGGCTGTaGATGGATACCATGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPSSERL*MDTMSM Trigger: CATGGACATGGTATCCATTCACAGCCTCTCTGAGCT...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR TCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTGAGCTCTGTCCGGCTTaGATTCAGAGAGGAAATGTC | + |
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Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPELCPA*IQRGNV Trigger: GACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTC...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR TCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTTCAAAGGGCTGGCTCTaGGCAAGGATAGCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLSKGWL*ARIAAW Trigger: CCAGGCTGCTATCCTTGCTCAGAGCCAGCCCTTTGA...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTCAGAGAGGAAATGTCTaGCCACGAGTTCGTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPQRGNV*PRVRGK Trigger: CTTACCACGAACTCGTGGCCAGACATTTCCTCTCTG...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR TCA 90 bp | CTACTTGAAACTATGTGTCTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTCCATGCTGCGGTCTaGGTTCTGTCCTGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLETMCLCLTSCFADIRGVHAAV*VLSWGS Trigger: GGAGCCCCAGGACAGAACTCAGACCGCAGCATGGAC...ACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAGACACATAGTTTCAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR GCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAACAGGGGAACCAGCAGTaGTGGCAGGCACAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQQGNQQ*WQAQQA Trigger: AGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTG...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CCA 90 bp | GTATTTGGAATTCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTGGCTCATCTTCCTCTTaGATCCCAGAAGCCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VFGIPILTRASGGTPSYPGSSSS*IPEAAV Trigger: GACAGCGGCTTCTGGGATCCAAGAGGAAGATGAGCC...AGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGAATTCCAAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CCA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGTTTATGCGAGCACTCTaGATCTTCCTCAGATTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KRRQGSTKAPGHDTEIALFMRAL*IFLRFR Trigger: CCGGAATCTGAGGAAGATCCAGAGTGCTCGCATAAA...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR TCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGCTGTCCAATAGGCGATaGAAGCTGGGAGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQLSNRR*KLGELQ Trigger: CTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAG...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTATAGGCGATGAAAGCTaGGAGAGCTGCAGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLIGDES*ESCRIC Trigger: GCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTAT...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGATCACTGTGGCAAGGTaGCATCAGATAAACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRRQGSTKAPGHDTEIALITVAR*HQINQK Trigger: CTTCTGGTTTATCTGATGCCACCTTGCCACAGTGAT...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTACACCAAAGCCAAGTTaGTGGAAGTCATTCGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPTPKPS*WKSFGY Trigger: GTAACCGAATGACTTCCACCAACTTGGCTTTGGTGT...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | CTGCATAGAGGATCTACAGAGACGATAAATAAGAGTGTTTGTAATCAGGTGAGTGTCCATGCTGCGGTCTaGGTTCTGTCCTGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHRGSTETINKSVCNQVSVHAAV*VLSWGS Trigger: GGAGCCCCAGGACAGAACTCAGACCGCAGCATGGAC...ACTCACCTGATTACAAACACTCTTATTTATCGTCTCTGTAGATCCTCTATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTGAGAGTATTCAATGGTaGAAATCCCCACTGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPESIQW*KSPLSL Trigger: TAAGCTCAGTGGGGATTTTCACCATTGAATACTCTC...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTTTCATCTGCGCTATCTaGAGAAACTGCACCTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLFICAI*RNCTST Trigger: CGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAA...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGTTCTCAGTGATTTTATaGAGAGCCTTCAGCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRQGSTKAPGHDTEIALFSVIL*RAFSRR Trigger: ACGTCTGCTGAAGGCTCTGCATAAAATCACTGAGAA...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAAAGCGGGTGGCAAATTTaGCCTTCTTCCCCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQSGWQI*PSSPGA Trigger: TGCCCCAGGGGAAGAAGGGCAAATTTGCCACCCGCT...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGTCATTCAAGACCTCGTaGACATCTGGGGCTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQSFKTS*TSGAPS Trigger: CGAAGGAGCCCCAGATGTGCACGAGGTCTTGAATGA...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | TCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTTAGTTCTTTATGTTGAGCAATTGGGTTaGGGCTCATCTTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPDPSIRWNSFLSLVLYVEQLG*GSSSSW Trigger: CCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAAC...ATAAAGAACTAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTGACAACATTGACAGATaGAACATAGTGATCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPDNIDR*NIVINP Trigger: GGGATTGATCACTATGTTGCATCTGTCAATGTTGTC...