RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP35 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058230

Ensembl transcript IDs: ENSMUST00000075845.11, ENSMUST00000171937.2

Found 576 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAAGGCGAGGGCTCACAGCTTGCCACAGCCATAGCCAGGGCAGGTaGAGAGCAGGTGCTCAACTGCCCAGCCATGGGGGACACTGGCTA +
Preference number: 1 (lower is better)
Translates to: TRRGLTACHSHSQGR*RAGAQLPSHGGHWL
Trigger: TAGCCAGTGTCCCCCATGGCTGGGCAGTTGAGCACCTGCTCTTCACCTGCCCTGGCTATGGCTGTGGCAAGCTGTGAGCCCTCGCCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 90 bp GGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTaGTGTTGGGCCATGCCAGTGACCCAGTGTGTCCTACGGGGTAGC +
Preference number: 1 (lower is better)
Translates to: GKPHTGYRHKALLLL*CWAMPVTQCVLRGS
Trigger: GCTACCCCGTAGGACACACTGGGTCACTGGCATGGCCCAACAGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 90 bp CGTGCCTGCCTCTGCCTGCCACCCACTGCCAACATAATAGGCACATaGAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCT +
Preference number: 1 (lower is better)
Translates to: RACLCLPPTANIIGT*SSLPWFITVHSRMA
Trigger: AGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTGCCTATTATGTTGGCAGTGGGTGGCAGGCAGAGGCAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 90 bp AGCAGGGCTCTACTAATCGCGTGCCTGCCTCTGCCTGCCACCCACTaGCAACATAATAGGCACATGCAGCAGCCTCCCCTGGTTCATAAC +
Preference number: 1 (lower is better)
Translates to: SRALLIACLPLPATH*QHNRHMQQPPLVHN
Trigger: GTTATGAACCAGGGGAGGCTGCTGCATGTGCCTATTATGTTGGCAGTGGGTGGCAGGCAGAGGCAGGCACGCGATTAGTAGAGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 90 bp GACAGGCTATGGTCACCTCCAGGGCTTTCTGGGAAGGGCAGTAGCTaGCCTGGCCACCCACTCAAGCCTGATTGTTCTGACTTCTGTGGT +
Preference number: 1 (lower is better)
Translates to: DRLWSPPGLSGKGSS*PGHPLKPDCSDFCG
Trigger: ACCACAGAAGTCAGAACAATCAGGCTTGAGTGGGTGGCCAGGTCAGCTACTGCCCTTCCCAGAAAGCCCTGGAGGTGACCATAGCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 90 bp GTGAAGGTTCTAAGACCGTCTGCTAGTGCTGCTGTCTGCCTTGGCTaGGGAAAATGGAGAGTGTGGGGTCAGACAGAGCTCCAGACCTTT +
Preference number: 1 (lower is better)
Translates to: VKVLRPSASAAVCLG*GKWRVWGQTELQTF
Trigger: AAAGGTCTGGAGCTCTGTCTGACCCCACACTCTCCATTTTCCCCAGCCAAGGCAGACAGCAGCACTAGCAGACGGTCTTAGAACCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 90 bp TGGAGGAGCTCCATCTTTCTTCCAGTGTTCCTTTGCTGCAGGGAATaGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCACACACTGG +
Preference number: 1 (lower is better)
Translates to: WRSSIFLPVFLCCRE*ITSLGRGWRKATHW
Trigger: CCAGTGTGTGGCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGGAAGAAAGATGGAGCTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR TCA 90 bp AAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATAGCTaGGGCTTGGGGCATGAAGTCAGGGCAGGGGACCAACTGCAACCT +
Preference number: 1 (lower is better)
Translates to: KGPTQKLLNGSHSNS*GLGHEVRAGDQLQP
Trigger: AGGTTGCAGTTGGTCCCCTGCCCTGACTTCATGCCCCAAGCCTCAGCTATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 90 bp CTGTGTGCACACACCTGTAGTGTTTCTATAGTAGTGTATGTAGTGTaGTGGTTGGCAGGAGGGGTGGGGGCCATGCTAACAATCCTTCCA +
Preference number: 1 (lower is better)
Translates to: LCAHTCSVSIVVYVV*WLAGGVGAMLTILP
Trigger: TGGAAGGATTGTTAGCATGGCCCCCACCCCTCCTGCCAACCAGCACACTACATACACTACTATAGAAACACTACAGGTGTGTGCACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 90 bp CCAATAGCTGAGGCTTGGGGCATGAAGTCAGGGCAGGGGACCAACTaGAACCTTAGCGGACACTACACACATTGTATGTTCCTATTGACT +
Preference number: 1 (lower is better)
Translates to: PIAEAWGMKSGQGTN*NLSGHYTHCMFLLT
Trigger: AGTCAATAGGAACATACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCATGCCCCAAGCCTCAGCTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 90 bp GCTAGCCTTCTCACTTCTTACAACTTTCCAAAGCTTCTGGCCATCTaGAGTTCTCCGACTTCTGTCCTCTCAACACGGCTGCAGAGGATG +
Preference number: 1 (lower is better)
Translates to: ASLLTSYNFPKLLAI*SSPTSVLSTRLQRM
Trigger: CATCCTCTGCAGCCGTGTTGAGAGGACAGAAGTCGGAGAACTGCAGATGGCCAGAAGCTTTGGAAAGTTGTAAGAAGTGAGAAGGCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 90 bp CAGAATCTCAGCAGGCCTGAGTTACAGTATTCTAGAGCACTGGAATaGAGGCAGAGGAAAGAGCACTTGCCACCATCTGGGATCCAGATG +
Preference number: 1 (lower is better)
Translates to: QNLSRPELQYSRALE*RQRKEHLPPSGIQM
Trigger: CATCTGGATCCCAGATGGTGGCAAGTGCTCTTTCCTCTGCCTCCATTCCAGTGCTCTAGAATACTGTAACTCAGGCCTGCTGAGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 90 bp TCCATCAGAATCTCAGCAGGCCTGAGTTACAGTATTCTAGAGCACTaGAATGGAGGCAGAGGAAAGAGCACTTGCCACCATCTGGGATCC +
Preference number: 1 (lower is better)
Translates to: SIRISAGLSYSILEH*NGGRGKSTCHHLGS
Trigger: GGATCCCAGATGGTGGCAAGTGCTCTTTCCTCTGCCTCCATTCCAGTGCTCTAGAATACTGTAACTCAGGCCTGCTGAGATTCTGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 90 bp AAACAAAAACACTTCTGTCAGAGATGTCTTGGCTGCCAGGATGGCTaGCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTA +
Preference number: 1 (lower is better)
Translates to: KQKHFCQRCLGCQDG*PCTKQAGASETHDV
Trigger: TACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGACAGAAGTGTTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 90 bp TCTTTCTTCCAGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTaGGAAGGGGTTGGAGGAAAGCCACACACTGGGTATAGGCACAAA +
Preference number: 1 (lower is better)
Translates to: SFFQCSFAAGNGSQV*EGVGGKPHTGYRHK
Trigger: TTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGGAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 90 bp CACCTTATGTTGCCAAGTATTAGAGATAGGGAGACAGCCAGGACCTaGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAGATAAAG +
Preference number: 1 (lower is better)
Translates to: HLMLPSIRDRETART*ARGQSSSSYPTEIK
Trigger: CTTTATCTCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCCCTATCTCTAATACTTGGCAACATAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 90 bp TTTAGGTGGCTAGCCTTCTCACTTCTTACAACTTTCCAAAGCTTCTaGCCATCTGCAGTTCTCCGACTTCTGTCCTCTCAACACGGCTGC +
Preference number: 1 (lower is better)
Translates to: FRWLAFSLLTTFQSF*PSAVLRLLSSQHGC
Trigger: GCAGCCGTGTTGAGAGGACAGAAGTCGGAGAACTGCAGATGGCCAGAAGCTTTGGAAAGTTGTAAGAAGTGAGAAGGCTAGCCACCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 90 bp CTGCTGGGGAAGTGTCTGGGTTGGGTCACTGTGATGACCTTTGCTTaGGAACAGGTCCCTTCATTCCATAACCAGATGATCATTTCTGGA +
Preference number: 1 (lower is better)
Translates to: LLGKCLGWVTVMTFA*EQVPSFHNQMIISG
Trigger: TCCAGAAATGATCATCTGGTTATGGAATGAAGGGACCTGTTCTCAAGCAAAGGTCATCACAGTGACCCAACCCAGACACTTCCCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 90 bp AAACACTTCTGTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATaGACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAA +
Preference number: 1 (lower is better)
Translates to: KHFCQRCLGCQDGCP*TKQAGASETHDVFK
Trigger: TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGACAGAAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 90 bp GAAATGAAGCAGACATTCCTAACAGCAACTAGAGAGGTCCTGGTTTaGGCCCCCATGATACAGGAAATCATCGTTACACTTGCTTTACAG +
Preference number: 1 (lower is better)
Translates to: EMKQTFLTATREVLV*APMIQEIIVTLALQ
Trigger: CTGTAAAGCAAGTGTAACGATGATTTCCTGTATCATGGGGGCTCAAACCAGGACCTCTCTAGTTGCTGTTAGGAATGTCTGCTTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 90 bp GGTCCTGGTTTGAGCCCCCATGATACAGGAAATCATCGTTACACTTaGTTTACAGACAGGTTTCCACTTTTGCTGCGAAACATAAGTTTG +
Preference number: 1 (lower is better)
Translates to: GPGLSPHDTGNHRYT*FTDRFPLLLRNISL
Trigger: CAAACTTATGTTTCGCAGCAAAAGTGGAAACCTGTCTGTAAAGCAAGTGTAACGATGATTTCCTGTATCATGGGGGCTCAAACCAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 90 bp CCAGGAAGGAAAACATTTATGTGTAACACATTTGTACCTTGGGTTTaGTTTGTCTTGGAGTTTACTTTGCAGGGGGCAGCCTTAGTGTTT +
Preference number: 1 (lower is better)
Translates to: PGRKTFMCNTFVPWV*FVLEFTLQGAALVF
Trigger: AAACACTAAGGCTGCCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATGTGTTACACATAAATGTTTTCCTTCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR TCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGCTGAGGCTTGGGGCATaGAGTCAGGGCAGGGGACCA +
Preference number: 2 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRLRLGA*SQGRGP
Trigger: TGGTCCCCTGCCCTGACTTCATGCCCCAAGCCTCAG...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCTCAACTGCCCAGCCATaGGGGACACTGGCTAGTGCC +
Preference number: 2 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPSTAQP*GTLASA
Trigger: GGCACTAGCCAGTGTCCCCCATGGCTGGGCAGTTGA...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATCAACTGCCCAGCCATaGGGGACACTGGCTAGTGCC +
Preference number: 2 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVSTAQP*GTLASA
Trigger: GGCACTAGCCAGTGTCCCCCATGGCTGGGCAGTTGA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTGCTTGGGGTTACCTCTaGCCCTGGCAGAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCAWGYL*PWQRLG
Trigger: CCCCAGCCTCTGCCAGGGGCAGAGGTAACCCCAAGC...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGTGCAGGCAGACAGGTTaGGCCAAGGGGTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRCRQTG*AKGSKE
Trigger: CTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCA...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR TCA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTCCCGATGGTGGGGCCTaGCGCTGGTGCAGGCAGACA +
Preference number: 2 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTPDGGA*RWCRQT
Trigger: TGTCTGCCTGCACCAGCGTCAGGCCCCACCATCGGG...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGGCTCTCCTCTTGCTGTaGTGTTGGGCCATGCCAGTG +
Preference number: 2 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRALLLL*CWAMPV
Trigger: CACTGGCATGGCCCAACAGCACAGCAAGAGGAGAGC...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR TCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGCCCGATGGTGGGGCCTaGCGCTGGTGCAGGCAGACA +
Preference number: 2 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLPDGGA*RWCRQT
Trigger: TGTCTGCCTGCACCAGCGTCAGGCCCCACCATCGGG...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAGGAGGGGGCTGTGGTTaGAGTTACTGCCCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRGGGCG*SYCPGV
Trigger: GACACCTGGGCAGTAACTGCAACCACAGCCCCCTCC...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR TCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATGGCAGAGGCTGGGGTaGTGTCCCGATGGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEWQRLG*CPDGGA
Trigger: GGCCCCACCATCGGGACATCACCCCAGCCTCTGCCA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCTCTAAAGTGCAATGGTaGGACCCATGCCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPSKVQW*DPCPSY
Trigger: ATAGGAGGGGCATGGGTCGCACCATTGCACTTTAGA...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTTACCCAGTGGCCACCTaGCAGGTCAGAGTGGAAACT +
Preference number: 2 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSYPVAT*QVRVET
Trigger: AGTTTCCACTCTGACCTGCCAGGTGGCCACTGGGTA...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR TCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTTGGCAGAGGCTGGGGTaGTGTCCCGATGGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTWQRLG*CPDGGA
Trigger: GGCCCCACCATCGGGACATCACCCCAGCCTCTGCCA...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATTGTTCAAGGCCAAATaGCACCCTGTCAAGAAGACG +
Preference number: 2 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVLFKAK*HPVKKT
Trigger: CGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTGCTTGGGGTTACCTCTaGCCCTGGCAGAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAAWGYL*PWQRLG
Trigger: CCCCAGCCTCTGCCAGGGGCAGAGGTAACCCCAAGC...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGTGTGGTTGCAGTTACTaGCCAGGTGTCCTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRCGCSY*PGVLAL
Trigger: CAAAGCAAGGACACCTGGGCAGTAACTGCAACCACA...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCGTGATGTCCCGATGGTaGGGCCTGACGCTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESVMSRW*GLTLVQ
Trigger: CTGCACCAGCGTCAGGCCCCACCATCGGGACATCAC...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 90 bp GTTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTaGCTGTGCTGTTGGGCCATGCCAGTGACCCAGTGTGTCCTACGG +
Preference number: 2 (lower is better)
Translates to: VGGKPHTGYRHKALL*LCCWAMPVTQCVLR
Trigger: CCGTAGGACACACTGGGTCACTGGCATGGCCCAACAGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAAAAGGCGCTTGGCTGTaGCTTCCACCCCAGGGGACC +
Preference number: 2 (lower is better)
Translates to: VFLCCREWITSLGRGWRKKGAWL*LPPQGT
Trigger: GGTCCCCTGGGGTGGAAGTCACAGCCAAGCGCCTTT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR TCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCGTCAGAGTGGAAACTTaGGGTCTGTTTTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPVRVET*GLFSCC
Trigger: ACAGCAAGAAAACAGACCTCAAGTTTCCACTCTGAC...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGCACTGTGATGACCTTTaGTTGAGAACAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRHCDDL*LRTGPF
Trigger: GAAGGGACCTGTTCTCAAGCAAAGGTCATCACAGTG...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCCAGTGTTCCTTTGCTaGAGGGAATGGATCACAAGT +
Preference number: 2 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSPVFLC*REWITS
Trigger: ACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGTTTCAACACCAAACATaGCAACCTGAGTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRFQHQT*QPECCV
Trigger: CACACAGCACTCAGGTTGGCATGTTTGGTGTTGAAA...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp GGCTGCCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAAGTGATGTCCCGATGGTaGGGCCTGACGCTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GCPCTKQAGASETHDVFKVMSRW*GLTLVQ
Trigger: CTGCACCAGCGTCAGGCCCCACCATCGGGACATCAC...TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGGGGGCCAGCCCTGCTTaGGGTTACCTCTGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLGASPA*GYLCPW
Trigger: CCAGGGGCAGAGGTAACCCCAAGCAGGGCTGGCCCC...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCCAGATGATCATTTCTaGAAGATGCCACATCTGCTC +
Preference number: 2 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSPDDHF*KMPHLL
Trigger: GAGCAGATGTGGCATCTTCCAGAAATGATCATCTGG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTGTATGGGGAGGCTGCTaGGGAAGTGTCTGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTVWGGC*GSVWVG
Trigger: CCCAACCCAGACACTTCCCCAGCAGCCTCCCCATAC...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGACGATTGGTTTTCCTaGTTCCTGGGCTGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: VFLCCREWITSLGRGWRKDDWFS*FLGCGG
Trigger: GCCACCACAGCCCAGGAAGCAGGAAAACCAATCGTC...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTCAGGTGAAGAGCAGGTaGTCAACTGCCCAGCCATGG +
Preference number: 2 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTQVKSR*STAQPW
Trigger: CCATGGCTGGGCAGTTGAGCACCTGCTCTTCACCTG...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp GTGATAGCCATGTGCCCACACTCACAACCACTCAAACTTCCTTACACAGATGTTCCCCTGCCCTCCCCATaGACACTGGCAGTGGATGTG +
Preference number: 2 (lower is better)
Translates to: VIAMCPHSQPLKLPYTDVPLPSP*TLAVDV
Trigger: CACATCCACTGCCAGTGTGCATGGGGAGGGCAGGGG...AACATCTGTGTAAGGAAGTTTGAGTGGTTGTGAGTGTGGGCACATGGCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGGCAGTGGATGTGGAATaGAGAACCACTTTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: VRDVLAARMAAHALNRLEAVDVE*RTTFFH
Trigger: GTGGAAGAAAGTGGTTCTCCATTCCACATCCACTGC...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTaGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: SVPLLQGMDHKSGKG*EESHTLGIGTKLSS
Trigger: AGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp GGCTGCCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAAGACGATTGGTTTTCCTaGTTCCTGGGCTGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: GCPCTKQAGASETHDVFKDDWFS*FLGCGG
Trigger: GCCACCACAGCCCAGGAAGCAGGAAAACCAATCGTC...TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp CCAGCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTGCACCACAGTTACTCTGTTCACAGCAGGATaGCTCCACTTCCATCTCTAC +
Preference number: 2 (lower is better)
Translates to: PAVSAHLVLGLHVCTTVTLFTAG*LHFHLY
Trigger: GTAGAGATGGAAGTGGAGCCATCCTGCTGTGAACAG...AGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CAA 90 bp CTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTaGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGAAACTTGAG +
Preference number: 2 (lower is better)
Translates to: LPRCPCFAVIHRQKD*FTQWPPGRSEWKLE
Trigger: CTCAAGTTTCCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATGAGCAGGTGCTCAACTaGCCAGCCATGGGGGACACT +
Preference number: 2 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNEQVLN*PAMGDT
Trigger: AGTGTCCCCCATGGCTGGGCAGTTGAGCACCTGCTC...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGCAGGTGAAGAGCAGGTaGTCAACTGCCCAGCCATGG +
Preference number: 2 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLQVKSR*STAQPW
Trigger: CCATGGCTGGGCAGTTGAGCACCTGCTCTTCACCTG...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR TCA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTCAACACAGAAGCTACTaGATGGAAGCCATTCCAATA +
Preference number: 2 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTQHRSY*MEAIPI
Trigger: TATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTG...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAATTGTTCAAGGCCAAATaGCACCCTGTCAAGAAGACG +
Preference number: 2 (lower is better)
Translates to: VFLCCREWITSLGRGWRKLFKAK*HPVKKT
Trigger: CGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR GCA 90 bp GTGATAGCCATGTGCCCACACTCACAACCACTCAAACTTCCTTACACAGATGTTGCTAGTGCTGCTGTCTaGCTTGGCTGGGGAAAATGG +
Preference number: 2 (lower is better)
Translates to: VIAMCPHSQPLKLPYTDVASAAV*LGWGKW
Trigger: CCATTTTCCCCAGCCAAGGCAGACAGCAGCACTAGC...AACATCTGTGTAAGGAAGTTTGAGTGGTTGTGAGTGTGGGCACATGGCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTCTTTGCTGCAGGGAATaGATCACAAGTCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTLCCRE*ITSLGR
Trigger: CCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAG...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CAA 90 bp AACAATAACTTATGTCCTGGCTCCACTACTTGGGTGGCTTCATGGTaGGGTAATAGTGCCTCTAGCCTTAGCCTCTCTACAGTGTCCCTG +
Preference number: 2 (lower is better)
Translates to: NNNLCPGSTTWVASW*GNSASSLSLSTVSL
Trigger: CAGGGACACTGTAGAGAGGCTAAGGCTAGAGGCACTATTACCCAACCATGAAGCCACCCAAGTAGTGGAGCCAGGACATAAGTTATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGATCATTTCTGGAAGATaGCACATCTGCTCATATCCC +
Preference number: 2 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLIISGR*HICSYP
Trigger: GGGATATGAGCAGATGTGGCATCTTCCAGAAATGAT...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATTACCCAGTGGCCACCTaGCAGGTCAGAGTGGAAACT +
