RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP32 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041444

Ensembl transcript IDs: ENSMUST00000168954.9, ENSMUST00000174641.8, ENSMUST00000182310.2, ENSMUST00000182802.8, ENSMUST00000183121.2

Found 965 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGAGAGTCCACCTGGGCAGGCTACACGGCCCTGGACAGGGGAGTaGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGC +
Preference number: 1 (lower is better)
Translates to: VESPPGQATRPWTGE*EHNKKCGSPPGNRG
Trigger: GCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTGTCCAGGGCCGTGTAGCCTGCCCAGGTGGACTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 90 bp CTAAACACAGGACTGCCTGACCAGTCTCCACTGTCTAGGGTGAGATaGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTGCCACATC +
Preference number: 1 (lower is better)
Translates to: LNTGLPDQSPLSRVR*AEKTRGKLGQRCHI
Trigger: GATGTGGCACCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGGAGACTGGTCAGGCAGTCCTGTGTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 90 bp GAGTGGATTGCCAGGGGCACCCAGACCATACAGGAAACTCCTCAGTaGTGGGCAGAAGGGACAGAGCTCCACCAGGCTCTCAAAAATGAT +
Preference number: 1 (lower is better)
Translates to: EWIARGTQTIQETPQ*WAEGTELHQALKND
Trigger: ATCATTTTTGAGAGCCTGGTGGAGCTCTGTCCCTTCTGCCCAGCACTGAGGAGTTTCCTGTATGGTCTGGGTGCCCCTGGCAATCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 90 bp TGGATTGCCAGGGGCACCCAGACCATACAGGAAACTCCTCAGTGCTaGGCAGAAGGGACAGAGCTCCACCAGGCTCTCAAAAATGATTTG +
Preference number: 1 (lower is better)
Translates to: WIARGTQTIQETPQC*AEGTELHQALKNDL
Trigger: CAAATCATTTTTGAGAGCCTGGTGGAGCTCTGTCCCTTCTGCCCAGCACTGAGGAGTTTCCTGTATGGTCTGGGTGCCCCTGGCAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 90 bp ACACACGAGGCGGACGACACTGAGGTAACCTGGCTCACAGTGATTTaGCATCCGATTTCTGCCCCCACAGAATTAGAGAAACATGTGGGC +
Preference number: 1 (lower is better)
Translates to: THEADDTEVTWLTVI*HPISAPTELEKHVG
Trigger: GCCCACATGTTTCTCTAATTCTGTGGGGGCAGAAATCGGATGGCAAATCACTGTGAGCCAGGTTACCTCAGTGTCGTCCGCCTCGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 90 bp ACAGCAAGCCACTTCACTGAAAGCCTGCTTCCACTGGGTGTGCCATaGCCAGCTTTGCCACAGGGAACTGAGTCTAGAAGGCTGGTTATT +
Preference number: 1 (lower is better)
Translates to: TASHFTESLLPLGVP*PALPQGTESRRLVI
Trigger: AATAACCAGCCTTCTAGACTCAGTTCCCTGTGGCAAAGCTGGGCATGGCACACCCAGTGGAAGCAGGCTTTCAGTGAAGTGGCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 90 bp ATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTaGAGAGTCCACCTGGGCAGGCTACACGGCCCTGGACAGGGGAGT +
Preference number: 1 (lower is better)
Translates to: ILDSFVERDNESRKE*RVHLGRLHGPGQGS
Trigger: ACTCCCCTGTCCAGGGCCGTGTAGCCTGCCCAGGTGGACTCTCCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 90 bp CAGTTAGACAACTGCATGACTCACATCTACAGCAAGCCACTTCACTaGAAGCCTGCTTCCACTGGGTGTGCCATGCCCAGCTTTGCCACA +
Preference number: 1 (lower is better)
Translates to: QLDNCMTHIYSKPLH*KPASTGCAMPSFAT
Trigger: TGTGGCAAAGCTGGGCATGGCACACCCAGTGGAAGCAGGCTTTCAGTGAAGTGGCTTGCTGTAGATGTGAGTCATGCAGTTGTCTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 90 bp CCCCCTTTGGAGGATTCTTTGAAGCCAGTTGAGTTTCCTGAGGACTaGATTCTGGGTACCAGGCAGCAGAAGACAGCAGATCCGTTAGAG +
Preference number: 1 (lower is better)
Translates to: PPLEDSLKPVEFPED*ILGTRQQKTADPLE
Trigger: CTCTAACGGATCTGCTGTCTTCTGCTGCCTGGTACCCAGAATGCAGTCCTCAGGAAACTCAACTGGCTTCAAAGAATCCTCCAAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 90 bp TGTGTTTGTGAGGTCACACACGAGGCGGACGACACTGAGGTAACCTaGCTCACAGTGATTTGCCATCCGATTTCTGCCCCCACAGAATTA +
Preference number: 1 (lower is better)
Translates to: CVCEVTHEADDTEVT*LTVICHPISAPTEL
Trigger: TAATTCTGTGGGGGCAGAAATCGGATGGCAAATCACTGTGAGCCAGGTTACCTCAGTGTCGTCCGCCTCGTGTGTGACCTCACAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 90 bp TTTGCTGTCAGGTCTGACAAGCTTGACCCCTGGAATTCCCAAGACTaGAGCAAAGAACTGACCTCCTCTATACCTGTGATGCGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: FAVRSDKLDPWNSQD*SKELTSSIPVMRCG
Trigger: ACCACAGCGCATCACAGGTATAGAGGAGGTCAGTTCTTTGCTTCAGTCTTGGGAATTCCAGGGGTCAAGCTTGTCAGACCTGACAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 90 bp GAGCTTACAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTaGATCTTCCTGCCTCCTCCCTCCGTGAGGATTACAGGAACTCCC +
Preference number: 1 (lower is better)
Translates to: ELTILVRLVNQAMPL*IFLPPPSVRITGTP
Trigger: GGGAGTTCCTGTAATCCTCACGGAGGGAGGAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTGTAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 90 bp CCAATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTaGATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: PIGLEQRNGLYRNLL*IHCCFQTDNRLSCS
Trigger: AGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 90 bp TCAGAGGTCAGTGATAGGTGCTTTCTTGGGTCACTCTCCACCTTTTaGGACATTCTCACTGAACCTGGGACTCAACTGTTTAGTCGGGCT +
Preference number: 1 (lower is better)
Translates to: SEVSDRCFLGSLSTF*DILTEPGTQLFSRA
Trigger: AGCCCGACTAAACAGTTGAGTCCCAGGTTCAGTGAGAATGTCTCAAAAGGTGGAGAGTGACCCAAGAAAGCACCTATCACTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATaGAACTTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACG +
Preference number: 1 (lower is better)
Translates to: REAGPEVPHPKPSKE*NFQNKVLGIHMFNT
Trigger: CGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 90 bp GTGTGCCATGCCCAGCTTTGCCACAGGGAACTGAGTCTAGAAGGCTaGTTATTTTCTGGCTACTTCACTCTGAAAACAGGATGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: VCHAQLCHRELSLEG*LFSGYFTLKTGCLR
Trigger: TCTCAGACATCCTGTTTTCAGAGTGAAGTAGCCAGAAAATAACCAGCCTTCTAGACTCAGTTCCCTGTGGCAAAGCTGGGCATGGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 90 bp ACGTCTAGAGAGTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTaGCAAATGCAGCAAGCCTGTGACCGCACAATGAGGGGAGCCAAA +
Preference number: 1 (lower is better)
Translates to: TSRELERTILKCWCR*QMQQACDRTMRGAK
Trigger: TTTGGCTCCCCTCATTGTGCGGTCACAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAACTCTCTAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 90 bp CCAGCTTTGCCACAGGGAACTGAGTCTAGAAGGCTGGTTATTTTCTaGCTACTTCACTCTGAAAACAGGATGTCTGAGATGTGTTGTAAG +
Preference number: 1 (lower is better)
Translates to: PALPQGTESRRLVIF*LLHSENRMSEMCCK
Trigger: CTTACAACACATCTCAGACATCCTGTTTTCAGAGTGAAGTAGCCAGAAAATAACCAGCCTTCTAGACTCAGTTCCCTGTGGCAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 90 bp TTGCCCAGCAATCCACAAACTCATTCTGTCTTGTGTTATGACTGGTaGGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAG +
Preference number: 1 (lower is better)
Translates to: LPSNPQTHSVLCYDW*AYEQWIQKWSTTTQ
Trigger: CTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGTCATAACACAAGACAGAATGAGTTTGTGGATTGCTGGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 90 bp GGAGCAAACACTACGTGTGACAAACTAATCCACAAATATCAAAATTaGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTT +
Preference number: 1 (lower is better)
Translates to: GANTTCDKLIHKYQN*PGPCSTSLQARPEV
Trigger: AACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGATATTTGTGGATTAGTTTGTCACACGTAGTGTTTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 90 bp AAGCTCTTGAATTTCAGGATTATACCACCACTTGGCTCTTCCTTTTaGATTGCATCTGTGTGTGTGTGTACGCATATATGCCTGTCTATG +
Preference number: 1 (lower is better)
Translates to: KLLNFRIIPPLGSSF*IASVCVCTHICLSM
Trigger: CATAGACAGGCATATATGCGTACACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTGAAATTCAAGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 90 bp CAGGTCTGCACTTTTAATGCAGATGCCCAAGTTCTCATAGACCTTTaGATGTATTGGTGTTTCCAGATATCTGCTTTGGACTTCATTGTT +
Preference number: 1 (lower is better)
Translates to: QVCTFNADAQVLIDL*MYWCFQISALDFIV
Trigger: AACAATGAAGTCCAAAGCAGATATCTGGAAACACCAATACATGCAAAGGTCTATGAGAACTTGGGCATCTGCATTAAAAGTGCAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 90 bp CCTAGACTGCTATCTAGGAACATCTACTTCAATCTAACCAAACCGTaGAATTTCGCCCAAAAGCTAAAATCTGGAGACATGGCTGAAAAA +
Preference number: 1 (lower is better)
Translates to: PRLLSRNIYFNLTKP*NFAQKLKSGDMAEK
Trigger: TTTTTCAGCCATGTCTCCAGATTTTAGCTTTTGGGCGAAATTCCACGGTTTGGTTAGATTGAAGTAGATGTTCCTAGATAGCAGTCTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 90 bp CCAAGTTCTCATAGACCTTTGCATGTATTGGTGTTTCCAGATATCTaGTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAAA +
Preference number: 1 (lower is better)
Translates to: PSSHRPLHVLVFPDI*FGLHCYSLVNLGNK
Trigger: TTTATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAAACACCAATACATGCAAAGGTCTATGAGAACTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 90 bp GTAATTAGCAGCACAGTAAACTACCTTTTTATAGAGCAACACAAATaGCTACAAATTCAAACACTGACACTGCAATTTACCATCAAGTCC +
Preference number: 1 (lower is better)
Translates to: VISSTVNYLFIEQHK*LQIQTLTLQFTIKS
Trigger: GGACTTGATGGTAAATTGCAGTGTCAGTGTTTGAATTTGTAGTCATTTGTGTTGCTCTATAAAAAGGTAGTTTACTGTGCTGCTAATTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACAAACCAGAGGGAAGCTaGGCCAGAGGTGCCACATCC +
Preference number: 2 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHKPEGS*ARGATS
Trigger: GGATGTGGCACCTCTGGCCCAGCTTCCCTCTGGTTT...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 90 bp CTTCATTTGGAGCAGGGTTGTTCCAGCATACACAGCATGAGTGGATaGCCAGGGGCACCCAGACCATACAGGAAACTCCTCAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: LHLEQGCSSIHSMSG*PGAPRPYRKLLSAG
Trigger: CCCAGCACTGAGGAGTTTCCTGTATGGTCTGGGTGCCCCTGGCAATCCACTCATGCTGTGTATGCTGGAACAACCCTGCTCCAAATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGAATGCAGCAAGCCTGTaGCCGCACAATGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: TFSEFTAASKLTTGSPALNAASL*PHNEGS
Trigger: GCTCCCCTCATTGTGCGGTCACAGGCTTGCTGCATT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGAAGCTGGGCCAGAGGTaGCACATCCCAAACCCAGTA +
Preference number: 2 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMKLGQR*HIPNPV
Trigger: TACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTT...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGCCTGGAGCTTCTAGCTaGGCTCCTAGACTGCTATCT +
Preference number: 2 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMPGASS*APRLLS
Trigger: AGATAGCAGTCTAGGAGCTCAGCTAGAAGCTCCAGG...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGGAAAGCAGAAAAGAGTaGAGAGTCCACCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMESRKE*RVHLGR
Trigger: CCTGCCCAGGTGGACTCTCCACTCTTTTCTGCTTTC...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 90 bp CACTTCACTGAAAGCCTGCTTCCACTGGGTGTGCCATGCCCAGCTTaGCCACAGGGAACTGAGTCTAGAAGGCTGGTTATTTTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: HFTESLLPLGVPCPA*PQGTESRRLVIFWL
Trigger: TAGCCAGAAAATAACCAGCCTTCTAGACTCAGTTCCCTGTGGCAAAGCTGGGCATGGCACACCCAGTGGAAGCAGGCTTTCAGTGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGTCCACGTCCCTCCTCTaGACAGAATTAGTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMSTSLL*TELVLG
Trigger: TCCCAAGACTAATTCTGTGCAGAGGAGGGACGTGGA...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGCAGGCTACACGGCCCTaGACAGGGGAGTGGGAACAC +
Preference number: 2 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLQATRP*TGEWEH
Trigger: GTGTTCCCACTCCCCTGTCCAGGGCCGTGTAGCCTG...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 90 bp AGTCTCCAACCACATGGCACCCTCACATTCCAAACTTCCTCCCACTaGGCCCCATCTCTTCAAGACTTCATTCACCACCACTCAATAGTG +
Preference number: 2 (lower is better)
Translates to: SLQPHGTLTFQTSSH*APSLQDFIHHHSIV
Trigger: CACTATTGAGTGGTGGTGAATGAAGTCTTGAAGAGATGGGGCCAAGTGGGAGGAAGTTTGGAATGTGAGGGTGCCATGTGGTTGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGAACACAACAAGAAATaGGGAAGCCCACCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: REAGPEVPHPKPSKECNFEHNKK*GSPPGN
Trigger: ATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGAAATGTGCAGGCCCTaGCCTTGGAACTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLEMCRP*PWNCLR
Trigger: CCTGAGACAGTTCCAAGGGCAGGGCCTGCACATTTC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGGGAAAAGACCCTCTGTaGACACCAACATTATCTTGC +
Preference number: 2 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMGKDPL*TPTLSC
Trigger: GCAAGATAATGTTGGTGTGCACAGAGGGTCTTTTCC...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCAGGAAACTCCTCAGTaGTGGGCAGAAGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCQETPQ*WAEGTE
Trigger: CTCTGTCCCTTCTGCCCAGCACTGAGGAGTTTCCTG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGTGAAGTGCCACAGCTaGCGACTAAAGCCCTTTGCC +
Preference number: 2 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLVKCHS*RLKPFA
Trigger: GGCAAAGGGCTTTAGTCGCCAGCTGTGGCACTTCAC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 90 bp CATAGGATGCTCCTCCTTTTAGTGGCTGTGTGGCGTTTCACTGTTTaGGTGAACTCTGGCCCATTTGTCACTTGCTCTCCAACTATGCCT +
Preference number: 2 (lower is better)
Translates to: HRMLLLLVAVWRFTV*VNSGPFVTCSPTMP
Trigger: AGGCATAGTTGGAGAGCAAGTGACAAATGGGCCAGAGTTCACCAAAACAGTGAAACGCCACACAGCCACTAAAAGGAGGAGCATCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGGGAGGGGAAGGTGGTaGTTTGCTTTTATTATACTT +
Preference number: 2 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAGRGRW*FAFIIL
Trigger: AAGTATAATAAAAGCAAATCACCACCTTCCCCTCCC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCCC +
Preference number: 2 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLLSSRG*FNSIAP
Trigger: GGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTGCAGGCCCTGCCCTTaGAACTGTCTCAGGGACTTC +
Preference number: 2 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLCRPCP*NCLRDF
Trigger: GAAGTCCCTGAGACAGTTCCAAGGGCAGGGCCTGCA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTCTTGTTGTGGGCCATaGAGGCTGGTAGCACACTGG +
Preference number: 2 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLSCCGP*RLVAHW
Trigger: CCAGTGTGCTACCAGCCTGCATGGCCCACAACAAGA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTTCTTGTTGTGGGCCATaGAGGCTGGTAGCACACTGG +
Preference number: 2 (lower is better)
Translates to: LSFLKENTVDDSVLALKCSCCGP*RLVAHW
Trigger: CCAGTGTGCTACCAGCCTGCATGGCCCACAACAAGA...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCACTTTCTTGCACTCTCTaGTCAGGTGACACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSLSCTL*SGDTLP
Trigger: TGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAG...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAAAACCAGAGGGAAGCTaGGCCAGAGGTGCCACATCC +
Preference number: 2 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLKPEGS*ARGATS
Trigger: GGATGTGGCACCTCTGGCCCAGCTTCCCTCTGGTTT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 90 bp TCTGTTGACCTTTTTCCATGGAAACACTACTCAGGTCTGCTTCATTaGGAGCAGGGTTGTTCCAGCATACACAGCATGAGTGGATTGCCA +
Preference number: 2 (lower is better)
Translates to: SVDLFPWKHYSGLLH*EQGCSSIHSMSGLP
Trigger: TGGCAATCCACTCATGCTGTGTATGCTGGAACAACCCTGCTCCAAATGAAGCAGACCTGAGTAGTGTTTCCATGGAAAAAGGTCAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 90 bp AGAACATGCAGTGTGAGCGTCCAGCCTGTCTTTCTGTCATCTCTGTaGACCTTTTTCCATGGAAACACTACTCAGGTCTGCTTCATTTGG +
Preference number: 2 (lower is better)
Translates to: RTCSVSVQPVFLSSL*TFFHGNTTQVCFIW
Trigger: CCAAATGAAGCAGACCTGAGTAGTGTTTCCATGGAAAAAGGTCAACAGAGATGACAGAAAGACAGGCTGGACGCTCACACTGCATGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCGTAACACACAGTACTaGCGATCACATGCCTCTAAC +
Preference number: 2 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCRNTQY*RSHASN
Trigger: GTTAGAGGCATGTGATCGTCAGTACTGTGTGTTACG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCACAAATATCAAAATTaGCCTGGACCTTGTAGCACT +
Preference number: 2 (lower is better)
Translates to: TFSEFTAASKLTTGSPALHKYQN*PGPCST
Trigger: AGTGCTACAAGGTCCAGGCCAATTTTGATATTTGTG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 90 bp GTAAGGCAGTTCCACTTCCATGACCATAACGCTCCATGCCAACACTaGAAAATAACATTCAGTTCCTGTGTTTGTGAGGTCACACACGAG +
Preference number: 2 (lower is better)
Translates to: VRQFHFHDHNAPCQH*KITFSSCVCEVTHE
Trigger: CTCGTGTGTGACCTCACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTCATGGAAGTGGAACTGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 90 bp ATGCCTTTTAAGGAGGCACGTGTAACTCAGTCCTTACCGAAACTGTaGGTAGCTACTACACATTACTATTCCCATCTAGACATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: MPFKEARVTQSLPKL*VATTHYYSHLDMGL
Trigger: CAGCCCCATGTCTAGATGGGAATAGTAATGTGTAGTAGCTACCAACAGTTTCGGTAAGGACTGAGTTACACGTGCCTCCTTAAAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCAGACGGACTGTGTACTaGGGAACAACGAACAATGTA +
Preference number: 2 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLRRTVY*GTTNNV
Trigger: TACATTGTTCGTTGTTCCTCAGTACACAGTCCGTCT...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGAAATGCTGGTGTCGGTaGCAAATGCAGCAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLKCWCR*QMQQAC
Trigger: ACAGGCTTGCTGCATTTGTCACCGACACCAGCATTT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCATGGGATTGTGTGGGTaGAGAAGTCTGTTAGTCTCA +
Preference number: 2 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLMGLCG*RSLLVS
Trigger: TGAGACTAACAGACTTCTTCACCCACACAATCCCAT...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGTTAAAGGCAGTCCTTaGGGTCCTAGAGATCAGCCC +
Preference number: 2 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCVKGSP*GPRDQP
Trigger: GGGCTGATCTCTAGGACCCCAAGGACTGCCTTTAAC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGGGAGGGGAAGGTGGTaGTTTGCTTTTATTATACTT +
Preference number: 2 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVGRGRW*FAFIIL
Trigger: AAGTATAATAAAAGCAAATCACCACCTTCCCCTCCC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGTTAAAGGCAGTCCTTaGGGTCCTAGAGATCAGCCC +