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTAGCGGGTGGCAAATTTaGCCTTCTTCCCCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DEMPEKFEQSQIFELCGCSGWQI*PSSPGA Trigger: TGCCCCAGGGGAAGAAGGGCAAATTTGCCACCCGCT...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | ATCACAAATGTAACATCAATTAAAGGAAGGGGCTGCTGTAGTGAGAGGAAAGCCTGTTTGGACGGTCAGTaGGTAGAGCTCTGTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITNVTSIKGRGCCSERKACLDGQ*VELCPA Trigger: AGCCGGACAGAGCTCTACCCACTGACCGTCCAAACA...GGCTTTCCTCTCACTACAGCAGCCCCTTCCTTTAATTGATGTTACATTTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTCCAAAGCCAAGTTGGTaGAAGTCATTCGGTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLPKPSW*KSFGYL Trigger: CAGGTAACCGAATGACTTCCACCAACTTGGCTTTGG...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | TCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTTAGTTCTTTATTCCTGGATTCCTTGTTaGCCAACTTCCCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHPDPSIRWNSFLSLVLYSWIPC*PTSPSS Trigger: TGAAGAAGGGGAAGTTGGCCAACAAGGAATCCAGGA...ATAAAGAACTAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | CTACTTGAAACTATGTGTCTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGCAAGGATAGCAGCCTaGGCTTCAGCAGAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLETMCLCLTSCFADIRGARIAA*ASAEFS Trigger: GGAAAACTCTGCTGAAGCCCAGGCTGCTATCCTTGC...ACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAGACACATAGTTTCAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAAGCAAGGATAGCAGCCTaGGCTTCAGCAGAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQARIAA*ASAEFS Trigger: GGAAAACTCTGCTGAAGCCCAGGCTGCTATCCTTGC...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGCTTTTACCACCTGGTATCTTCGTTGTTTaGAATTACATCAAGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSTKAPGHDTEIALLLPPGIFVV*NYIKIG Trigger: CCCTATCTTGATGTAATTCCAAACAACGAAGATACC...AGGTGGTAAAAGCAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTCTGTCCAATAGGCGATaGAAGCTGGGAGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSQIFELCGCYPLYEQFLSNRR*KLGELQ Trigger: CTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAG...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAAGTTGAGCAATTGGGTTaGGGCTCATCTTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQVEQLG*GSSSSW Trigger: CCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAAC...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTGAGAGTATTCAATGGTaGAAATCCCCACTGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLESIQW*KSPLSL Trigger: TAAGCTCAGTGGGGATTTTCACCATTGAATACTCTC...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAATTCATCTGCGCTATCTaGAGAAACTGCACCTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQFICAI*RNCTST Trigger: CGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAA...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | CTACTTGAAACTATGTGTCTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTCAGAGAGGCTGTGAATaGATACCATGTCCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLETMCLCLTSCFADIRGQRGCE*IPCPCC Trigger: GCAGCATGGACATGGTATCCATTCACAGCCTCTCTG...ACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAGACACATAGTTTCAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTCTTCAACCTGCATCGTaGGTGTCAGTTCACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DEMPEKFEQSQIFELCGCLQPAS*VSVHAA Trigger: AGCAGCGTGAACTGACACCCACGATGCAGGTTGAAG...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTGATTTGTTGAGCAATTaGGTTGAGGCTCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLTSCFADIRGVNTSCLDLLSN*VEAHLP Trigger: AGGAAGATGAGCCTCAACCCAATTGCTCAACAAATC...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGATCACTGTGGCAAGGTaGCATCAGATAAACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQITVAR*HQINQK Trigger: CTTCTGGTTTATCTGATGCCACCTTGCCACAGTGAT...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | TCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTTAGTTCTTTATACACCAAAGCCAAGTTaGTGGAAGTCATTCGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHPDPSIRWNSFLSLVLYTPKPS*WKSFGY Trigger: GTAACCGAATGACTTCCACCAACTTGGCTTTGGTGT...ATAAAGAACTAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGTCTGCAAGATCCAGATaGTCCTGGTCTTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQSARSR*SWSSKS Trigger: GGATTTTGAAGACCAGGACCATCTGGATCTTGCAGA...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTCAGAGAGGAAATGTCTaGCCACGAGTTCGTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DEMPEKFEQSQIFELCGCQRGNV*PRVRGK Trigger: CTTACCACGAACTCGTGGCCAGACATTTCCTCTCTG...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTCTTCAACCTGCATCGTaGGTGTCAGTTCACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQSQIFELCGCYPLYEQFLQPAS*VSVHAA Trigger: AGCAGCGTGAACTGACACCCACGATGCAGGTTGAAG...