Preference number: 2 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNYPVAT*QVRVET
Trigger: AGTTTCCACTCTGACCTGCCAGGTGGCCACTGGGTA...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATGACTTGTTTACCCAGTaGCCACCTGGCAGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNDLFTQ*PPGRSE
Trigger: CTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTC...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR GCA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATAGAGTATGGGGAGGCTaGTGGGGAAGTGTCTGGGTT +
Preference number: 2 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNRVWGG*WGSVWV
Trigger: AACCCAGACACTTCCCCAGCAGCCTCCCCATACTCT...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGGTTGCATTCATAACATaGAATGAAATGACCCCATTT +
Preference number: 2 (lower is better)
Translates to: VRDVLAARMAAHALNRLEVAFIT*NEMTPF
Trigger: AAATGGGGTCATTTCATTCCATGTTATGAATGCAAC...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATTTGCCTTGTCATGGGTaGGAAGGACACTCAGAGTGC +
Preference number: 2 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNLPCHG*EGHSEC
Trigger: GCACTCTGAGTGTCCTTCCCACCCATGACAAGGCAA...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGAATGGATCACAAGTCTaGGAAGGGGTTGGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLNGSQV*EGVGGK
Trigger: CTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATT...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CCA 90 bp GTGATAGCCATGTGCCCACACTCACAACCACTCAAACTTCCTTACACAGATGTTGTAGAGATGAGAAGGTaGGACAGTGCAGACAGAATG +
Preference number: 2 (lower is better)
Translates to: VIAMCPHSQPLKLPYTDVVEMRR*DSADRM
Trigger: CATTCTGTCTGCACTGTCCCACCTTCTCATCTCTAC...AACATCTGTGTAAGGAAGTTTGAGTGGTTGTGAGTGTGGGCACATGGCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR TCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGGTCAGAGTGGAAACTTaGGGTCTGTTTTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLVRVET*GLFSCC
Trigger: ACAGCAAGAAAACAGACCTCAAGTTTCCACTCTGAC...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 90 bp TCCAACACAGACCCCCAGGAAGGAAAACATTTATGTGTAACACATTaGTACCTTGGGTTTGGTTTGTCTTGGAGTTTACTTTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SNTDPQEGKHLCVTH*YLGFGLSWSLLCRG
Trigger: CCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATGTGTTACACATAAATGTTTTCCTTCCTGGGGGTCTGTGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp CTGCCCCTGGCAGAGGCTGGGGTGATGTCCCGATGGTaGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGC +
Preference number: 3 (lower is better)
Translates to: LPLAEAGVMSRW*GLTLVQADRLG
Trigger: GCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCATCGGGACATCACCCCAGCCTCTGCCAGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp GGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTaGCCTCCCCATGCACACTGGCAGTGGATGTGGAAT +
Preference number: 3 (lower is better)
Translates to: GCCSPRVTQSIP*PPHAHWQWMWN
Trigger: ATTCCACATCCACTGCCAGTGTGCATGGGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp CTACTAATCGCGTGCCTGCCTCTGCCTGCCACCCACTaGCAACATAATAGGCACATGCAGCAGCCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: LLIACLPLPATH*QHNRHMQQPPL
Trigger: CAGGGGAGGCTGCTGCATGTGCCTATTATGTTGGCAGTGGGTGGCAGGCAGAGGCAGGCACGCGATTAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp GGGCAGGTGAAGAGCAGGTGCTCAACTGCCCAGCCATaGGGGACACTGGCTAGTGCCACCACTCAAGTCTTA +
Preference number: 3 (lower is better)
Translates to: GQVKSRCSTAQP*GTLASATTQVL
Trigger: TAAGACTTGAGTGGTGGCACTAGCCAGTGTCCCCCATGGCTGGGCAGTTGAGCACCTGCTCTTCACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp GGTCCAAGGAGCAGTAGGGGTGATGGGGCCGCTATCTaGTCAGTTCAGTCCTCAGATTGGCCCAGACAAGGC +
Preference number: 3 (lower is better)
Translates to: GPRSSRGDGAAI*SVQSSDWPRQG
Trigger: GCCTTGTCTGGGCCAATCTGAGGACTGAACTGACCAGATAGCGGCCCCATCACCCCTACTGCTCCTTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR TCA 72 bp TGGTCACCTCCAGGGCTTTCTGGGAAGGGCAGTAGCTaGCCTGGCCACCCACTCAAGCCTGATTGTTCTGAC +
Preference number: 3 (lower is better)
Translates to: WSPPGLSGKGSS*PGHPLKPDCSD
Trigger: GTCAGAACAATCAGGCTTGAGTGGGTGGCCAGGTCAGCTACTGCCCTTCCCAGAAAGCCCTGGAGGTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp TGGTTGCCTTGTCATGGGTGGGAAGGACACTCAGAGTaGCTGAAAAGGGAGGTGCACCAGCCTGGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: WLPCHGWEGHSE*LKREVHQPGVH
Trigger: GTGGACACCAGGCTGGTGCACCTCCCTTTTCAGGCACTCTGAGTGTCCTTCCCACCCATGACAAGGCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp CAGTCCATCCCCTGCCCTCCCCATGCACACTGGCAGTaGATGTGGAATGGAGAACCACTTTCTTCCACCTGC +
Preference number: 3 (lower is better)
Translates to: QSIPCPPHAHWQ*MWNGEPLSSTC
Trigger: GCAGGTGGAAGAAAGTGGTTCTCCATTCCACATCCACTGCCAGTGTGCATGGGGAGGGCAGGGGATGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 72 bp TGCCTTGTCATGGGTGGGAAGGACACTCAGAGTGCCTaGAAAGGGAGGTGCACCAGCCTGGTGTCCACAAAG +
Preference number: 3 (lower is better)
Translates to: CLVMGGKDTQSA*KGRCTSLVSTK
Trigger: CTTTGTGGACACCAGGCTGGTGCACCTCCCTTTTCAGGCACTCTGAGTGTCCTTCCCACCCATGACAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp CTAAGACCGTCTGCTAGTGCTGCTGTCTGCCTTGGCTaGGGAAAATGGAGAGTGTGGGGTCAGACAGAGCTC +
Preference number: 3 (lower is better)
Translates to: LRPSASAAVCLG*GKWRVWGQTEL
Trigger: GAGCTCTGTCTGACCCCACACTCTCCATTTTCCCCAGCCAAGGCAGACAGCAGCACTAGCAGACGGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp GAGATGAGGATTGTAGTTGGCCCACTGCTAAGGCTATaGGTCTGGGGGCAGAGCACAAGGTACCCTGTAGGG +
Preference number: 3 (lower is better)
Translates to: EMRIVVGPLLRL*VWGQSTRYPVG
Trigger: CCCTACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACTACAATCCTCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp ATCCCCTGCCCTCCCCATGCACACTGGCAGTGGATGTaGAATGGAGAACCACTTTCTTCCACCTGCCATCTG +
Preference number: 3 (lower is better)
Translates to: IPCPPHAHWQWM*NGEPLSSTCHL
Trigger: CAGATGGCAGGTGGAAGAAAGTGGTTCTCCATTCCACATCCACTGCCAGTGTGCATGGGGAGGGCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp CTCTGCCTGCCACCCACTGCCAACATAATAGGCACATaGAGCAGCCTCCCCTGGTTCATAACTGTTCACAGC +
Preference number: 3 (lower is better)
Translates to: LCLPPTANIIGT*SSLPWFITVHS
Trigger: GCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTGCCTATTATGTTGGCAGTGGGTGGCAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp TGTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATaGACTAAACAGGCTGGAGCCTCAGAAACCCATGAC +
Preference number: 3 (lower is better)
Translates to: CQRCLGCQDGCP*TKQAGASETHD
Trigger: GTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp CACTTCTGTCAGAGATGTCTTGGCTGCCAGGATGGCTaGCCATGCACTAAACAGGCTGGAGCCTCAGAAACC +
Preference number: 3 (lower is better)
Translates to: HFCQRCLGCQDG*PCTKQAGASET
Trigger: GGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGACAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTGTCTTAAAAAGGCGCTaGGCTGTGACTTCCACCCCA +
Preference number: 3 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTVLKRR*AVTSTP
Trigger: TGGGGTGGAAGTCACAGCCAAGCGCCTTTTTAAGAC...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp CCAGCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTGCACCACAGTTACTCACAAAGCTCTCCTCTaGCTGTGCTGTTGGGCCATG +
Preference number: 3 (lower is better)
Translates to: PAVSAHLVLGLHVCTTVTHKALL*LCCWAM
Trigger: CATGGCCCAACAGCACAGCAAGAGGAGAGCTTTGTG...AGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTGGTCAGAGTGGAAACTaGAGGTCTGTTTTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCGQSGN*RSVFLL
Trigger: CAGCAAGAAAACAGACCTCAAGTTTCCACTCTGACC...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGGGGGAAGTGTCTGGGTaGGGTCACTGTGATGACCTT +
Preference number: 3 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLGEVSG*GHCDDL
Trigger: AAGGTCATCACAGTGACCCAACCCAGACACTTCCCC...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp GAGGCTTGGGGCATGAAGTCAGGGCAGGGGACCAACTaGAACCTTAGCGGACACTACACACATTGTATGTTC +
Preference number: 3 (lower is better)
Translates to: EAWGMKSGQGTN*NLSGHYTHCMF
Trigger: GAACATACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCATGCCCCAAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp CTGCCCTCCCCATGCACACTGGCAGTGGATGTGGAATaGAGAACCACTTTCTTCCACCTGCCATCTGTAGAT +
Preference number: 3 (lower is better)
Translates to: LPSPCTLAVDVE*RTTFFHLPSVD
Trigger: ATCTACAGATGGCAGGTGGAAGAAAGTGGTTCTCCATTCCACATCCACTGCCAGTGTGCATGGGGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 72 bp ACACAGAAGCTACTGAATGGAAGCCATTCCAATAGCTaGGGCTTGGGGCATGAAGTCAGGGCAGGGGACCAA +
Preference number: 3 (lower is better)
Translates to: TQKLLNGSHSNS*GLGHEVRAGDQ
Trigger: TTGGTCCCCTGCCCTGACTTCATGCCCCAAGCCTCAGCTATTGGAATGGCTTCCATTCAGTAGCTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp TGGAGGAGCTCCATCTTTCTTCCAGTGTTCCTTTGCTaGAGGGAATGGATCACAAGTCTGGGAAGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: WRSSIFLPVFLC*REWITSLGRGW
Trigger: CCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGGAAGAAAGATGGAGCTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp CTGTGGAGGAGCTCCATCTTTCTTCCAGTGTTCCTTTaGTGCAGGGAATGGATCACAAGTCTGGGAAGGGGT +
Preference number: 3 (lower is better)
Translates to: LWRSSIFLPVFL*CREWITSLGRG
Trigger: ACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGGAAGAAAGATGGAGCTCCTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp GTGATAGACATCCTGTATGAGGAACTTCTAGGCCCCTaGCATAGGGAAGGAAGGGTCAAGGGAGGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: VIDILYEELLGP*HREGRVKGGQV
Trigger: AACCTGACCTCCCTTGACCCTTCCTTCCCTATGGCAGGGGCCTAGAAGTTCCTCATACAGGATGTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp CAGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTaGGAAGGGGTTGGAGGAAAGCCACACACTGGGTAT +
Preference number: 3 (lower is better)
Translates to: QCSFAAGNGSQV*EGVGGKPHTGY
Trigger: ATACCCAGTGTGTGGCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp TTGCCAAGTATTAGAGATAGGGAGACAGCCAGGACCTaGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACA +
Preference number: 3 (lower is better)
Translates to: LPSIRDRETART*ARGQSSSSYPT
Trigger: TGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCCCTATCTCTAATACTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp AGCAGGCCTGAGTTACAGTATTCTAGAGCACTGGAATaGAGGCAGAGGAAAGAGCACTTGCCACCATCTGGG +
Preference number: 3 (lower is better)
Translates to: SRPELQYSRALE*RQRKEHLPPSG
Trigger: CCCAGATGGTGGCAAGTGCTCTTTCCTCTGCCTCCATTCCAGTGCTCTAGAATACTGTAACTCAGGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTGTCTTAAAAAGGCGCTaGGCTGTGACTTCCACCCCA +
Preference number: 3 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAVLKRR*AVTSTP
Trigger: TGGGGTGGAAGTCACAGCCAAGCGCCTTTTTAAGAC...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CAA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGCACAAAGCTCTCCTCTaGCTGTGCTGTTGGGCCATG +
Preference number: 3 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWHKALL*LCCWAM
Trigger: CATGGCCCAACAGCACAGCAAGAGGAGAGCTTTGTG...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CAA 90 bp GGCTGCCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAACCAGGGGACCTGATTTaGTTCAAGGCCAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: GCPCTKQAGASETHDVFKPGDLI*FKAKCH
Trigger: GTGGCATTTGGCCTTGAACAAAATCAGGTCCCCTGG...TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGCCAGGGGACCTGATTTaGTTCAAGGCCAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWPGDLI*FKAKCH
Trigger: GTGGCATTTGGCCTTGAACAAAATCAGGTCCCCTGG...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR TCA 72 bp GAGCACTTGCCACCATCTGGGATCCAGATGATGGGATaGTCCTACTTCACCAAGGTGTTCTTTGATGGGCCT +
Preference number: 3 (lower is better)
Translates to: EHLPPSGIQMMG*SYFTKVFFDGP
Trigger: AGGCCCATCAAAGAACACCTTGGTGAAGTAGGATCATCCCATCATCTGGATCCCAGATGGTGGCAAGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp CACACCTGTAGTGTTTCTATAGTAGTGTATGTAGTGTaGTGGTTGGCAGGAGGGGTGGGGGCCATGCTAACA +
Preference number: 3 (lower is better)
Translates to: HTCSVSIVVYVV*WLAGGVGAMLT
Trigger: TGTTAGCATGGCCCCCACCCCTCCTGCCAACCAGCACACTACATACACTACTATAGAAACACTACAGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp TCCATCTTTCTTCCAGTGTTCCTTTGCTGCAGGGAATaGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: SIFLPVFLCCRE*ITSLGRGWRKA
Trigger: GGCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGGAAGAAAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp AGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATaGGTGGGAAGGACACTCAGAGTGCCTGAAAAGGGA +
Preference number: 3 (lower is better)
Translates to: SLIVLTSVVALS*VGRTLRVPEKG
Trigger: TCCCTTTTCAGGCACTCTGAGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATCCTCTTGCTGTGCTGTaGGGCCATGCCAGTGACCCA +
Preference number: 3 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNPLAVL*GHASDP
Trigger: TGGGTCACTGGCATGGCCCAACAGCACAGCAAGAGG...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATAGGAGCCGACAAGGGTaGCCACATCAGGAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNRSRQG*PHQEQS
Trigger: ACTCTGCTCCTGATGTGGCAACCCTTGTCGGCTCCT...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 72 bp TATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTaGGGCCCTTGGGAACACTCCGTGTTATTTCTAAAG +
Preference number: 3 (lower is better)
Translates to: YPTEIKAGWQST*GPWEHSVLFLK
Trigger: CTTTAGAAATAACACGGAGTGTTCCCAAGGGCCTCAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp CTCCGTGTTATTTCTAAAGTGCAATGGTGCGACCCATaGCCCTCCTATGCTCAGGGTACCTTAGTGTCAGAT +
Preference number: 3 (lower is better)
Translates to: LRVISKVQWCDP*PSYAQGTLVSD
Trigger: ATCTGACACTAAGGTACCCTGAGCATAGGAGGGGCATGGGTCGCACCATTGCACTTTAGAAATAACACGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp ACCAAACAAAAACACTTCTGTCAGAGATGTCTTGGCTaGCAGGATGGCTGCCCATGCACTAAACAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: TKQKHFCQRCLG*QDGCPCTKQAG
Trigger: TCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGACAGAAGTGTTTTTGTTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp CTCACTTCTTACAACTTTCCAAAGCTTCTGGCCATCTaGAGTTCTCCGACTTCTGTCCTCTCAACACGGCTG +
Preference number: 3 (lower is better)
Translates to: LTSYNFPKLLAI*SSPTSVLSTRL
Trigger: CAGCCGTGTTGAGAGGACAGAAGTCGGAGAACTGCAGATGGCCAGAAGCTTTGGAAAGTTGTAAGAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp GCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTaGACCACAGTTACTCTTTCAGTATTTTCAGGGGTG +
Preference number: 3 (lower is better)
Translates to: AVSAHLVLGLHV*TTVTLSVFSGV
Trigger: CACCCCTGAAAATACTGAAAGAGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp GCTGTCATACATAGACAAAAGGACTTGTTTACCCAGTaGCCACCTGGCAGGTCAGAGTGGAAACTTGAGGTC +
Preference number: 3 (lower is better)
Translates to: AVIHRQKDLFTQ*PPGRSEWKLEV
Trigger: GACCTCAAGTTTCCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTATGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp ACCTGTAGTGTTTCTATAGTAGTGTATGTAGTGTGCTaGTTGGCAGGAGGGGTGGGGGCCATGCTAACAATC +
Preference number: 3 (lower is better)
Translates to: TCSVSIVVYVVC*LAGGVGAMLTI
Trigger: GATTGTTAGCATGGCCCCCACCCCTCCTGCCAACCAGCACACTACATACACTACTATAGAAACACTACAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp AACTTATGTCCTGGCTCCACTACTTGGGTGGCTTCATaGTTGGGTAATAGTGCCTCTAGCCTTAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: NLCPGSTTWVAS*LGNSASSLSLS
Trigger: AGAGAGGCTAAGGCTAGAGGCACTATTACCCAACCATGAAGCCACCCAAGTAGTGGAGCCAGGACATAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp ATCTCAGCAGGCCTGAGTTACAGTATTCTAGAGCACTaGAATGGAGGCAGAGGAAAGAGCACTTGCCACCAT +
Preference number: 3 (lower is better)
Translates to: ISAGLSYSILEH*NGGRGKSTCHH
Trigger: ATGGTGGCAAGTGCTCTTTCCTCTGCCTCCATTCCAGTGCTCTAGAATACTGTAACTCAGGCCTGCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR GCA 72 bp AGGGGGCTGTGGTTGCAGTTACTGCCCAGGTGTCCTTaGTTTGCTGTCATACATAGACAAAAGGACTTGTTT +
Preference number: 3 (lower is better)
Translates to: RGLWLQLLPRCP*FAVIHRQKDLF
Trigger: AAACAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTGCAACCACAGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR-3UTR CAA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATAAGTCTGGGAAGGGGTaGGAGGAAAGCCACACACTG +
Preference number: 3 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNKSGKG*EESHTL
Trigger: CAGTGTGTGGCTTTCCTCCAACCCCTTCCCAGACTT...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR-3UTR CAA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTATTTGTACCTTGGGTTaGGTTTGTCTTGGAGTTTAC +
Preference number: 3 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCICTLG*VCLGVY
Trigger: GTAAACTCCAAGACAAACCAAACCCAAGGTACAAAT...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 72 bp AAGTGTCTGGGTTGGGTCACTGTGATGACCTTTGCTTaGGAACAGGTCCCTTCATTCCATAACCAGATGATC +
Preference number: 3 (lower is better)
Translates to: KCLGWVTVMTFA*EQVPSFHNQMI
Trigger: GATCATCTGGTTATGGAATGAAGGGACCTGTTCTCAAGCAAAGGTCATCACAGTGACCCAACCCAGACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp ACATGGAATGAAATGACCCCATTTCAACACCAAACATaGCAACCTGAGTGCTGTGTGCACACACCTGTAGTG +
Preference number: 3 (lower is better)
Translates to: TWNEMTPFQHQT*QPECCVHTPVV
Trigger: CACTACAGGTGTGTGCACACAGCACTCAGGTTGGCATGTTTGGTGTTGAAATGGGGTCATTTCATTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR TCA 72 bp CAGACATTCCTAACAGCAACTAGAGAGGTCCTGGTTTaGGCCCCCATGATACAGGAAATCATCGTTACACTT +
Preference number: 3 (lower is better)
Translates to: QTFLTATREVLV*APMIQEIIVTL
Trigger: AAGTGTAACGATGATTTCCTGTATCATGGGGGCTCAAACCAGGACCTCTCTAGTTGCTGTTAGGAATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp AATGTGAACAATAACTTATGTCCTGGCTCCACTACTTaGGTGGCTTCATGGTTGGGTAATAGTGCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: NVNNNLCPGSTT*VASWLGNSASS
Trigger: GCTAGAGGCACTATTACCCAACCATGAAGCCACCCAAGTAGTGGAGCCAGGACATAAGTTATTGTTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CCA 72 bp GGGTGGTGGAAATGTTTTTGCTGTGGCTTCTTTAGGTaGCTAGCCTTCTCACTTCTTACAACTTTCCAAAGC +
Preference number: 3 (lower is better)
Translates to: GWWKCFCCGFFR*LAFSLLTTFQS
Trigger: GCTTTGGAAAGTTGTAAGAAGTGAGAAGGCTAGCCACCTAAAGAAGCCACAGCAAAAACATTTCCACCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR TCA 72 bp CCAGACACCCTTTCTGGTTGCATTCATAACATGGAATaGAATGACCCCATTTCAACACCAAACATGCCAACC +
Preference number: 3 (lower is better)
Translates to: PDTLSGCIHNME*NDPISTPNMPT
Trigger: GGTTGGCATGTTTGGTGTTGAAATGGGGTCATTTCATTCCATGTTATGAATGCAACCAGAAAGGGTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR GCA 72 bp CATAACCAGATGATCATTTCTGGAAGATGCCACATCTaGTCATATCCCAGACACCCTTTCTGGTTGCATTCA +
Preference number: 3 (lower is better)
Translates to: HNQMIISGRCHI*SYPRHPFWLHS