Preference number: 2 (lower is better)
Translates to: FRILDSFVERDNESRKEWVKGSP*GPRDQP
Trigger: GGGCTGATCTCTAGGACCCCAAGGACTGCCTTTAAC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGTTGACCTTTTTCCATaGAAACACTACTCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLVDLFP*KHYSGL
Trigger: CAGACCTGAGTAGTGTTTCCATGGAAAAAGGTCAAC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGAGACGGACTGTGTACTaGGGAACAACGAACAATGTA +
Preference number: 2 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLRRTVY*GTTNNV
Trigger: TACATTGTTCGTTGTTCCTCAGTACACAGTCCGTCT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCGACCATAACGCTCCATaGCAACACTTGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCDHNAP*QHLKIT
Trigger: TGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGACCTTTGCATGTATTaGTGTTTCCAGATATCTGCT +
Preference number: 2 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVDLCMY*CFQISA
Trigger: AGCAGATATCTGGAAACACCAATACATGCAAAGGTC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAGGGAAGGTGGTGATTTaGTTTTATTATACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSGKVVI*FYYTSF
Trigger: GAAAGAAGTATAATAAAAGCAAATCACCACCTTCCC...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 90 bp CAAGCTCTTGAATTTCAGGATTATACCACCACTTGGCTCTTCCTTTaGAATTGCATCTGTGTGTGTGTGTACGCATATATGCCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: QALEFQDYTTTWLFL*NCICVCVYAYMPVY
Trigger: ATAGACAGGCATATATGCGTACACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTGAAATTCAAGAGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGAACACAACAAGAAATaGGGAAGCCCACCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: FQISALDFIVTLWSIWEIEHNKK*GSPPGN
Trigger: ATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGACCTTTGCATGTATTaGTGTTTCCAGATATCTGCT +
Preference number: 2 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCDLCMY*CFQISA
Trigger: AGCAGATATCTGGAAACACCAATACATGCAAAGGTC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTTCAAAACAAAGTCCTaGGCATTCACATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLFKTKS*AFTCLT
Trigger: TGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR GCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGGGAAGGTGGTGATTTaGTTTTATTATACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: FQISALDFIVTLWSIWEIGKVVI*FYYTSF
Trigger: GAAAGAAGTATAATAAAAGCAAATCACCACCTTCCC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp GCCAGGGGCACCCAGACCATACAGGAAACTCCTCAGTaGTGGGCAGAAGGGACAGAGCTCCACCAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: ARGTQTIQETPQ*WAEGTELHQAL
Trigger: GAGAGCCTGGTGGAGCTCTGTCCCTTCTGCCCAGCACTGAGGAGTTTCCTGTATGGTCTGGGTGCCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp GGACTGCCTGACCAGTCTCCACTGTCTAGGGTGAGATaGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: GLPDQSPLSRVR*AEKTRGKLGQR
Trigger: CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGGAGACTGGTCAGGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 72 bp ACACAGGACTGCCTGACCAGTCTCCACTGTCTAGGGTaGGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: TQDCLTSLHCLG*DGPRKPEGSWA
Trigger: GGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGGAGACTGGTCAGGCAGTCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp CTGCCTCCTCCCTCCGTGAGGATTACAGGAACTCCCTaGATGCACAGCTTTTTACACGGGTGCTGGGGATGC +
Preference number: 3 (lower is better)
Translates to: LPPPSVRITGTP*MHSFLHGCWGC
Trigger: GCATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTCACGGAGGGAGGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp GGGATAATGAAAGCAGAAAAGAGTGGAGAGTCCACCTaGGCAGGCTACACGGCCCTGGACAGGGGAGTGGGA +
Preference number: 3 (lower is better)
Translates to: GIMKAEKSGEST*AGYTALDRGVG
Trigger: TCCCACTCCCCTGTCCAGGGCCGTGTAGCCTGCCCAGGTGGACTCTCCACTCTTTTCTGCTTTCATTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 72 bp GAGGTCACACACGAGGCGGACGACACTGAGGTAACCTaGCTCACAGTGATTTGCCATCCGATTTCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: EVTHEADDTEVT*LTVICHPISAP
Trigger: GGGGGCAGAAATCGGATGGCAAATCACTGTGAGCCAGGTTACCTCAGTGTCGTCCGCCTCGTGTGTGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 72 bp AGGGGCACCCAGACCATACAGGAAACTCCTCAGTGCTaGGCAGAAGGGACAGAGCTCCACCAGGCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: RGTQTIQETPQC*AEGTELHQALK
Trigger: TTTGAGAGCCTGGTGGAGCTCTGTCCCTTCTGCCCAGCACTGAGGAGTTTCCTGTATGGTCTGGGTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACGCTCTCAAAAATGATTaGAACTTACAGCCCACAGGA +
Preference number: 3 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHALKND*NLQPTG
Trigger: TCCTGTGGGCTGTAAGTTCAAATCATTTTTGAGAGC...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp CGGCCCTGGACAGGGGAGTGGGAACACAACAAGAAATaGGGAAGCCCACCAGGAAATAGAGGCAAACTGCTC +
Preference number: 3 (lower is better)
Translates to: RPWTGEWEHNKK*GSPPGNRGKLL
Trigger: GAGCAGTTTGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTGTCCAGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp ATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTaGTCTGCTCACCTTCCACGTCCCTCCTCTGCACAG +
Preference number: 3 (lower is better)
Translates to: IHCCFQTDNRLS*SAHLPRPSSAQ
Trigger: CTGTGCAGAGGAGGGACGTGGAAGGTGAGCAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp TGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTaGCACATCCCAAACCCAGTAAGGAATGCAACTTTC +
Preference number: 3 (lower is better)
Translates to: WAEKTRGKLGQR*HIPNPVRNATF
Trigger: GAAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp CACTTCACTGAAAGCCTGCTTCCACTGGGTGTGCCATaGCCAGCTTTGCCACAGGGAACTGAGTCTAGAAGG +
Preference number: 3 (lower is better)
Translates to: HFTESLLPLGVP*PALPQGTESRR
Trigger: CCTTCTAGACTCAGTTCCCTGTGGCAAAGCTGGGCATGGCACACCCAGTGGAAGCAGGCTTTCAGTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp AACTGCATGACTCACATCTACAGCAAGCCACTTCACTaGAAGCCTGCTTCCACTGGGTGTGCCATGCCCAGC +
Preference number: 3 (lower is better)
Translates to: NCMTHIYSKPLH*KPASTGCAMPS
Trigger: GCTGGGCATGGCACACCCAGTGGAAGCAGGCTTTCAGTGAAGTGGCTTGCTGTAGATGTGAGTCATGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp GGGGCCTCGGGTTTGTGCAGCCAGCACTTCACCCATTaGGCACAGCACAGCACAGCAGTCTCTTTCTTTTAT +
Preference number: 3 (lower is better)
Translates to: GASGLCSQHFTH*AQHSTAVSFFY
Trigger: ATAAAAGAAAGAGACTGCTGTGCTGTGCTGTGCTCAATGGGTGAAGTGCTGGCTGCACAAACCCGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAGTGCAGGCCCTGCCCTaGGAACTGTCTCAGGGACTT +
Preference number: 3 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSVQALP*ELSQGL
Trigger: AAGTCCCTGAGACAGTTCCAAGGGCAGGGCCTGCAC...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp AAAGCCTGCTTCCACTGGGTGTGCCATGCCCAGCTTTaGCACAGGGAACTGAGTCTAGAAGGCTGGTTATTT +
Preference number: 3 (lower is better)
Translates to: KACFHWVCHAQL*HRELSLEGWLF
Trigger: AAATAACCAGCCTTCTAGACTCAGTTCCCTGTGGCAAAGCTGGGCATGGCACACCCAGTGGAAGCAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGTGGCGTTTCACTGTTTaGGTGAACTCTGGCCCATTT +
Preference number: 3 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMWRFTV*VNSGPF
Trigger: AAATGGGCCAGAGTTCACCAAAACAGTGAAACGCCA...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp GCGGACGACACTGAGGTAACCTGGCTCACAGTGATTTaGCATCCGATTTCTGCCCCCACAGAATTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: ADDTEVTWLTVI*HPISAPTELEK
Trigger: TTTCTCTAATTCTGTGGGGGCAGAAATCGGATGGCAAATCACTGTGAGCCAGGTTACCTCAGTGTCGTCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 72 bp CACATGGCACCCTCACATTCCAAACTTCCTCCCACTTaGCCCCATCTCTTCAAGACTTCATTCACCACCACT +
Preference number: 3 (lower is better)
Translates to: HMAPSHSKLPPT*PHLFKTSFTTT
Trigger: AGTGGTGGTGAATGAAGTCTTGAAGAGATGGGGCCAAGTGGGAGGAAGTTTGGAATGTGAGGGTGCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp GGCTGTAGCACCATAGTACACCATGATGGGATTGTGTaGGTGAAGAAGTCTGTTAGTCTCACTGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: GCSTIVHHDGIV*VKKSVSLTGGQ
Trigger: CTGGCCACCAGTGAGACTAACAGACTTCTTCACCCACACAATCCCATCATGGTGTACTATGGTGCTACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp CCCCCAGAATGCCAGTGGATGAGACGGACTGTGTACTaGGGAACAACGAACAATGTACAGTTGCCTAACAGA +
Preference number: 3 (lower is better)
Translates to: PPECQWMRRTVY*GTTNNVQLPNR
Trigger: TCTGTTAGGCAACTGTACATTGTTCGTTGTTCCTCAGTACACAGTCCGTCTCATCCACTGGCATTCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 72 bp GGCAGAAGGGACAGAGCTCCACCAGGCTCTCAAAAATaGTTTGAACTTACAGCCCACAGGAGAAGACTCATC +
Preference number: 3 (lower is better)
Translates to: GRRDRAPPGSQK*FELTAHRRRLI
Trigger: GATGAGTCTTCTCCTGTGGGCTGTAAGTTCAAATCATTTTTGAGAGCCTGGTGGAGCTCTGTCCCTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp GAGGATTCTTTGAAGCCAGTTGAGTTTCCTGAGGACTaGATTCTGGGTACCAGGCAGCAGAAGACAGCAGAT +
Preference number: 3 (lower is better)
Translates to: EDSLKPVEFPED*ILGTRQQKTAD
Trigger: ATCTGCTGTCTTCTGCTGCCTGGTACCCAGAATGCAGTCCTCAGGAAACTCAACTGGCTTCAAAGAATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp AAGGGACAGAGCTCCACCAGGCTCTCAAAAATGATTTaGACTTACAGCCCACAGGAGAAGACTCATCTCTGG +
Preference number: 3 (lower is better)
Translates to: KGQSSTRLSKMI*TYSPQEKTHLW
Trigger: CCAGAGATGAGTCTTCTCCTGTGGGCTGTAAGTTCAAATCATTTTTGAGAGCCTGGTGGAGCTCTGTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp AGGTCTGACAAGCTTGACCCCTGGAATTCCCAAGACTaGAGCAAAGAACTGACCTCCTCTATACCTGTGATG +
Preference number: 3 (lower is better)
Translates to: RSDKLDPWNSQD*SKELTSSIPVM
Trigger: CATCACAGGTATAGAGGAGGTCAGTTCTTTGCTTCAGTCTTGGGAATTCCAGGGGTCAAGCTTGTCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp ATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTaGATCTTCCTGCCTCCTCCCTCCGTGAGGATTACA +
Preference number: 3 (lower is better)
Translates to: ILVRLVNQAMPL*IFLPPPSVRIT
Trigger: TGTAATCCTCACGGAGGGAGGAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp TTCATTCACCACCACTCAATAGTGAAGTGCCACAGCTaGCGACTAAAGCCCTTTGCCTTTACAAACATCGGG +
Preference number: 3 (lower is better)
Translates to: FIHHHSIVKCHS*RLKPFAFTNIG
Trigger: CCCGATGTTTGTAAAGGCAAAGGGCTTTAGTCGCCAGCTGTGGCACTTCACTATTGAGTGGTGGTGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCAGGACTTTAGCCTCTaGAAAGATTTCTTCCTTTGC +
Preference number: 3 (lower is better)
Translates to: TFSEFTAASKLTTGSPALQDFSL*KDFFLC
Trigger: GCAAAGGAAGAAATCTTTCAAGAGGCTAAAGTCCTG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGAGTTACAGAAGCAACTaGTCTCACTCACTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVSYRSN*SHSLWH
Trigger: GTGCCACAGTGAGTGAGACAAGTTGCTTCTGTAACT...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCAGTTACAGAAGCAACTaGTCTCACTCACTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCSYRSN*SHSLWH
Trigger: GTGCCACAGTGAGTGAGACAAGTTGCTTCTGTAACT...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp GAGTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTaGCAAATGCAGCAAGCCTGTGACCGCACAATGAGG +
Preference number: 3 (lower is better)
Translates to: ELERTILKCWCR*QMQQACDRTMR
Trigger: CCTCATTGTGCGGTCACAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 72 bp AGTAAGAACATGATGGATGCCCCTGGAGCTTCTAGCTaGGCTCCTAGACTGCTATCTAGGAACATCTACTTC +
Preference number: 3 (lower is better)
Translates to: SKNMMDAPGASS*APRLLSRNIYF
Trigger: GAAGTAGATGTTCCTAGATAGCAGTCTAGGAGCTCAGCTAGAAGCTCCAGGGGCATCCATCATGTTCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp ACCCATCAGGTTTCCGGACACTCTGATAGTCAGGTCTaGACTTTTAATGCAGATGCCCAAGTTCTCATAGAC +
Preference number: 3 (lower is better)
Translates to: THQVSGHSDSQV*TFNADAQVLID
Trigger: GTCTATGAGAACTTGGGCATCTGCATTAAAAGTGCAGACCTGACTATCAGAGTGTCCGGAAACCTGATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR GCA 72 bp CTTCAAGACTTCATTCACCACCACTCAATAGTGAAGTaGCACAGCTGGCGACTAAAGCCCTTTGCCTTTACA +
Preference number: 3 (lower is better)
Translates to: LQDFIHHHSIVK*HSWRLKPFAFT
Trigger: TGTAAAGGCAAAGGGCTTTAGTCGCCAGCTGTGGCACTTCACTATTGAGTGGTGGTGAATGAAGTCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp TCCCATCGATCCTGGAGCTTACAATTTTGGTTAGACTaGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: SHRSWSLQFWLD*LTRQCLCESSC
Trigger: GCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTGTAAGCTCCAGGATCGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp GACAGGATCTCCCATCGATCCTGGAGCTTACAATTTTaGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: DRISHRSWSLQF*LDWLTRQCLCE
Trigger: TTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTGTAAGCTCCAGGATCGATGGGAGATCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGGAATATGGCTCACATaGGACCTGCTACTTACAGTG +
Preference number: 3 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLGIWLT*DLLLTV
Trigger: CACTGTAAGTAGCAGGTCCAATGTGAGCCATATTCC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCTCATGCAGGGCATGGTaGAAAATCAGGTTTCGCTAT +
Preference number: 3 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCSCRAW*KIRFRY
Trigger: ATAGCGAAACCTGATTTTCAACCATGCCCTGCATGA...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp GACTTCCTAGGATGCGTCTCTCATGCAGGGCATGGTTaGAAATCAGGTTTCGCTATCTCAGAATCTAAACTG +
Preference number: 3 (lower is better)
Translates to: DFLGCVSHAGHG*KSGFAISESKL
Trigger: CAGTTTAGATTCTGAGATAGCGAAACCTGATTTTCAACCATGCCCTGCATGAGAGACGCATCCTAGGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp AGTGATAGGTGCTTTCTTGGGTCACTCTCCACCTTTTaGGACATTCTCACTGAACCTGGGACTCAACTGTTT +
Preference number: 3 (lower is better)
Translates to: SDRCFLGSLSTF*DILTEPGTQLF
Trigger: AAACAGTTGAGTCCCAGGTTCAGTGAGAATGTCTCAAAAGGTGGAGAGTGACCCAAGAAAGCACCTATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp AGGTATGATCTAAGACTTCCTAGGATGCGTCTCTCATaGAGGGCATGGTTGAAAATCAGGTTTCGCTATCTC +
Preference number: 3 (lower is better)
Translates to: RYDLRLPRMRLS*RAWLKIRFRYL
Trigger: GAGATAGCGAAACCTGATTTTCAACCATGCCCTGCATGAGAGACGCATCCTAGGAAGTCTTAGATCATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp CTGTTGACCTTTTTCCATGGAAACACTACTCAGGTCTaGTTCATTTGGAGCAGGGTTGTTCCAGCATACACA +
Preference number: 3 (lower is better)
Translates to: LLTFFHGNTTQV*FIWSRVVPAYT
Trigger: TGTGTATGCTGGAACAACCCTGCTCCAAATGAAGCAGACCTGAGTAGTGTTTCCATGGAAAAAGGTCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CCA 72 bp GCCTGTCTTTCTGTCATCTCTGTTGACCTTTTTCCATaGAAACACTACTCAGGTCTGCTTCATTTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: ACLSVISVDLFP*KHYSGLLHLEQ
Trigger: CTGCTCCAAATGAAGCAGACCTGAGTAGTGTTTCCATGGAAAAAGGTCAACAGAGATGACAGAAAGACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCTGCTTTGGACTTCATaGTTACTCTCTGGTCAATCT +
Preference number: 3 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCLLWTS*LLSGQS
Trigger: AGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp ATAGAAGGCCTATGCTCTAAAGATGAGTGTGTGAGCTaGGAGGAATGTAGCCAGATAGCACACTATAGCTCA +
Preference number: 3 (lower is better)
Translates to: IEGLCSKDECVS*EECSQIAHYSS
Trigger: TGAGCTATAGTGTGCTATCTGGCTACATTCCTCTCAGCTCACACACTCATCTTTAGAGCATAGGCCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp CAGGATTATACCACCACTTGGCTCTTCCTTTTGAATTaGATCTGTGTGTGTGTGTACGCATATATGCCTGTC +
Preference number: 3 (lower is better)
Translates to: QDYTTTWLFLLN*ICVCVYAYMPV
Trigger: GACAGGCATATATGCGTACACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp GTAAGGCAGTTCCACTTCCATGACCATAACGCTCCATaGCAACACTTGAAAATAACATTCAGTTCCTGTGTT +
Preference number: 3 (lower is better)
Translates to: VRQFHFHDHNAP*QHLKITFSSCV
Trigger: AACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTCATGGAAGTGGAACTGCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGGAATATGGCTCACATaGGACCTGCTACTTACAGTG +
Preference number: 3 (lower is better)
Translates to: FQISALDFIVTLWSIWEIGIWLT*DLLLTV
Trigger: CACTGTAAGTAGCAGGTCCAATGTGAGCCATATTCC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 72 bp TCTCAAGCTCTTGAATTTCAGGATTATACCACCACTTaGCTCTTCCTTTTGAATTGCATCTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SQALEFQDYTTT*LFLLNCICVCV
Trigger: CACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTGAAATTCAAGAGCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTTCAAGAGAACAATTATaGACAGTGCGGAATATGGCT +
Preference number: 3 (lower is better)
Translates to: LSFLKENTVDDSVLALKCSREQL*TVRNMA
Trigger: AGCCATATTCCGCACTGTCAATAATTGTTCTCTTGA...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 72 bp AATTTCAGGATTATACCACCACTTGGCTCTTCCTTTTaGATTGCATCTGTGTGTGTGTGTACGCATATATGC +
Preference number: 3 (lower is better)
Translates to: NFRIIPPLGSSF*IASVCVCTHIC
Trigger: GCATATATGCGTACACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp AATCCACAAACTCATTCTGTCTTGTGTTATGACTGGTaGGCCTATGAGCAATGGATCCAAAAATGGAGTACA +
Preference number: 3 (lower is better)
Translates to: NPQTHSVLCYDW*AYEQWIQKWST
Trigger: TGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGTCATAACACAAGACAGAATGAGTTTGTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR GCA 72 bp ACTTTTAATGCAGATGCCCAAGTTCTCATAGACCTTTaGATGTATTGGTGTTTCCAGATATCTGCTTTGGAC +
Preference number: 3 (lower is better)
Translates to: TFNADAQVLIDL*MYWCFQISALD
Trigger: GTCCAAAGCAGATATCTGGAAACACCAATACATGCAAAGGTCTATGAGAACTTGGGCATCTGCATTAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 72 bp CTATCTAGGAACATCTACTTCAATCTAACCAAACCGTaGAATTTCGCCCAAAAGCTAAAATCTGGAGACATG +
Preference number: 3 (lower is better)
Translates to: LSRNIYFNLTKP*NFAQKLKSGDM
Trigger: CATGTCTCCAGATTTTAGCTTTTGGGCGAAATTCCACGGTTTGGTTAGATTGAAGTAGATGTTCCTAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CCA 72 bp TCCTTGTTCTTAAATGTGGGTGTCAAATGTTCTTTATaGACTAGGATGTATGTGGGCATGTGTGTAAGTCAG +