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTATAGGCGATGAAAGCTaGGAGAGCTGCAGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQSQIFELCGCYPLYEQFIGDES*ESCRIC Trigger: GCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTAT...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGGCTCATCTTCCTCTTaGATCCCAGAAGCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVGSSSS*IPEAAV Trigger: GACAGCGGCTTCTGGGATCCAAGAGGAAGATGAGCC...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAACCAAAGCCAAGTTGGTaGAAGTCATTCGGTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQPKPSW*KSFGYL Trigger: CAGGTAACCGAATGACTTCCACCAACTTGGCTTTGG...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAATTTATGCGAGCACTCTaGATCTTCCTCAGATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQFMRAL*IFLRFR Trigger: CCGGAATCTGAGGAAGATCCAGAGTGCTCGCATAAA...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGGATGCCAAAGGTCTTaGGTGATGCAGCCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVGCQRS*VMQPCL Trigger: AAGACAGGGCTGCATCACTCAAGACCTTTGGCATCC...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | GTTTGGATGTCATACTTAACCCATATCAGTGTTTTACCAGAGCAAGTCCCGCAATGGCACGGACAACATTaGCAGATGCAACATAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VWMSYLTHISVLPEQVPQWHGQH*QMQHSD Trigger: ATCACTATGTTGCATCTGTCAATGTTGTCCGTGCCA...TTGCGGGACTTGCTCTGGTAAAACACTGATATGGGTTAAGTATGACATCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | ATCACAAATGTAACATCAATTAAAGGAAGGGGCTGCTGTAGTGAGAGGAAAGCCTGGCACGGACAACATTaGCAGATGCAACATAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITNVTSIKGRGCCSERKAWHGQH*QMQHSD Trigger: ATCACTATGTTGCATCTGTCAATGTTGTCCGTGCCA...GGCTTTCCTCTCACTACAGCAGCCCCTTCCTTTAATTGATGTTACATTTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTCTTGGGCTTCAGAGTTaGAGTCAGGAGGAAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSQIFELCGCYPLYEQFLGLQS*SQEEGH Trigger: ATGTCCTTCCTCCTGACTGCAACTCTGAAGCCCAAG...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTCAGAGAGGCTGTGAATaGATACCATGTCCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQSQIFELCGCYPLYEQFQRGCE*IPCPCC Trigger: GCAGCATGGACATGGTATCCATTCACAGCCTCTCTG...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAGCACCTCGAGATTTGTGAGCTTCTCTGGGACAGATGTTTATCACAAAGATTTGTTGAGCAATTaGGTTGAGGCTCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RESTSRFVSFSGTDVYHKDLLSN*VEAHLP Trigger: AGGAAGATGAGCCTCAACCCAATTGCTCAACAAATC...TTTGTGATAAACATCTGTCCCAGAGAAGCTCACAAATCTCGAGGTGCTTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGAGCTCAGAGAGGCTGTaGATGGATACCATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVSSERL*MDTMSM Trigger: CATGGACATGGTATCCATTCACAGCCTCTCTGAGCT...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | TTAATGATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGCTTGGGCTTCAGAGTTaGAGTCAGGAGGAAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LMMKCQRSLNNHKSSSSVLGLQS*SQEEGH Trigger: ATGTCCTTCCTCCTGACTGCAACTCTGAAGCCCAAG...CACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | CTGCATAGAGGATCTACAGAGACGATAAATAAGAGTGTTTGTAATCAGGTGAGTAAGATAGGGAACCTCTaGAAGATCCAGATGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHRGSTETINKSVCNQVSKIGNL*KIQMVL Trigger: CAGGACCATCTGGATCTTGCAGAGGTTCCCTATCTT...ACTCACCTGATTACAAACACTCTTATTTATCGTCTCTGTAGATCCTCTATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS-3UTR CCA 90 bp | CTGCATAGAGGATCTACAGAGACGATAAATAAGAGTGTTTGTAATCAGGTGAGTTCCTGGATTCCTTGTTaGCCAACTTCCCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRGSTETINKSVCNQVSSWIPC*PTSPSS Trigger: TGAAGAAGGGGAAGTTGGCCAACAAGGAATCCAGGA...ACTCACCTGATTACAAACACTCTTATTTATCGTCTCTGTAGATCCTCTATGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTCTTCACAGTTCTCAGTaGTTTTATGCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DEMPEKFEQSQIFELCGCLHSSQ*FYAEPS Trigger: TGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAG...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR TCA 90 bp | CTGCATAGAGGATCTACAGAGACGATAAATAAGAGTGTTTGTAATCAGGTGAGTCTTCACAGTTCTCAGTaGTTTTATGCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRGSTETINKSVCNQVSLHSSQ*FYAEPS Trigger: TGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAG...ACTCACCTGATTACAAACACTCTTATTTATCGTCTCTGTAGATCCTCTATGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR GCA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTGACAACATTGACAGATaGAACATAGTGATCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DEMPEKFEQSQIFELCGCDNIDR*NIVINP Trigger: GGGATTGATCACTATGTTGCATCTGTCAATGTTGTC...