Trigger: TGAATGCAACCAGAAAGGGTGTCTGGGATATGAGCAGATGTGGCATCTTCCAGAAATGATCATCTGGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR TCA 72 bp TTGCTTGAGAACAGGTCCCTTCATTCCATAACCAGATaGTCATTTCTGGAAGATGCCACATCTGCTCATATC +
Preference number: 3 (lower is better)
Translates to: LLENRSLHSITR*SFLEDATSAHI
Trigger: GATATGAGCAGATGTGGCATCTTCCAGAAATGATCATCTGGTTATGGAATGAAGGGACCTGTTCTCAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp ATATCCCAGACACCCTTTCTGGTTGCATTCATAACATaGAATGAAATGACCCCATTTCAACACCAAACATGC +
Preference number: 3 (lower is better)
Translates to: ISQTPFLVAFIT*NEMTPFQHQTC
Trigger: GCATGTTTGGTGTTGAAATGGGGTCATTTCATTCCATGTTATGAATGCAACCAGAAAGGGTGTCTGGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CCA 72 bp AAAACATTTATGTGTAACACATTTGTACCTTGGGTTTaGTTTGTCTTGGAGTTTACTTTGCAGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: KTFMCNTFVPWV*FVLEFTLQGAA
Trigger: GGCTGCCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATGTGTTACACATAAATGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCCCAGGTTGCCTTTGTaGTGGATGGCCGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRPRLPL*WMAGVW
Trigger: CCAAACCCCGGCCATCCATCACAAAGGCAACCTGGG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCAGCTCTGGGGGAGTTaGACACTTCCTCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRQLWGS*TLPQWC
Trigger: GCACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTGGCTGCATTGGGGACTaGGGGGTTGGAGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSGCIGD*GVGGGD
Trigger: GTCACCTCCTCCAACCCCTCAGTCCCCAATGCAGCC...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGGATGTAGGGCTGCAGTaGCGTGCTTCGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRDVGLQ*RASMRL
Trigger: CAACCTCATCGAAGCACGGCACTGCAGCCCTACATC...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTACCTGCATCTTTCGGCTaGCACTCGGCCAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVPASFG*HSASSH
Trigger: ATGAGAACTGGCCGAGTGTCAGCCGAAAGATGCAGG...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTACCTCATTCCTTGGCTTaGCCACAGCATCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVPHSLA*PQHPWA
Trigger: AGCCCATGGATGCTGTGGTCAAGCCAAGGAATGAGG...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGGGCTGCAGTGCCGTaGTTCGATGAGGTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRRAAVP*FDEVEK
Trigger: CTTTTCAACCTCATCGAAGCACGGCACTGCAGCCCT...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCGAGGGCATCACGCTCTaGTTGGAGCTTCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPEGITL*LELLQC
Trigger: GCATTGCAGAAGCTCCAAGCAGAGCGTGATGCCCTC...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCAGCGCCATCAGTGAGTaGGACAAGCTGGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPSAISE*DKLDGD
Trigger: ATCCCCATCCAGCTTGTCGCACTCACTGATGGCGCT...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCCTGTAAGTTTGAGTTaGAGAGGGGTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRPVSLS*RGVSQL
Trigger: GAGCTGGCTCACCCCTCTGCAACTCAAACTTACAGG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGACCGCCCCAGGCGAGTaGATCTTGTCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRTAPGE*ILSCTA
Trigger: TGCTGTACAGGACAAGATGCACTCGCCTGGGGCGGT...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGGTTACTCTCCCAGGTTaGCTTTGTGATGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRVTLPG*LCDGWP
Trigger: CGGCCATCCATCACAAAGGCAACCTGGGAGAGTAAC...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAAGGCAGAGACAGCCATaGGGTTGGAAGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVRQRQP*GWKVGV
Trigger: GACACCAACCTTCCAACCCCATGGCTGTCTCTGCCT...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCACAATCCCACCACACTaGTGTTGTAGGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPTIPPH*CCRWGC
Trigger: GCATCCCCACCTACAACATCAGTGTGGTGGGATTGT...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGGTTTCCCAGGAGTTATaGAAGGAGAGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRVSQEL*KERSPG
Trigger: ACCTGGAGACCTCTCCTTTCATAACTCCTGGGAAAC...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCAGCTCTGGGGGAGTTaGACACTTCCTCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSQLWGS*TLPQWC
Trigger: GCACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTTGGGGAGGTGATGGCTaGCTGGTAGCAGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSWGGDG*LVAGVE
Trigger: CTCTACACCTGCTACCAGTCAGCCATCACCTCCCCA...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGGTTGCACTAAGGTGCTaGAAGCCAAGTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRVALRC*KPSPHS
Trigger: TGAATGTGGACTTGGCTTTCAGCACCTTAGTGCAAC...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAACCGCCCCAGGCGAGTaGATCTTGTCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRTAPGE*ILSCTA
Trigger: TGCTGTACAGGACAAGATGCACTCGCCTGGGGCGGT...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCAGTTTATGCTGGGGCTaGCTACAAGGGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPSLCWG*LQGMLV
Trigger: CACAAGCATCCCTTGTAGCCAGCCCCAGCATAAACT...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAAGCTCAAGTTTATGCTaGGGCTGGCTACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVSSSLC*GWLQGM
Trigger: CATCCCTTGTAGCCAGCCCCAGCATAAACTTGAGCT...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTTGCCTTTGTGATGGATaGCCGGGGTTTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSCLCDG*PGFGLW
Trigger: CCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCA...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGTGGGCCAGAAGCAGATaGACAGGTTCTCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRWARSR*TGSHWS
Trigger: TGACCAGTGAGAACCTGTCCATCTGCTTCTGGCCCA...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAAAGAAGGGGCACTGCTaGATGAAGAGCTCGATGATG +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVKKGHC*MKSSMM
Trigger: CATCATCGAGCTCTTCATCCAGCAGTGCCCCTTCTT...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCAAAACAATGTACCCATaGACCAACCGGCTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPKTMYP*TNRLFR
Trigger: CCGAAAGAGCCGGTTGGTTCATGGGTACATTGTTTT...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGTACAAGGGATGCTTGTaGATCTCCCGTCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRYKGCL*ISRQSL
Trigger: AAGAGATTGACGGGAGATTCACAAGCATCCCTTGTA...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCAAACTTTCCATTTCTaGCTTGTTTCCACTGACCCG +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRQTFHF*LVSTDP
Trigger: CGGGTCAGTGGAAACAAGTCAGAAATGGAAAGTTTG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATGTTGTAGGTGGGGATaGGGACATCTTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVCCRWG*GHLAFL
Trigger: CAAGAAAGCAAGATGTCCGCATCCCCACCTACAACA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTAGCCAATGGCAGAGCTaGCAGGTACAGCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCSQWQS*QVQLSP
Trigger: CGGAGAAAGCTGTACCTGGCAGCTCTGCCATTGGCT...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATGTCAATGTGGCTGGTaGCATCCCATGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVCQCGW*HPMVFL
Trigger: AAGAAACACCATGGGATGCCACCAGCCACATTGACA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCTGTTGTCAATGTGGCTaGTGGCATCCCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPCCQCG*WHPMVF
Trigger: AAACACCATGGGATGCCACCAGCCACATTGACAACA...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTACAAGCTGGACAGCTTaGGCATGTCTCCTTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCTSWTA*ACLLRR
Trigger: CCGACGAAGGAGACATGCCCAAGCTGTCCAGCTTGT...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAACAAGCTGGACAGCTTaGGCATGTCTCCTTCGTCGG +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRTSWTA*ACLLRR
Trigger: CCGACGAAGGAGACATGCCCAAGCTGTCCAGCTTGT...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTATGCACAGGAGGCTTTaGTTTGACTGGGGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSMHRRL*FDWGRY
Trigger: GTACCTCCCCCAGTCAAACCAAAGCCTCCTGTGCAT...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAGGATGTGCTTCAGAATaGGGGCATCACGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRGCASE*GHHALL
Trigger: AAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCC...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTCAGGAGGCTTTGGTTTaGCTGGGGGAGGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCQEALV*LGEVLC
Trigger: ACAAAGTACCTCCCCCAGTCAAACCAAAGCCTCCTG...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCCAAACTTTCCATTTCTaGCTTGTTTCCACTGACCCG +
Preference number: 4 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPQTFHF*LVSTDP
Trigger: CGGGTCAGTGGAAACAAGTCAGAAATGGAAAGTTTG...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATCTCCCTCTGTTAGCTaGTCTCGACTTAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVSPSVS*SRLKSL
Trigger: CAATGACTTAAGTCGAGAGCAGCTAACAGAGGGAGA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGAGCATCCATGGGCTCTaGGTAGTCAGAAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRSIHGL*VVRRIK
Trigger: TTTGATCCTTCTGACTACGCAGAGCCCATGGATGCT...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTACTCTTCATGGCCCCTaGCACAGTGTTCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSTLHGP*HSVHSE
Trigger: TTCACTGTGAACACTGTGGCAGGGGCCATGAAGAGT...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATTGCTGCTCCCACAGTaGGAAGATTTACAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVLLLPQ*EDLQVW
Trigger: CCAAACTTGTAAATCTTCCCACTGTGGGAGCAGCAA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTATGCACAGGAGGCTTTaGTTTGACTGGGGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCMHRRL*FDWGRY
Trigger: GTACCTCCCCCAGTCAAACCAAAGCCTCCTGTGCAT...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGCCCTGGGTGCTGTCGTaGGGCACCGAGTATATGTTT +
Preference number: 4 (lower is better)
Translates to: VRDVLAARMAAHALNRLEPWVLS*GTEYMF
Trigger: AAACATATACTCGGTGCCCCACGACAGCACCCAGGG...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCCTCTTTCTTTCGGATaGGTCCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSPLSFG*VPAHHH
Trigger: GTGATGATGAGCTGGGACCCATCCGAAAGAAAGAGG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCTCATCTGTTTCATATaGAATGACAGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRLICFI*NDSIVP
Trigger: GGGGACAATGCTGTCATTCCATATGAAACAGATGAG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATGGATGGCCGGGGTTTaGGCTTTGGTTTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRWMAGV*ALVSWC
Trigger: ACACCAAGAAACCAAAGCCCAAACCCCGGCCATCCA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGCTGAGAGGACAGCAATaGCTGCATTGGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VRDVLAARMAAHALNRLELRGQQ*LHWGLR
Trigger: CCTCAGTCCCCAATGCAGCCATTGCTGTCCTCTCAG...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAGAAAGTGGTCATTATTaGCCACCCGCCCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRESGHY*PPAHQS
Trigger: ACTTTGGTGGGCGGGTGGTCAATAATGACCACTTTC...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTAAAACAATGTACCCATaGACCAACCGGCTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSKTMYP*TNRLFR
Trigger: CCGAAAGAGCCGGTTGGTTCATGGGTACATTGTTTT...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGACTTTCTCCTTCTCAGTaGCTGACAATCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRLSPSQ*LTIPPH
Trigger: GTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAG...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCCTGGAGGTTCTTTTTaGTTAAGGCAAAAGTATGTG +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRPGGSF*LRQKYV
Trigger: CACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGTCGCCCAGAACATCCTaGATGACACCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VRDVLAARMAAHALNRLESPRTS*MTPIFS
Trigger: GGAGAAGATGGGTGTCATCCAGGATGTTCTGGGCGA...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTGCATCACGCTCTGCTTaGAGCTTCTGCAATGCTTTA +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSASRSA*SFCNAL
Trigger: TAAAGCATTGCAGAAGCTCCAAGCAGAGCGTGATGC...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTATGGGGTTGGAAGGTTaGTGTCTGGAAAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSMGLEG*CLERVH
Trigger: GTGAACTCTTTCCAGACACCAACCTTCCAACCCCAT...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp CGCTTGGCTGTGACTTCCACCCCAGGGGACCTGATTTaGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: RLAVTSTPGDLI*FKAKCHPVKKT
Trigger: CGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGGTCCCCTGGGGTGGAAGTCACAGCCAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp AAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTaGCTGTGCTGTTGGGCCATGCCAGTGACCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KPHTGYRHKALL*LCCWAMPVTQC
Trigger: ACACTGGGTCACTGGCATGGCCCAACAGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CATTTGTACCTTGGGTTTGGTTTGTCTTGGAGTTTACTTTGCAGGGGGCAGCCTTGGCTGCGGCTCTCTTaGTGTAGGGCTGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: HLYLGFGLSWSLLCRGQPWLRLS*CRAAVP
Trigger: CGGCACTGCAGCCCTACATCAAGAGAGCCGCAGCCA...AGGCTGCCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCAGTGCAAAAATACATaGGTTTTTCAGCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRQCKNT*VFQLKQ
Trigger: TTGCTTCAGCTGAAAAACTCATGTATTTTTGCACTG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTGCTGTAGCTATCTGCTaGCTCTGCTGCTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTAVAIC*LCCLRA
Trigger: AGCTCTCAAGCAGCAGAGTCAGCAGATAGCTACAGC...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp CCAGCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTGCACCACAGTTACTCCTCATTCCTTGGCTTaGCCACAGCATCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PAVSAHLVLGLHVCTTVTPHSLA*PQHPWA
Trigger: AGCCCATGGATGCTGTGGTCAAGCCAAGGAATGAGG...AGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAATGTTCGGCTTGGAGCTaGGAGGACAGCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKCSAWS*EDSNGC
Trigger: GCAGCCATTGCTGTCCTCTCAGCTCCAAGCCGAACA...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGGTCTGCTCCACAATGTaGATCTTACATTCCACACAA +
Preference number: 4 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRVCSTM*ILHSTQ
Trigger: TTGTGTGGAATGTAAGATGCACATTGTGGAGCAGAC...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCGATGTAGGGCTGCAGTaGCGTGCTTCGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESDVGLQ*RASMRL
Trigger: CAACCTCATCGAAGCACGGCACTGCAGCCCTACATC...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGAGCAAGCTTGGTGGCTaGGGCTCTCTTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLSKLGG*GSLDVG
Trigger: CCCTACATCAAGAGAGCCGCAGCCACCAAGCTTGCT...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTTTCACCTTGTTGTTGTaGCTGACTTTGTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSFTLLL*LTLFRW
Trigger: CCACCTGAACAAAGTCAGCCACAACAACAAGGTGAA...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGTGGCTGCGGCTCTCTTaGTGTAGGGCTGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLWLRLS*CRAAVP
Trigger: CGGCACTGCAGCCCTACATCAAGAGAGCCGCAGCCA...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTCATGAGTTTTTCAGCTaGAGCAAGCTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTHEFFS*SKLGGC
Trigger: GCAGCCACCAAGCTTGCTTCAGCTGAAAAACTCATG...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTTCATGCTTGAGGCGGTaGATGTGCTGCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LEESHTLGIGTKLSSCCASCLRR*MCCRKS
Trigger: GCTCTTCCTGCAGCACATTCACCGCCTCAAGCATGA...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAATACTCAGGGGAGGCCTaGATCTTTCGGCTGACACTC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKYSGEA*IFRLTL
Trigger: GAGTGTCAGCCGAAAGATGCAGGCCTCCCCTGAGTA...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATACTCAGGGGAGGCCTaGATCTTTCGGCTGACACTC +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEYSGEA*IFRLTL
Trigger: GAGTGTCAGCCGAAAGATGCAGGCCTCCCCTGAGTA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAAGCCAATGGCAGAGCTaGCAGGTACAGCTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKSQWQS*QVQLSP
Trigger: CGGAGAAAGCTGTACCTGGCAGCTCTGCCATTGGCT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATCTCCCTCTGTTAGCTaGTCTCGACTTAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRSPSVS*SRLKSL
Trigger: CAATGACTTAAGTCGAGAGCAGCTAACAGAGGGAGA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGACACTTCCTCAGTGGTaGTGCAGGCCTCAGCTACAT +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLTLPQW*CRPQLH
Trigger: ATGTAGCTGAGGCCTGCAGCACCACTGAGGAAGTGT...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTTTTATAACCTTGGGATaGCTGGTCCTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSFITLG*LVLLFL
Trigger: AAGAAAGAGGAGGACCAGGCATCCCAAGGTTATAAA...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGGCTGGTGGCATCCCATaGTGTTTCTTCAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: VRDVLAARMAAHALNRLEAGGIP*CFFKYN
Trigger: GTTGTACTTGAAGAAACACCATGGGATGCCACCAGC...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCTCGCCCAGAACATCCTaGATGACACCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESSPRTS*MTPIFS
Trigger: GGAGAAGATGGGTGTCATCCAGGATGTTCTGGGCGA...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTGAAGATTTACAAGTTTaGGATTGCAGGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSEDLQV*DCRTGE
Trigger: CTCTCCTGTCCTGCAATCCCAAACTTGTAAATCTTC...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTGTGAGTGCGACAAGCTaGATGGGGATAATATCCTGC +
Preference number: 4 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTVSATS*MGIISC
Trigger: GCAGGATATTATCCCCATCCAGCTTGTCGCACTCAC...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATTCACCTTGTTGTTGTaGCTGACTTTGTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRFTLLL*LTLFRW
Trigger: CCACCTGAACAAAGTCAGCCACAACAACAAGGTGAA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACTGAGAGGACAGCAATaGCTGCATTGGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKLRGQQ*LHWGLR
Trigger: CCTCAGTCCCCAATGCAGCCATTGCTGTCCTCTCAG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp TTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTaGGAGGAAAGCCACACACTGGGTATAGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LLQGMDHKSGKG*EESHTLGIGTK
Trigger: CTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp TCTGTGGAGGAGCTCCATCTTTCTTCCAGTGTTCCTTaGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SVEELHLSSSVP*LQGMDHKSGKG
Trigger: CCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACTGGAAGAAAGATGGAGCTCCTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAACAATCCCACCACACTaGTGTTGTAGGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKTIPPH*CCRWGC