Preference number: 3 (lower is better)
Translates to: SLFLNVGVKCSL*TRMYVGMCVSQ
Trigger: CTGACTTACACACATGCCCACATACATCCTAGTCCATAAAGAACATTTGACACCCACATTTAAGAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR TCA 72 bp AATTTACCATCAAGTCCTGACAGACATACATTTTGGTaGGGTAAGTCCTGCATTTTCATCAGTACCAAGGAA +
Preference number: 3 (lower is better)
Translates to: NLPSSPDRHTFW*GKSCIFISTKE
Trigger: TTCCTTGGTACTGATGAAAATGCAGGACTTACCTCACCAAAATGTATGTCTGTCAGGACTTGATGGTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATCAAGAGAACAATTATaGACAGTGCGGAATATGGCT +
Preference number: 3 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESREQL*TVRNMA
Trigger: AGCCATATTCCGCACTGTCAATAATTGTTCTCTTGA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR TCA 72 bp AAAAGAGACTTTAGTTTCAGGAGCAAACACTACGTGTaGCAAACTAATCCACAAATATCAAAATTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: KRDFSFRSKHYV*QTNPQISKLAW
Trigger: CCAGGCCAATTTTGATATTTGTGGATTAGTTTGTCACACGTAGTGTTTGCTCCTGAAACTAAAGTCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACATAGGAGAACTGACCTaGGCCTGCGTCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHIGELT*ACVLAW
Trigger: CCAGGCAAGGACGCAGGCTCAGGTCAGTTCTCCTAT...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGCTCAGCCAGGACCCTaGTGGCCTCGCTGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRAQPGP*WPRCCS
Trigger: CGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGCCAAAGCCTCCTCGCTaGTGCTGGGGCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRPKPPR*CWGREW
Trigger: CCACTCCCTGCCCCAGCACCAGCGAGGAGGCTTTGG...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACCAGACGGTACAGCCTTaGTCTGACTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHQTVQP*SDCSGQ
Trigger: CTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTG...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACCCTGGAGTCTGTGACTaGCTACCACCTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHPGVCD*LPPASA
Trigger: TGCAGAAGCAGGTGGTAGCCAGTCACAGACTCCAGG...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACATGCGCCCTGTGCTCTaGGAGGCTACAACCCATATC +
Preference number: 4 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHMRPVL*EATTHI
Trigger: GATATGGGTTGTAGCCTCCCAGAGCACAGGGCGCAT...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CGGGTGCTGGGGATGCAGACTGGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACGGCTCTCTCGGCGGATaGACTGCATGCGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: RVLGMQTGGLGFVQPALHGSLGG*TACGIF
Trigger: AAAAATACCGCATGCAGTCCATCCGCCGAGAGAGCC...GTGAAGTGCTGGCTGCACAAACCCGAGGCCCCCAGTCTGCATCCCCAGCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGCTCAGCCAGGACCCTaGTGGCCTCGCTGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGAQPGP*WPRCCS
Trigger: CGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGCAGGGGCTGTGCTTCTaGTTCACAGGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRQGLCF*FTGLLC
Trigger: GCACAGGAGACCTGTGAACCAGAAGCACAGCCCCTG...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTCAGGCAGTCCAGGCTaGGGAGCAGAGGCGCCCATG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSGSPG*GAEAPM
Trigger: CATGGGCGCCTCTGCTCCTCAGCCTGGACTGCCTGA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGAGGCTGGTGGCTCTaGCCGGGCACCATATACCTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGGWWL*PGTIYL
Trigger: CAGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGCAGGAAGGCCCCCTaGCCCAATGCTGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGRKAP*PNAVAY
Trigger: ATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGGGGTCATGGGTAACTaGTCCTGTCTGACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRGVMGN*SCLTLS
Trigger: GGACAGAGTCAGACAGGAGCAGTTACCCATGACCCC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGCACATAGGCCCCCATaGCCGCCCCTCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGAHRPP*PPLQSL
Trigger: GAGGCTTTGGAGGGGCGGGCATGGGGGCCTATGTGC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGAGGAGACACAAGAGCTaGAATGTGGAGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRRRHKS*NVEQPH
Trigger: GTGGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCT...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGCCAGGACCCTGCTaGCCTCGCTGTTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGQPGPC*PRCCSV
Trigger: AACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGCGCCCATGGGACACTaGGCAGCAGCAGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGAPMGH*AAAVPS
Trigger: TGATGGCACTGCTGCTGCCCAGTGTCCCATGGGCGC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGAAGGTGGGGGTGCATaGAGGGACTGTACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGEGGGA*RDCTLR
Trigger: CCGGAGGGTACAGTCCCTCCATGCACCCCCACCTTC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGAGTTTCCGAGTCCATTaGTCTGCGGGTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRSFRVH*SAGGTA
Trigger: AGCAGTTCCACCCGCAGATCAATGGACTCGGAAACT...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGTCAGGCAGTCCAGGCTaGGGAGCAGAGGCGCCCATG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALSGSPG*GAEAPM
Trigger: CATGGGCGCCTCTGCTCCTCAGCCTGGACTGCCTGA...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAAGCATGCTTAGGCTGTaGGACGGGGAGTGGCACGGG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEASMLRL*DGEWHG
Trigger: CCCGTGCCACTCCCCGTCTCACAGCCTAAGCATGCT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGGCAGGAAGGCCCCCTaGCCCAATGCTGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAGRKAP*PNAVAY
Trigger: ATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGGGACCTCCCATAGCTaGTGCCTCAGGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAGTSHS*CLRERL
Trigger: CAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGCCTGCGTCCTTGCCTaGGCTTCCTCCAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGACVLA*ASSNVS
Trigger: GCTGACATTGGAGGAAGCCCAGGCAAGGACGCAGGC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCTAGTGCACCCAGCCTaGGAAGCCCCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGLVHPA*EAPGLF
Trigger: GAAGAGACCAGGGGCTTCCCAGGCTGGGTGCACTAG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCTCTGGGAAGGAGGTaGAGGGAGGGGCCGATTAGT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGPLGRR*REGPIS
Trigger: ACTAATCGGCCCCTCCCTCCACCTCCTTCCCAGAGG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTGCCCCACAACTGGTaGCTGCTCTGCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLPHNW*LLCRPL
Trigger: CAGAGGCCTGCAGAGCAGCCACCAGTTGTGGGGCAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTTGGCCTCTCGGGAGCTaGAGCCGTTCCCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFWPLGS*SRSLDL
Trigger: AAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCA...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTCTTGGGCAGTAGGCTaGTTCATCATCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRSWAVG*FIIWGN
Trigger: GTTCCCCCAGATGATGAACCAGCCTACTGCCCAAGA...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGTATGTCCTGCTCTGTaGATGGACAAAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRVCPAL*MDKARG
Trigger: CCCTCTGGCTTTGTCCATCCACAGAGCAGGACATAC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGAAGCTGCTGTCCCACTaGAGCAAGCTGACTCTATCT +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRKLLSH*SKLTLS
Trigger: AGATAGAGTCAGCTTGCTTCAGTGGGACAGCAGCTT...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGGGACTTGGGCCTTaGCAGAGAAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGQGLGP*QRSCSF
Trigger: GAAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCATAGGAGAACTGACCTaGGCCTGCGTCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGIGELT*ACVLAW
Trigger: CCAGGCAAGGACGCAGGCTCAGGTCAGTTCTCCTAT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAGTTACGTGATAGTCTaGGCGGGCCTGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSYVIV*AGLGGL
Trigger: CAGTCCTCCCAGGCCCGCTCAGACTATCACGTAACT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTCTCAGCAGGTTTGGTaGCCACACAATGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRSQQVW*PHNGKV
Trigger: AACCTTGCCATTGTGTGGGCACCAAACCTGCTGAGA...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGCTACCACCTGCTTCTaGATCCTTCTTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRATTCF*ILLTGT
Trigger: AGTCCCAGTAAGAAGGATGCAGAAGCAGGTGGTAGC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTGCTGGCCTCGCTGTTaGTCGGTTCCGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGCWPRC*SVPLLL
Trigger: CAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCAGCAGCCGAGGGCTaGTCAGCCAGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSAAEG*SARTLL
Trigger: CAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTGA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCACAACTGGTGGCTaGTCTGCAGGCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGPTTGG*SAGLWE
Trigger: TTCCCAGAGGCCTGCAGAGCAGCCACCAGTTGTGGG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCATGGAAGGTGGGGGTaGATGGAGGGACTGTACCCT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGHGRWG*MEGLYP
Trigger: AGGGTACAGTCCCTCCATGCACCCCCACCTTCCATG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGGCCCTTTTACCTTCTaGCGTGCTCGGCTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAGPFTF*RARLSR
Trigger: CCGAGAGAGCCGAGCACGGCAGAAGGTAAAAGGGCC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGGCCCTTTTACCTTCTaGCGTGCTCGGCTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGGPFTF*RARLSR
Trigger: CCGAGAGAGCCGAGCACGGCAGAAGGTAAAAGGGCC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGCCTGCGTCCTTGCCTaGGCTTCCTCCAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGACVLA*ASSNVS
Trigger: GCTGACATTGGAGGAAGCCCAGGCAAGGACGCAGGC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGCTAGTGCACCCAGCCTaGGAAGCCCCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMLVHPA*EAPGLF
Trigger: GAAGAGACCAGGGGCTTCCCAGGCTGGGTGCACTAG...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCATTGATCTGCGGGTaGAACTGCTCTGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGPLICG*NCSAGR
Trigger: CCGGCCAGCAGAGCAGTTCCACCCGCAGATCAATGG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGAGCAGAGGCGCCCATaGGACACTGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSREQRRP*DTGQQQ
Trigger: CTGCTGCTGCCCAGTGTCCCATGGGCGCCTCTGCTC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTGGCATCTGCAGCGCTaGAGTGCAAGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGWHLQR*SARQQP
Trigger: TGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGGAAGGTGGGGGTGCATaGAGGGACTGTACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALEGGGA*RDCTLR
Trigger: CCGGAGGGTACAGTCCCTCCATGCACCCCCACCTTC...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGCGGATCATGGAAGGTaGGGGTGCATGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGADHGR*GCMEGL
Trigger: CAGTCCCTCCATGCACCCCCACCTTCCATGATCCGC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTGGCTCAGAAGTGTCTaGCATCCCTTTGGACCCATA +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRWLRSV*HPFGPI
Trigger: TATGGGTCCAAAGGGATGCCAGACACTTCTGAGCCA...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCCAAAGCCTCCTCGCTaGTGCTGGGGCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRPKPPR*CWGREW
Trigger: CCACTCCCTGCCCCAGCACCAGCGAGGAGGCTTTGG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCTGCGTGTCGGGATGTaGCAAGGACAACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGLRVGM*QGQLCG
Trigger: CCCACAGAGTTGTCCTTGCCACATCCCGACACGCAG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAACGCTGTGCAGCTCTaGAGAACCTGGGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGNAVQL*RTWGTS
Trigger: TGAAGTGCCCCAGGTTCTTCAGAGCTGCACAGCGTT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGCATGCTTAGGCTGTaGGACGGGGAGTGGCACGGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSMLRL*DGEWHG
Trigger: CCCGTGCCACTCCCCGTCTCACAGCCTAAGCATGCT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAAGTTACGTGATAGTCTaGGCGGGCCTGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEASYVIV*AGLGGL
Trigger: CAGTCCTCCCAGGCCCGCTCAGACTATCACGTAACT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGCGGAGGGTTCCTTCTaGCCTGCCACCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFAEGSF*PATFQS
Trigger: GCTTTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCTACTTCTTCAGCTaGCCCCTGTTCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLYFFS*PLFQGL
Trigger: CAGCCCCTGGAACAGGGGGCAGCTGAAGAAGTAGAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGGGTCATGGGTAACTaGTCCTGTCTGACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGVMGN*SCLTLS
Trigger: GGACAGAGTCAGACAGGAGCAGTTACCCATGACCCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGTGCTGGCCTCGCTGTTaGTCGGTTCCGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALCWPRC*SVPLLL
Trigger: CAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCA...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGGGTGCTTCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMGASCT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGAAGCACC...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTCAGGGCCAGGTGGCTaGCTGGCTCGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSGPGG*LARGLS
Trigger: GGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCTGGAGTCTGTGACTaGCTACCACCTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGPGVCD*LPPASA
Trigger: TGCAGAAGCAGGTGGTAGCCAGTCACAGACTCCAGG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAGCCTGGGAAGCCCCTaGTCTCTTCAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSLGSP*SLQCLT
Trigger: AGTCAGACACTGAAGAGACCAGGGGCTTCCCAGGCT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGCCTCAGGGAGAGGCTaGTTACAGTTTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGASGRG*LQFPSP
Trigger: TGGACTCGGAAACTGTAACCAGCCTCTCCCTGAGGC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGAGTCAGTTGTGTTaGACTGGGTGGGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGQSQLC*TGWDLP
Trigger: TGGGAGGTCCCACCCAGTCCAACACAACTGACTCTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGCGTGCGCTGAAGGGTaGCAGCCACAAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAACAEG*QPQNQQ
Trigger: CTGCTGATTTTGTGGCTGCCACCCTTCAGCGCACGC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGTGGCATCTGCAGCGCTaGAGTGCAAGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALWHLQR*SARQQP
Trigger: TGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCA...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTATAACGAGGACCCATaGAGGCTGGTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGYNEDP*RLVALT
Trigger: GGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGAACAGAGCGGATCATaGAAGGTGGGGGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGEQSGS*KVGVHG
Trigger: TCCATGCACCCCCACCTTCCATGATCCGCTCTGTTC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAAATAGCCAGTTGCATTaGCCCGTGGGCGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEANSQLH*PVGVEA
Trigger: TGCCTCCACGCCCACGGGCCAATGCAACTGGCTATT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCATGCGCCCTGTGCTCTaGGAGGCTACAACCCATATC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGMRPVL*EATTHI
Trigger: GATATGGGTTGTAGCCTCCCAGAGCACAGGGCGCAT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCTGACCCAATGCTGTaGCGTATGTCCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGPDPML*RMSCSV
Trigger: CACAGAGCAGGACATACGCCACAGCATTGGGTCAGG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGGCAAGGACAACTCTGTaGGCAGGAAGGCCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALARTTL*AGRPPD
Trigger: GTCAGGGGGCCTTCCTGCCCACAGAGTTGTCCTTGC...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTGCGTGTCGGGATGTaGCAAGGACAACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLRVGM*QGQLCG
Trigger: CCCACAGAGTTGTCCTTGCCACATCCCGACACGCAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
3UTR CAA 72 bp GGGGGCCTCGGGTTTGTGCAGCCAGCACTTCACCCATaGAGCACAGCACAGCACAGCAGTCTCTTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: GGLGFVQPALHP*STAQHSSLFLL
Trigger: TAAAAGAAAGAGACTGCTGTGCTGTGCTGTGCTCAATGGGTGAAGTGCTGGCTGCACAAACCCGAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTAACGCTGTGCAGCTCTaGAGAACCTGGGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFNAVQL*RTWGTS
Trigger: TGAAGTGCCCCAGGTTCTTCAGAGCTGCACAGCGTT...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGTACAGCCTTGCTCTaGCTGCTCAGGACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGTALL*LLRTGR
Trigger: GCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGGTTCTGTGCGTGCGCTaGAGGGTGGCAGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALVLCVR*RVAATK
Trigger: TTTTGTGGCTGCCACCCTTCAGCGCACGCACAGAAC...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGNFCP*NGNRAD
Trigger: ATCCGCTCTGTTCCCATTTCACGGACAGAAGTTCCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGGGCCGCTCTCGGGGGTaGACATTTCTATGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMGRSRG*TFLCSS
Trigger: AGAGCTACATAGAAATGTTCACCCCCGAGAGCGGCC...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCACGACAGCAGGAGTGTTaGTGGACGACTCCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEARQQEC*WTTPRE
Trigger: TTCACGAGGAGTCGTCCATCAACACTCCTGCTGTCG...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCTGAGCCTGCGTCCTTaGCTGGGCTTCCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALLSLRP*LGFLQC
Trigger: ACATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTGTTCCAGGGGCTGTaGTTCTGGTTCACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLFQGL*FWFTGL