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| 3UTR CAA 72 bp | CAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATaGTATGAACAGTTTCTATCCCTCAATAGAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: QSQIFELCGCYP*YEQFLSLNRIH Trigger: ATGTATTCTATTGAGGGATAGAAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| 3UTR CAA 72 bp | CACAGATGTTTATTAATGATGAAATGCCAGAGAAGTTaGAACAATCACAAATCTTCGAGCTCTGTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRCLLMMKCQRS*NNHKSSSSVVV Trigger: AACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATCATTAATAAACATCTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | GGCGCTCCAGCTCAGAGAGGCTGTGAATGGATACCATGTCCATGCTaGGGTCTGAGTTCTGTCCTGGGGCTCCTCCCAGGACGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GAPAQRGCEWIPCPC*GLSSVLGLLPGRSH Trigger: GTGTGAGCGTCCTGGGAGGAGCCCCAGGACAGAACTCAGACCGCAGCATGGACATGGTATCCATTCACAGCCTCTCTGAGCTGGAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | GGGGGTTACCGGCTGCTCCTTCCTCTTTGTCAGGGGAACCAGCAGTaGTGGCAGGCACAGCAGGCTCCTCAGAGGGACCTTCATCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGYRLLLPLCQGNQQ*WQAQQAPQRDLHQR Trigger: CCTTTGATGAAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGCCGGTAACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042444.7 |
||
| CDS GCA 90 bp | GGGGGTTACCGGCTGCTCCTTCCTCTTTGTCAGGGGAACCAGCAGTaGTGGCAGGCACAGCAGGCTCCTCAGAGGGACCTGGGATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: GGYRLLLPLCQGNQQ*WQAQQAPQRDLGLH Trigger: ATGTAATCCCAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGCCGGTAACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | TCAGGCGCTCCAGCTCAGAGAGGCTGTGAATGGATACCATGTCCATaGTGCGGTCTGAGTTCTGTCCTGGGGCTCCTCCCAGGACGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGAPAQRGCEWIPCP*CGLSSVLGLLPGRS Trigger: TGAGCGTCCTGGGAGGAGCCCCAGGACAGAACTCAGACCGCAGCATGGACATGGTATCCATTCACAGCCTCTCTGAGCTGGAGCGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS GCA 90 bp | CAGCAGGGCTCCGTTCTCCAGTTCATCTGCGCTATCTGCAGAAACTaGACCTCGACGTCCACGGCGAGTGAACTCTCTAGGCAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QQGSVLQFICAICRN*TSTSTASELSRQGG Trigger: CCCACCCTGCCTAGAGAGTTCACTCGCCGTGGACGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAACTGGAGAACGGAGCCCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS CCA 90 bp | GGTTACCGGCTGCTCCTTCCTCTTTGTCAGGGGAACCAGCAGTGCTaGCAGGCACAGCAGGCTCCTCAGAGGGACCTTCATCAAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYRLLLPLCQGNQQC*QAQQAPQRDLHQRA Trigger: AGCCCTTTGATGAAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGCCGGTAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042444.7 |
||
| CDS CCA 90 bp | GGTTACCGGCTGCTCCTTCCTCTTTGTCAGGGGAACCAGCAGTGCTaGCAGGCACAGCAGGCTCCTCAGAGGGACCTGGGATTACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GYRLLLPLCQGNQQC*QAQQAPQRDLGLHQ Trigger: CTGATGTAATCCCAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGCCGGTAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | AGCCGCTGTCCAATAGGCGATGAAAGCTGGGAGAGCTGCAGGATCTaGAGCAGCAGGGCTCCGTTCTCCAGTTCATCTGCGCTATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRCPIGDESWESCRI*SSRAPFSSSSALSA Trigger: TGCAGATAGCGCAGATGAACTGGAGAACGGAGCCCTGCTGCTGCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAGCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS CCA 90 bp | CAGTCTCTTGCAGCTTCAGGCGCTCCAGCTCAGAGAGGCTGTGAATaGATACCATGTCCATGCTGCGGTCTGAGTTCTGTCCTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSLAASGAPAQRGCE*IPCPCCGLSSVLGL Trigger: GAGCCCCAGGACAGAACTCAGACCGCAGCATGGACATGGTATCCATTCACAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS GCA 90 bp | GAACCGTTGATATCTTCAACCTGCATCGTGGGTGTCAGTTCACGCTaGTTGCGACGGGTAAGCTCGTTCACCAGTACCTCTTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPLISSTCIVGVSSR*LRRVSSFTSTSSRR Trigger: CCGCCTGGAAGAGGTACTGGTGAACGAGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS GCA 90 bp | TTTCCCCGACGACGACGACCAGTAGAACCGTTGATATCTTCAACCTaGATCGTGGGTGTCAGTTCACGCTGCTTGCGACGGGTAAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FPRRRRPVEPLISST*IVGVSSRCLRRVSS Trigger: CGAGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTCTACTGGTCGTCGTCGTCGGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS TCA 90 bp | TCTCCAGGGTGTTTGGACGGTCAGTGGGTAGAGCTCTGTCCGGCTTaGATTCAGAGAGGAAATGTCTGGCCACGAGTTCGTGGTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGCLDGQWVELCPA*IQRGNVWPRVRGKQ Trigger: CTGCTTACCACGAACTCGTGGCCAGACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCTACCCACTGACCGTCCAAACACCCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS GCA 90 bp | TTCCTCCTGCGACTGAAAAAGCGCCTCATGCGTCCAAGCATTCTTTaGACCACGTTTCCCCGACGACGACGACCAGTAGAACCGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FLLRLKKRLMRPSIL*TTFPRRRRPVEPLI Trigger: TATCAACGGTTCTACTGGTCGTCGTCGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCGCAGGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTAAGCGGGTGGCAAATTaGCCCTTCTTCCCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCLTSCFADIRGVNTSCLKRVAN*PFFPWG Trigger: GCCCCAGGGGAAGAAGGGCAAATTTGCCACCCGCTT...