Trigger: GCATCCCCACCTACAACATCAGTGTGGTGGGATTGT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTCTCCTTCTCAGTGCCTaGCAATCCCACCACACTGAT +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCLLLSA*QSHHTD
Trigger: ATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAG...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACTCCTTCTCAGTGCCTaGCAATCCCACCACACTGAT +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKLLLSA*QSHHTD
Trigger: ATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCAATATGCTCATGCTTaGGGCGGTGAATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESQYAHA*GGECAA
Trigger: TGCAGCACATTCACCGCCTCAAGCATGAGCATATTG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGGTTTCCCAGGAGTTATaGAAGGAGAGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLVSQEL*KERSPG
Trigger: ACCTGGAGACCTCTCCTTTCATAACTCCTGGGAAAC...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACCAGAACATCCTGGATaGCACCCATCTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEPEHPG*HPSSPC
Trigger: GCAAGGAGAAGATGGGTGTCATCCAGGATGTTCTGG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACCAGAACATCCTGGATaGCACCCATCTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKPEHPG*HPSSPC
Trigger: GCAAGGAGAAGATGGGTGTCATCCAGGATGTTCTGG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTCCGAAACAGGTGGTATaGTGGAGGCTCCACATCTTC +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCPKQVV*WRLHIF
Trigger: GAAGATGTGGAGCCTCCATCATACCACCTGTTTCGG...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCCCCAGGTTGCCTTTGTaGTGGATGGCCGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSPRLPL*WMAGVW
Trigger: CCAAACCCCGGCCATCCATCACAAAGGCAACCTGGG...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACTGACTTGTTTCCACTaGCCCGGTAGATGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKLTCFH*PGRCLQ
Trigger: CTGAAGGCATCTACCGGGTCAGTGGAAACAAGTCAG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATGGCTGCATTGGGGACTaGGGGGTTGGAGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNGCIGD*GVGGGD
Trigger: GTCACCTCCTCCAACCCCTCAGTCCCCAATGCAGCC...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTTCTGCTTGGAGCTTCTaGAATGCTTTAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCSAWSF*NALNLC
Trigger: GCAGAGATTTAAAGCATTGCAGAAGCTCCAAGCAGA...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATCTGCTTGGAGCTTCTaGAATGCTTTAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRSAWSF*NALNLC
Trigger: GCAGAGATTTAAAGCATTGCAGAAGCTCCAAGCAGA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCAGCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTGCACCACAGTTACTAAGAGCTCAAGTTTATaGTGGGGCTGGCTACAAGGG +
Preference number: 4 (lower is better)
Translates to: PAVSAHLVLGLHVCTTVTKSSSL*WGWLQG
Trigger: CCCTTGTAGCCAGCCCCAGCATAAACTTGAGCTCTT...AGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCACTTCCTTCAGAGCATaGAGCTTCTGTTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESTSFRA*SFCSLS
Trigger: CGACAGGGAACAGAAGCTGCATGCTCTGAAGGAAGT...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGAGTCCACATTCACATTaGACCTTGCAGAGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: VRDVLAARMAAHALNRLESPHSH*TLQRSL
Trigger: TAGAGACCTCTGCAAGGTCCAATGTGAATGTGGACT...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAGAGCTCGAATTTCATTaGCCAACTCTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEELEFH*PTLGQG
Trigger: GCCTTGCCCGAGAGTTGGCCAATGAAATTCGAGCTC...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTTGCCTTTGTGATGGATaGCCGGGGTTTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTCLCDG*PGFGLW
Trigger: CCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCA...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTCTCCAGGTTTTCTTTaGAAGCCCTTCGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLSPGFL*KPFASQ
Trigger: CTGAGATGCGAAGGGCTTTCAAAGAAAACCTGGAGA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGGGATGTGCTTCAGAATaGGGGCATCACGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWGCASE*GHHALL
Trigger: AAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCC...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCAAAATTGCTCATTATaGAAGATAGCCCGTCATTTC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSQNCSL*KIARHF
Trigger: GAAATGACGGGCTATCTTTCATAATGAGCAATTTTG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGTTCGGCTTGGAGCTaGGAGGACAGCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSCSAWS*EDSNGC
Trigger: GCAGCCATTGCTGTCCTCTCAGCTCCAAGCCGAACA...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACTTTCTCCTTCTCAGTaGCTGACAATCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKLSPSQ*LTIPPH
Trigger: GTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCAGCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTGCACCACAGTTACTCCCGTCAATCTCTTGTaGAATTTCCTCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PAVSAHLVLGLHVCTTVTPVNLL*NFLSLC
Trigger: ACAGAGGGAGAGGAAATTGCACAAGAGATTGACGGG...AGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GGCTGCCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAAACACTTCCTCAGTGGTaGTGCAGGCCTCAGCTACAT +
Preference number: 4 (lower is better)
Translates to: GCPCTKQAGASETHDVFKTLPQW*CRPQLH
Trigger: ATGTAGCTGAGGCCTGCAGCACCACTGAGGAAGTGT...TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTTTTGTGATATCAAAATaGACAGGAGGCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSFVISK*TGGFGL
Trigger: CAAACCAAAGCCTCCTGTGCATTTTGATATCACAAA...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTGTTACTCTCCCAGGTTaGCTTTGTGATGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTVTLPG*LCDGWP
Trigger: CGGCCATCCATCACAAAGGCAACCTGGGAGAGTAAC...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTACTTCCTTCAGAGCATaGAGCTTCTGTTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: LEESHTLGIGTKLSSCCATSFRA*SFCSLS
Trigger: CGACAGGGAACAGAAGCTGCATGCTCTGAAGGAAGT...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCTGCTCCAGTCCCAGCTaGTCAGTGCAAAAATACATG +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESCSSPS*SVQKYM
Trigger: CATGTATTTTTGCACTGACCAGCTGGGACTGGAGCA...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CATTTGTACCTTGGGTTTGGTTTGTCTTGGAGTTTACTTTGCAGGGGGCAGCCTAGGCAGAGACAGCCATaGGGTTGGAAGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HLYLGFGLSWSLLCRGQPRQRQP*GWKVGV
Trigger: GACACCAACCTTCCAACCCCATGGCTGTCTCTGCCT...AGGCTGCCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTATGCTAAATGAGGAATaGTATGAAAGAACAGACAGC +
Preference number: 4 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSMLNEE*YERTDS
Trigger: GCTGTCTGTTCTTTCATACCATTCCTCATTTAGCAT...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTAGTTTATGCTGGGGCTaGCTACAAGGGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LEESHTLGIGTKLSSCCASLCWG*LQGMLV
Trigger: CACAAGCATCCCTTGTAGCCAGCCCCAGCATAAACT...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAAGCTCAAGTTTATGCTaGGGCTGGCTACAAGGGATG +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKSSSLC*GWLQGM
Trigger: CATCCCTTGTAGCCAGCCCCAGCATAAACTTGAGCT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCCCTGGGTGCTGTCGTaGGGCACCGAGTATATGTTT +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASPWVLS*GTEYMF
Trigger: AAACATATACTCGGTGCCCCACGACAGCACCCAGGG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACCACTGCCATTGGACTaGGCTTTGTTGATGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEPLPLD*ALLMFR
Trigger: TCGGAACATCAACAAAGCCCAGTCCAATGGCAGTGG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGTGGGCCAGAAGCAGATaGACAGGTTCTCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWWARSR*TGSHWS
Trigger: TGACCAGTGAGAACCTGTCCATCTGCTTCTGGCCCA...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAAAGAAGGGGCACTGCTaGATGAAGAGCTCGATGATG +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKKKGHC*MKSSMM
Trigger: CATCATCGAGCTCTTCATCCAGCAGTGCCCCTTCTT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp CACTCAAGCCTGATTGTTCTGACTTCTGTGGTTGCCTaGTCATGGGTGGGAAGGACACTCAGAGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: HSSLIVLTSVVA*SWVGRTLRVPE
Trigger: TTCAGGCACTCTGAGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAATAGAGAACTTGGAATaGTCTTTGGACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKIENLE*SLDREG
Trigger: GCCCTCCCTGTCCAAAGATCATTCCAAGTTCTCTAT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTTGGGGAGGTGATGGCTaGCTGGTAGCAGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPWGGDG*LVAGVE
Trigger: CTCTACACCTGCTACCAGTCAGCCATCACCTCCCCA...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCAGGGCTGCAGTGCCGTaGTTCGATGAGGTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASRAAVP*FDEVEK
Trigger: CTTTTCAACCTCATCGAAGCACGGCACTGCAGCCCT...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCAGCAAGCTTGGTGGCTaGGGCTCTCTTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSSKLGG*GSLDVG
Trigger: CCCTACATCAAGAGAGCCGCAGCCACCAAGCTTGCT...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTTTCTGCTCAAAGTCTTaGTCCAGTCCCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTFCSKS*SSPSWS
Trigger: TGACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAA...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTCTCTTATCAATGAGTTaGACTAAGGTGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTLLSMS*TKVLKA
Trigger: GGCTTTCAGCACCTTAGTGCAACTCATTGATAAGAG...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACCCGTCAATCTCTTGTaGAATTTCCTCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEPVNLL*NFLSLC
Trigger: ACAGAGGGAGAGGAAATTGCACAAGAGATTGACGGG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGAAGAGCTCAAGTTTATaGTGGGGCTGGCTACAAGGG +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWKSSSL*WGWLQG
Trigger: CCCTTGTAGCCAGCCCCAGCATAAACTTGAGCTCTT...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCCTGTAAGTTTGAGTTaGAGAGGGGTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASPVSLS*RGVSQL
Trigger: GAGCTGGCTCACCCCTCTGCAACTCAAACTTACAGG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTCAGAACCATTACCACTaGCATTGGACTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAQNHYH*HWTGLC
Trigger: ACAAAGCCCAGTCCAATGGCAGTGGTAATGGTTCTG...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAAGTGAAGTCTTTCTCTaGCAGGTCCAGATTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKSEVFL*QVQIVV
Trigger: GACCACAATCTGGACCTGGCAGAGAAAGACTTCACT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCGCAGGAAGAGCTTCTTaGCCTTCTGTGTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASAGRAS*PSVSLP
Trigger: TGGAAGGGACACAGAAGGCCAAGAAGCTCTTCCTGC...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATTAATACAGCTCAGGTaGTCCACTTCATCTAGATTA +
Preference number: 4 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRLIQLR*STSSRL
Trigger: TAATCTAGATGAAGTGGACCACCTGAGCTGTATTAA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCTGGTGGCATCCCATaGTGTTTCTTCAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKAGGIP*CFFKYN
Trigger: GTTGTACTTGAAGAAACACCATGGGATGCCACCAGC...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCGAGCTCGAATTTCATTaGCCAACTCTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASELEFH*PTLGQG
Trigger: GCCTTGCCCGAGAGTTGGCCAATGAAATTCGAGCTC...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACACACTGAAGTTTGCTaGCAATCTGCTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKHTEVC*QSADLA
Trigger: AGCAAGGTCAGCAGATTGCCAGCAAACTTCAGTGTG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAGGTTTAAGTTGCGCTTaGAGTCCAGGAGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEGLSCA*SPGVLS
Trigger: TGAAAGGACTCCTGGACTCCAAGCGCAACTTAAACC...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGAGGCTTTGGTTTGACTaGGGGAGGTACTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLRLWFD*GRYFVV
Trigger: AACAACAAAGTACCTCCCCCAGTCAAACCAAAGCCT...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTCCTCTTTCTTTCGGATaGGTCCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTPLSFG*VPAHHH
Trigger: GTGATGATGAGCTGGGACCCATCCGAAAGAAAGAGG...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CAA 72 bp TGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTaGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CPCFAVIHRQKD*FTQWPPGRSEW
Trigger: CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp TTATGTCCTGGCTCCACTACTTGGGTGGCTTCATGGTaGGGTAATAGTGCCTCTAGCCTTAGCCTCTCTACA +
Preference number: 4 (lower is better)
Translates to: LCPGSTTWVASW*GNSASSLSLST
Trigger: TGTAGAGAGGCTAAGGCTAGAGGCACTATTACCCAACCATGAAGCCACCCAAGTAGTGGAGCCAGGACATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCATGAGTTTTTCAGCTaGAGCAAGCTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASHEFFS*SKLGGC
Trigger: GCAGCCACCAAGCTTGCTTCAGCTGAAAAACTCATG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCGCTGTAGCTATCTGCTaGCTCTGCTGCTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSAVAIC*LCCLRA
Trigger: AGCTCTCAAGCAGCAGAGTCAGCAGATAGCTACAGC...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATCCTGCATCTTTCGGCTaGCACTCGGCCAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNPASFG*HSASSH
Trigger: ATGAGAACTGGCCGAGTGTCAGCCGAAAGATGCAGG...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGCCGAAACAGGTGGTATaGTGGAGGCTCCACATCTTC +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLPKQVV*WRLHIF
Trigger: GAAGATGTGGAGCCTCCATCATACCACCTGTTTCGG...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCCAGGAGGCTTTGGTTTaGCTGGGGGAGGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSQEALV*LGEVLC
Trigger: ACAAAGTACCTCCCCCAGTCAAACCAAAGCCTCCTG...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGCTGACTTGTTTCCACTaGCCCGGTAGATGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLLTCFH*PGRCLQ
Trigger: CTGAAGGCATCTACCGGGTCAGTGGAAACAAGTCAG...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCTGGGTCTCATACAACTaGTCAGCAGGGACAGTATCC +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASWVSYN*SAGTVS
Trigger: GGATACTGTCCCTGCTGAGCAGTTGTATGAGACCCA...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCAATGCTTTAAATCTCTaGTCTTCGCCCAGAACATCC +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESNALNL*SSPRTS
Trigger: GGATGTTCTGGGCGAAGAGCAGAGATTTAAAGCATT...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGAGGGCATCACGCTCTaGTTGGAGCTTCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPEGITL*LELLQC
Trigger: GCATTGCAGAAGCTCCAAGCAGAGCGTGATGCCCTC...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGTGCTGTATCAAGCTGTaGAGAGTCTCTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWCCIKL*RVSPLV
Trigger: CACAAGTGGAGAGACTCTGCACAGCTTGATACAGCA...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGACACACTGAAGTTTaGTGGCAATCTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEERHTEV*WQSADL
Trigger: AAGGTCAGCAGATTGCCAGCAAACTTCAGTGTGTCT...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTGTAAAACAGAGTTGCTaGTCCCACAGTGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCVKQSC*SHSGKI
Trigger: AATCTTCCCACTGTGGGAGCAGCAACTCTGTTTTAC...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGTAAAACAGAGTTGCTaGTCCCACAGTGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKVKQSC*SHSGKI
Trigger: AATCTTCCCACTGTGGGAGCAGCAACTCTGTTTTAC...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTAGCGCCATCAGTGAGTaGGACAAGCTGGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPSAISE*DKLDGD
Trigger: ATCCCCATCCAGCTTGTCGCACTCACTGATGGCGCT...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCTTTATAACCTTGGGATaGCTGGTCCTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESFITLG*LVLLFL
Trigger: AAGAAAGAGGAGGACCAGGCATCCCAAGGTTATAAA...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGAGTGAAGTCTTTCTCTaGCAGGTCCAGATTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWSEVFL*QVQIVV
Trigger: GACCACAATCTGGACCTGGCAGAGAAAGACTTCACT...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CATTTGTACCTTGGGTTTGGTTTGTCTTGGAGTTTACTTTGCAGGGGGCAGCCTACTCTTCATGGCCCCTaGCACAGTGTTCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: HLYLGFGLSWSLLCRGQPTLHGP*HSVHSE
Trigger: TTCACTGTGAACACTGTGGCAGGGGCCATGAAGAGT...AGGCTGCCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp CATTTGTACCTTGGGTTTGGTTTGTCTTGGAGTTTACTTTGCAGGGGGCAGCCTCCCCAGTACAGAAAGTaGTCATTATTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: HLYLGFGLSWSLLCRGQPPQYRK*SLLTTR
Trigger: GCGGGTGGTCAATAATGACCACTTTCTGTACTGGGG...AGGCTGCCCCCTGCAAAGTAAACTCCAAGACAAACCAAACCCAAGGTACAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGTGCTCCAGTCCCAGCTaGTCAGTGCAAAAATACATG +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWCSSPS*SVQKYM
Trigger: CATGTATTTTTGCACTGACCAGCTGGGACTGGAGCA...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGGCAGGAAGAGCTTCTTaGCCTTCTGTGTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLAGRAS*PSVSLP
Trigger: TGGAAGGGACACAGAAGGCCAAGAAGCTCTTCCTGC...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGTGTCAATGTGGCTGGTaGCATCCCATGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWCQCGW*HPMVFL
Trigger: AAGAAACACCATGGGATGCCACCAGCCACATTGACA...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTTCCAAAAGCAACTCTTaGAACTCTTCCTTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCSKSNS*NSSFAR
Trigger: CCGAGCAAAGGAAGAGTTCCAAGAGTTGCTTTTGGA...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTGGGTGGTACACAAAATaGATGTGCTTCAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAGWYTK*MCFRMR
Trigger: CCTCATTCTGAAGCACATCCATTTTGTGTACCACCC...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATTGCTGCTCCCACAGTaGGAAGATTTACAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEELLLPQ*EDLQVW
Trigger: CCAAACTTGTAAATCTTCCCACTGTGGGAGCAGCAA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGGCTTTGGTTTGACTaGGGGAGGTACTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEERLWFD*GRYFVV
Trigger: AACAACAAAGTACCTCCCCCAGTCAAACCAAAGCCT...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp GGCTGTGGTTGCAGTTACTGCCCAGGTGTCCTTGCTTaGCTGTCATACATAGACAAAAGGACTTGTTTACCC +
Preference number: 4 (lower is better)
Translates to: GCGCSYCPGVLA*LSYIDKRTCLP
Trigger: GGGTAAACAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTGCAACCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
3UTR CAA 72 bp TGTAGTGTTTCTATAGTAGTGTATGTAGTGTGCTGGTaGGCAGGAGGGGTGGGGGCCATGCTAACAATCCTT +
Preference number: 4 (lower is better)
Translates to: CSVSIVVYVVCW*AGGVGAMLTIL
Trigger: AAGGATTGTTAGCATGGCCCCCACCCCTCCTGCCAACCAGCACACTACATACACTACTATAGAAACACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATTCATGCTTGAGGCGGTaGATGTGCTGCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNSCLRR*MCCRKS