Trigger: GAGACCTGTGAACCAGAAGCACAGCCCCTGGAACAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCTCTACTTCTTCAGCTaGCCCCTGTTCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALLYFFS*PLFQGL
Trigger: CAGCCCCTGGAACAGGGGGCAGCTGAAGAAGTAGAG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGCCGAGTCCATTGATCTaGGGGTGGAACTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMPSPLI*GWNCSA
Trigger: AGCAGAGCAGTTCCACCCGCAGATCAATGGACTCGG...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACCTCCCATAGCTaGTGCCTCAGGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGTSHS*CLRERL
Trigger: CAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAAGACAGTGGACACGCTaGTCTTCCCAGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEARQWTR*SSQRGL
Trigger: AAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAAGCCATGGTGGCTGTaGTGGAATTCTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGKPWWL*WNSLQG
Trigger: CCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCGCTCAGCCAGGACCCTaGTGGCCTCGCTGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCAQPGP*WPRCCS
Trigger: CGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGC...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCCCACAACTGGTGGCTaGTCTGCAGGCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRPTTGG*SAGLWE
Trigger: TTCCCAGAGGCCTGCAGAGCAGCCACCAGTTGTGGG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAGGCAGCAGCCATCTTaGTCTCCATTGTCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGRQQPS*SPLSVL
Trigger: CAACACGGACAATGGAGAGCAAGATGGCTGCTGCCT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGACTGCTGGTGGCATCTaGAGCGCTGGAGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRTAGGI*SAGVQG
Trigger: GCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCCCTCTTTCCCCTCTaGCACAGAGAGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSLFPL*HREKSS
Trigger: ACTGGACTTCTCTCTGTGGCAGAGGGGAAAGAGGGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTATCAGGGCCAGGTGGCTaGCTGGCTCGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLSGPGG*LARGLS
Trigger: GGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGA...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGGGACACAACAGTCATaGTGCTCTGGCGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGGTQQS*CSGACC
Trigger: ACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGCACATAGGCCCCCATaGCCGCCCCTCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVAHRPP*PPLQSL
Trigger: GAGGCTTTGGAGGGGCGGGCATGGGGGCCTATGTGC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCACAAGAGCTGGAATGTaGAGCAGCCCCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGTRAGM*SSPTSS
Trigger: AGAGGAAGTGGGGCTGCTCCACATTCCAGCTCTTGT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGTGGAACTGCTCTGCTaGCCGGTCCGTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFVELLC*PVRLET
Trigger: TGTTTCCAAACGGACCGGCCAGCAGAGCAGTTCCAC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGGTGGAACTGCTCTGCTaGCCGGTCCGTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMVELLC*PVRLET
Trigger: TGTTTCCAAACGGACCGGCCAGCAGAGCAGTTCCAC...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGTGGAACTGCTCTGCTaGCCGGTCCGTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGVELLC*PVRLET
Trigger: TGTTTCCAAACGGACCGGCCAGCAGAGCAGTTCCAC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCCAGAGAGAGGGTGGTaGGCTTTGTCCCTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFPERGW*ALSLGK
Trigger: TTTGCCTAGGGACAAAGCCCACCACCCTCTCTCTGG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGAGAGAGGGTGGTaGGCTTTGTCCCTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGPERGW*ALSLGK
Trigger: TTTGCCTAGGGACAAAGCCCACCACCCTCTCTCTGG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGACCCAGAGAGAGGGTaGTGGGCTTTGTCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRDPERG*WALSLG
Trigger: GCCTAGGGACAAAGCCCACCACCCTCTCTCTGGGTC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCAGCCAGGACCCTGCTaGCCTCGCTGTTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPQPGPC*PRCCSV
Trigger: AACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTGGCCTCTCGGGAGCTaGAGCCGTTCCCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPWPLGS*SRSLDL
Trigger: AAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCGCCCATGGGACACTaGGCAGCAGCAGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPAPMGH*AAAVPS
Trigger: TGATGGCACTGCTGCTGCCCAGTGTCCCATGGGCGC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTGTGGAGGAACACTCTaGGGGCGAAACTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGCGGTL*GRNWQF
Trigger: AAACTGCCAGTTTCGCCCCCAGAGTGTTCCTCCACA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTATAACGAGGACCCATaGAGGCTGGTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGYNEDP*RLVALT
Trigger: GGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCGACTACACGGCTTaGAGTGGTGTCCAGACATGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGPDYTA*SGVQTC
Trigger: ACATGTCTGGACACCACTCCAAGCCGTGTAGTCGGG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCTTGGGCAGTAGGCTaGTTCATCATCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSWAVG*FIIWGN
Trigger: GTTCCCCCAGATGATGAACCAGCCTACTGCCCAAGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCTGGTAGACTGGTCTTaGGCAGTAGGCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGLVDWS*AVGWFI
Trigger: GATGAACCAGCCTACTGCCCAAGACCAGTCTACCAG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAGGAGCTGGAGGAGCTaGAGTACGGACTATAGCGAT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGRSWRS*STDYSD
Trigger: ATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGCTCTCTCGGCGGATaGACTGCATGCGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGSLGG*TACGIF
Trigger: AAAAATACCGCATGCAGTCCATCCGCCGAGAGAGCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAACTGGTATAGCACGCTaGGGTCCCTCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEATGIAR*GPSPGS
Trigger: AGAACCTGGAGAGGGACCCCAGCGTGCTATACCAGT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACCAAAGCCTCCTCGCTaGTGCTGGGGCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLPKPPR*CWGREW
Trigger: CCACTCCCTGCCCCAGCACCAGCGAGGAGGCTTTGG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGCAAGGACAACTCTGTaGGCAGGAAGGCCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRARTTL*AGRPPD
Trigger: GTCAGGGGGCCTTCCTGCCCACAGAGTTGTCCTTGC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCATGCCATACCTCTCGATaGACGCTGTGCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEACHTSR*TLCSSE
Trigger: TTCAGAGCTGCACAGCGTTCATCGAGAGGTATGGCA...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCACTCTTCACTTTTAGCTaGGCGGAGGGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEALFTFS*AEGSFC
Trigger: GCAGAAGGAACCCTCCGCTCAGCTAAAAGTGAAGAG...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCTTCACTTTTAGCTaGGCGGAGGGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLFTFS*AEGSFC
Trigger: GCAGAAGGAACCCTCCGCTCAGCTAAAAGTGAAGAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCCAGCACGTCGCCATTaGAAGAGGCAGAGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRPARRH*KRQRAH
Trigger: ATGCGCTCTCTGCCTCTTTCAATGGCGACGTGCTGG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACATCCTCAGCCGAATaGGGAGACACAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGTSSAE*GDTRAG
Trigger: TCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAGGTACAGCCTTGCTCTaGCTGCTCAGGACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLGTALL*LLRTGR
Trigger: GCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACC...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGGTACAGCCTTGCTCTaGCTGCTCAGGACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLGTALL*LLRTGR
Trigger: GCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGTTCTGTGCGTGCGCTaGAGGGTGGCAGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRVLCVR*RVAATK
Trigger: TTTTGTGGCTGCCACCCTTCAGCGCACGCACAGAAC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAGGAGGCTGGTGGCTCTaGCCGGGCACCATATACCTG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLGGWWL*PGTIYL
Trigger: CAGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCC...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAGGCAGGAAGGCCCCCTaGCCCAATGCTGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLGRKAP*PNAVAY
Trigger: ATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCC...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCAGCGGGGAAGCTCTGTaGGCTGGGAGAATCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLSGEAL*AGRIGG
Trigger: ACCGCCGATTCTCCCAGCTCACAGAGCTTCCCCGCT...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCTCAGCAGGTTTGGTaGCCACACAATGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSQQVW*PHNGKV
Trigger: AACCTTGCCATTGTGTGGGCACCAAACCTGCTGAGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCACTTCCATGAAAGCTaGTGTCCCACTGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGHFHES*CPTEAS
Trigger: GCTTGCTTCAGTGGGACAGCAGCTTTCATGGAAGTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCTGAGCCTGCGTCCTTaGCTGGGCTTCCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRLSLRP*LGFLQC
Trigger: ACATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTCACTTTCATTACGCTaGAACTTGCGTTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRSLSLR*NLRLET
Trigger: TGTCTCCAAACGCAAGTTGCAGCGTAATGAAAGTGA...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGCGGAGGGTTCCTTCTaGCCTGCCACCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRAEGSF*PATFQS
Trigger: GCTTTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCGGGTGGAACTGCTCTaGTGGCCGGTCCGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPRVELL*WPVRLE
Trigger: TTCCAAACGGACCGGCCAGCAGAGCAGTTCCACCCG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGACCTCCCATAGCTGCTaGCTCAGGGAGAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRTSHSC*LRERLV
Trigger: AACCAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCTACTTGGTGGAGTTaGTCCCCAGAGTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSTWWS*SPESVV
Trigger: CACAACTGACTCTGGGGAGCAACTCCACCAAGTAGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTGCTGGCCTCGCTGTTaGTCGGTTCCGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPCWPRC*SVPLLL
Trigger: CAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTGGACCAAAGGGCTCTaGGGTGACATCAGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRWTKGL*GDIRPS
Trigger: GCTAGGCCTGATGTCACCGCAGAGCCCTTTGGTCCA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGCGGATGGACTGCATaGGGTATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGGWTA*GIFPCP
Trigger: AGGACATGGAAAAATACCGCATGCAGTCCATCCGCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGCTTTTCTGCCTGTGTaGTGCCATACCCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGAFLPV*CHTLHD
Trigger: ATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGTCAGGGCCAGGTGGCTaGCTGGCTCGAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLSGPGG*LARGLS
Trigger: GGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGA...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACACAACAGTCATGCTaGTCTGGCGCTTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGTQQSC*SGACCV
Trigger: CACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCATTCTGCATGGATCTaGGTGTCGGGATGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFHSAWI*VSGCGK
Trigger: CTTGCCACATCCCGACACGCAGATCCATGCAGAATG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCATTCTGCATGGATCTaGGTGTCGGGATGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGHSAWI*VSGCGK
Trigger: CTTGCCACATCCCGACACGCAGATCCATGCAGAATG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGATCTCAGGGACATCTaGTCCTCTTGCCATTGCGCT +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFDLRDI*SSCHCA
Trigger: AGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCCTGCGTCCTTGCCTaGGCTTCCTCCAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPACVLA*ASSNVS
Trigger: GCTGACATTGGAGGAAGCCCAGGCAAGGACGCAGGC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGGCCACTCCGATGTCTaGTGGACTCAAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAGHSDV*WTQVNI
Trigger: GATGTTGACTTGAGTCCACCAGACATCGGAGTGGCC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCATCAGTTGTGTTGGACTaGGTGGGACCTCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEASVVLD*VGPPIA
Trigger: AGCTATGGGAGGTCCCACCCAGTCCAACACAACTGA...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTCAGTTGTGTTGGACTaGGTGGGACCTCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSVVLD*VGPPIA
Trigger: AGCTATGGGAGGTCCCACCCAGTCCAACACAACTGA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGGGTTTATCCACACTaGTACCAAGGTAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGGVYPH*YQGKRG
Trigger: CCCTCTCTTACCTTGGTACCAGTGTGGATAAACCCC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGCGTGCGCTGAAGGGTaGCAGCCACAAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRACAEG*QPQNQQ
Trigger: CTGCTGATTTTGTGGCTGCCACCCTTCAGCGCACGC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCTGCCCCACAACTGGTaGCTGCTCTGCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCLPHNW*LLCRPL
Trigger: CAGAGGCCTGCAGAGCAGCCACCAGTTGTGGGGCAG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTGTGGAGGAACACTCTaGGGGCGAAACTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGCGGTL*GRNWQF
Trigger: AAACTGCCAGTTTCGCCCCCAGAGTGTTCCTCCACA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGAAGGTGGGGGTGCATaGAGGGACTGTACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLEGGGA*RDCTLR
Trigger: CCGGAGGGTACAGTCCCTCCATGCACCCCCACCTTC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAGGAGCTGGAGGAGCTaGAGTACGGACTATAGCGAT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGRSWRS*STDYSD
Trigger: ATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGACTGTAATAGGAGCTaGAGGAGCTGGAGTACGGAC +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFDCNRS*RSWSTD
Trigger: GTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAGCCTCACTTCCTTGTaGTTCAGGGTTAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSLTSL*FRVRDP
Trigger: GGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTTTCTCAGGGCCAGGTaGCTGCCTGGCTCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPFLRAR*LPGSRS
Trigger: AGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAAA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCCTTGTAGCAGTCTCTaGAGTGTTTCTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFPCSSL*SVSQGQ
Trigger: CTGGCCCTGAGAAACACTCCAGAGACTGCTACAAGG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGCCTTGTAGCAGTCTCTaGAGTGTTTCTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMPCSSL*SVSQGQ
Trigger: CTGGCCCTGAGAAACACTCCAGAGACTGCTACAAGG...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCTTGTAGCAGTCTCTaGAGTGTTTCTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGPCSSL*SVSQGQ
Trigger: CTGGCCCTGAGAAACACTCCAGAGACTGCTACAAGG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACTCTCCAGACACTCTaGCTCAGCTTTTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGTLQTL*LSFWRT
Trigger: AGTCCTCCAAAAGCTGAGTCAGAGTGTCTGGAGAGT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCTTCCTGGAGTCTGTaGCTGGCTACCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPASWSL*LATTCF
Trigger: GAAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTGGGATAAGAGAGACTaGACTGACAGGAACGGGATC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGWDKRD*TDRNGI
Trigger: GATCCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTTCAGGCAGTCCAGGCTaGGGAGCAGAGGCGCCCATG +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCSGSPG*GAEAPM
Trigger: CATGGGCGCCTCTGCTCCTCAGCCTGGACTGCCTGA...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAAAGGAGTGGTAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGKGVVI*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTACCACTCCTTT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALGNFCP*NGNRAD
Trigger: ATCCGCTCTGTTCCCATTTCACGGACAGAAGTTCCC...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCACACTTCCATGAAAGCTaGTGTCCCACTGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAHFHES*CPTEAS
Trigger: GCTTGCTTCAGTGGGACAGCAGCTTTCATGGAAGTG...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGTTCCTTCTGCCCTaGCACCTTTCAAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRGFLLP*HLSKPW
Trigger: CCATGGCTTTGAAAGGTGGCAGGGCAGAAGGAACCC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTTCACAGGTCTCCTGTaGCTCTCTCTCACCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGFTGLL*LSLTCF
Trigger: AAAGCAGGTGAGAGAGAGGCACAGGAGACCTGTGAA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCTGTTCCAGGGGCTGTaGTTCTGGTTCACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRLFQGL*FWFTGL
Trigger: GAGACCTGTGAACCAGAAGCACAGCCCCTGGAACAG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCAGACGGTACAGCCTTaGTCTGACTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRQTVQP*SDCSGQ
Trigger: CTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACGGGTGGAACTGCTCTaGTGGCCGGTCCGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLRVELL*WPVRLE
Trigger: TTCCAAACGGACCGGCCAGCAGAGCAGTTCCACCCG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGCGGGTGGAACTGCTCTaGTGGCCGGTCCGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVRVELL*WPVRLE