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS TCA 90 bp | CTCGTTCACCAGTACCTCTTCCAGGCGGATGCCAAAGGTCTTGAGTaGTGCAGCCCTGTCTTGTCCTCTCAGCATCAAAAACCACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHQYLFQADAKGLE*CSPVLSSQHQKPLL Trigger: GAGAAGTGGTTTTTGATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTGGTGAACGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTGTGGTAAGCAGTCTCTaGCAGCTTCAGGCGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLTSCFADIRGVNTSCLVVSSL*QLQALQ Trigger: CTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCAC...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | GTATTTGGAATTCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTGCGTCCAAGCATTCTTaGCACCACGTTTCCCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: VFGIPILTRASGGTPSYPASKHS*HHVSPT Trigger: CGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGC...AGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGAATTCCAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTGAACACCAGCTGTCTTGCTGCTCCTTCCTCTTaGTCAGGGGAACCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLTSCFADIRGVNTSCLAAPSS*SGEPAV Trigger: CACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGC...AAGACAGCTGGTGTTCACACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS CCA 90 bp | TCCCCTTCTTCAGGAGAGCAGTTCCAAACACCAAAGCCAAGTTGGTaGAAGTCATTCGGTTACCTGGAACCAGCTGTCCATCAACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPSSGEQFQTPKPSW*KSFGYLEPAVHQRQ Trigger: TTGGCGTTGATGGACAGCTGGTTCCAGGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS CCA 90 bp | ACTTCCCCTTCTTCAGGAGAGCAGTTCCAAACACCAAAGCCAAGTTaGTGGAAGTCATTCGGTTACCTGGAACCAGCTGTCCATCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPSSGEQFQTPKPS*WKSFGYLEPAVHQR Trigger: GCGTTGATGGACAGCTGGTTCCAGGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAAGGGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | TCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTTAGTTCTTTATGTGGTAAGCAGTCTCTaGCAGCTTCAGGCGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHPDPSIRWNSFLSLVLYVVSSL*QLQALQ Trigger: CTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCAC...ATAAAGAACTAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGGCTGCTCCTTCCTCTTaGTCAGGGGAACCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQAAPSS*SGEPAV Trigger: CACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGC...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | AGGGAAAGCACCTCGAGATTTGTGAGCTTCTCTGGGACAGATGTTTATCACAAAAAGCGGGTGGCAAATTaGCCCTTCTTCCCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RESTSRFVSFSGTDVYHKKRVAN*PFFPWG Trigger: GCCCCAGGGGAAGAAGGGCAAATTTGCCACCCGCTT...TTTGTGATAAACATCTGTCCCAGAGAAGCTCACAAATCTCGAGGTGCTTTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS CCA 90 bp | TTCAAAGTCATAGTTCAGGTTATCATTCAAGACCTCGTGCACATCTaGGGCTCCTTCGGGGTCTTCATCAAAGGGCTGGCTCTGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKVIVQVIIQDLVHI*GSFGVFIKGLALSK Trigger: CTTGCTCAGAGCCAGCCCTTTGATGAAGACCCCGAAGGAGCCCCAGATGTGCACGAGGTCTTGAATGATAACCTGAACTATGACTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGAGGCTCATCTTCCTCTaGGATCCCAGAAGCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQRLIFL*DPRSRC Trigger: ACAGCGGCTTCTGGGATCCAAGAGGAAGATGAGCCT...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | TCCCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTATCCTTAGTTCTTTATAGGCTCATCTTCCTCTaGGATCCCAGAAGCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHPDPSIRWNSFLSLVLYRLIFL*DPRSRC Trigger: ACAGCGGCTTCTGGGATCCAAGAGGAAGATGAGCCT...ATAAAGAACTAAGGATAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAGGCAAGGTAGCACCAAGGCGCCTGGGCATGACACAGAAATAGCTCTGAACACCAAAGCCAAGTaGGTGGAAGTCATTCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KRRQGSTKAPGHDTEIALNTKAK*VEVIRL Trigger: TAACCGAATGACTTCCACCAACTTGGCTTTGGTGTT...CAGAGCTATTTCTGTGTCATGCCCAGGCGCCTTGGTGCTACCTTGCCTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS TCA 90 bp | GAACCAGCTGTCCATCAACGCCAATGGAGTCTTCACAGTTCTCAGTaGTTTTATGCAGAGCCTTCAGCAGACGTTCGAGAGTATCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: EPAVHQRQWSLHSSQ*FYAEPSADVREYHC Trigger: ACAGTGATACTCTCGAACGTCTGCTGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAGACTCCATTGGCGTTGATGGACAGCTGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | TGTCCATCAACGCCAATGGAGTCTTCACAGTTCTCAGTGATTTTATaGAGAGCCTTCAGCAGACGTTCGAGAGTATCACTGTGGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPSTPMESSQFSVIL*RAFSRRSRVSLWQG Trigger: ACCTTGCCACAGTGATACTCTCGAACGTCTGCTGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAGACTCCATTGGCGTTGATGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS CCA 90 bp | GAATTTGCAACAAGTCTCAACAATCTGAGGGATTTGTTGAGCAATTaGGTTGAGGCTCATCTTCCTCTTGGATCCCAGAAGCCGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EFATSLNNLRDLLSN*VEAHLPLGSQKPLS Trigger: GGACAGCGGCTTCTGGGATCCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGAGAGCTCTGTCCGGCTaGAATTCAGAGAGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQRALSG*NSERKC Trigger: ACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCT...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | CTACTTGAAACTATGTGTCTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTGTCTTCCTGGATTCCTaGTTGGCCAACTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLETMCLCLTSCFADIRGVFLDS*LANFPF Trigger: GAAGGGGAAGTTGGCCAACAAGGAATCCAGGAAGAC...ACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAGACACATAGTTTCAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAGAGCAAGTCCCGCAAATTTGTACCGTCCTGCATAGAGGATCTACAGAACACCAAAGCCAAGTaGGTGGAAGTCATTCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FYQSKSRKFVPSCIEDLQNTKAK*VEVIRL Trigger: TAACCGAATGACTTCCACCAACTTGGCTTTGGTGTT...CTGTAGATCCTCTATGCAGGACGGTACAAATTTGCGGGACTTGCTCTGGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | GAGGATGTCCCAGTTATCAATCATGGCACGGACAACATTGACAGATaGAACATAGTGATCAATCCCCAGTTTAGTCTTCCTGGATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDVPVINHGTDNIDR*NIVINPQFSLPGFL Trigger: AAGGAATCCAGGAAGACTAAACTGGGGATTGATCACTATGTTGCATCTGTCAATGTTGTCCGTGCCATGATTGATAACTGGGACATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS GCA 90 bp | GTCGGTATCTTCGTTGTTTGGAATTACATCAAGATAGGGAACCTCTaGAAGATCCAGATGGTCCTGGTCTTCAAAATCCGATTCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGIFVVWNYIKIGNL*KIQMVLVFKIRFVF Trigger: GAAGACGAATCGGATTTTGAAGACCAGGACCATCTGGATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAAACAACGAAGATACCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | CTACTTGAAACTATGTGTCTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTAGAGCTCTGTCCGGCTaGAATTCAGAGAGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLETMCLCLTSCFADIRGRALSG*NSERKC Trigger: ACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCT...ACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAGACACATAGTTTCAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
||
| CDS-3UTR CAA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTGTCTTCCTGGATTCCTaGTTGGCCAACTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EQSQIFELCGCYPLYEQFVFLDS*LANFPF Trigger: GAAGGGGAAGTTGGCCAACAAGGAATCCAGGAAGAC...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CAA 90 bp | CTACTTGAAACTATGTGTCTGTGCCTAACTAGTTGTTTTGCAGACATCAGGGGTACAATATCCAGGCCTTaGTCAAATAACTCACGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LLETMCLCLTSCFADIRGTISRP*SNNSRS Trigger: GCTCCGTGAGTTATTTGACAAAGGCCTGGATATTGT...ACCCCTGATGTCTGCAAAACAACTAGTTAGGCACAGACACATAGTTTCAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CAA 90 bp | GAACAATCACAAATCTTCGAGCTCTGTGGTTGTTACCCATTGTATGAACAGTTTACAATATCCAGGCCTTaGTCAAATAACTCACGGAGC | + |
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Preference number: 5 (lower is better) Translates to: EQSQIFELCGCYPLYEQFTISRP*SNNSRS Trigger: GCTCCGTGAGTTATTTGACAAAGGCCTGGATATTGT...AAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGATTTGTGATTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS-3UTR CAA 90 bp | GATGAAATGCCAGAGAAGTTTGAACAATCACAAATCTTCGAGCTCTGTGGTTGTCGGTATCTTCGTTGTTaGGAATTACATCAAGATAGG | + |
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Preference number: 5 (lower is better) Translates to: DEMPEKFEQSQIFELCGCRYLRC*ELHQDR Trigger: CCTATCTTGATGTAATTCCAAACAACGAAGATACCG...ACAACCACAGAGCTCGAAGATTTGTGATTGTTCAAACTTCTCTGGCATTTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
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| CDS GCA 72 bp | CGGCTGCTCCTTCCTCTTTGTCAGGGGAACCAGCAGTaGTGGCAGGCACAGCAGGCTCCTCAGAGGGACCTT | + |
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Preference number: 6 (lower is better) Translates to: RLLLPLCQGNQQ*WQAQQAPQRDL Trigger: AAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTGACAAAGAGGAAGGAGCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042444.7 |
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| CDS TCA 72 bp | GAGGCTGTGAATGGATACCATGTCCATGCTGCGGTCTaGGTTCTGTCCTGGGGCTCCTCCCAGGACGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: EAVNGYHVHAAV*VLSWGSSQDAH Trigger: GTGAGCGTCCTGGGAGGAGCCCCAGGACAGAACTCAGACCGCAGCATGGACATGGTATCCATTCACAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS TCA 72 bp | CCTCTTGGATCCCAGAAGCCGCTGTCCAATAGGCGATaGAAGCTGGGAGAGCTGCAGGATCTGCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLGSQKPLSNRR*KLGELQDLQQQ Trigger: CTGCTGCTGCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAGCGGCTTCTGGGATCCAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS GCA 72 bp | CAGCAGGGCTCCGTTCTCCAGTTCATCTGCGCTATCTaGAGAAACTGCACCTCGACGTCCACGGCGAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QQGSVLQFICAI*RNCTSTSTASE Trigger: TTCACTCGCCGTGGACGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAACTGGAGAACGGAGCCCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | GAAATGTCTGGCCACGAGTTCGTGGTAAGCAGTCTCTaGCAGCTTCAGGCGCTCCAGCTCAGAGAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EMSGHEFVVSSL*QLQALQLREAV