Trigger: GCTCTTCCTGCAGCACATTCACCGCCTCAAGCATGA...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCCAATATGCTCATGCTTaGGGCGGTGAATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSQYAHA*GGECAA
Trigger: TGCAGCACATTCACCGCCTCAAGCATGAGCATATTG...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCTCTCCAGGTTTTCTTTaGAAGCCCTTCGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASSPGFL*KPFASQ
Trigger: CTGAGATGCGAAGGGCTTTCAAAGAAAACCTGGAGA...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGTCAAGAAAGACACACTaGAGTTTGCTGGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWSRKTH*SLLAIC
Trigger: GCAGATTGCCAGCAAACTTCAGTGTGTCTTTCTTGA...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTTCTGCTCAAAGTCTTaGTCCAGTCCCAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSFCSKS*SSPSWS
Trigger: TGACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAA...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCCTGGAGGTTCTTTTTaGTTAAGGCAAAAGTATGTG +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESPGGSF*LRQKYV
Trigger: CACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACTCATACTTGTCCTTTaGTGTAGCTATCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: VFLCCREWITSLGRGWRKLILVL*CSYLLT
Trigger: AGTCAGCAGATAGCTACAGCAAAGGACAAGTATGAG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTGTGATTTTTCACAATaGGGCTCACTAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLCDFSQ*GSLTTH
Trigger: ATGAGTGGTTAGTGAGCCGCATTGTGAAAAATCACA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGTGGGTCTCATACAACTaGTCAGCAGGGACAGTATCC +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLWVSYN*SAGTVS
Trigger: GGATACTGTCCCTGCTGAGCAGTTGTATGAGACCCA...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTACACAAAATGGATGTaGTTCAGAATGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLYTKWM*FRMRAS
Trigger: TGATGCCCTCATTCTGAAGCACATCCATTTTGTGTA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp AGCGGACACTACACACATTGTATGTTCCTATTGACTCCAGGCCCACAACATCCACAAGTAAAACAGAGTTaGTGCTCCCACAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGHYTHCMFLLTPGPQHPQVKQS*CSHSGK
Trigger: CTTCCCACTGTGGGAGCAGCAACTCTGTTTTACTTG...TGGATGTTGTGGGCCTGGAGTCAATAGGAACATACAATGTGTGTAGTGTCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGCCCCAGTACAGAAAGTaGTCATTATTGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLPQYRK*SLLTTR
Trigger: GCGGGTGGTCAATAATGACCACTTTCTGTACTGGGG...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGT +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLSMLSM*LVASHG
Trigger: ACCATGGGATGCCACCAGCCACATTGACAACATGGA...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATGGGCTTTGGTTTCTTaGTGTTCCTTCTTAGACTTC +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEWALVS*CSFLDF
Trigger: GAAGTCTAAGAAGGAACACCAAGAAACCAAAGCCCA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGCCGGGGTTTGGGCTTTaGTTTCTTGGTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLPGFGL*FLGVPS
Trigger: AGAAGGAACACCAAGAAACCAAAGCCCAAACCCCGG...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCTGACTTTGTTCAGGTaGGAGATGACATATTTGAAG +
Preference number: 4 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESLTLFR*EMTYLK
Trigger: CTTCAAATATGTCATCTCCCACCTGAACAAAGTCAG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCGTTGCACTAAGGTGCTaGAAGCCAAGTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSVALRC*KPSPHS
Trigger: TGAATGTGGACTTGGCTTTCAGCACCTTAGTGCAAC...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTTTGCTGGCAATCTGCTaGCCTTGCTGTATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPLLAIC*PCCIKL
Trigger: CAGCTTGATACAGCAAGGTCAGCAGATTGCCAGCAA...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCTCAAGAAAGACACACTaGAGTTTGCTGGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASSRKTH*SLLAIC
Trigger: GCAGATTGCCAGCAAACTTCAGTGTGTCTTTCTTGA...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCTACAAGGGATGCTTGTaGATCTCCCGTCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASYKGCL*ISRQSL
Trigger: AAGAGATTGACGGGAGATTCACAAGCATCCCTTGTA...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATCCAGATTGTGGTCTTaGTCAAACTGTCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEESRLWS*SNCLCK
Trigger: TTTGCAAAGACAGTTTGATCAAGACCACAATCTGGA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCAGACACACTGAAGTTTaGTGGCAATCTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASRHTEV*WQSADL
Trigger: AAGGTCAGCAGATTGCCAGCAAACTTCAGTGTGTCT...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCCAAGTAAAACAGAGTTaGTGCTCCCACAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSQVKQS*CSHSGK
Trigger: CTTCCCACTGTGGGAGCAGCAACTCTGTTTTACTTG...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTATGGGGATAATATCCTaGACTTCACAAAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCMGIIS*TSQRKA
Trigger: TGCCTTTCTTTGTGAAGTGCAGGATATTATCCCCAT...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTTTGTGATATCAAAATaGACAGGAGGCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLFVISK*TGGFGL
Trigger: CAAACCAAAGCCTCCTGTGCATTTTGATATCACAAA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGTTGTCAATGTGGCTaGTGGCATCCCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSCCQCG*WHPMVF
Trigger: AAACACCATGGGATGCCACCAGCCACATTGACAACA...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPSMLSM*LVASHG
Trigger: ACCATGGGATGCCACCAGCCACATTGACAACATGGA...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GTGATAGCCATGTGCCCACACTCACAACCACTCAAACTTCCTTACACAGATGTTCACACTGAAGTTTGCTaGCAATCTGCTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: VIAMCPHSQPLKLPYTDVHTEVC*QSADLA
Trigger: AGCAAGGTCAGCAGATTGCCAGCAAACTTCAGTGTG...AACATCTGTGTAAGGAAGTTTGAGTGGTTGTGAGTGTGGGCACATGGCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp GTGATAGCCATGTGCCCACACTCACAACCACTCAAACTTCCTTACACAGATGTTGGTTTAAGTTGCGCTTaGAGTCCAGGAGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VIAMCPHSQPLKLPYTDVGLSCA*SPGVLS
Trigger: TGAAAGGACTCCTGGACTCCAAGCGCAACTTAAACC...AACATCTGTGTAAGGAAGTTTGAGTGGTTGTGAGTGTGGGCACATGGCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGTGAGTGCGACAAGCTaGATGGGGATAATATCCTGC +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPVSATS*MGIISC
Trigger: GCAGGATATTATCCCCATCCAGCTTGTCGCACTCAC...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp GGCTGCCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAATGGGCTTTGGTTTCTTaGTGTTCCTTCTTAGACTTC +
Preference number: 4 (lower is better)
Translates to: GCPCTKQAGASETHDVFKWALVS*CSFLDF
Trigger: GAAGTCTAAGAAGGAACACCAAGAAACCAAAGCCCA...TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTCCGGGGTTTGGGCTTTaGTTTCTTGGTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPPGFGL*FLGVPS
Trigger: AGAAGGAACACCAAGAAACCAAAGCCCAAACCCCGG...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATTGGATGGCCGGGGTTTaGGCTTTGGTTTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNWMAGV*ALVSWC
Trigger: ACACCAAGAAACCAAAGCCCAAACCCCGGCCATCCA...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTCTGACTTTGTTCAGGTaGGAGATGACATATTTGAAG +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCLTLFR*EMTYLK
Trigger: CTTCAAATATGTCATCTCCCACCTGAACAAAGTCAG...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
3UTR CAA 72 bp CATCGTTACACTTGCTTTACAGACAGGTTTCCACTTTaGCTGCGAAACATAAGTTTGGGCACACGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HRYTCFTDRFPL*LRNISLGTRPD
Trigger: GTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAAAGTGGAAACCTGTCTGTAAAGCAAGTGTAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACAATGCATCTTTCAATaGAAATGGGTATCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEQCIFQ*KWVSVS
Trigger: AGAAACCGATACCCATTTTCATTGAAAGATGCATTG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATTGTTGTAGGTGGGGATaGGGACATCTTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNCCRWG*GHLAFL
Trigger: CAAGAAAGCAAGATGTCCGCATCCCCACCTACAACA...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR GCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCTCATACTTGTCCTTTaGTGTAGCTATCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASLILVL*CSYLLT
Trigger: AGTCAGCAGATAGCTACAGCAAAGGACAAGTATGAG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGTACACAAAATGGATGTaGTTCAGAATGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWYTKWM*FRMRAS
Trigger: TGATGCCCTCATTCTGAAGCACATCCATTTTGTGTA...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTTGCTGTATCAAGCTGTaGAGAGTCTCTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPCCIKL*RVSPLV
Trigger: CACAAGTGGAGAGACTCTGCACAGCTTGATACAGCA...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTAGCATCCATGGGCTCTaGGTAGTCAGAAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPSIHGL*VVRRIK
Trigger: TTTGATCCTTCTGACTACGCAGAGCCCATGGATGCT...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTCAGAACCATTACCACTaGCATTGGACTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPQNHYH*HWTGLC
Trigger: ACAAAGCCCAGTCCAATGGCAGTGGTAATGGTTCTG...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTTTAATACAGCTCAGGTaGTCCACTTCATCTAGATTA +
Preference number: 4 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCLIQLR*STSSRL
Trigger: TAATCTAGATGAAGTGGACCACCTGAGCTGTATTAA...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGTCCAAAAGCAACTCTTaGAACTCTTCCTTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLSKSNS*NSSFAR
Trigger: CCGAGCAAAGGAAGAGTTCCAAGAGTTGCTTTTGGA...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCATCACGCTCTGCTTaGAGCTTCTGCAATGCTTTA +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPASRSA*SFCNAL
Trigger: TAAAGCATTGCAGAAGCTCCAAGCAGAGCGTGATGC...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGGGGTGGTACACAAAATaGATGTGCTTCAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLGWYTK*MCFRMR
Trigger: CCTCATTCTGAAGCACATCCATTTTGTGTACCACCC...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTATGGGGTTGGAAGGTTaGTGTCTGGAAAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPMGLEG*CLERVH
Trigger: GTGAACTCTTTCCAGACACCAACCTTCCAACCCCAT...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATCCACTGCCATTGGACTaGGCTTTGTTGATGTTCCGA +
Preference number: 4 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNPLPLD*ALLMFR
Trigger: TCGGAACATCAACAAAGCCCAGTCCAATGGCAGTGG...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp AGCGGACACTACACACATTGTATGTTCCTATTGACTCCAGGCCCACAACATCCACTGTTTCATATGGAATaGCAGCATTGTCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SGHYTHCMFLLTPGPQHPLFHME*QHCPLY
Trigger: ATAAAGGGGACAATGCTGTCATTCCATATGAAACAG...TGGATGTTGTGGGCCTGGAGTCAATAGGAACATACAATGTGTGTAGTGTCCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR TCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCTGTTTCATATGGAATaGCAGCATTGTCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASLFHME*QHCPLY
Trigger: ATAAAGGGGACAATGCTGTCATTCCATATGAAACAG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGCAATGCATCTTTCAATaGAAATGGGTATCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWQCIFQ*KWVSVS
Trigger: AGAAACCGATACCCATTTTCATTGAAAGATGCATTG...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGAATGCTTTAAATCTCTaGTCTTCGCCCAGAACATCC +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLNALNL*SSPRTS
Trigger: GGATGTTCTGGGCGAAGAGCAGAGATTTAAAGCATT...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCATGGGGATAATATCCTaGACTTCACAAAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASMGIIS*TSQRKA
Trigger: TGCCTTTCTTTGTGAAGTGCAGGATATTATCCCCAT...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCGAAGATTTACAAGTTTaGGATTGCAGGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSEDLQV*DCRTGE
Trigger: CTCTCCTGTCCTGCAATCCCAAACTTGTAAATCTTC...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCCTCATCTGTTTCATATaGAATGACAGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSLICFI*NDSIVP
Trigger: GGGGACAATGCTGTCATTCCATATGAAACAGATGAG...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCAAAATTGCTCATTATaGAAGATAGCCCGTCATTTC +
Preference number: 4 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASQNCSL*KIARHF
Trigger: GAAATGACGGGCTATCTTTCATAATGAGCAATTTTG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTCCAGATTGTGGTCTTaGTCAAACTGTCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSSRLWS*SNCLCK
Trigger: TTTGCAAAGACAGTTTGATCAAGACCACAATCTGGA...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTCTCTTATCAATGAGTTaGACTAAGGTGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPLLSMS*TKVLKA
Trigger: GGCTTTCAGCACCTTAGTGCAACTCATTGATAAGAG...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR GCA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGTGATTTTTCACAATaGGGCTCACTAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSCDFSQ*GSLTTH
Trigger: ATGAGTGGTTAGTGAGCCGCATTGTGAAAAATCACA...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CCA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGATGCTAAATGAGGAATaGTATGAAAGAACAGACAGC +
Preference number: 4 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLMLNEE*YERTDS
Trigger: GCTGTCTGTTCTTTCATACCATTCCTCATTTAGCAT...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR TCA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTCAGTGCAAAAATACATaGGTTTTTCAGCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPQCKNT*VFQLKQ
Trigger: TTGCTTCAGCTGAAAAACTCATGTATTTTTGCACTG...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATCAGCTGAAGCAAGCTaGGTGGCTGCGGCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVSAEAS*VAAALL
Trigger: CAAGAGAGCCGCAGCCACCAAGCTTGCTTCAGCTGA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAACACCCATCTTCTCCTaGCTGGGCTTAGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVTPIFS*LGLASS
Trigger: GCTGGACGCTAAGCCCAGCAAGGAGAAGATGGGTGT...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCCAGCGTGTGTTCGGCTaGGAGCTGAGAGGACAGCAA +
Preference number: 5 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPQRVFG*ELRGQQ
Trigger: TTGCTGTCCTCTCAGCTCCAAGCCGAACACACGCTG...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAGTCCCCTTTATAACCTaGGGATGCCTGGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVVPFIT*GCLVLL
Trigger: GAGGAGGACCAGGCATCCCAAGGTTATAAAGGGGAC...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TCCCCACTTGGCCCCAGGCTGCTGTGGAGACTGCGGCCCTTCATTTCTCTCAGGACAGCAATGGCTGCATaGGGGACTGAGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SPLGPRLLWRLRPFISLRTAMAA*GTEGLE
Trigger: CTCCAACCCCTCAGTCCCCAATGCAGCCATTGCTGT...CCTGAGAGAAATGAAGGGCCGCAGTCTCCACAGCAGCCTGGGGCCAAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATTTCTGCTCAAAGTCTaGCTCCAGTCCCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVFLLKV*LQSQLV
Trigger: GACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAAA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAGGCATCACGCTCTGCTaGGAGCTTCTGCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVGITLC*ELLQCF
Trigger: AAAGCATTGCAGAAGCTCCAAGCAGAGCGTGATGCC...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTACTGAGTCCTGTAAGTTaGAGTTGCAGAGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVLSPVS*SCRGVS
Trigger: GCTCACCCCTCTGCAACTCAAACTTACAGGACTCAG...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCCATTACCACTGCCATaGGACTGGGCTTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRPLPLP*DWALLM
Trigger: CATCAACAAAGCCCAGTCCAATGGCAGTGGTAATGG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATCAGCTGAAGCAAGCTaGGTGGCTGCGGCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRSAEAS*VAAALL
Trigger: CAAGAGAGCCGCAGCCACCAAGCTTGCTTCAGCTGA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGCGGGCAAGGCCATCTTaGCCTAAGATAACCAAATTG +
Preference number: 5 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRRARPS*PKITKL
Trigger: CAATTTGGTTATCTTAGGCAAAGATGGCCTTGCCCG...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCGAATGGTAATGATCTaGCCCTGGGTGCTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSRMVMI*PWVLSW
Trigger: CCACGACAGCACCCAGGGCAAGATCATTACCATTCG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTACCATTACCACTGCCATaGGACTGGGCTTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVPLPLP*DWALLM
Trigger: CATCAACAAAGCCCAGTCCAATGGCAGTGGTAATGG...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTACTGGAGTCACCACTGTaGTTAAGGGCACCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVLESPL*LRAPQN
Trigger: ATTTTGGGGTGCCCTTAACAACAGTGGTGACTCCAG...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAACAGCAATGGCTGCATaGGGGACTGAGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRTAMAA*GTEGLE
Trigger: CTCCAACCCCTCAGTCCCCAATGCAGCCATTGCTGT...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTCCCTGGCTGCTGCAGTCCTAGAGTGACCCAGTCCATCCCCTGCCCTCCCGTCTCCAGGTTTTCTTaGAAAGCCCTTCGCATCTCA +
Preference number: 5 (lower is better)
Translates to: SVPGCCSPRVTQSIPCPPVSRFS*KALRIS
Trigger: TGAGATGCGAAGGGCTTTCAAAGAAAACCTGGAGAC...GGGAGGGCAGGGGATGGACTGGGTCACTCTAGGACTGCAGCAGCCAGGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGGACAGTGACTCCTTaGAATTGTAAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRRTVTP*NCKGRD
Trigger: GTCTCTGCCTTTACAATTCAAAGGAGTCACTGTCCT...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTATTGTTGTGGCTGACTTaGTTCAGGTGGGAGATGACA +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVLLWLT*FRWEMT
Trigger: TGTCATCTCCCACCTGAACAAAGTCAGCCACAACAA...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTGGGGATGCGGACATCTaGCTTTCTTGCCATCATCAT +
Preference number: 5 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSGDADI*LSCHHH
Trigger: ATGATGATGGCAAGAAAGCAAGATGTCCGCATCCCC...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGAAGAGCTCGAATTTCATaGGCCAACTCTCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRRARIS*ANSRAR
Trigger: CCTTGCCCGAGAGTTGGCCAATGAAATTCGAGCTCT...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGGAGTCCTTTCAGAACTaGACTGATCTGCTTCTCATT +
Preference number: 5 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRESFQN*TDLLLI
Trigger: AATGAGAAGCAGATCAGTCAAGTTCTGAAAGGACTC...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGTTGGGCTTTGGTTTCTaGGTGTTCCTTCTTAGACTT +
Preference number: 5 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRLGFGF*VFLLRL
Trigger: AAGTCTAAGAAGGAACACCAAGAAACCAAAGCCCAA...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp CAGCACTTGGGCGCACAAAGCGGTTACACAGACAAGACTTCCCAATaGCGCACTGGCCTTTCTCCTTCTCAGTGCCTGACAATCCCACCA +