Trigger: TTCCAAACGGACCGGCCAGCAGAGCAGTTCCACCCG...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGACCTCCCATAGCTGCTaGCTCAGGGAGAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPTSHSC*LRERLV
Trigger: AACCAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGACAGTGGACACGCTaGTCTTCCCAGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRRQWTR*SSQRGL
Trigger: AAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGTGCTTCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGASCT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGAAGCACC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTCTGCAGCGCTGGAGTaGAAGGCAGCAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSAALE*KAAAIL
Trigger: CAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAGTGGTAATTTGAACTaGTGGTGGCATCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSGNLN*WWHLQR
Trigger: GCGCTGCAGATGCCACCAGCAGTTCAAATTACCACT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCATGGAAGGTGGGGGTaGATGGAGGGACTGTACCCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPHGRWG*MEGLYP
Trigger: AGGGTACAGTCCCTCCATGCACCCCCACCTTCCATG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGAGAAATAGCCAGTTaGATTGGCCCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRREIAS*IGPWAW
Trigger: CCACGCCCACGGGCCAATGCAACTGGCTATTTCTCT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTCTCGGCGGATGGACTaGATGCGGTATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSRRMD*MRYFSM
Trigger: CATGGAAAAATACCGCATGCAGTCCATCCGCCGAGA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCATCTCGGCGGATGGACTaGATGCGGTATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEASRRMD*MRYFSM
Trigger: CATGGAAAAATACCGCATGCAGTCCATCCGCCGAGA...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGTAATGAGCTTGCCGTaGTTTTTAGACACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRVMSLP*FLDTGF
Trigger: AAAACCAGTGTCTAAAAAGCACGGCAAGCTCATTAC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGAAGTCTCTGGATATTaGAGGCAACGCCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAEVSGY*RQRQRD
Trigger: GTCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGCTGCAACTTGCGTTTaGAGACAGAAGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGAATCV*RQKRTS
Trigger: GGAAGTCCTCTTCTGTCTCCAAACGCAAGTTGCAGC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGGAGACACAAGAGCTaGAATGTGGAGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRRRHKS*NVEQPH
Trigger: GTGGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCACTCCGATGTCTGGTaGACTCAAGTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGHSDVW*TQVNIL
Trigger: GAGGATGTTGACTTGAGTCCACCAGACATCGGAGTG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGTTTCTCCTGGACTaGAGATACAGGTTCGGAACT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGQFLLD*RYRFGT
Trigger: AGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTTTCCTAGCTGCAGCTaGGTGGGGGATCTATTTATG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGFPSCS*VGDLFM
Trigger: CATAAATAGATCCCCCACCCAGCTGCAGCTAGGAAA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCAGGGGCTGTGCTTCTaGTTCACAGGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPQGLCF*FTGLLC
Trigger: GCACAGGAGACCTGTGAACCAGAAGCACAGCCCCTG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACCATTGATCTGCGGGTaGAACTGCTCTGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLPLICG*NCSAGR
Trigger: CCGGCCAGCAGAGCAGTTCCACCCGCAGATCAATGG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCTATTAAGTCTACTTaGTGGAGTTGCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGPIKST*WSCSPE
Trigger: CTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACAGGAGAAATGGAGTaGAGACTGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGTGEME*RLVLLQ
Trigger: TTGGAGCAGGACCAGTCTCCACTCCATTTCTCCTGT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGACAGGAGAAATGGAGTaGAGACTGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMTGEME*RLVLLQ
Trigger: TTGGAGCAGGACCAGTCTCCACTCCATTTCTCCTGT...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGGAGCAGAGGCGCCCATaGGACACTGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLEQRRP*DTGQQQ
Trigger: CTGCTGCTGCCCAGTGTCCCATGGGCGCCTCTGCTC...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCTCTGGGGGCGAAACTaGCAGTTTGGAGTCATATTG +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFLWGRN*QFGVIL
Trigger: CAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTGGGAGGACTGGTATaGCTTATACTGGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLGGLV*LILVDW
Trigger: CCAGTCTACCAGTATAAGCCATACCAGTCCTCCCAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGATTGGCCCGTGGGCGTaGAGGCAAACCAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRIGPWA*RQTSIV
Trigger: AACTATGCTGGTTTGCCTCCACGCCCACGGGCCAAT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGAATAGCCAGTTGCATTaGCCCGTGGGCGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPNSQLH*PVGVEA
Trigger: TGCCTCCACGCCCACGGGCCAATGCAACTGGCTATT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTGGCTCAGAAGTGTCTaGCATCCCTTTGGACCCATA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGWLRSV*HPFGPI
Trigger: TATGGGTCCAAAGGGATGCCAGACACTTCTGAGCCA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTATTTCTCAGGGCCAGGTaGCTGCCTGGCTCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLFLRAR*LPGSRS
Trigger: AGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAAA...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCGCAAGGACAACTCTGTaGGCAGGAAGGCCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCARTTL*AGRPPD
Trigger: GTCAGGGGGCCTTCCTGCCCACAGAGTTGTCCTTGC...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTGCCATACCTCTCGATaGACGCTGTGCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRCHTSR*TLCSSE
Trigger: TTCAGAGCTGCACAGCGTTCATCGAGAGGTATGGCA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCAGGGACTTGGGCCTTaGCAGAGAAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCQGLGP*QRSCSF
Trigger: GAAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCTG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGAGGACTTCCCCAAATTaGAAAAGGAACGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALRTSPN*KRNASC
Trigger: GCAGCTGGCGTTCCTTTTTCAATTTGGGGAAGTCCT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACCAGCACGTCGCCATTaGAAGAGGCAGAGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLPARRH*KRQRAH
Trigger: ATGCGCTCTCTGCCTCTTTCAATGGCGACGTGCTGG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGCTTCCTGGAGTCTGTaGCTGGCTACCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVASWSL*LATTCF
Trigger: GAAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAGGTGGGAGAGTCACTaGAATAGGCTCAGATATGTT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGRWESH*NRLRYV
Trigger: AACATATCTGAGCCTATTTCAGTGACTCTCCCACCT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGTCCCAAGATGTAGGTaGTGCATTCTGAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGVPRCR*CILSYS
Trigger: ACTGTAGCTCAGAATGCATCACCTACATCTTGGGAC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGTTTCCGAGTCCATTaGTCTGCGGGTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSFRVH*SAGGTA
Trigger: AGCAGTTCCACCCGCAGATCAATGGACTCGGAAACT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAGGGAAGAGTCCCACCTaGAATCCATGCTTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSGKSPT*NPCLPL
Trigger: GAGAGGCAAGCATGGATTTCAGGTGGGACTCTTCCC...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCTCTCTCTTTCAAGATaGCCCGCTGCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFLSLSR*PAALAS
Trigger: AGAAGCTAAAGCAGCGGGGCATCTTGAAAGAGAGAG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGCTGAGCCTGCGTCCTTaGCTGGGCTTCCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVLSLRP*LGFLQC
Trigger: ACATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAG...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGGAATCACCGTCAACTaGATGGAGAGAAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGGITVN*MERSKG
Trigger: TCCCTTACTTCTCTCCATGCAGTTGACGGTGATTCC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCCGAGTCCATTGATCTaGGGGTGGAACTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPPSPLI*GWNCSA
Trigger: AGCAGAGCAGTTCCACCCGCAGATCAATGGACTCGG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTCAGCAGCCGAGGGCTaGTCAGCCAGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCSAAEG*SARTLL
Trigger: CAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTGA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGACTGCTGGTGGCATCTaGAGCGCTGGAGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLTAGGI*SAGVQG
Trigger: GCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGT...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAGAGGGATGGCTTTTCTaGCTGTGTGCTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSEGWLF*LCAAIP
Trigger: GGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTC...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGGGATGGCTTTTCTaGCTGTGTGCTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPEGWLF*LCAAIP
Trigger: GGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGAGTTATGGTAGTTaGTTGGCTCAGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGQSYGS*LAQKCL
Trigger: CAGACACTTCTGAGCCAAGCAACTACCATAACTCTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGACACAACAGTCATGCTaGTCTGGCGCTTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRTQQSC*SGACCV
Trigger: CACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGCACATAGGCCCCCATaGCCGCCCCTCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLAHRPP*PPLQSL
Trigger: GAGGCTTTGGAGGGGCGGGCATGGGGGCCTATGTGC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGTGCTGGATGACATCATaGATTTTTATCAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRCWMTS*IFINRS
Trigger: AGAACGGTTGATAAAAATCCATGATGTCATCCAGCA...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGAGACCAGCAGGGACTTaGGCCTTGACAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPRPAGT*ALTEKL
Trigger: CAGCTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCACCTTTCAAAGCCATaGCTTTCATTTCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGHLSKP*LSFLRA
Trigger: AGCCCTCAGAAATGAAAGCCATGGCTTTGAAAGGTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCATCACCGTCAACTGCATaGAGAGAAGTAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEASPSTA*REVRDS
Trigger: AGAGTCCCTTACTTCTCTCCATGCAGTTGACGGTGA...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTCACCGTCAACTGCATaGAGAGAAGTAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSPSTA*REVRDS
Trigger: AGAGTCCCTTACTTCTCTCCATGCAGTTGACGGTGA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCACTCCGATGTCTGGTaGACTCAAGTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALHSDVW*TQVNIL
Trigger: GAGGATGTTGACTTGAGTCCACCAGACATCGGAGTG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCACTCCGATGTCTaGTGGACTCAAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRGHSDV*WTQVNI
Trigger: GATGTTGACTTGAGTCCACCAGACATCGGAGTGGCC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCACTGCATCCTTCTTACTaGGACTCAGTTTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEALHPSY*DSVYPW
Trigger: CCAGGGATAAACTGAGTCCCAGTAAGAAGGATGCAG...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTGCATCCTTCTTACTaGGACTCAGTTTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGLHPSY*DSVYPW
Trigger: CCAGGGATAAACTGAGTCCCAGTAAGAAGGATGCAG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGAGCCTGGGAAGCCCCTaGTCTCTTCAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSLGSP*SLQCLT
Trigger: AGTCAGACACTGAAGAGACCAGGGGCTTCCCAGGCT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGCCATTGATCTGCGGGTaGAACTGCTCTGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLPLICG*NCSAGR
Trigger: CCGGCCAGCAGAGCAGTTCCACCCGCAGATCAATGG...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCACAGAGTCAGTTGTGTTaGACTGGGTGGGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSQSQLC*TGWDLP
Trigger: TGGGAGGTCCCACCCAGTCCAACACAACTGACTCTG...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCTGCTCTTCCCAGCGTaGTCTTCAGGGAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRLLFPA*SSGKLP
Trigger: TGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAAATGGAGTGGAGACTaGTCCTGCTCCAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGKWSGD*SCSKKE
Trigger: CTCCTTTTTGGAGCAGGACCAGTCTCCACTCCATTT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGTAAGTTCTGAGGAATaGTGGGGTTTATCCACACTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGVSSEE*WGLSTL
Trigger: CAGTGTGGATAAACCCCACCATTCCTCAGAACTTAC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTAATTTGAACTGCTaGTGGCATCTGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRGNLNC*WHLQRW
Trigger: CCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGATGCAAACAGTTTTCTaGACCAAAGGGCTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGMQTVF*TKGLCG
Trigger: ACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCAT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCTTGGGCAGTAGGCTaGTTCATCATCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSWAVG*FIIWGN
Trigger: GTTCCCCCAGATGATGAACCAGCCTACTGCCCAAGA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCTTATACTGGTAGACTaGTCTTGGGCAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALLILVD*SWAVGW
Trigger: CCAGCCTACTGCCCAAGACCAGTCTACCAGTATAAG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGATTGGCCCGTGGGCGTaGAGGCAAACCAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPIGPWA*RQTSIV
Trigger: AACTATGCTGGTTTGCCTCCACGCCCACGGGCCAAT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGTCTTCTTGCACAGCTaGTGTCATGTTGTCATACTG +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGVFLHS*CHVVIL
Trigger: CAGTATGACAACATGACACCAGCTGTGCAAGAAGAC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCTTCTGCGGGAGGGATaGCTTTTCTGCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPLLREG*LFCLCA
Trigger: AGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCATGTCTGGCATCCCTTTaGACCCATAATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEACLASL*THNLTG
Trigger: GCCAGTTAGATTATGGGTCCAAAGGGATGCCAGACA...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGTCTGTCCAGATCTTTaGGAAGCCTCACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGVCPDL*EASLPC
Trigger: ACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGAC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGACTGGTATAGCACGCTaGGGTCCCTCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPTGIAR*GPSPGS
Trigger: AGAACCTGGAGAGGGACCCCAGCGTGCTATACCAGT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTTCATCCGTTGCTGCTaGAACAGCATCAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGFIRCC*NSIREL
Trigger: AAGTTCTCTGATGCTGTTTCAGCAGCAACGGATGAA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGGGGGAGTTGCTGGATaGCATCATGGATTTTTATCA +
Preference number: 4 (lower is better)
Translates to: REAGPEVPHPKPSKECNFGGVAG*HHGFLS
Trigger: TGATAAAAATCCATGATGTCATCCAGCAACTCCCCC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGGGGGAGTTGCTGGATaGCATCATGGATTTTTATCA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGGGVAG*HHGFLS
Trigger: TGATAAAAATCCATGATGTCATCCAGCAACTCCCCC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAAGCTGCTGTCCCACTaGAGCAAGCTGACTCTATCT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRKLLSH*SKLTLS
Trigger: AGATAGAGTCAGCTTGCTTCAGTGGGACAGCAGCTT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCAACAACCACAGACTaGATCCTCACTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSTTTD*ILTSMK
Trigger: TTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGGACTTCCCCAAATTaGAAAAGGAACGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRRTSPN*KRNASC
Trigger: GCAGCTGGCGTTCCTTTTTCAATTTGGGGAAGTCCT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAGGTGGGAGAGTCACTaGAATAGGCTCAGATATGTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGRWESH*NRLRYV
Trigger: AACATATCTGAGCCTATTTCAGTGACTCTCCCACCT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTGGGATAAGAGAGACTaGACTGACAGGAACGGGATC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRWDKRD*TDRNGI
Trigger: GATCCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGGAGGCTGGTGGCTCTaGCCGGGCACCATATACCTG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLGGWWL*PGTIYL
Trigger: CAGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGAGTTTTCCCAGGATCTaGTTTGCTGCGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALSFPRI*FAAQMD
Trigger: ATCCATCTGCGCAGCAAATCAGATCCTGGGAAAACT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGATTAACTCGACACAATaGCCAGGGAAGAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRINSTQ*PGKSPT
Trigger: GGTGGGACTCTTCCCTGGTCATTGTGTCGAGTTAAT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCATTACGCTGCAACTTaGGTTTGGAGACAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALHYAAT*VWRQKR
Trigger: CCTCTTCTGTCTCCAAACGCAAGTTGCAGCGTAATG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGGGTTCCTTCTGCCCTaGCACCTTTCAAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLGFLLP*HLSKPW
Trigger: CCATGGCTTTGAAAGGTGGCAGGGCAGAAGGAACCC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGATTGTCATAGGAATTaGACCGGTTCCCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRDCHRN*TGSPAR