Trigger: CACAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGACATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | CCGTTGATATCTTCAACCTGCATCGTGGGTGTCAGTTCACGCTGCTaGCGACGGGTAAGCTCGTTCACCAGTACCTCTTCCAGGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: PLISSTCIVGVSSRC*RRVSSFTSTSSRRM Trigger: CATCCGCCTGGAAGAGGTACTGGTGAACGAGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS TCA 72 bp | TCTTGCAGCTTCAGGCGCTCCAGCTCAGAGAGGCTGTaGATGGATACCATGTCCATGCTGCGGTCTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SCSFRRSSSERL*MDTMSMLRSEF Trigger: GAACTCAGACCGCAGCATGGACATGGTATCCATTCACAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS GCA 72 bp | TCCGTTCTCCAGTTCATCTGCGCTATCTGCAGAAACTaGACCTCGACGTCCACGGCGAGTGAACTCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SVLQFICAICRN*TSTSTASELSR Trigger: CCTAGAGAGTTCACTCGCCGTGGACGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAACTGGAGAACGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | TCTTCAACCTGCATCGTGGGTGTCAGTTCACGCTGCTaGCGACGGGTAAGCTCGTTCACCAGTACCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSTCIVGVSSRC*RRVSSFTSTSS Trigger: GGAAGAGGTACTGGTGAACGAGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | GCGACTGAAAAAGCGCCTCATGCGTCCAAGCATTCTTaGCACCACGTTTCCCCGACGACGACGACCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: ATEKAPHASKHS*HHVSPTTTTSR Trigger: TCTACTGGTCGTCGTCGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS TCA 72 bp | TCACCAGTACCTCTTCCAGGCGGATGCCAAAGGTCTTaGGTGATGCAGCCCTGTCTTGTCCTCTCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: SPVPLPGGCQRS*VMQPCLVLSAS Trigger: TGATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS GCA 72 bp | CGACTGAAAAAGCGCCTCATGCGTCCAAGCATTCTTTaGACCACGTTTCCCCGACGACGACGACCAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: RLKKRLMRPSIL*TTFPRRRRPVE Trigger: TTCTACTGGTCGTCGTCGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | GTGTTTGGACGGTCAGTGGGTAGAGCTCTGTCCGGCTaGAATTCAGAGAGGAAATGTCTGGCCACGAGTTCG | + |
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Preference number: 6 (lower is better) Translates to: VFGRSVGRALSG*NSERKCLATSS Trigger: CGAACTCGTGGCCAGACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCTACCCACTGACCGTCCAAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | TTCACCAGTACCTCTTCCAGGCGGATGCCAAAGGTCTaGAGTGATGCAGCCCTGTCTTGTCCTCTCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: FTSTSSRRMPKV*SDAALSCPLSI Trigger: GATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | TTCAGAGAGGAAATGTCTGGCCACGAGTTCGTGGTAAGCAGTCTCTaGCAGCTTCAGGCGCTCCAGCTCAGAGAGGCTGTGAATGGATAC | + |
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Preference number: 6 (lower is better) Translates to: FREEMSGHEFVVSSL*QLQALQLREAVNGY Trigger: GTATCCATTCACAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGACATTTCCTCTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | ATTCCTCCTGCGACTGAAAAAGCGCCTCATGCGTCCAAGCATTCTTaGCACCACGTTTCCCCGACGACGACGACCAGTAGAACCGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: IPPATEKAPHASKHS*HHVSPTTTTSRTVD Trigger: ATCAACGGTTCTACTGGTCGTCGTCGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCGCAGGAGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS TCA 72 bp | TGTTTGGACGGTCAGTGGGTAGAGCTCTGTCCGGCTTaGATTCAGAGAGGAAATGTCTGGCCACGAGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: CLDGQWVELCPA*IQRGNVWPRVR Trigger: ACGAACTCGTGGCCAGACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCTACCCACTGACCGTCCAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS GCA 72 bp | ATATCTTCAACCTGCATCGTGGGTGTCAGTTCACGCTaGTTGCGACGGGTAAGCTCGTTCACCAGTACCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISSTCIVGVSSR*LRRVSSFTSTS Trigger: AGAGGTACTGGTGAACGAGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | ACCACGTTTCCCCGACGACGACGACCAGTAGAACCGTaGATATCTTCAACCTGCATCGTGGGTGTCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TTFPRRRRPVEP*ISSTCIVGVSS Trigger: TGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTCTACTGGTCGTCGTCGTCGGGGAAACGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | GTAAGCTCGTTCACCAGTACCTCTTCCAGGCGGATGCCAAAGGTCTaGAGTGATGCAGCCCTGTCTTGTCCTCTCAGCATCAAAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: VSSFTSTSSRRMPKV*SDAALSCPLSIKNH Trigger: GTGGTTTTTGATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTGGTGAACGAGCTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | ATTCTTTGCACCACGTTTCCCCGACGACGACGACCAGTAGAACCGTaGATATCTTCAACCTGCATCGTGGGTGTCAGTTCACGCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ILCTTFPRRRRPVEP*ISSTCIVGVSSRCL Trigger: CAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTCTACTGGTCGTCGTCGTCGGGGAAACGTGGTGCAAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS TCA 72 bp | CAGTACCTCTTCCAGGCGGATGCCAAAGGTCTTGAGTaGTGCAGCCCTGTCTTGTCCTCTCAGCATCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: QYLFQADAKGLE*CSPVLSSQHQK Trigger: TTTTTGATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | AACTTCCCCTTCTTCAGGAGAGCAGTTCCAAACACCAAAGCCAAGTaGGTGGAAGTCATTCGGTTACCTGGAACCAGCTGTCCATCAACG | + |