Preference number: 5 (lower is better)
Translates to: QHLGAQSGYTDKTSQ*RTGLSPSQCLTIPP
Trigger: TGGTGGGATTGTCAGGCACTGAGAAGGAGAAAGGCCAGTGCGGCATTGGGAAGTCTTGTCTGTGTAACCGCTTTGTGCGCCCAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp GGGCGCACAAAGCGGTTACACAGACAAGACTTCCCAATGCCGCACTaGCCTTTCTCCTTCTCAGTGCCTGACAATCCCACCACACTGATG +
Preference number: 5 (lower is better)
Translates to: GRTKRLHRQDFPMPH*PFSFSVPDNPTTLM
Trigger: CATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAGGCCAGTGCGGCATTGGGAAGTCTTGTCTGTGTAACCGCTTTGTGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATGGTGGGGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGACCTGGAGGTTCTTTTaGCTTAAGGCAAAAGTATGT +
Preference number: 5 (lower is better)
Translates to: MVGPDAGAGRQVGPRGPRTWRFF*LKAKVC
Trigger: ACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGT...CCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCCCCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGGGCATCACGCTCTGCTaGGAGCTTCTGCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: VRDVLAARMAAHALNRLEGITLC*ELLQCF
Trigger: AAAGCATTGCAGAAGCTCCAAGCAGAGCGTGATGCC...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTAACATCAGCCAAATCTTaGATACTTGCAGTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVTSAKS*ILAVEL
Trigger: TAGCTCCACTGCAAGTATCAAAGATTTGGCTGATGT...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCAGCGTGTGTTCGGCTaGGAGCTGAGAGGACAGCAA +
Preference number: 5 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESQRVFG*ELRGQQ
Trigger: TTGCTGTCCTCTCAGCTCCAAGCCGAACACACGCTG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp ACAAGACTTCCCAATGCCGCACTGGCCTTTCTCCTTCTCAGTGCCTaGCAATCCCACCACACTGATGTTGTAGGTGGGGATGCGGACATC +
Preference number: 5 (lower is better)
Translates to: TRLPNAALAFLLLSA*QSHHTDVVGGDADI
Trigger: GATGTCCGCATCCCCACCTACAACATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAGGCCAGTGCGGCATTGGGAAGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp GAGCTGCCAGGTACAGCTTTCTCCGACGCTCAATATGCTCATGCTTaGGGCGGTGAATGTGCTGCAGGAAGAGCTTCTTGGCCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: ELPGTAFSDAQYAHA*GGECAAGRASWPSV
Trigger: CACAGAAGGCCAAGAAGCTCTTCCTGCAGCACATTCACCGCCTCAAGCATGAGCATATTGAGCGTCGGAGAAAGCTGTACCTGGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp GCTGGACAGCTTGGGCATGTCTCCTTCGTCGGGTGGTACACAAAATaGATGTGCTTCAGAATGAGGGCATCACGCTCTGCTTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: AGQLGHVSFVGWYTK*MCFRMRASRSAWSF
Trigger: GAAGCTCCAAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCCATTTTGTGTACCACCCGACGAAGGAGACATGCCCAAGCTGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCTGCAGGAAGAGCTTCTaGGCCTTCTGTGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESCRKSF*AFCVPS
Trigger: GGAAGGGACACAGAAGGCCAAGAAGCTCTTCCTGCA...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTGCAGGAAGAGCTTCTaGGCCTTCTGTGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLCRKSF*AFCVPS
Trigger: GGAAGGGACACAGAAGGCCAAGAAGCTCTTCCTGCA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTTGGCCCACTGCTAAGGCTATGGGTCTGGGGGCAGAGCACAAGGTACCCTGTCTCCAAAAGCAACTCTaGGAACTCTTCCTTTGCTCG +
Preference number: 5 (lower is better)
Translates to: SWPTAKAMGLGAEHKVPCLQKQL*ELFLCS
Trigger: CGAGCAAAGGAAGAGTTCCAAGAGTTGCTTTTGGAG...ACAGGGTACCTTGTGCTCTGCCCCCAGACCCATAGCCTTAGCAGTGGGCCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GGCCTGACGCTGGTGCAGGCAGACAGGTTGGGCCAAGGGGTCCAAGGAGCAGTACTTGTGTCCCCTCTCTaGTTAACTAAAATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: GLTLVQADRLGQGVQGAVLVSPL*LTKIKV
Trigger: GACCTTAATTTTAGTTAACAAGAGAGGGGACACAAG...TACTGCTCCTTGGACCCCTTGGCCCAACCTGTCTGCCTGCACCAGCGTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACCAGCTCTGGGGGAGTaGAACACTTCCTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEPALGE*NTSSVV
Trigger: CACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTGG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTCCAGGCGAGTGCATCTaGTCCTGTACAGCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAPGECI*SCTAQA
Trigger: AGCCTGTGCTGTACAGGACAAGATGCACTCGCCTGG...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGATGGATGGCCGGGGTTaGGGCTTTGGTTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLMDGRG*GFGFLV
Trigger: CACCAAGAAACCAAAGCCCAAACCCCGGCCATCCAT...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp CGCACTGGCCTTTCTCCTTCTCAGTGCCTGACAATCCCACCACACTaGTGTTGTAGGTGGGGATGCGGACATCTTGCTTTCTTGCCATCA +
Preference number: 5 (lower is better)
Translates to: RTGLSPSQCLTIPPH*CCRWGCGHLAFLPS
Trigger: TGATGGCAAGAAAGCAAGATGTCCGCATCCCCACCTACAACATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAGGCCAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp AGGTACAGCTTTCTCCGACGCTCAATATGCTCATGCTTGAGGCGGTaGATGTGCTGCAGGAAGAGCTTCTTGGCCTTCTGTGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: RYSFLRRSICSCLRR*MCCRKSFLAFCVPS
Trigger: GGAAGGGACACAGAAGGCCAAGAAGCTCTTCCTGCAGCACATTCACCGCCTCAAGCATGAGCATATTGAGCGTCGGAGAAAGCTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp CCTGTAAGTTTGAGTTGCAGAGGGGTGAGCCAGCTCTGGGGGAGTTaGACACTTCCTCAGTGGTGCTGCAGGCCTCAGCTACATTATCAT +
Preference number: 5 (lower is better)
Translates to: PVSLSCRGVSQLWGS*TLPQWCCRPQLHYH
Trigger: ATGATAATGTAGCTGAGGCCTGCAGCACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTGGCTCACCCCTCTGCAACTCAAACTTACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp ACACAATCCTCCAGGGAGCGGCTAACTTCTCCCCAGTACAGAAAGTaGTCATTATTGACCACCCGCCCACCAAAGTCACTGGTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: TQSSRERLTSPQYRK*SLLTTRPPKSLVLR
Trigger: CCTTAGCACCAGTGACTTTGGTGGGCGGGTGGTCAATAATGACCACTTTCTGTACTGGGGAGAAGTTAGCCGCTCCCTGGAGGATTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTACACCCATCTTCTCCTaGCTGGGCTTAGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTTPIFS*LGLASS
Trigger: GCTGGACGCTAAGCCCAGCAAGGAGAAGATGGGTGT...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCACAGGAGGCTTTGGTTaGACTGGGGGAGGTACTTTG +
Preference number: 5 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESTGGFG*TGGGTL
Trigger: CAAAGTACCTCCCCCAGTCAAACCAAAGCCTCCTGT...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCTCGCTCTAGGGAACTaGTGTCCATCTCACTGTCAG +
Preference number: 5 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESLALGN*CPSHCQ
Trigger: CTGACAGTGAGATGGACACAAGTTCCCTAGAGCGAG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTGTCCCCTTTATAACCTaGGGATGCCTGGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAVPFIT*GCLVLL
Trigger: GAGGAGGACCAGGCATCCCAAGGTTATAAAGGGGAC...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAGCCGGGGTTTGGGCTTaGGTTTCTTGGTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEAGVWA*VSWCSF
Trigger: GAAGGAACACCAAGAAACCAAAGCCCAAACCCCGGC...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATGAAGTCAGGGCAGGGGACCAACTGCAACCTTAGCGGACACTACACACATTGTATGGATGGCCGGGGTTaGGGCTTTGGTTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: MKSGQGTNCNLSGHYTHCMDGRG*GFGFLV
Trigger: CACCAAGAAACCAAAGCCCAAACCCCGGCCATCCAT...ACAATGTGTGTAGTGTCCGCTAAGGTTGCAGTTGGTCCCCTGCCCTGACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS TCA 90 bp CTCCAGTCCCAGCTGGTCAGTGCAAAAATACATGAGTTTTTCAGCTaGAGCAAGCTTGGTGGCTGCGGCTCTCTTGATGTAGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQSQLVSAKIHEFFS*SKLGGCGSLDVGLQ
Trigger: CTGCAGCCCTACATCAAGAGAGCCGCAGCCACCAAGCTTGCTTCAGCTGAAAAACTCATGTATTTTTGCACTGACCAGCTGGGACTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp GGTAGACATAGTCCTGGTACTCAGGGGAGGCCTGCATCTTTCGGCTaGCACTCGGCCAGTTCTCATTGTGATTTTTCACAATGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: GRHSPGTQGRPASFG*HSASSHCDFSQCGS
Trigger: TGAGCCGCATTGTGAAAAATCACAATGAGAACTGGCCGAGTGTCAGCCGAAAGATGCAGGCCTCCCCTGAGTACCAGGACTATGTCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp CAGCTTGGGCATGTCTCCTTCGTCGGGTGGTACACAAAATGGATGTaGTTCAGAATGAGGGCATCACGCTCTGCTTGGAGCTTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: QLGHVSFVGWYTKWM*FRMRASRSAWSFCN
Trigger: ATTGCAGAAGCTCCAAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCCATTTTGTGTACCACCCGACGAAGGAGACATGCCCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp AGCTTCTGCAATGCTTTAAATCTCTGCTCTTCGCCCAGAACATCCTaGATGACACCCATCTTCTCCTTGCTGGGCTTAGCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFCNALNLCSSPRTS*MTPIFSLLGLASSS
Trigger: GGAGCTGGACGCTAAGCCCAGCAAGGAGAAGATGGGTGTCATCCAGGATGTTCTGGGCGAAGAGCAGAGATTTAAAGCATTGCAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTTTTCTGCTCAAAGTCTaGCTCCAGTCCCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAFLLKV*LQSQLV
Trigger: GACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAAA...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GCCGACAAGGGTTGCCACATCAGGAGCAGAGTATGGGGAGGCTGCTGGGGAAGTCCACTATGGGCTTTTTaGTTTTTGCAAGCTGATTGT +
Preference number: 5 (lower is better)
Translates to: ADKGCHIRSRVWGGCWGSPLWAF*FLQADC
Trigger: ACAATCAGCTTGCAAAAACAAAAAAGCCCATAGTGG...ACTTCCCCAGCAGCCTCCCCATACTCTGCTCCTGATGTGGCAACCCTTGTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCAGCTGTCTCAGCACACCTGGTCCTAGGACTACATGTGTGCACCACAGTTACTCGCTCATTTTCCATGTaGTCAATGTGGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PAVSAHLVLGLHVCTTVTRSFSM*SMWLVA
Trigger: TGCCACCAGCCACATTGACAACATGGAAAATGAGCG...AGTAACTGTGGTGCACACATGTAGTCCTAGGACCAGGTGTGCTGAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGCATGGGGTTGGAAGGTaGGTGTCTGGAAAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLHGVGR*VSGKSS
Trigger: TGAACTCTTTCCAGACACCAACCTTCCAACCCCATG...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTTCAAGTAAAACAGAGTaGCTGCTCCCACAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTSSKTE*LLPQWE
Trigger: TTCCCACTGTGGGAGCAGCAACTCTGTTTTACTTGA...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATCCTGTAAGTTTGAGTaGCAGAGGGGTGAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEESCKFE*QRGEPA
Trigger: AGCTGGCTCACCCCTCTGCAACTCAAACTTACAGGA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCCAGGCGAGTGCATCTaGTCCTGTACAGCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASPGECI*SCTAQA
Trigger: AGCCTGTGCTGTACAGGACAAGATGCACTCGCCTGG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp AGGGCATCACGCTCTGCTTGGAGCTTCTGCAATGCTTTAAATCTCTaGTCTTCGCCCAGAACATCCTGGATGACACCCATCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RASRSAWSFCNALNL*SSPRTSWMTPIFSL
Trigger: CAAGGAGAAGATGGGTGTCATCCAGGATGTTCTGGGCGAAGAGCAGAGATTTAAAGCATTGCAGAAGCTCCAAGCAGAGCGTGATGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp CTTCGCATCTCAGCTCTCTTCCTCTCGTTCCTCAGCTTCTCCAAGTaGGTCTCATACAACTGCTCAGCAGGGACAGTATCCATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: LRISALFLSFLSFSK*VSYNCSAGTVSIKS
Trigger: TGACTTGATGGATACTGTCCCTGCTGAGCAGTTGTATGAGACCCACTTGGAGAAGCTGAGGAACGAGAGGAAGAGAGCTGAGATGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTCAGAGATGTCTTGGCTGCCAGGATGGCTGCCCATGCACTAAACAGGCTGGAGACTAACCACTCATACTaGTCCTTTGCTGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: VRDVLAARMAAHALNRLETNHSY*SFAVAI
Trigger: GATAGCTACAGCAAAGGACAAGTATGAGTGGTTAGT...CTCCAGCCTGTTTAGTGCATGGGCAGCCATCCTGGCAGCCAAGACATCTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCTCCAAAAGCAACTCTaGGAACTCTTCCTTTGCTCG +
Preference number: 5 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESLQKQL*ELFLCS
Trigger: CGAGCAAAGGAAGAGTTCCAAGAGTTGCTTTTGGAG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACATGGGGTTGGAAGGTaGGTGTCTGGAAAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VFLCCREWITSLGRGWRKHGVGR*VSGKSS
Trigger: TGAACTCTTTCCAGACACCAACCTTCCAACCCCATG...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAAGGTTTAAGTTGCGCTaGGAGTCCAGGAGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VFLCCREWITSLGRGWRKRFKLR*ESRSPF
Trigger: GAAAGGACTCCTGGACTCCAAGCGCAACTTAAACCT...TTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAGAAAGGCACGTAACATaGCCAAGGAGGCCTTACGTT +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEERHVT*PRRPYV
Trigger: AACGTAAGGCCTCCTTGGCAATGTTACGTGCCTTTC...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCGAATGGTAATGATCTaGCCCTGGGTGCTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASRMVMI*PWVLSW
Trigger: CCACGACAGCACCCAGGGCAAGATCATTACCATTCG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTCTCGCTCTAGGGAACTaGTGTCCATCTCACTGTCAG +
Preference number: 5 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTLALGN*CPSHCQ
Trigger: CTGACAGTGAGATGGACACAAGTTCCCTAGAGCGAG...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GGAGACAGCCAGGACCTGGGCCAGAGGCCAGTCATCCTCCTCTTATCCTACAGATGGGAGATGACATATTaGAAGACTTCATGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GDSQDLGQRPVILLLSYRWEMTY*KTSWFS
Trigger: GGAAAACCATGAAGTCTTCAAATATGTCATCTCCCA...TCTGTAGGATAAGAGGAGGATGACTGGCCTCTGGCCCAGGTCCTGGCTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTTGTTGTGGCTGACTTaGTTCAGGTGGGAGATGACA +
Preference number: 5 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLLLWLT*FRWEMT
Trigger: TGTCATCTCCCACCTGAACAAAGTCAGCCACAACAA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp GGGGAGGCCTGCATCTTTCGGCTGACACTCGGCCAGTTCTCATTGTaGTTTTTCACAATGCGGCTCACTAACCACTCATACTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: GEACIFRLTLGQFSL*FFTMRLTNHSYLSF
Trigger: AAAGGACAAGTATGAGTGGTTAGTGAGCCGCATTGTGAAAAATCACAATGAGAACTGGCCGAGTGTCAGCCGAAAGATGCAGGCCTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp TGGATGTGCTTCAGAATGAGGGCATCACGCTCTGCTTGGAGCTTCTaGAATGCTTTAAATCTCTGCTCTTCGCCCAGAACATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: WMCFRMRASRSAWSF*NALNLCSSPRTSWM
Trigger: CATCCAGGATGTTCTGGGCGAAGAGCAGAGATTTAAAGCATTGCAGAAGCTCCAAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp CAATGCCAGCAGAAGCCGGATCAAGAAAGACACACTGAAGTTTGCTaGCAATCTGCTGACCTTGCTGTATCAAGCTGTGCAGAGTCTCTC +
Preference number: 5 (lower is better)
Translates to: QCQQKPDQERHTEVC*QSADLAVSSCAESL
Trigger: GAGAGACTCTGCACAGCTTGATACAGCAAGGTCAGCAGATTGCCAGCAAACTTCAGTGTGTCTTTCTTGATCCGGCTTCTGCTGGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp GTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAAGCCGTGCTTCGATGAGGTaGAAAAGTCTGATCGTCAAT +
Preference number: 5 (lower is better)
Translates to: VPLLQGMDHKSGKGLEESRASMR*KSLIVN
Trigger: ATTGACGATCAGACTTTTCAACCTCATCGAAGCACG...GCTTTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCAGAGCTCGAATTTCATaGGCCAACTCTCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASRARIS*ANSRAR
Trigger: CCTTGCCCGAGAGTTGGCCAATGAAATTCGAGCTCT...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CACATGCAGCAGCCTCCCCTGGTTCATAACTGTTCACAGCAGGATGGCTCCACTGAGTCCTTTCAGAACTaGACTGATCTGCTTCTCATT +
Preference number: 5 (lower is better)
Translates to: HMQQPPLVHNCSQQDGSTESFQN*TDLLLI
Trigger: AATGAGAAGCAGATCAGTCAAGTTCTGAAAGGACTC...AGTGGAGCCATCCTGCTGTGAACAGTTATGAACCAGGGGAGGCTGCTGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGCTAACCAGGTTTAAGTaGCGCTTGGAGTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWLTRFK*RLESRS
Trigger: ACTCCTGGACTCCAAGCGCAACTTAAACCTGGTTAG...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGGAAAGGCACGTAACATaGCCAAGGAGGCCTTACGTT +
Preference number: 5 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWERHVT*PRRPYV
Trigger: AACGTAAGGCCTCCTTGGCAATGTTACGTGCCTTTC...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTCCAGCTCTGGGGGAGTaGAACACTTCCTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPPALGE*NTSSVV
Trigger: CACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTGG...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACCATTGGACTGGGCTTaGTTGATGTTCCGAATGGTA +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEPLDWA*LMFRMV
Trigger: TACCATTCGGAACATCAACAAAGCCCAGTCCAATGG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp AAAGATAGCCCGTCATTTCCCTCCAGTTCCATAGAGAACTTGGAATaGTCTTTGGACAGGGAGGGCAATGTCGCATCTTCCCGAAACAGG +
Preference number: 5 (lower is better)
Translates to: KDSPSFPSSSIENLE*SLDREGNVASSRNR
Trigger: CCTGTTTCGGGAAGATGCGACATTGCCCTCCCTGTCCAAAGATCATTCCAAGTTCTCTATGGAACTGGAGGGAAATGACGGGCTATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp ATAGCGCCATCAGTGAGTGCGACAAGCTGGATGGGGATAATATCCTaGACTTCACAAAGAAAGGCACGTAACATTGCCAAGGAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: IAPSVSATSWMGIIS*TSQRKARNIAKEAL
Trigger: TAAGGCCTCCTTGGCAATGTTACGTGCCTTTCTTTGTGAAGTGCAGGATATTATCCCCATCCAGCTTGTCGCACTCACTGATGGCGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp TTGTTGATGTTCCGAATGGTAATGATCTTGCCCTGGGTGCTGTCGTaGGGCACCGAGTATATGTTTTCTTCCTCATTCCTTGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: LLMFRMVMILPWVLS*GTEYMFSSSFLGLT
Trigger: GGTCAAGCCAAGGAATGAGGAAGAAAACATATACTCGGTGCCCCACGACAGCACCCAGGGCAAGATCATTACCATTCGGAACATCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp TTGGACTGGGCTTTGTTGATGTTCCGAATGGTAATGATCTTGCCCTaGGTGCTGTCGTGGGGCACCGAGTATATGTTTTCTTCCTCATTC +
Preference number: 5 (lower is better)
Translates to: LDWALLMFRMVMILP*VLSWGTEYMFSSSF
Trigger: GAATGAGGAAGAAAACATATACTCGGTGCCCCACGACAGCACCCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGCCCAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp CTTGTGTCCATCTCACTGTCAGAACCATTACCACTGCCATTGGACTaGGCTTTGTTGATGTTCCGAATGGTAATGATCTTGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LVSISLSEPLPLPLD*ALLMFRMVMILPWV
Trigger: CACCCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGCCCAGTCCAATGGCAGTGGTAATGGTTCTGACAGTGAGATGGACACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAACGTGCTTCGATGAGGTaGAAAAGTCTGATCGTCAAT +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEERASMR*KSLIVN
Trigger: ATTGACGATCAGACTTTTCAACCTCATCGAAGCACG...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCCGCTCATTTTCCATGTaGTCAATGTGGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASRSFSM*SMWLVA
Trigger: TGCCACCAGCCACATTGACAACATGGAAAATGAGCG...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAGGAAGATTTACAAGTTaGGGATTGCAGGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEGRFTS*GLQDRR
Trigger: TCTCCTGTCCTGCAATCCCAAACTTGTAAATCTTCC...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGTCTCGACTTAAGTCATaGTCTAGGACATCTATAGCG +
Preference number: 5 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLSRLKS*SRTSIA
Trigger: CGCTATAGATGTCCTAGACAATGACTTAAGTCGAGA...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAAACTGGGGGAGGTACTTaGTTGTTCAGTTTACTCTCA +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEETGGGT*LFSLLS