Trigger: ACGTGCTGGGGAACCGGTGCAATTCCTATGACAATC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTTCGGAACTTGCGGTaGTTCCTGGAGTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVRNLR*FLESVT
Trigger: AGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTACAGGTTCGGAACTTaGGGTGCTTCCTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPYRFGT*GASWSL
Trigger: CAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTACTGCTGGTGGCATCTaGAGCGCTGGAGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCTAGGI*SAGVQG
Trigger: GCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGT...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGTGGTAATTTGAACTaGTGGTGGCATCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSGNLN*WWHLQR
Trigger: GCGCTGCAGATGCCACCAGCAGTTCAAATTACCACT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGGATGGACTGCATaGGGTATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRGGWTA*GIFPCP
Trigger: AGGACATGGAAAAATACCGCATGCAGTCCATCCGCC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCATCCCTCTTTCCCCTCTaGCACAGAGAGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSSLFPL*HREKSS
Trigger: ACTGGACTTCTCTCTGTGGCAGAGGGGAAAGAGGGA...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTCCCTCTTTCCCCTCTaGCACAGAGAGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSLFPL*HREKSS
Trigger: ACTGGACTTCTCTCTGTGGCAGAGGGGAAAGAGGGA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCACATTCTGCATGGATCTaGGTGTCGGGATGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSHSAWI*VSGCGK
Trigger: CTTGCCACATCCCGACACGCAGATCCATGCAGAATG...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGTGCCTCTCCACCATGTaGTTAATACTTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALCLSTM*LILWEA
Trigger: TGCCTCCCAAAGTATTAAGCACATGGTGGAGAGGCA...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGAGACCAGCAGGGACTTaGGCCTTGACAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVRPAGT*ALTEKL
Trigger: CAGCTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCT...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGACAAGAGCTGGAATGTaGAGCAGCCCCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPTRAGM*SSPTSS
Trigger: AGAGGAAGTGGGGCTGCTCCACATTCCAGCTCTTGT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAAGGAGACACAAGAGCTaGAATGTGGAGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLRRHKS*NVEQPH
Trigger: GTGGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCT...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCAGTTTCTCCTGGACTaGAGATACAGGTTCGGAACT +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALQFLLD*RYRFGT
Trigger: AGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAATTAAGTCTACTTGGTaGAGTTGCTCCCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAIKSTW*SCSPES
Trigger: TGACTCTGGGGAGCAACTCCACCAAGTAGACTTAAT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGATTAAGTCTACTTGGTaGAGTTGCTCCCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGIKSTW*SCSPES
Trigger: TGACTCTGGGGAGCAACTCCACCAAGTAGACTTAAT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACAGCCAGGACCCTGCTaGCCTCGCTGTTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLQPGPC*PRCCSV
Trigger: AACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTGGCCTCTCGGGAGCTaGAGCCGTTCCCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCWPLGS*SRSLDL
Trigger: AAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGAGCAGAGGCGCCCATaGGACACTGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWEQRRP*DTGQQQ
Trigger: CTGCTGCTGCCCAGTGTCCCATGGGCGCCTCTGCTC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAATTTGAACTGCTGGTaGCATCTGCAGCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRNLNCW*HLQRWS
Trigger: ACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGTAATTTGAACTGCTaGTGGCATCTGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGNLNC*WHLQRW
Trigger: CCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGATGCAAACAGTTTTCTaGACCAAAGGGCTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALMQTVF*TKGLCG
Trigger: ACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCAT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCAACTTATTGTGGTGTaGAGGAACACTCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPQLIVV*RNTLGA
Trigger: CGCCCCCAGAGTGTTCCTCCACACCACAATAAGTTG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCCAACTTATTGTaGTGTGGAGGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRGSNLL*CGGTLW
Trigger: CCAGAGTGTTCCTCCACACCACAATAAGTTGGAGCC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGACTGTAATAGGAGCTaGAGGAGCTGGAGTACGGAC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPDCNRS*RSWSTD
Trigger: GTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCTTCTGCGGGAGGGATaGCTTTTCTGCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCLLREG*LFCLCA
Trigger: AGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTATGTCCTGCTCTGTaGATGGACAAAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVCPAL*MDKARG
Trigger: CCCTCTGGCTTTGTCCATCCACAGAGCAGGACATAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
3UTR CAA 72 bp GAAACACTACTCAGGTCTGCTTCATTTGGAGCAGGGTaGTTCCAGCATACACAGCATGAGTGGATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ETLLRSASFGAG*FQHTQHEWIAR
Trigger: CCTGGCAATCCACTCATGCTGTGTATGCTGGAACAACCCTGCTCCAAATGAAGCAGACCTGAGTAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 72 bp CTCCTCCTTTTAGTGGCTGTGTGGCGTTTCACTGTTTaGGTGAACTCTGGCCCATTTGTCACTTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLVAVWRFTV*VNSGPFVTCSP
Trigger: TGGAGAGCAAGTGACAAATGGGCCAGAGTTCACCAAAACAGTGAAACGCCACACAGCCACTAAAAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTCGCATGCATATTTGTaGTGGAGCAATAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSHAYL*WSNSLL
Trigger: TAGCAGACTATTGCTCCATCACAAATATGCATGCGA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGCTCAAGTCCAGGGTaGAAAACGGACTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGSSPG*KTDSVS
Trigger: AGAAACTGAGTCCGTTTTTCACCCTGGACTTGAGCC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTGGGATAAGAGAGACTaGACTGACAGGAACGGGATC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPWDKRD*TDRNGI
Trigger: GATCCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTTTGTCTGTAAGTTCTaGGGAATGGTGGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGFVCKF*GMVGFI
Trigger: GATAAACCCCACCATTCCTCAGAACTTACAGACAAA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAAAGGAGTGGTAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRKGVVI*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTACCACTCCTTT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCTCTTGCCATTGCGCTaGGTGTTTCCTCCCAATCAG +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCLLPLR*VFPPNQ
Trigger: CTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTTCAAGATGCCCCGCTaGTTTAGCTTCTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGFKMPR*FSFCFV
Trigger: AACAAAACAGAAGCTAAAGCAGCGGGGCATCTTGAA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCATTACGCTGCAACTTaGGTTTGGAGACAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRHYAAT*VWRQKR
Trigger: CCTCTTCTGTCTCCAAACGCAAGTTGCAGCGTAATG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGTCACTTTCATTACGCTaGAACTTGCGTTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSLSLR*NLRLET
Trigger: TGTCTCCAAACGCAAGTTGCAGCGTAATGAAAGTGA...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGATTGTCATAGGAATTaGACCGGTTCCCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPDCHRN*TGSPAR
Trigger: ACGTGCTGGGGAACCGGTGCAATTCCTATGACAATC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCTACCACCTGCTTCTaGATCCTTCTTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPATTCF*ILLTGT
Trigger: AGTCCCAGTAAGAAGGATGCAGAAGCAGGTGGTAGC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGTTCGGAACTTGCGGTaGTTCCTGGAGTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVVRNLR*FLESVT
Trigger: AGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAAC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTATACAGGTTCGGAACTTaGGGTGCTTCCTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLYRFGT*GASWSL
Trigger: CAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTA...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTTCACAGGTCTCCTGTaGCTCTCTCTCACCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPFTGLL*LSLTCF
Trigger: AAAGCAGGTGAGAGAGAGGCACAGGAGACCTGTGAA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGCTCTACTTCTTCAGCTaGCCCCTGTTCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLLYFFS*PLFQGL
Trigger: CAGCCCCTGGAACAGGGGGCAGCTGAAGAAGTAGAG...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGAGTGGAGACTGGTCCTaGTCCAAAAAGGAGACAGTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSGDWS*SKKETV
Trigger: CACTGTCTCCTTTTTGGAGCAGGACCAGTCTCCACT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCAGGCAGCAGCCATCTTaGTCTCCATTGTCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCRQQPS*SPLSVL
Trigger: CAACACGGACAATGGAGAGCAAGATGGCTGCTGCCT...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGCGGATGGACTGCATaGGGTATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGGWTA*GIFPCP
Trigger: AGGACATGGAAAAATACCGCATGCAGTCCATCCGCC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTCTCGGCGGATGGACTaGATGCGGTATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSRRMD*MRYFSM
Trigger: CATGGAAAAATACCGCATGCAGTCCATCCGCCGAGA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGGCCCTTTTACCTTCTaGCGTGCTCGGCTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLGPFTF*RARLSR
Trigger: CCGAGAGAGCCGAGCACGGCAGAAGGTAAAAGGGCC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCCTGAAATCCATGCTTaGCTCTCCACCATGTGCTTA +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRPEIHA*LSTMCL
Trigger: TAAGCACATGGTGGAGAGGCAAGCATGGATTTCAGG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAAGTCTCTGGATATTaGAGGCAACGCCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPEVSGY*RQRQRD
Trigger: GTCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCCTCTTTCTTTCAAGTaGGAACTCAATGACGGTGTG +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALPLSFK*ELNDGV
Trigger: CACACCGTCATTGAGTTCCCACTTGAAAGAAAGAGG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAGCTGCAACTTGCGTTTaGAGACAGAAGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSAATCV*RQKRTS
Trigger: GGAAGTCCTCTTCTGTCTCCAAACGCAAGTTGCAGC...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCACCTTTCAAAGCCATaGCTTTCATTTCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALHLSKP*LSFLRA
Trigger: AGCCCTCAGAAATGAAAGCCATGGCTTTGAAAGGTG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCACACTCCGATGTCTGGTaGACTCAAGTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSHSDVW*TQVNIL
Trigger: GAGGATGTTGACTTGAGTCCACCAGACATCGGAGTG...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGGCCACTCCGATGTCTaGTGGACTCAAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLGHSDV*WTQVNI
Trigger: GATGTTGACTTGAGTCCACCAGACATCGGAGTGGCC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGCCTGGAGTCTGTGACTaGCTACCACCTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLPGVCD*LPPASA
Trigger: TGCAGAAGCAGGTGGTAGCCAGTCACAGACTCCAGG...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCAGTTTCTCCTGGACTaGAGATACAGGTTCGGAACT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRQFLLD*RYRFGT
Trigger: AGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGACTCAGTTTCTCCTaGACTGGAGATACAGGTTCG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGLSFS*TGDTGS
Trigger: CGAACCTGTATCTCCAGTCCAGGAGAAACTGAGTCC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTTTCCTAGCTGCAGCTaGGTGGGGGATCTATTTATG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRFPSCS*VGDLFM
Trigger: CATAAATAGATCCCCCACCCAGCTGCAGCTAGGAAA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGCTTCTAGCCTTTTCTaGATCCCCAGATATATGGTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGASSLF*IPRYMV
Trigger: AACCATATATCTGGGGATCCAGAAAAGGCTAGAAGC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGCTGCTCTTCCCAGCGTaGTCTTCAGGGAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVLLFPA*SSGKLP
Trigger: TGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAG...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGTTTATCCACACTaGTACCAAGGTAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPGVYPH*YQGKRG
Trigger: CCCTCTCTTACCTTGGTACCAGTGTGGATAAACCCC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGACCCAGAGAGAGGGTaGTGGGCTTTGTCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLDPERG*WALSLG
Trigger: GCCTAGGGACAAAGCCCACCACCCTCTCTCTGGGTC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACCTCTGGGAAGGAGGTaGAGGGAGGGGCCGATTAGT +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLPLGRR*REGPIS
Trigger: ACTAATCGGCCCCTCCCTCCACCTCCTTCCCAGAGG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGCGCCCATGGGACACTaGGCAGCAGCAGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWAPMGH*AAAVPS
Trigger: TGATGGCACTGCTGCTGCCCAGTGTCCCATGGGCGC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTGGCATCTGCAGCGCTaGAGTGCAAGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCWHLQR*SARQQP
Trigger: TGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGCGAAACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGAKLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTTTCGC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCTCTGGGGGCGAAACTaGCAGTTTGGAGTCATATTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPLWGRN*QFGVIL
Trigger: CAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCTTATACTGGTAGACTaGTCTTGGGCAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPLILVD*SWAVGW
Trigger: CCAGCCTACTGCCCAAGACCAGTCTACCAGTATAAG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCAGGAGCTGGAGGAGCTaGAGTACGGACTATAGCGAT +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLRSWRS*STDYSD
Trigger: ATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCT...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTGTCTGGCATCCCTTTaGACCCATAATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRCLASL*THNLTG
Trigger: GCCAGTTAGATTATGGGTCCAAAGGGATGCCAGACA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCGTATGTCCTGCTCTGTaGATGGACAAAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCVCPAL*MDKARG
Trigger: CCCTCTGGCTTTGTCCATCCACAGAGCAGGACATAC...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 72 bp GAAGGGACAGAGCTCCACCAGGCTCTCAAAAATGATTaGAACTTACAGCCCACAGGAGAAGACTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: EGTELHQALKND*NLQPTGEDSSL
Trigger: CAGAGATGAGTCTTCTCCTGTGGGCTGTAAGTTCAAATCATTTTTGAGAGCCTGGTGGAGCTCTGTCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 72 bp AGTGTGAGCGTCCAGCCTGTCTTTCTGTCATCTCTGTaGACCTTTTTCCATGGAAACACTACTCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SVSVQPVFLSSL*TFFHGNTTQVC
Trigger: GCAGACCTGAGTAGTGTTTCCATGGAAAAAGGTCAACAGAGATGACAGAAAGACAGGCTGGACGCTCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAAGAGCACATCCACATaGTTGAGAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGKSTST*LRMNST
Trigger: TGTTGAATTCATTCTCAATCATGTGGATGTGCTCTT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCAGGGACTTGGGCCTTaGCAGAGAAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCQGLGP*QRSCSF
Trigger: GAAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCTG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAATAGGAGAACTGACCTaGGCCTGCGTCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLIGELT*ACVLAW
Trigger: CCAGGCAAGGACGCAGGCTCAGGTCAGTTCTCCTAT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCAGGACTTCCCCAAATTaGAAAAGGAACGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLRTSPN*KRNASC
Trigger: GCAGCTGGCGTTCCTTTTTCAATTTGGGGAAGTCCT...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCATGGCTTTCATTTCTaGGGGCTCACTTTCATTACG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRHGFHF*GLTFIT
Trigger: CGTAATGAAAGTGAGCCCTCAGAAATGAAAGCCATG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCCAGCACGTCGCCATTaGAAGAGGCAGAGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCPARRH*KRQRAH
Trigger: ATGCGCTCTCTGCCTCTTTCAATGGCGACGTGCTGG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGAGTTTCCGAGTCCATTaGTCTGCGGGTGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLSFRVH*SAGGTA
Trigger: AGCAGTTCCACCCGCAGATCAATGGACTCGGAAACT...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCAGGGAAACTTCCATaGTCATCAGACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSGKLP*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGGAAGTTTCCCTGA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAAGCATGCTTAGGCTGTaGGACGGGGAGTGGCACGGG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESMLRL*DGEWHG
Trigger: CCCGTGCCACTCCCCGTCTCACAGCCTAAGCATGCT...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTAGTTACGTGATAGTCTaGGCGGGCCTGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCSYVIV*AGLGGL
Trigger: CAGTCCTCCCAGGCCCGCTCAGACTATCACGTAACT...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAAGTTTTCCCAGGATCTaGTTTGCTGCGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSSFPRI*FAAQMD
Trigger: ATCCATCTGCGCAGCAAATCAGATCCTGGGAAAACT...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGAGTTTTCCCAGGATCTaGTTTGCTGCGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSFPRI*FAAQMD