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Preference number: 6 (lower is better) Translates to: NFPFFRRAVPNTKAK*VEVIRLPGTSCPST Trigger: CGTTGATGGACAGCTGGTTCCAGGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAAGGGGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS CCA 72 bp | TCAGGAGAGCAGTTCCAAACACCAAAGCCAAGTTGGTaGAAGTCATTCGGTTACCTGGAACCAGCTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SGEQFQTPKPSW*KSFGYLEPAVH Trigger: ATGGACAGCTGGTTCCAGGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS TCA 72 bp | GGAGCTCAAGCACCCTCCGCAGAGAGTATTCAATGGTaGAAATCCCCACTGAGCTTAAGCCATGTTTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: GAQAPSAESIQW*KSPLSLSHVSQ Trigger: TTGAGAAACATGGCTTAAGCTCAGTGGGGATTTTCACCATTGAATACTCTCTGCGGAGGGTGCTTGAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS TCA 72 bp | GTCCATCAACGCCAATGGAGTCTTCACAGTTCTCAGTaGTTTTATGCAGAGCCTTCAGCAGACGTTCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VHQRQWSLHSSQ*FYAEPSADVRE Trigger: CTCTCGAACGTCTGCTGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAGACTCCATTGGCGTTGATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS TCA 72 bp | AGGCTCCTCAGAGGGACCTGGGATTACATCAGCGTCTaGGTCGGTATCTTCGTTGTTTGGAATTACATCAAG | + |
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Preference number: 6 (lower is better) Translates to: RLLRGTWDYISV*VGIFVVWNYIK Trigger: CTTGATGTAATTCCAAACAACGAAGATACCGACTCAGACGCTGATGTAATCCCAGGTCCCTCTGAGGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
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| CDS CAA 72 bp | TTCTTCAGGAGAGCAGTTCCAAACACCAAAGCCAAGTaGGTGGAAGTCATTCGGTTACCTGGAACCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FFRRAVPNTKAK*VEVIRLPGTSC Trigger: ACAGCTGGTTCCAGGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 |
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| CDS CAA 90 bp | AGGGACCTGGGATTACATCAGCGTCTGAGTCGGTATCTTCGTTGTTaGGAATTACATCAAGATAGGGAACCTCTGCAAGATCCAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RDLGLHQRLSRYLRC*ELHQDREPLQDPDG Trigger: ACCATCTGGATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAAACAACGAAGATACCGACTCAGACGCTGATGTAATCCCAGGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
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| CDS CCA 72 bp | ACAAGTCTCAACAATCTGAGGGATTTGTTGAGCAATTaGGTTGAGGCTCATCTTCCTCTTGGATCCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TSLNNLRDLLSN*VEAHLPLGSQK Trigger: CTTCTGGGATCCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS GCA 72 bp | TTCGTTGTTTGGAATTACATCAAGATAGGGAACCTCTaGAAGATCCAGATGGTCCTGGTCTTCAAAATCCGA | + |
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Preference number: 6 (lower is better) Translates to: FVVWNYIKIGNL*KIQMVLVFKIR Trigger: TCGGATTTTGAAGACCAGGACCATCTGGATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAAACAACGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
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| CDS CAA 72 bp | GAATTTGCAACAAGTCTCAACAATCTGAGGGATTTGTaGAGCAATTGGGTTGAGGCTCATCTTCCTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: EFATSLNNLRDL*SNWVEAHLPLG Trigger: TCCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | GGATTACATCAGCGTCTGAGTCGGTATCTTCGTTGTTaGGAATTACATCAAGATAGGGAACCTCTGCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GLHQRLSRYLRC*ELHQDREPLQD Trigger: ATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAAACAACGAAGATACCGACTCAGACGCTGATGTAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114904.10 |
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| CDS CAA 90 bp | TTTCTCAATGAATTTGCAACAAGTCTCAACAATCTGAGGGATTTGTaGAGCAATTGGGTTGAGGCTCATCTTCCTCTTGGATCCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FLNEFATSLNNLRDL*SNWVEAHLPLGSQK Trigger: CTTCTGGGATCCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTCATTGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 90 bp | ATGTTTCTCAATGAATTTGCAACAAGTCTCAACAATCTGAGGGATTaGTTGAGCAATTGGGTTGAGGCTCATCTTCCTCTTGGATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: MFLNEFATSLNNLRD*LSNWVEAHLPLGSQ Trigger: CTGGGATCCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTCATTGAGAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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| CDS CAA 72 bp | AATGAATTTGCAACAAGTCTCAACAATCTGAGGGATTaGTTGAGCAATTGGGTTGAGGCTCATCTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: NEFATSLNNLRD*LSNWVEAHLPL Trigger: AAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042444.7 ENSMUST00000114904.10 ENSMUST00000130558.8 |
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