Trigger: TGAGAGTAAACTGAACAACAAAGTACCTCCCCCAGT...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCCGGGGTTTGGGCTTaGGTTTCTTGGTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPAGVWA*VSWCSF
Trigger: GAAGGAACACCAAGAAACCAAAGCCCAAACCCCGGC...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp GAAAGAGCTCAAGTTTATGCTGGGGCTGGCTACAAGGGATGCTTGTaGATCTCCCGTCAATCTCTTGTGCAATTTCCTCTCCCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: ERAQVYAGAGYKGCL*ISRQSLVQFPLPLL
Trigger: TAACAGAGGGAGAGGAAATTGCACAAGAGATTGACGGGAGATTCACAAGCATCCCTTGTAGCCAGCCCCAGCATAAACTTGAGCTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp TGTTTCATATGGAATGACAGCATTGTCCCCTTTATAACCTTGGGATaGCTGGTCCTCCTCTTTCTTTCGGATGGGTCCCAGCTCATCATC +
Preference number: 5 (lower is better)
Translates to: CFIWNDSIVPFITLG*LVLLFLSDGSQLII
Trigger: GATGATGAGCTGGGACCCATCCGAAAGAAAGAGGAGGACCAGGCATCCCAAGGTTATAAAGGGGACAATGCTGTCATTCCATATGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp ACTCTTCATGGCCCCTGCCACAGTGTTCACAGTGAAGTCTTTCTCTaGCAGGTCCAGATTGTGGTCTTGATCAAACTGTCTTTGCAAACT +
Preference number: 5 (lower is better)
Translates to: TLHGPCHSVHSEVFL*QVQIVVLIKLSLQT
Trigger: AGTTTGCAAAGACAGTTTGATCAAGACCACAATCTGGACCTGGCAGAGAAAGACTTCACTGTGAACACTGTGGCAGGGGCCATGAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCGGGGATGCGGACATCTaGCTTTCTTGCCATCATCAT +
Preference number: 5 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSGDADI*LSCHHH
Trigger: ATGATGATGGCAAGAAAGCAAGATGTCCGCATCCCC...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCAGAAAGTGGTCATTATaGACCACCCGCCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSRKWSL*TTRPPK
Trigger: CTTTGGTGGGCGGGTGGTCAATAATGACCACTTTCT...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTACTAACCACTCATACTaGTCCTTTGCTGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: LEESHTLGIGTKLSSCCATNHSY*SFAVAI
Trigger: GATAGCTACAGCAAAGGACAAGTATGAGTGGTTAGT...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCAGTCATCCTCCTCTTATCCTACAGAGATAAAGGCAGGGTGGCAGTCCACCTGCTTGTGTCCCCTCTCTaGTTAACTAAAATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: PVILLLSYRDKGRVAVHLLVSPL*LTKIKV
Trigger: GACCTTAATTTTAGTTAACAAGAGAGGGGACACAAG...CAGGTGGACTGCCACCCTGCCTTTATCTCTGTAGGATAAGAGGAGGATGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATTCCTGTAAGTTTGAGTaGCAGAGGGGTGAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNSCKFE*QRGEPA
Trigger: AGCTGGCTCACCCCTCTGCAACTCAAACTTACAGGA...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTGGGGGAGGTACTTTGTaGTTCAGTTTACTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAGGGTL*FSLLSK
Trigger: TTTTGAGAGTAAACTGAACAACAAAGTACCTCCCCC...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTACTGGGGGAGGTACTTaGTTGTTCAGTTTACTCTCA +
Preference number: 5 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTTGGGT*LFSLLS
Trigger: TGAGAGTAAACTGAACAACAAAGTACCTCCCCCAGT...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTACAGGAGGCTTTGGTTaGACTGGGGGAGGTACTTTG +
Preference number: 5 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPTGGFG*TGGGTL
Trigger: CAAAGTACCTCCCCCAGTCAAACCAAAGCCTCCTGT...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGCTGGAGTCACCACTGTaGTTAAGGGCACCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLLESPL*LRAPQN
Trigger: ATTTTGGGGTGCCCTTAACAACAGTGGTGACTCCAG...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp TCTTCAGCACTTCCTTCAGAGCATGCAGCTTCTGTTCCCTGTCGTTaGTTTTGTGAGCTTCCACCAAGTCAATCTGCATGCTGTATGGTA +
Preference number: 5 (lower is better)
Translates to: SSALPSEHAASVPCR*FCELPPSQSACCMV
Trigger: TACCATACAGCATGCAGATTGACTTGGTGGAAGCTCACAAAATCAACGACAGGGAACAGAAGCTGCATGCTCTGAAGGAAGTGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp TCAACCAGCAGCTTCCCATCTGGCATCTGTTTCTGCTCAAAGTCTTaGTCCAGTCCCAGCTGGTCAGTGCAAAAATACATGAGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: STSSFPSGICFCSKS*SSPSWSVQKYMSFS
Trigger: TGAAAAACTCATGTATTTTTGCACTGACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAAACAGATGCCAGATGGGAAGCTGCTGGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp ACTGATCAAGTGTTCAATCTTAGCATCTACACAAGCTGGACAGCTTaGGCATGTCTCCTTCGTCGGGTGGTACACAAAATGGATGTGCTT +
Preference number: 5 (lower is better)
Translates to: TDQVFNLSIYTSWTA*ACLLRRVVHKMDVL
Trigger: AAGCACATCCATTTTGTGTACCACCCGACGAAGGAGACATGCCCAAGCTGTCCAGCTTGTGTAGATGCTAAGATTGAACACTTGATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp AAAGCGAGAACTGATCAAGTGTTCAATCTTAGCATCTACACAAGCTaGACAGCTTGGGCATGTCTCCTTCGTCGGGTGGTACACAAAATG +
Preference number: 5 (lower is better)
Translates to: KARTDQVFNLSIYTS*TAWACLLRRVVHKM
Trigger: CATTTTGTGTACCACCCGACGAAGGAGACATGCCCAAGCTGTCCAGCTTGTGTAGATGCTAAGATTGAACACTTGATCAGTTCTCGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp TCATTGTCTAGGACATCTATAGCGCCATCAGTGAGTGCGACAAGCTaGATGGGGATAATATCCTGCACTTCACAAAGAAAGGCACGTAAC +
Preference number: 5 (lower is better)
Translates to: SLSRTSIAPSVSATS*MGIISCTSQRKARN
Trigger: GTTACGTGCCTTTCTTTGTGAAGTGCAGGATATTATCCCCATCCAGCTTGTCGCACTCACTGATGGCGCTATAGATGTCCTAGACAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCGTCTCCAGGTTTTCTTaGAAAGCCCTTCGCATCTCA +
Preference number: 5 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSVSRFS*KALRIS
Trigger: TGAGATGCGAAGGGCTTTCAAAGAAAACCTGGAGAC...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTAGGTTTAAGTTGCGCTaGGAGTCCAGGAGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPRFKLR*ESRSPF
Trigger: GAAAGGACTCCTGGACTCCAAGCGCAACTTAAACCT...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTTGCTGCGAAACATAAGTTTGGGCACACGGCCAGACTACTAACACACTTCAATCTAACCAGGTTTAAGTaGCGCTTGGAGTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: FAAKHKFGHTARLLTHFNLTRFK*RLESRS
Trigger: ACTCCTGGACTCCAAGCGCAACTTAAACCTGGTTAG...ATTGAAGTGTGTTAGTAGTCTGGCCGTGTGCCCAAACTTATGTTTCGCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp GGCTGCCCATGCACTAAACAGGCTGGAGCCTCAGAAACCCATGACGTATTTAAAACATCAGCCAAATCTTaGATACTTGCAGTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: GCPCTKQAGASETHDVFKTSAKS*ILAVEL
Trigger: TAGCTCCACTGCAAGTATCAAAGATTTGGCTGATGT...TTTAAATACGTCATGGGTTTCTGAGGCTCCAGCCTGTTTAGTGCATGGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp AGCGGACACTACACACATTGTATGTTCCTATTGACTCCAGGCCCACAACATCCAGGAAGATTTACAAGTTaGGGATTGCAGGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: SGHYTHCMFLLTPGPQHPGRFTS*GLQDRR
Trigger: TCTCCTGTCCTGCAATCCCAAACTTGTAAATCTTCC...TGGATGTTGTGGGCCTGGAGTCAATAGGAACATACAATGTGTGTAGTGTCCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGTCAAGTAAAACAGAGTaGCTGCTCCCACAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLSSKTE*LLPQWE
Trigger: TTCCCACTGTGGGAGCAGCAACTCTGTTTTACTTGA...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTTCTCGACTTAAGTCATaGTCTAGGACATCTATAGCG +
Preference number: 5 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTSRLKS*SRTSIA
Trigger: CGCTATAGATGTCCTAGACAATGACTTAAGTCGAGA...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp AGTGTTCCTTTGCTGCAGGGAATGGATCACAAGTCTGGGAAGGGGTTGGAGGAATGGGAGATGACATATTaGAAGACTTCATGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SVPLLQGMDHKSGKGLEEWEMTY*KTSWFS
Trigger: GGAAAACCATGAAGTCTTCAAATATGTCATCTCCCA...TTCCTCCAACCCCTTCCCAGACTTGTGATCCATTCCCTGCAGCAAAGGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCAGATTCACCTTGTTGTaGTGGCTGACTTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASRFTLL*WLTLFR
Trigger: CCTGAACAAAGTCAGCCACAACAACAAGGTGAATCT...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGGAGGAAAGCCACACACTGGGTATAGGCACAAAGCTCTCCTCTTGCTGTGCTATAAGATTCACCTTGTaGTTGTGGCTGACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: LEESHTLGIGTKLSSCCAIRFTL*LWLTLF
Trigger: GAACAAAGTCAGCCACAACAACAAGGTGAATCTTAT...AGCACAGCAAGAGGAGAGCTTTGTGCCTATACCCAGTGTGTGGCTTTCCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 90 bp AATCTCCCGTCAATCTCTTGTGCAATTTCCTCTCCCTCTGTTAGCTaGTCTCGACTTAAGTCATTGTCTAGGACATCTATAGCGCCATCA +
Preference number: 5 (lower is better)
Translates to: NLPSISCAISSPSVS*SRLKSLSRTSIAPS
Trigger: TGATGGCGCTATAGATGTCCTAGACAATGACTTAAGTCGAGAGCAGCTAACAGAGGGAGAGGAAATTGCACAAGAGATTGACGGGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp TCCATCAAGTCAAAGGGAATCCGCTCATTTTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGTGTTTCTTCAAGTACAACAAACCAC +
Preference number: 5 (lower is better)
Translates to: SIKSKGIRSFSMLSM*LVASHGVSSSTTNH
Trigger: GTGGTTTGTTGTACTTGAAGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTCCCTTTGACTTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp AAGCCTGATTGTTCTGACTTCTGTGGTTGCCTTGTCATGGGTGGGAAGGACACTCCACTATGGGCTTTTTaGTTTTTGCAAGCTGATTGT +
Preference number: 5 (lower is better)
Translates to: KPDCSDFCGCLVMGGKDTPLWAF*FLQADC
Trigger: ACAATCAGCTTGCAAAAACAAAAAAGCCCATAGTGG...AGTGTCCTTCCCACCCATGACAAGGCAACCACAGAAGTCAGAACAATCAGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCAGGACAGTGACTCCTTaGAATTGTAAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSRTVTP*NCKGRD
Trigger: GTCTCTGCCTTTACAATTCAAAGGAGTCACTGTCCT...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CCTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCAGATTCACCTTGTTGTaGTGGCTGACTTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PDFVQGQMPPCQEDDWFSRFTLL*WLTLFR
Trigger: CCTGAACAAAGTCAGCCACAACAACAAGGTGAATCT...GGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp ATACATAGACAAAAGGACTTGTTTACCCAGTGGCCACCTGGCAGGTCAGAGTGGATAAGATTCACCTTGTaGTTGTGGCTGACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: IHRQKDLFTQWPPGRSEWIRFTL*LWLTLF
Trigger: GAACAAAGTCAGCCACAACAACAAGGTGAATCTTAT...CCACTCTGACCTGCCAGGTGGCCACTGGGTAAACAAGTCCTTTTGTCTATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 90 bp CAGTGCTTAGTCCTGTGGCTTCGATGTACTCAATGCATCTTTCAATaGAAATGGGTATCGGTTTCTCTGGAGTCACCACTGTTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: QCLVLWLRCTQCIFQ*KWVSVSLESPLLLR
Trigger: CCTTAACAACAGTGGTGACTCCAGAGAAACCGATACCCATTTTCATTGAAAGATGCATTGAGTACATCGAAGCCACAGGACTAAGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp GCCAAGTCCACATTCACATTGGACCTTGCAGAGGTCTCTACAACCTaGAGGTTCTTTTTGCTTAAGGCAAAAGTATGTGCATCTCTAATG +
Preference number: 5 (lower is better)
Translates to: AKSTFTLDLAEVSTT*RFFLLKAKVCASLM
Trigger: CATTAGAGATGCACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGTTGTAGAGACCTCTGCAAGGTCCAATGTGAATGTGGACTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGCTTCCACCTGGAGGTTCTTTTaGCTTAAGGCAAAAGTATGT +
Preference number: 5 (lower is better)
Translates to: LFKAKCHPVKKTIGFPASTWRFF*LKAKVC
Trigger: ACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGT...GGAAGCAGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp TTCCATCTCTACAAAGGACCAACACAGAAGCTACTGAATGGAAGCCATTCCAATCGGGCAAGGCCATCTTaGCCTAAGATAACCAAATTG +
Preference number: 5 (lower is better)
Translates to: FHLYKGPTQKLLNGSHSNRARPS*PKITKL
Trigger: CAATTTGGTTATCTTAGGCAAAGATGGCCTTGCCCG...ATTGGAATGGCTTCCATTCAGTAGCTTCTGTGTTGGTCCTTTGTAGAGATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075845.11
CDS-3UTR CAA 90 bp CAGTTACTGCCCAGGTGTCCTTGCTTTGCTGTCATACATAGACAAAAGGACTTGTTGGGCTTTGGTTTCTaGGTGTTCCTTCTTAGACTT +
Preference number: 5 (lower is better)
Translates to: QLLPRCPCFAVIHRQKDLLGFGF*VFLLRL
Trigger: AAGTCTAAGAAGGAACACCAAGAAACCAAAGCCCAA...CAAGTCCTTTTGTCTATGTATGACAGCAAAGCAAGGACACCTGGGCAGTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp AGTCAAAGGGAATCCGCTCATTTTCCATGTTGTCAATGTGGCTGGTaGCATCCCATGGTGTTTCTTCAAGTACAACAAACCACTTTAAGA +
Preference number: 5 (lower is better)
Translates to: SQRESAHFPCCQCGW*HPMVFLQVQQTTLR
Trigger: TCTTAAAGTGGTTTGTTGTACTTGAAGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTCCCTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp TCAAGTCAAAGGGAATCCGCTCATTTTCCATGTTGTCAATGTGGCTaGTGGCATCCCATGGTGTTTCTTCAAGTACAACAAACCACTTTA +
Preference number: 5 (lower is better)
Translates to: SSQRESAHFPCCQCG*WHPMVFLQVQQTTL
Trigger: TAAAGTGGTTTGTTGTACTTGAAGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTCCCTTTGACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS-3UTR CAA 90 bp CTGATTTTGTTCAAGGCCAAATGCCACCCTGTCAAGAAGACGATTGGTTTTCCTGGGGGAGGTACTTTGTaGTTCAGTTTACTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LILFKAKCHPVKKTIGFPGGGTL*FSLLSK
Trigger: TTTTGAGAGTAAACTGAACAACAAAGTACCTCCCCC...AGGAAAACCAATCGTCTTCTTGACAGGGTGGCATTTGGCCTTGAACAAAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 90 bp ATCAATATTGAGGTCAGACAGAGAGTTCTTCTGATTCCGATCAGATaGTCTGATAAAGCGAGAACTGATCAAGTGTTCAATCTTAGCATC +
Preference number: 5 (lower is better)
Translates to: INIEVRQRVLLIPIR*SDKARTDQVFNLSI
Trigger: GATGCTAAGATTGAACACTTGATCAGTTCTCGCTTTATCAGACCATCTGATCGGAATCAGAAGAACTCTCTGTCTGACCTCAATATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TTTGAGTTGCAGAGGGGTGAGCCAGCTCTGGGGGAGTaGAACACTTCCTCAGTGGTGCTGCAGGCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: FELQRGEPALGE*NTSSVVLQASA
Trigger: AGCTGAGGCCTGCAGCACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTGGCTCACCCCTCTGCAACTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp CCCAATGCCGCACTGGCCTTTCTCCTTCTCAGTGCCTaGCAATCCCACCACACTGATGTTGTAGGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: PNAALAFLLLSA*QSHHTDVVGGD
Trigger: ATCCCCACCTACAACATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAGGCCAGTGCGGCATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp TTTCAGCTGAAGCAAGCTTGGTGGCTGCGGCTCTCTTaGTGTAGGGCTGCAGTGCCGTGCTTCGATGAGGTT +
Preference number: 6 (lower is better)
Translates to: FQLKQAWWLRLS*CRAAVPCFDEV
Trigger: AACCTCATCGAAGCACGGCACTGCAGCCCTACATCAAGAGAGCCGCAGCCACCAAGCTTGCTTCAGCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp GGCGCACAAAGCGGTTACACAGACAAGACTTCCCAATaGCGCACTGGCCTTTCTCCTTCTCAGTGCCTGACA +
Preference number: 6 (lower is better)
Translates to: GAQSGYTDKTSQ*RTGLSPSQCLT
Trigger: TGTCAGGCACTGAGAAGGAGAAAGGCCAGTGCGGCATTGGGAAGTCTTGTCTGTGTAACCGCTTTGTGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp CTTGGTGGCTGCGGCTCTCTTGATGTAGGGCTGCAGTaGCGTGCTTCGATGAGGTTGAAAAGTCTGATCGTC +
Preference number: 6 (lower is better)
Translates to: LGGCGSLDVGLQ*RASMRLKSLIV
Trigger: GACGATCAGACTTTTCAACCTCATCGAAGCACGGCACTGCAGCCCTACATCAAGAGAGCCGCAGCCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp TCCTGTACAGCACAGGCTTACTCACTGCAGATACCTTaGGGCCTCGCTCTAGGGAACTTGTGTCCATCTCAC +
Preference number: 6 (lower is better)
Translates to: SCTAQAYSLQIP*GLALGNLCPSH
Trigger: GTGAGATGGACACAAGTTCCCTAGAGCGAGGCCGCAAGGTATCTGCAGTGAGTAAGCCTGTGCTGTACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp GACAGGGAGGGCAATGTCGCATCTTCCCGAAACAGGTaGTATGATGGAGGCTCCACATCTTCTTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: DREGNVASSRNR*YDGGSTSSSES
Trigger: GGACTCAGAAGAAGATGTGGAGCCTCCATCATACCACCTGTTTCGGGAAGATGCGACATTGCCCTCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp GTCCTGTACAGCACAGGCTTACTCACTGCAGATACCTaGCGGCCTCGCTCTAGGGAACTTGTGTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: VLYSTGLLTADT*RPRSRELVSIS
Trigger: TGAGATGGACACAAGTTCCCTAGAGCGAGGCCGCAAGGTATCTGCAGTGAGTAAGCCTGTGCTGTACAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TCCAGGGAGCGGCTAACTTCTCCCCAGTACAGAAAGTGGTCATTATaGACCACCCGCCCACCAAAGTCACTGGTGCTAAGGACAGAAGTG +
Preference number: 6 (lower is better)
Translates to: SRERLTSPQYRKWSL*TTRPPKSLVLRTEV
Trigger: CACTTCTGTCCTTAGCACCAGTGACTTTGGTGGGCGGGTGGTCAATAATGACCACTTTCTGTACTGGGGAGAAGTTAGCCGCTCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TCCTGTAAGTTTGAGTTGCAGAGGGGTGAGCCAGCTCTGGGGGAGTaGAACACTTCCTCAGTGGTGCTGCAGGCCTCAGCTACATTATCA +
Preference number: 6 (lower is better)
Translates to: SCKFELQRGEPALGE*NTSSVVLQASATLS
Trigger: TGATAATGTAGCTGAGGCCTGCAGCACCACTGAGGAAGTGTTCAACTCCCCCAGAGCTGGCTCACCCCTCTGCAACTCAAACTTACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp GGTACAGCTTTCTCCGACGCTCAATATGCTCATGCTTaGGGCGGTGAATGTGCTGCAGGAAGAGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: GTAFSDAQYAHA*GGECAAGRASW
Trigger: CCAAGAAGCTCTTCCTGCAGCACATTCACCGCCTCAAGCATGAGCATATTGAGCGTCGGAGAAAGCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp CATGTCTCCTTCGTCGGGTGGTACACAAAATGGATGTaGTTCAGAATGAGGGCATCACGCTCTGCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: HVSFVGWYTKWM*FRMRASRSAWS
Trigger: GCTCCAAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCCATTTTGTGTACCACCCGACGAAGGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp CTTGGGCATGTCTCCTTCGTCGGGTGGTACACAAAATaGATGTGCTTCAGAATGAGGGCATCACGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LGHVSFVGWYTK*MCFRMRASRSA
Trigger: AGCAGAGCGTGATGCCCTCATTCTGAAGCACATCCATTTTGTGTACCACCCGACGAAGGAGACATGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CGGCTAACTTCTCCCCAGTACAGAAAGTGGTCATTATaGACCACCCGCCCACCAAAGTCACTGGTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: RLTSPQYRKWSL*TTRPPKSLVLR
Trigger: CCTTAGCACCAGTGACTTTGGTGGGCGGGTGGTCAATAATGACCACTTTCTGTACTGGGGAGAAGTTAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp GACTGGGCTTTGTTGATGTTCCGAATGGTAATGATCTaGCCCTGGGTGCTGTCGTGGGGCACCGAGTATATG +
Preference number: 6 (lower is better)
Translates to: DWALLMFRMVMI*PWVLSWGTEYM
Trigger: CATATACTCGGTGCCCCACGACAGCACCCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TCACTGCAGATACCTTGCGGCCTCGCTCTAGGGAACTaGTGTCCATCTCACTGTCAGAACCATTACCACTGC +
Preference number: 6 (lower is better)
Translates to: SLQIPCGLALGN*CPSHCQNHYHC
Trigger: GCAGTGGTAATGGTTCTGACAGTGAGATGGACACAAGTTCCCTAGAGCGAGGCCGCAAGGTATCTGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp CAGGCTTACTCACTGCAGATACCTTGCGGCCTCGCTCTAGGGAACTaGTGTCCATCTCACTGTCAGAACCATTACCACTGCCATTGGACT +
Preference number: 6 (lower is better)
Translates to: QAYSLQIPCGLALGN*CPSHCQNHYHCHWT
Trigger: AGTCCAATGGCAGTGGTAATGGTTCTGACAGTGAGATGGACACAAGTTCCCTAGAGCGAGGCCGCAAGGTATCTGCAGTGAGTAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp CTGCCATTGGACTGGGCTTTGTTGATGTTCCGAATGGTAATGATCTaGCCCTGGGTGCTGTCGTGGGGCACCGAGTATATGTTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LPLDWALLMFRMVMI*PWVLSWGTEYMFSS
Trigger: GGAAGAAAACATATACTCGGTGCCCCACGACAGCACCCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGCCCAGTCCAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp CTTTCTCCTTCTCAGTGCCTGACAATCCCACCACACTaGTGTTGTAGGTGGGGATGCGGACATCTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LSPSQCLTIPPH*CCRWGCGHLAF
Trigger: GAAAGCAAGATGTCCGCATCCCCACCTACAACATCAGTGTGGTGGGATTGTCAGGCACTGAGAAGGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp AGTCCTGGTACTCAGGGGAGGCCTGCATCTTTCGGCTaGCACTCGGCCAGTTCTCATTGTGATTTTTCACAA +