Trigger: ATCCATCTGCGCAGCAAATCAGATCCTGGGAAAACT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCTCTCTCTTTCAAGATaGCCCGCTGCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPLSLSR*PAALAS
Trigger: AGAAGCTAAAGCAGCGGGGCATCTTGAAAGAGAGAG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGCAAGGTTTTTCGCATaGATATTTGTGATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGARFFA*IFVMEQ
Trigger: TTGCTCCATCACAAATATGCATGCGAAAAACCTTGC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGTACAGGTTCGGAACTTaGGGTGCTTCCTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLYRFGT*GASWSL
Trigger: CAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTA...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTCTGTTCCAGGGGCTGTaGTTCTGGTTCACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCLFQGL*FWFTGL
Trigger: GAGACCTGTGAACCAGAAGCACAGCCCCTGGAACAG...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGGGACCTCCCATAGCTaGTGCCTCAGGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEGTSHS*CLRERL
Trigger: CAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTCTACTTGGTGGAGTTaGTCCCCAGAGTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVSTWWS*SPESVV
Trigger: CACAACTGACTCTGGGGAGCAACTCCACCAAGTAGA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAAGTGGAGACTGGTCCTaGTCCAAAAAGGAGACAGTG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLSGDWS*SKKETV
Trigger: CACTGTCTCCTTTTTGGAGCAGGACCAGTCTCCACT...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATACCCACAACTGGTGGCTaGTCTGCAGGCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIPTTGG*SAGLWE
Trigger: TTCCCAGAGGCCTGCAGAGCAGCCACCAGTTGTGGG...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTATCTGCAGCGCTGGAGTaGAAGGCAGCAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLSAALE*KAAAIL
Trigger: CAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGA...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTATGGACCAAAGGGCTCTaGGGTGACATCAGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLWTKGL*GDIRPS
Trigger: GCTAGGCCTGATGTCACCGCAGAGCCCTTTGGTCCA...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGAGAGAAATAGCCAGTTaGATTGGCCCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLREIAS*IGPWAW
Trigger: CCACGCCCACGGGCCAATGCAACTGGCTATTTCTCT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTAGAGAAATAGCCAGTTaGATTGGCCCGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCREIAS*IGPWAW
Trigger: CCACGCCCACGGGCCAATGCAACTGGCTATTTCTCT...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCAGAGTTATGGTAGTTaGTTGGCTCAGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRQSYGS*LAQKCL
Trigger: CAGACACTTCTGAGCCAAGCAACTACCATAACTCTG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGGGTTAGAGACCCCTaGCCTGATGTCATATATTTC +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRRVRDP*PDVIYF
Trigger: GAAATATATGACATCAGGGCAGGGGTCTCTAACCCT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGATCGGCGGTCATAAATaGAGAGATGAAGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMIGGHK*RDEDVC
Trigger: ACAAACATCTTCATCTCTGCATTTATGACCGCCGAT...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGCTGCAACTTGCGTTTaGAGACAGAAGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVAATCV*RQKRTS
Trigger: GGAAGTCCTCTTCTGTCTCCAAACGCAAGTTGCAGC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCAGGGGCTGTGCTTCTaGTTCACAGGTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCQGLCF*FTGLLC
Trigger: GCACAGGAGACCTGTGAACCAGAAGCACAGCCCCTG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTCAGAGTCAGTTGTGTTaGACTGGGTGGGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCQSQLC*TGWDLP
Trigger: TGGGAGGTCCCACCCAGTCCAACACAACTGACTCTG...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCACCTATTAAGTCTACTTaGTGGAGTTGCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSPIKST*WSCSPE
Trigger: CTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGG...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGAAATGGAGTGGAGACTaGTCCTGCTCCAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPKWSGD*SCSKKE
Trigger: CTCCTTTTTGGAGCAGGACCAGTCTCCACTCCATTT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGGGGTTTATCCACACTaGTACCAAGGTAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVGVYPH*YQGKRG
Trigger: CCCTCTCTTACCTTGGTACCAGTGTGGATAAACCCC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGAGTTCTGAGGAATGGTaGGGTTTATCCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSSEEW*GLSTLV
Trigger: TACCAGTGTGGATAAACCCCACCATTCCTCAGAACT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGACCCAGAGAGAGGGTaGTGGGCTTTGTCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWDPERG*WALSLG
Trigger: GCCTAGGGACAAAGCCCACCACCCTCTCTCTGGGTC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATACCTCTGGGAAGGAGGTaGAGGGAGGGGCCGATTAGT +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIPLGRR*REGPIS
Trigger: ACTAATCGGCCCCTCCCTCCACCTCCTTCCCAGAGG...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAACTGCCCCACAACTGGTaGCTGCTCTGCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELELPHNW*LLCRPL
Trigger: CAGAGGCCTGCAGAGCAGCCACCAGTTGTGGGGCAG...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGAATTTGAACTGCTGGTaGCATCTGCAGCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVNLNCW*HLQRWS
Trigger: ACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATT...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGCAACTTATTGTGGTGTaGAGGAACACTCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLQLIVV*RNTLGA
Trigger: CGCCCCCAGAGTGTTCCTCCACACCACAATAAGTTG...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGCGGATCATGGAAGGTaGGGGTGCATGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIADHGR*GCMEGL
Trigger: CAGTCCCTCCATGCACCCCCACCTTCCATGATCCGC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACTGGGAGGACTGGTATaGCTTATACTGGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLLGGLV*LILVDW
Trigger: CCAGTCTACCAGTATAAGCCATACCAGTCCTCCCAG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGACTGTAATAGGAGCTaGAGGAGCTGGAGTACGGAC +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLDCNRS*RSWSTD
Trigger: GTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTATTGGCCCGTGGGCGTaGAGGCAAACCAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCIGPWA*RQTSIV
Trigger: AACTATGCTGGTTTGCCTCCACGCCCACGGGCCAAT...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGGCTCTCTCGGCGGATaGACTGCATGCGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLGSLGG*TACGIF
Trigger: AAAAATACCGCATGCAGTCCATCCGCCGAGAGAGCC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGTTATGGTAGTTGCTTaGCTCAGAAGTGTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRVMVVA*LRSVWH
Trigger: ATGCCAGACACTTCTGAGCCAAGCAACTACCATAAC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGTTTCTCAGGGCCAGGTaGCTGCCTGGCTCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWFLRAR*LPGSRS
Trigger: AGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAAA...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCCAGGTTATCATACTaGGACACAACAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSRLSY*DTTVML
Trigger: CAGCATGACTGTTGTGTCCCAGTATGATAACCTGGA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGAAGCTGCTGTCCCACTaGAGCAAGCTGACTCTATCT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLKLLSH*SKLTLS
Trigger: AGATAGAGTCAGCTTGCTTCAGTGGGACAGCAGCTT...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGACATCCTCAGCCGAATaGGGAGACACAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLTSSAE*GDTRAG
Trigger: TCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTACATCCTCAGCCGAATaGGGAGACACAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCTSSAE*GDTRAG
Trigger: TCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGT...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp CAATTTTGGTTAGACTGGTTAACCAGGCAATGCCTCTGTGAATCTTCCTGCCTCGTCCCAAGATGTAGGTaGTGCATTCTGAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: QFWLDWLTRQCLCESSCLVPRCR*CILSYS
Trigger: ACTGTAGCTCAGAATGCATCACCTACATCTTGGGAC...GAGGCAGGAAGATTCACAGAGGCATTGCCTGGTTAACCAGTCTAACCAAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAAAAGGAGTGGTAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLKGVVI*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTACCACTCCTTT...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGGCAAGGTTTTTCGCATaGATATTTGTGATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALARFFA*IFVMEQ
Trigger: TTGCTCCATCACAAATATGCATGCGAAAAACCTTGC...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGTCTCAGCAGGTTTGGTaGCCACACAATGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLSQQVW*PHNGKV
Trigger: AACCTTGCCATTGTGTGGGCACCAAACCTGCTGAGA...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGCGGAGGGTTCCTTCTaGCCTGCCACCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIAEGSF*PATFQS
Trigger: GCTTTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAGGAATCACCGTCAACTaGATGGAGAGAAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLGITVN*MERSKG
Trigger: TCCCTTACTTCTCTCCATGCAGTTGACGGTGATTCC...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCAGACGGTACAGCCTTaGTCTGACTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCQTVQP*SDCSGQ
Trigger: CTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGGGGTCATGGGTAACTaGTCCTGTCTGACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCGVMGN*SCLTLS
Trigger: GGACAGAGTCAGACAGGAGCAGTTACCCATGACCCC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGACCTCCCATAGCTGCTaGCTCAGGGAGAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWTSHSC*LRERLV
Trigger: AACCAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTAGACAGTGGACACGCTaGTCTTCCCAGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCRQWTR*SSQRGL
Trigger: AAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCT...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGAGTGGAGACTGGTCCTaGTCCAAAAAGGAGACAGTG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLSGDWS*SKKETV
Trigger: CACTGTCTCCTTTTTGGAGCAGGACCAGTCTCCACT...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGAAGCCATGGTGGCTGTaGTGGAATTCTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLKPWWL*WNSLQG
Trigger: CCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGCTTTTCTGCCTGTGTaGTGCCATACCCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLAFLPV*CHTLHD
Trigger: ATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGAGGGATGGCTTTTCTaGCTGTGTGCTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLEGWLF*LCAAIP
Trigger: GGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGGGACACAACAGTCATaGTGCTCTGGCGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCGTQQS*CSGACC
Trigger: ACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CAACTCTTGCTGACAGTGAAATGGCATCGGCCAGTTAGACAACTGCATGACTCAATAGTGAGAGCTGTATaGTGCCAAACTCCACGTTCT +
Preference number: 4 (lower is better)
Translates to: QLLLTVKWHRPVRQLHDSIVRAV*CQTPRS
Trigger: AGAACGTGGAGTTTGGCAGCATACAGCTCTCACTAT...TGAGTCATGCAGTTGTCTAACTGGCCGATGCCATTTCACTGTCAGCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTAGACCAGCAGGGACTTaGGCCTTGACAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCRPAGT*ALTEKL
Trigger: CAGCTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCT...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCCTCTTTCTTTCAAGTaGGAACTCAATGACGGTGTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPPLSFK*ELNDGV
Trigger: CACACCGTCATTGAGTTCCCACTTGAAAGAAAGAGG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGGACTCAGTTTCTCCTaGACTGGAGATACAGGTTCG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLGLSFS*TGDTGS
Trigger: CGAACCTGTATCTCCAGTCCAGGAGAAACTGAGTCC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTTTCCTAGCTGCAGCTaGGTGGGGGATCTATTTATG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVFPSCS*VGDLFM
Trigger: CATAAATAGATCCCCCACCCAGCTGCAGCTAGGAAA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAAGCCTGGGAAGCCCCTaGTCTCTTCAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLSLGSP*SLQCLT
Trigger: AGTCAGACACTGAAGAGACCAGGGGCTTCCCAGGCT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGCCTCAGGGAGAGGCTaGTTACAGTTTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCASGRG*LQFPSP
Trigger: TGGACTCGGAAACTGTAACCAGCCTCTCCCTGAGGC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGCCTATTAAGTCTACTTaGTGGAGTTGCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVPIKST*WSCSPE
Trigger: CTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGG...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGCTGCTCTTCCCAGCGTaGTCTTCAGGGAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLLLFPA*SSGKLP
Trigger: TGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAG...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGCGTGCGCTGAAGGGTaGCAGCCACAAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIACAEG*QPQNQQ
Trigger: CTGCTGATTTTGTGGCTGCCACCCTTCAGCGCACGC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTATAACGAGGACCCATaGAGGCTGGTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCYNEDP*RLVALT
Trigger: GGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCCCGACTACACGGCTTaGAGTGGTGTCCAGACATGT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCPDYTA*SGVQTC
Trigger: ACATGTCTGGACACCACTCCAAGCCGTGTAGTCGGG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGCGGATCATGGAAGGTaGGGGTGCATGGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEADHGR*GCMEGL
Trigger: CAGTCCCTCCATGCACCCCCACCTTCCATGATCCGC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCTTCTTGCACAGCTaGTGTCATGTTGTCATACTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVFLHS*CHVVIL
Trigger: CAGTATGACAACATGACACCAGCTGTGCAAGAAGAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAGTCTGTCCAGATCTTTaGGAAGCCTCACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLVCPDL*EASLPC
Trigger: ACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGAC...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAACTGGTATAGCACGCTaGGGTCCCTCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLTGIAR*GPSPGS
Trigger: AGAACCTGGAGAGGGACCCCAGCGTGCTATACCAGT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTCCAGGTTATCATACTaGGACACAACAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSRLSY*DTTVML
Trigger: CAGCATGACTGTTGTGTCCCAGTATGATAACCTGGA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACCTGACCCAATGCTGTaGCGTATGTCCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLPDPML*RMSCSV
Trigger: CACAGAGCAGGACATACGCCACAGCATTGGGTCAGG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 72 bp GTGTTTTTCATTCCAACGCCCCCTTTGGAGGATTCTTaGAAGCCAGTTGAGTTTCCTGAGGACTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: VFFIPTPPLEDS*KPVEFPEDCIL
Trigger: CAGAATGCAGTCCTCAGGAAACTCAACTGGCTTCAAAGAATCCTCCAAAGGGGGCGTTGGAATGAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTCAACAACCACAGACTaGATCCTCACTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPSTTTD*ILTSMK
Trigger: TTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGAAGAGCACATCCACATaGTTGAGAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALKSTST*LRMNST
Trigger: TGTTGAATTCATTCTCAATCATGTGGATGTGCTCTT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACATGGCTTTCATTTCTaGGGGCTCACTTTCATTACG +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLHGFHF*GLTFIT
Trigger: CGTAATGAAAGTGAGCCCTCAGAAATGAAAGCCATG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACTCTTCACTTTTAGCTaGGCGGAGGGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLLFTFS*AEGSFC
Trigger: GCAGAAGGAACCCTCCGCTCAGCTAAAAGTGAAGAG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTTTGGAGGACTACATTaGAATGACATGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRFGGLH*NDMGSK
Trigger: CTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTGGCTCAAGTCCAGGGTaGAAAACGGACTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCGSSPG*KTDSVS
Trigger: AGAAACTGAGTCCGTTTTTCACCCTGGACTTGAGCC...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGAGTTGGTTACTGACTaGGGAACTTTCTGGTTAATT +
Preference number: 4 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRELVTD*GTFWLI
Trigger: AATTAACCAGAAAGTTCCTCAGTCAGTAACCAACTC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTCACTTCCATGAAAGCTaGTGTCCCACTGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCHFHES*CPTEAS
Trigger: GCTTGCTTCAGTGGGACAGCAGCTTTCATGGAAGTG...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGCATTACGCTGCAACTTaGGTTTGGAGACAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLHYAAT*VWRQKR
Trigger: CCTCTTCTGTCTCCAAACGCAAGTTGCAGCGTAATG...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGGAATCACCGTCAACTaGATGGAGAGAAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLGITVN*MERSKG
Trigger: TCCCTTACTTCTCTCCATGCAGTTGACGGTGATTCC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGTTCGGAACTTGCGGTaGTTCCTGGAGTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCVRNLR*FLESVT
Trigger: AGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAAC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAAAGCCATGGTGGCTGTaGTGGAATTCTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLKPWWL*WNSLQG
Trigger: CCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGGTGCTTCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEGASCT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGAAGCACC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAAGGCAGCAGCCATCTTaGTCTCCATTGTCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLRQQPS*SPLSVL