Preference number: 6 (lower is better)
Translates to: SPGTQGRPASFG*HSASSHCDFSQ
Trigger: TTGTGAAAAATCACAATGAGAACTGGCCGAGTGTCAGCCGAAAGATGCAGGCCTCCCCTGAGTACCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp TTTCTCCGACGCTCAATATGCTCATGCTTGAGGCGGTaGATGTGCTGCAGGAAGAGCTTCTTGGCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: FLRRSICSCLRR*MCCRKSFLAFC
Trigger: ACAGAAGGCCAAGAAGCTCTTCCTGCAGCACATTCACCGCCTCAAGCATGAGCATATTGAGCGTCGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp TCGTCGGGTGGTACACAAAATGGATGTGCTTCAGAATaGGGGCATCACGCTCTGCTTGGAGCTTCTGCAATG +
Preference number: 6 (lower is better)
Translates to: SSGGTQNGCASE*GHHALLGASAM
Trigger: CATTGCAGAAGCTCCAAGCAGAGCGTGATGCCCTCATTCTGAAGCACATCCATTTTGTGTACCACCCGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp CGCTCTGCTTGGAGCTTCTGCAATGCTTTAAATCTCTaGTCTTCGCCCAGAACATCCTGGATGACACCCATC +
Preference number: 6 (lower is better)
Translates to: RSAWSFCNALNL*SSPRTSWMTPI
Trigger: GATGGGTGTCATCCAGGATGTTCTGGGCGAAGAGCAGAGATTTAAAGCATTGCAGAAGCTCCAAGCAGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp TGGAATGACAGCATTGTCCCCTTTATAACCTTGGGATaGCTGGTCCTCCTCTTTCTTTCGGATGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: WNDSIVPFITLG*LVLLFLSDGSQ
Trigger: CTGGGACCCATCCGAAAGAAAGAGGAGGACCAGGCATCCCAAGGTTATAAAGGGGACAATGCTGTCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CTCTCCCAGGTTGCCTTTGTGATGGATGGCCGGGGTTaGGGCTTTGGTTTCTTGGTGTTCCTTCTTAGACTT +
Preference number: 6 (lower is better)
Translates to: LSQVAFVMDGRG*GFGFLVFLLRL
Trigger: AAGTCTAAGAAGGAACACCAAGAAACCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCAACCTGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TGCGGCTCTCTTGATGTAGGGCTGCAGTGCCGTGCTTCGATGAGGTaGAAAAGTCTGATCGTCAATAAACTCAGTCTGCTCCACAATGTG +
Preference number: 6 (lower is better)
Translates to: CGSLDVGLQCRASMR*KSLIVNKLSLLHNV
Trigger: CACATTGTGGAGCAGACTGAGTTTATTGACGATCAGACTTTTCAACCTCATCGAAGCACGGCACTGCAGCCCTACATCAAGAGAGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp CAAGGTTTCCCAGGAGTTATGAAAGGAGAGGTCTCCAGGTTTTCTTaGAAAGCCCTTCGCATCTCAGCTCTCTTCCTCTCGTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: QGFPGVMKGEVSRFS*KALRISALFLSFLS
Trigger: GCTGAGGAACGAGAGGAAGAGAGCTGAGATGCGAAGGGCTTTCAAAGAAAACCTGGAGACCTCTCCTTTCATAACTCCTGGGAAACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp CGGATCAAGAAAGACACACTGAAGTTTGCTGGCAATCTGCTGACCTaGCTGTATCAAGCTGTGCAGAGTCTCTCCACTTGTGTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: RIKKDTLKFAGNLLT*LYQAVQSLSTCVPS
Trigger: AGAGGGGACACAAGTGGAGAGACTCTGCACAGCTTGATACAGCAAGGTCAGCAGATTGCCAGCAAACTTCAGTGTGTCTTTCTTGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TCCATCTCACTGTCAGAACCATTACCACTGCCATTGGACTGGGCTTaGTTGATGTTCCGAATGGTAATGATCTTGCCCTGGGTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: SISLSEPLPLPLDWA*LMFRMVMILPWVLS
Trigger: CGACAGCACCCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGCCCAGTCCAATGGCAGTGGTAATGGTTCTGACAGTGAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp CCGTCATTTCCCTCCAGTTCCATAGAGAACTTGGAATaGTCTTTGGACAGGGAGGGCAATGTCGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: PSFPSSSIENLE*SLDREGNVASS
Trigger: GGAAGATGCGACATTGCCCTCCCTGTCCAAAGATCATTCCAAGTTCTCTATGGAACTGGAGGGAAATGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp ATTGTAAAGGCAGAGACAGCCATGGGGTTGGAAGGTTaGTGTCTGGAAAGAGTTCACAGGAAGCCGGACATT +
Preference number: 6 (lower is better)
Translates to: IVKAETAMGLEG*CLERVHRKPDI
Trigger: AATGTCCGGCTTCCTGTGAACTCTTTCCAGACACCAACCTTCCAACCCCATGGCTGTCTCTGCCTTTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TGCACTAAGGTGCTGAAAGCCAAGTCCACATTCACATaGGACCTTGCAGAGGTCTCTACAACCTGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: CTKVLKAKSTFT*DLAEVSTTWRF
Trigger: GAACCTCCAGGTTGTAGAGACCTCTGCAAGGTCCAATGTGAATGTGGACTTGGCTTTCAGCACCTTAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CCAGGAGTTATGAAAGGAGAGGTCTCCAGGTTTTCTTaGAAAGCCCTTCGCATCTCAGCTCTCTTCCTCTCG +
Preference number: 6 (lower is better)
Translates to: PGVMKGEVSRFS*KALRISALFLS
Trigger: CGAGAGGAAGAGAGCTGAGATGCGAAGGGCTTTCAAAGAAAACCTGGAGACCTCTCCTTTCATAACTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp AATTGTAAAGGCAGAGACAGCCATGGGGTTGGAAGGTaGGTGTCTGGAAAGAGTTCACAGGAAGCCGGACAT +
Preference number: 6 (lower is better)
Translates to: NCKGRDSHGVGR*VSGKSSQEAGH
Trigger: ATGTCCGGCTTCCTGTGAACTCTTTCCAGACACCAACCTTCCAACCCCATGGCTGTCTCTGCCTTTACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TCCTCTCCCTCTGTTAGCTGCTCTCGACTTAAGTCATaGTCTAGGACATCTATAGCGCCATCAGTGAGTGCG +
Preference number: 6 (lower is better)
Translates to: SSPSVSCSRLKS*SRTSIAPSVSA
Trigger: CGCACTCACTGATGGCGCTATAGATGTCCTAGACAATGACTTAAGTCGAGAGCAGCTAACAGAGGGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp CTCTGCTCTTCTCTATACTCTCCACCACATAGGACAGTGACTCCTTaGAATTGTAAAGGCAGAGACAGCCATGGGGTTGGAAGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: LCSSLYSPPHRTVTP*NCKGRDSHGVGRLV
Trigger: CACCAACCTTCCAACCCCATGGCTGTCTCTGCCTTTACAATTCAAAGGAGTCACTGTCCTATGTGGTGGAGAGTATAGAGAAGAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TGTGCAATTTCCTCTCCCTCTGTTAGCTGCTCTCGACTTAAGTCATaGTCTAGGACATCTATAGCGCCATCAGTGAGTGCGACAAGCTGG +
Preference number: 6 (lower is better)
Translates to: CAISSPSVSCSRLKS*SRTSIAPSVSATSW
Trigger: CCAGCTTGTCGCACTCACTGATGGCGCTATAGATGTCCTAGACAATGACTTAAGTCGAGAGCAGCTAACAGAGGGAGAGGAAATTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp CAAGTTTATGCTGGGGCTGGCTACAAGGGATGCTTGTaGATCTCCCGTCAATCTCTTGTGCAATTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: QVYAGAGYKGCL*ISRQSLVQFPL
Trigger: GAGAGGAAATTGCACAAGAGATTGACGGGAGATTCACAAGCATCCCTTGTAGCCAGCCCCAGCATAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp TCCTCCTCCTGGGGTCCTCATCTGTTTCATATGGAATaGCAGCATTGTCCCCTTTATAACCTTGGGATGCCT +
Preference number: 6 (lower is better)
Translates to: SSSWGPHLFHME*QHCPLYNLGMP
Trigger: AGGCATCCCAAGGTTATAAAGGGGACAATGCTGTCATTCCATATGAAACAGATGAGGACCCCAGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp CTTCCTTCAGAGCATGCAGCTTCTGTTCCCTGTCGTTaGTTTTGTGAGCTTCCACCAAGTCAATCTGCATGC +
Preference number: 6 (lower is better)
Translates to: LPSEHAASVPCR*FCELPPSQSAC
Trigger: GCATGCAGATTGACTTGGTGGAAGCTCACAAAATCAACGACAGGGAACAGAAGCTGCATGCTCTGAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp AGCTTCCCATCTGGCATCTGTTTCTGCTCAAAGTCTTaGTCCAGTCCCAGCTGGTCAGTGCAAAAATACATG +
Preference number: 6 (lower is better)
Translates to: SFPSGICFCSKS*SSPSWSVQKYM
Trigger: CATGTATTTTTGCACTGACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAAACAGATGCCAGATGGGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp GGTGCTGAAAGCCAAGTCCACATTCACATTGGACCTTaGAGAGGTCTCTACAACCTGGAGGTTCTTTTTGCT +
Preference number: 6 (lower is better)
Translates to: GAESQVHIHIGP*RGLYNLEVLFA
Trigger: AGCAAAAAGAACCTCCAGGTTGTAGAGACCTCTGCAAGGTCCAATGTGAATGTGGACTTGGCTTTCAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp GTGTTCAATCTTAGCATCTACACAAGCTGGACAGCTTaGGCATGTCTCCTTCGTCGGGTGGTACACAAAATG +
Preference number: 6 (lower is better)
Translates to: VFNLSIYTSWTA*ACLLRRVVHKM
Trigger: CATTTTGTGTACCACCCGACGAAGGAGACATGCCCAAGCTGTCCAGCTTGTGTAGATGCTAAGATTGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp TTCCGAATGGTAATGATCTTGCCCTGGGTGCTGTCGTaGGGCACCGAGTATATGTTTTCTTCCTCATTCCTT +
Preference number: 6 (lower is better)
Translates to: FRMVMILPWVLS*GTEYMFSSSFL
Trigger: AAGGAATGAGGAAGAAAACATATACTCGGTGCCCCACGACAGCACCCAGGGCAAGATCATTACCATTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp GCTTTGTTGATGTTCCGAATGGTAATGATCTTGCCCTaGGTGCTGTCGTGGGGCACCGAGTATATGTTTTCT +
Preference number: 6 (lower is better)
Translates to: ALLMFRMVMILP*VLSWGTEYMFS
Trigger: AGAAAACATATACTCGGTGCCCCACGACAGCACCCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp AAAATAGTTACTCTCCCAGGTTGCCTTTGTGATGGATaGCCGGGGTTTGGGCTTTGGTTTCTTGGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: KIVTLPGCLCDG*PGFGLWFLGVP
Trigger: AGGAACACCAAGAAACCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCAACCTGGGAGAGTAACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CTTGATGTAGGGCTGCAGTGCCGTGCTTCGATGAGGTaGAAAAGTCTGATCGTCAATAAACTCAGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LDVGLQCRASMR*KSLIVNKLSLL
Trigger: GAGCAGACTGAGTTTATTGACGATCAGACTTTTCAACCTCATCGAAGCACGGCACTGCAGCCCTACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CAGCTTCCCATCTGGCATCTGTTTCTGCTCAAAGTCTaGCTCCAGTCCCAGCTGGTCAGTGCAAAAATACAT +
Preference number: 6 (lower is better)
Translates to: QLPIWHLFLLKV*LQSQLVSAKIH
Trigger: ATGTATTTTTGCACTGACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAAACAGATGCCAGATGGGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CTGTCAGAACCATTACCACTGCCATTGGACTGGGCTTaGTTGATGTTCCGAATGGTAATGATCTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LSEPLPLPLDWA*LMFRMVMILPW
Trigger: CCAGGGCAAGATCATTACCATTCGGAACATCAACAAAGCCCAGTCCAATGGCAGTGGTAATGGTTCTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp GTCAACCAGCAGCTTCCCATCTGGCATCTGTTTCTGCTCAAAGTCTaGCTCCAGTCCCAGCTGGTCAGTGCAAAAATACATGAGTTTTTC +
Preference number: 6 (lower is better)
Translates to: VNQQLPIWHLFLLKV*LQSQLVSAKIHEFF
Trigger: GAAAAACTCATGTATTTTTGCACTGACCAGCTGGGACTGGAGCAAGACTTTGAGCAGAAACAGATGCCAGATGGGAAGCTGCTGGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp GGGACAGTATCCATCAAGTCAAAGGGAATCCGCTCATTTTCCATGTaGTCAATGTGGCTGGTGGCATCCCATGGTGTTTCTTCAAGTACA +
Preference number: 6 (lower is better)
Translates to: GTVSIKSKGIRSFSM*SMWLVASHGVSSST
Trigger: TGTACTTGAAGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTCCCTTTGACTTGATGGATACTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp TCAGTGAGTGCGACAAGCTGGATGGGGATAATATCCTaGACTTCACAAAGAAAGGCACGTAACATTGCCAAG +
Preference number: 6 (lower is better)
Translates to: SVSATSWMGIIS*TSQRKARNIAK
Trigger: CTTGGCAATGTTACGTGCCTTTCTTTGTGAAGTGCAGGATATTATCCCCATCCAGCTTGTCGCACTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp AGGACATCTATAGCGCCATCAGTGAGTGCGACAAGCTaGATGGGGATAATATCCTGCACTTCACAAAGAAAG +
Preference number: 6 (lower is better)
Translates to: RTSIAPSVSATS*MGIISCTSQRK
Trigger: CTTTCTTTGTGAAGTGCAGGATATTATCCCCATCCAGCTTGTCGCACTCACTGATGGCGCTATAGATGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TCCATCAAGTCAAAGGGAATCCGCTCATTTTCCATGTaGTCAATGTGGCTGGTGGCATCCCATGGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SIKSKGIRSFSM*SMWLVASHGVS
Trigger: AGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTCCCTTTGACTTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp AAAGACACACTGAAGTTTGCTGGCAATCTGCTGACCTaGCTGTATCAAGCTGTGCAGAGTCTCTCCACTTGT +
Preference number: 6 (lower is better)
Translates to: KDTLKFAGNLLT*LYQAVQSLSTC
Trigger: ACAAGTGGAGAGACTCTGCACAGCTTGATACAGCAAGGTCAGCAGATTGCCAGCAAACTTCAGTGTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp GTGTCCATCTCACTGTCAGAACCATTACCACTGCCATaGGACTGGGCTTTGTTGATGTTCCGAATGGTAATG +
Preference number: 6 (lower is better)
Translates to: VSISLSEPLPLP*DWALLMFRMVM
Trigger: CATTACCATTCGGAACATCAACAAAGCCCAGTCCAATGGCAGTGGTAATGGTTCTGACAGTGAGATGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TTTGTGATGGATGGCCGGGGTTTGGGCTTTGGTTTCTaGGTGTTCCTTCTTAGACTTCGAAGGATATTCCTC +
Preference number: 6 (lower is better)
Translates to: FVMDGRGLGFGF*VFLLRLRRIFL
Trigger: GAGGAATATCCTTCGAAGTCTAAGAAGGAACACCAAGAAACCAAAGCCCAAACCCCGGCCATCCATCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TCAATGAGTTGCACTAAGGTGCTGAAAGCCAAGTCCACATTCACATaGGACCTTGCAGAGGTCTCTACAACCTGGAGGTTCTTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: SMSCTKVLKAKSTFT*DLAEVSTTWRFFLL
Trigger: AAGCAAAAAGAACCTCCAGGTTGTAGAGACCTCTGCAAGGTCCAATGTGAATGTGGACTTGGCTTTCAGCACCTTAGTGCAACTCATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp CACATCAGACACATGACAATTCGAAGGTCCACATCAGCCAAATCTTaGATACTTGCAGTGGAGCTAACCAGGTTTAAGTTGCGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: HIRHMTIRRSTSAKS*ILAVELTRFKLRLE
Trigger: CTCCAAGCGCAACTTAAACCTGGTTAGCTCCACTGCAAGTATCAAAGATTTGGCTGATGTGGACCTTCGAATTGTCATGTGTCTGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp GGTATGAAAGAACAGACAGCTCAATGCGCTTCTTGTGTAGTCCAATaGGAAGTTCAAGTAAAACAGAGTTGCTGCTCCCACAGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: GMKEQTAQCASCVVQ*EVQVKQSCCSHSGK
Trigger: CTTCCCACTGTGGGAGCAGCAACTCTGTTTTACTTGAACTTCCAATTGGACTACACAAGAAGCGCATTGAGCTGTCTGTTCTTTCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp GTCCTGTGGCTTCGATGTACTCAATGCATCTTTCAATaGAAATGGGTATCGGTTTCTCTGGAGTCACCACTG +
Preference number: 6 (lower is better)
Translates to: VLWLRCTQCIFQ*KWVSVSLESPL
Trigger: CAGTGGTGACTCCAGAGAAACCGATACCCATTTTCATTGAAAGATGCATTGAGTACATCGAAGCCACAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp GAATCCGCTCATTTTCCATGTTGTCAATGTGGCTGGTaGCATCCCATGGTGTTTCTTCAAGTACAACAAACC +
Preference number: 6 (lower is better)
Translates to: ESAHFPCCQCGW*HPMVFLQVQQT
Trigger: GGTTTGTTGTACTTGAAGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp TCAAAGGGAATCCGCTCATTTTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGTGTTTCTTCAAGTACA +
Preference number: 6 (lower is better)
Translates to: SKGIRSFSMLSM*LVASHGVSSST
Trigger: TGTACTTGAAGAAACACCATGGGATGCCACCAGCCACATTGACAACATGGAAAATGAGCGGATTCCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp TTCACATTGGACCTTGCAGAGGTCTCTACAACCTGGAGGTTCTTTTaGCTTAAGGCAAAAGTATGTGCATCTCTAATGTACCGCTCAACG +
Preference number: 6 (lower is better)
Translates to: FTLDLAEVSTTWRFF*LKAKVCASLMYRST
Trigger: CGTTGAGCGGTACATTAGAGATGCACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGTTGTAGAGACCTCTGCAAGGTCCAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS TCA 72 bp TTAACTAAAATTAAGGTCAAGGGAAGGTGGACTAAATaGTTATCCCGCCTGCCCAGTGTAGACTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LTKIKVKGRWTK*LSRLPSVDSLL
Trigger: GAGCAGAGAGTCTACACTGGGCAGGCGGGATAATCATTTAGTCCACCTTCCCTTGACCTTAATTTTAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TACTTGTCATCATTTGTACAAAGAGCTCGAATTTCATaGGCCAACTCTCGGGCAAGGCCATCTTTGCCTAAG +
Preference number: 6 (lower is better)
Translates to: YLSSFVQRARIS*ANSRARPSLPK
Trigger: CTTAGGCAAAGATGGCCTTGCCCGAGAGTTGGCCAATGAAATTCGAGCTCTTTGTACAAATGATGACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp GAGGTCAGACAGAGAGTTCTTCTGATTCCGATCAGATaGTCTGATAAAGCGAGAACTGATCAAGTGTTCAAT +
Preference number: 6 (lower is better)
Translates to: EVRQRVLLIPIR*SDKARTDQVFN
Trigger: ATTGAACACTTGATCAGTTCTCGCTTTATCAGACCATCTGATCGGAATCAGAAGAACTCTCTGTCTGACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp TTGTTCAGGTGGGAGATGACATATTTGAAGACTTCATaGTTTTCCTTCGGGAACTTCTTCAGCACTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LFRWEMTYLKTS*FSFGNFFSTSF
Trigger: GAAGGAAGTGCTGAAGAAGTTCCCGAAGGAAAACCATGAAGTCTTCAAATATGTCATCTCCCACCTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CCA 72 bp AGGTTCTCACTGGTCATAAGATTCACCTTGTTGTTGTaGCTGACTTTGTTCAGGTGGGAGATGACATATTTG +
Preference number: 6 (lower is better)
Translates to: RFSLVIRFTLLL*LTLFRWEMTYL
Trigger: CAAATATGTCATCTCCCACCTGAACAAAGTCAGCCACAACAACAAGGTGAATCTTATGACCAGTGAGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp GACCTTGCAGAGGTCTCTACAACCTGGAGGTTCTTTTaGCTTAAGGCAAAAGTATGTGCATCTCTAATGTAC +
Preference number: 6 (lower is better)
Translates to: DLAEVSTTWRFF*LKAKVCASLMY
Trigger: GTACATTAGAGATGCACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGTTGTAGAGACCTCTGCAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TTGGAACTCTTCCTTTGCTCGGTCTATAATCTGCTTTaGGTGCTTGCCATAGATGTCCATGTACACAGATTC +
Preference number: 6 (lower is better)
Translates to: LELFLCSVYNLL*VLAIDVHVHRF
Trigger: GAATCTGTGTACATGGACATCTATGGCAAGCACCAAAAGCAGATTATAGACCGAGCAAAGGAAGAGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CACATGACAATTCGAAGGTCCACATCAGCCAAATCTTaGATACTTGCAGTGGAGCTAACCAGGTTTAAGTTG +
Preference number: 6 (lower is better)
Translates to: HMTIRRSTSAKS*ILAVELTRFKL
Trigger: CAACTTAAACCTGGTTAGCTCCACTGCAAGTATCAAAGATTTGGCTGATGTGGACCTTCGAATTGTCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp GGGGGAGGTACTTTGTTGTTCAGTTTACTCTCAAAATaGCTCATTATGAAAGATAGCCCGTCATTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: GGGTLLFSLLSK*LIMKDSPSFPS
Trigger: GGAGGGAAATGACGGGCTATCTTTCATAATGAGCAATTTTGAGAGTAAACTGAACAACAAAGTACCTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp TGCACAGGAGGCTTTGGTTTGACTGGGGGAGGTACTTaGTTGTTCAGTTTACTCTCAAAATTGCTCATTATG +
Preference number: 6 (lower is better)
Translates to: CTGGFGLTGGGT*LFSLLSKLLIM
Trigger: CATAATGAGCAATTTTGAGAGTAAACTGAACAACAAAGTACCTCCCCCAGTCAAACCAAAGCCTCCTGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp GGTTTGACTGGGGGAGGTACTTTGTTGTTCAGTTTACTCTCAAAATaGCTCATTATGAAAGATAGCCCGTCATTTCCCTCCAGTTCCATA +
Preference number: 6 (lower is better)
Translates to: GLTGGGTLLFSLLSK*LIMKDSPSFPSSSI
Trigger: TATGGAACTGGAGGGAAATGACGGGCTATCTTTCATAATGAGCAATTTTGAGAGTAAACTGAACAACAAAGTACCTCCCCCAGTCAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS GCA 72 bp TCAATCTCTTGTGCAATTTCCTCTCCCTCTGTTAGCTaGTCTCGACTTAAGTCATTGTCTAGGACATCTATA +
Preference number: 6 (lower is better)
Translates to: SISCAISSPSVS*SRLKSLSRTSI
Trigger: TATAGATGTCCTAGACAATGACTTAAGTCGAGAGCAGCTAACAGAGGGAGAGGAAATTGCACAAGAGATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp GAGAAAGCTCATACATTTTACCATCTATTACATACTTGTCATCATTaGTACAAAGAGCTCGAATTTCATTGGCCAACTCTCGGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: EKAHTFYHLLHTCHH*YKELEFHWPTLGQG
Trigger: GCCTTGCCCGAGAGTTGGCCAATGAAATTCGAGCTCTTTGTACAAATGATGACAAGTATGTAATAGATGGTAAAATGTATGAGCTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp GAATGGTATGAAAGAACAGACAGCTCAATGCGCTTCTaGTGTAGTCCAATTGGAAGTTCAAGTAAAACAGAG +
Preference number: 6 (lower is better)
Translates to: EWYERTDSSMRF*CSPIGSSSKTE
Trigger: CTCTGTTTTACTTGAACTTCCAATTGGACTACACAAGAAGCGCATTGAGCTGTCTGTTCTTTCATACCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 90 bp ATTGGCCTCAGAGAAAGCTCATACATTTTACCATCTATTACATACTaGTCATCATTTGTACAAAGAGCTCGAATTTCATTGGCCAACTCT +
Preference number: 6 (lower is better)
Translates to: IGLRESSYILPSITY*SSFVQRARISLANS
Trigger: AGAGTTGGCCAATGAAATTCGAGCTCTTTGTACAAATGATGACAAGTATGTAATAGATGGTAAAATGTATGAGCTTTCTCTGAGGCCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2
CDS CAA 72 bp CATACATTTTACCATCTATTACATACTTGTCATCATTaGTACAAAGAGCTCGAATTTCATTGGCCAACTCTC +
Preference number: 6 (lower is better)
Translates to: HTFYHLLHTCHH*YKELEFHWPTL
Trigger: GAGAGTTGGCCAATGAAATTCGAGCTCTTTGTACAAATGATGACAAGTATGTAATAGATGGTAAAATGTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075845.11
ENSMUST00000171937.2