Trigger: CAACACGGACAATGGAGAGCAAGATGGCTGCTGCCT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATCTGCAGCGCTGGAGTaGAAGGCAGCAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESAALE*KAAAIL
Trigger: CAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTAGTGGTAATTTGAACTaGTGGTGGCATCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCSGNLN*WWHLQR
Trigger: GCGCTGCAGATGCCACCAGCAGTTCAAATTACCACT...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATGGACCAAAGGGCTCTaGGGTGACATCAGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEWTKGL*GDIRPS
Trigger: GCTAGGCCTGATGTCACCGCAGAGCCCTTTGGTCCA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAACATGGAAGGTGGGGGTaGATGGAGGGACTGTACCCT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEHGRWG*MEGLYP
Trigger: AGGGTACAGTCCCTCCATGCACCCCCACCTTCCATG...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCATGTTGTCATACTaGGACATGATAGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVMLSY*DMIGPF
Trigger: AAAAGGGCCTATCATGTCGCAGTATGACAACATGAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR GCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGGCTTTTCTGCCTGTGTaGTGCCATACCCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLAFLPV*CHTLHD
Trigger: ATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGC...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGCCTCAGGGAGAGGCTaGTTACAGTTTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWASGRG*LQFPSP
Trigger: TGGACTCGGAAACTGTAACCAGCCTCTCCCTGAGGC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTCAGTTGTGTTGGACTaGGTGGGACCTCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCSVVLD*VGPPIA
Trigger: AGCTATGGGAGGTCCCACCCAGTCCAACACAACTGA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGAAATGGAGTGGAGACTaGTCCTGCTCCAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLKWSGD*SCSKKE
Trigger: CTCCTTTTTGGAGCAGGACCAGTCTCCACTCCATTT...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGGTTCCCTGGACCTTGTaGGAATTATTTAATCCTATA +
Preference number: 4 (lower is better)
Translates to: TFSEFTAASKLTTGSPALVPWTL*ELFNPI
Trigger: TATAGGATTAAATAATTCCCACAAGGTCCAGGGAAC...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTGTGGAGGAACACTCTaGGGGCGAAACTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCCGGTL*GRNWQF
Trigger: AAACTGCCAGTTTCGCCCCCAGAGTGTTCCTCCACA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACTGGTAGACTGGTCTTaGGCAGTAGGCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLLVDWS*AVGWFI
Trigger: GATGAACCAGCCTACTGCCCAAGACCAGTCTACCAG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAAATAGCCAGTTGCATTaGCCCGTGGGCGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELENSQLH*PVGVEA
Trigger: TGCCTCCACGCCCACGGGCCAATGCAACTGGCTATT...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGCTTCTGCGGGAGGGATaGCTTTTCTGCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWLLREG*LFCLCA
Trigger: AGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAG...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTGGCTCAGAAGTGTCTaGCATCCCTTTGGACCCATA +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLWLRSV*HPFGPI
Trigger: TATGGGTCCAAAGGGATGCCAGACACTTCTGAGCCA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAAGCCTCACTTCCTTGTaGTTCAGGGTTAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLSLTSL*FRVRDP
Trigger: GGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCT...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTCCAGGTTATCATACTaGGACACAACAGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVSRLSY*DTTVML
Trigger: CAGCATGACTGTTGTGTCCCAGTATGATAACCTGGA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAACTGCGTGTCGGGATGTaGCAAGGACAACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELELRVGM*QGQLCG
Trigger: CCCACAGAGTTGTCCTTGCCACATCCCGACACGCAG...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 72 bp TGTTTTACCATTGTAAGAAATGTGCAGGCCCTGCCCTaGGAACTGTCTCAGGGACTTCTCCAAACAGCATTT +
Preference number: 4 (lower is better)
Translates to: CFTIVRNVQALP*ELSQGLLQTAF
Trigger: AAATGCTGTTTGGAGAAGTCCCTGAGACAGTTCCAAGGGCAGGGCCTGCACATTTCTTACAATGGTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 72 bp CTTTTTCCATGGAAACACTACTCAGGTCTGCTTCATTaGGAGCAGGGTTGTTCCAGCATACACAGCATGAGT +
Preference number: 4 (lower is better)
Translates to: LFPWKHYSGLLH*EQGCSSIHSMS
Trigger: ACTCATGCTGTGTATGCTGGAACAACCCTGCTCCAAATGAAGCAGACCTGAGTAGTGTTTCCATGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAAACGCTGTGCAGCTCTaGAGAACCTGGGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELENAVQL*RTWGTS
Trigger: TGAAGTGCCCCAGGTTCTTCAGAGCTGCACAGCGTT...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGTTTGGAGGACTACATTaGAATGACATGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPFGGLH*NDMGSK
Trigger: CTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAA...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR TCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGAGGTGGGAGAGTCACTaGAATAGGCTCAGATATGTT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLRWESH*NRLRYV
Trigger: AACATATCTGAGCCTATTTCAGTGACTCTCCCACCT...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGGTCCCAAGATGTAGGTaGTGCATTCTGAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLVPRCR*CILSYS
Trigger: ACTGTAGCTCAGAATGCATCACCTACATCTTGGGAC...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGTCAGGGAAACTTCCATaGTCATCAGACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLSGKLP*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGGAAGTTTCCCTGA...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTTTGTCTGTAAGTTCTaGGGAATGGTGGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVFVCKF*GMVGFI
Trigger: GATAAACCCCACCATTCCTCAGAACTTACAGACAAA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCTCACTTTCATTACGCTaGAACTTGCGTTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCSLSLR*NLRLET
Trigger: TGTCTCCAAACGCAAGTTGCAGCGTAATGAAAGTGA...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTTCACAGGTCTCCTGTaGCTCTCTCTCACCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCFTGLL*LSLTCF
Trigger: AAAGCAGGTGAGAGAGAGGCACAGGAGACCTGTGAA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGTCATGTTGTCATACTaGGACATGATAGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVVMLSY*DMIGPF
Trigger: AAAAGGGCCTATCATGTCGCAGTATGACAACATGAC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGACACAACAGTCATGCTaGTCTGGCGCTTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWTQQSC*SGACCV
Trigger: CACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTCTGCATCCTTCTTACTaGGACTCAGTTTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCLHPSY*DSVYPW
Trigger: CCAGGGATAAACTGAGTCCCAGTAAGAAGGATGCAG...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGGCTCCAACTTATTGTaGTGTGGAGGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLGSNLL*CGGTLW
Trigger: CCAGAGTGTTCCTCCACACCACAATAAGTTGGAGCC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGAACAGAGCGGATCATaGAAGGTGGGGGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEEQSGS*KVGVHG
Trigger: TCCATGCACCCCCACCTTCCATGATCCGCTCTGTTC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAATGCGCCCTGTGCTCTaGGAGGCTACAACCCATATC +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEMRPVL*EATTHI
Trigger: GATATGGGTTGTAGCCTCCCAGAGCACAGGGCGCAT...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGAGCCTCACTTCCTTGTaGTTCAGGGTTAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWSLTSL*FRVRDP
Trigger: GGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAACCTGACCCAATGCTGTaGCGTATGTCCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEPDPML*RMSCSV
Trigger: CACAGAGCAGGACATACGCCACAGCATTGGGTCAGG...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTTCATCCGTTGCTGCTaGAACAGCATCAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLFIRCC*NSIREL
Trigger: AAGTTCTCTGATGCTGTTTCAGCAGCAACGGATGAA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGGGGGGAGTTGCTGGATaGCATCATGGATTTTTATCA +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLGGVAG*HHGFLS
Trigger: TGATAAAAATCCATGATGTCATCCAGCAACTCCCCC...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGTCGCATGCATATTTGTaGTGGAGCAATAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLSHAYL*WSNSLL
Trigger: TAGCAGACTATTGCTCCATCACAAATATGCATGCGA...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTTTGGAGGACTACATTaGAATGACATGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVFGGLH*NDMGSK
Trigger: CTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAACTCTCCAGACACTCTaGCTCAGCTTTTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEITLQTL*LSFWRT
Trigger: AGTCCTCCAAAAGCTGAGTCAGAGTGTCTGGAGAGT...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCTCTCTCTTTCAAGATaGCCCGCTGCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCLSLSR*PAALAS
Trigger: AGAAGCTAAAGCAGCGGGGCATCTTGAAAGAGAGAG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGTCTACTTGGTGGAGTTaGTCCCCAGAGTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWSTWWS*SPESVV
Trigger: CACAACTGACTCTGGGGAGCAACTCCACCAAGTAGA...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTCAGAGTTATGGTAGTTaGTTGGCTCAGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCQSYGS*LAQKCL
Trigger: CAGACACTTCTGAGCCAAGCAACTACCATAACTCTG...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGAGGGTTAGAGACCCCTaGCCTGATGTCATATATTTC +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLRVRDP*PDVIYF
Trigger: GAAATATATGACATCAGGGCAGGGGTCTCTAACCCT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGAAGTCTCTGGATATTaGAGGCAACGCCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWEVSGY*RQRQRD
Trigger: GTCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAACAAGAGCTGGAATGTaGAGCAGCCCCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELETRAGM*SSPTSS
Trigger: AGAGGAAGTGGGGCTGCTCCACATTCCAGCTCTTGT...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGGACTCAGTTTCTCCTaGACTGGAGATACAGGTTCG +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIGLSFS*TGDTGS
Trigger: CGAACCTGTATCTCCAGTCCAGGAGAAACTGAGTCC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGCTTCTAGCCTTTTCTaGATCCCCAGATATATGGTT +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLASSLF*IPRYMV
Trigger: AACCATATATCTGGGGATCCAGAAAAGGCTAGAAGC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTTCCCTGGACCTTGTaGGAATTATTTAATCCTATA +
Preference number: 4 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVPWTL*ELFNPI
Trigger: TATAGGATTAAATAATTCCCACAAGGTCCAGGGAAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGGTAATTTGAACTGCTaGTGGCATCTGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEGNLNC*WHLQRW
Trigger: CCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAGCGAAACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLAKLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTTTCGC...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGCTCTGGGGGCGAAACTaGCAGTTTGGAGTCATATTG +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWLWGRN*QFGVIL
Trigger: CAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAG...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGGCTCCAACTTATTGTaGTGTGGAGGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWGSNLL*CGGTLW
Trigger: CCAGAGTGTTCCTCCACACCACAATAAGTTGGAGCC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAACTGGTAGACTGGTCTTaGGCAGTAGGCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELELVDWS*AVGWFI
Trigger: GATGAACCAGCCTACTGCCCAAGACCAGTCTACCAG...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGGTCTTCTTGCACAGCTaGTGTCATGTTGTCATACTG +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLVFLHS*CHVVIL
Trigger: CAGTATGACAACATGACACCAGCTGTGCAAGAAGAC...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTGTCTGGCATCCCTTTaGACCCATAATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCCLASL*THNLTG
Trigger: GCCAGTTAGATTATGGGTCCAAAGGGATGCCAGACA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTGTTATGGTAGTTGCTTaGCTCAGAAGTGTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LSFLKENTVDDSVLALKCVMVVA*LRSVWH
Trigger: ATGCCAGACACTTCTGAGCCAAGCAACTACCATAAC...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGTCTGTCCAGATCTTTaGGAAGCCTCACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLVCPDL*EASLPC
Trigger: ACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGAC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 72 bp TTCCACTTCCATGACCATAACGCTCCATGCCAACACTaGAAAATAACATTCAGTTCCTGTGTTTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FHFHDHNAPCQH*KITFSSCVCEV
Trigger: GACCTCACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTCATGGAAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 72 bp TCAGGATTATACCACCACTTGGCTCTTCCTTTTGAATaGCATCTGTGTGTGTGTGTACGCATATATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SGLYHHLALPFE*HLCVCVRIYAC
Trigger: ACAGGCATATATGCGTACACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
3UTR CAA 72 bp GACTCAGAGATTTACCTGTTTCTGCTTCTCAAGCTCTaGAATTTCAGGATTATACCACCACTTGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DSEIYLFLLLKL*NFRIIPPLGSS
Trigger: GGAAGAGCCAAGTGGTGGTATAATCCTGAAATTCAAGAGCTTGAGAAGCAGAAACAGGTAAATCTCTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTCGCATGCATATTTGTaGTGGAGCAATAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLSHAYL*WSNSLL
Trigger: TAGCAGACTATTGCTCCATCACAAATATGCATGCGA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAAAGAGCACATCCACATaGTTGAGAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLKSTST*LRMNST
Trigger: TGTTGAATTCATTCTCAATCATGTGGATGTGCTCTT...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACATGGCTTTCATTTCTaGGGGCTCACTTTCATTACG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLHGFHF*GLTFIT
Trigger: CGTAATGAAAGTGAGCCCTCAGAAATGAAAGCCATG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGGCTCAAGTCCAGGGTaGAAAACGGACTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEGSSPG*KTDSVS
Trigger: AGAAACTGAGTCCGTTTTTCACCCTGGACTTGAGCC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGATTGTCATAGGAATTaGACCGGTTCCCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEDCHRN*TGSPAR
Trigger: ACGTGCTGGGGAACCGGTGCAATTCCTATGACAATC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGCTACCACCTGCTTCTaGATCCTTCTTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEATTCF*ILLTGT
Trigger: AGTCCCAGTAAGAAGGATGCAGAAGCAGGTGGTAGC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTCACCTTTCAAAGCCATaGCTTTCATTTCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCHLSKP*LSFLRA
Trigger: AGCCCTCAGAAATGAAAGCCATGGCTTTGAAAGGTG...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTATTAAGTCTACTTGGTaGAGTTGCTCCCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCIKSTW*SCSPES
Trigger: TGACTCTGGGGAGCAACTCCACCAAGTAGACTTAAT...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGTAAGTTCTGAGGAATaGTGGGGTTTATCCACACTG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLVSSEE*WGLSTL
Trigger: CAGTGTGGATAAACCCCACCATTCCTCAGAACTTAC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGATGCAAACAGTTTTCTaGACCAAAGGGCTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWMQTVF*TKGLCG
Trigger: ACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCAT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGGCGAAACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLAKLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTTTCGC...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAACTGGGAGGACTGGTATaGCTTATACTGGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELELGGLV*LILVDW
Trigger: CCAGTCTACCAGTATAAGCCATACCAGTCCTCCCAG...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGTTATGGTAGTTGCTTaGCTCAGAAGTGTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCVMVVA*LRSVWH
Trigger: ATGCCAGACACTTCTGAGCCAAGCAACTACCATAAC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATATTCATCCGTTGCTGCTaGAACAGCATCAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIFIRCC*NSIREL
Trigger: AAGTTCTCTGATGCTGTTTCAGCAGCAACGGATGAA...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGAGGGTTAGAGACCCCTaGCCTGATGTCATATATTTC +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWRVRDP*PDVIYF
Trigger: GAAATATATGACATCAGGGCAGGGGTCTCTAACCCT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATCACCGTCAACTGCATaGAGAGAAGTAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESPSTA*REVRDS
Trigger: AGAGTCCCTTACTTCTCTCCATGCAGTTGACGGTGA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGCTTCTAGCCTTTTCTaGATCCCCAGATATATGGTT +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLASSLF*IPRYMV
Trigger: AACCATATATCTGGGGATCCAGAAAAGGCTAGAAGC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGAGTTCTGAGGAATGGTaGGGTTTATCCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWSSEEW*GLSTLV
Trigger: TACCAGTGTGGATAAACCCCACCATTCCTCAGAACT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGTAAGTTCTGAGGAATaGTGGGGTTTATCCACACTG +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWVSSEE*WGLSTL
Trigger: CAGTGTGGATAAACCCCACCATTCCTCAGAACTTAC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATATCAACAACCACAGACTaGATCCTCACTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEISTTTD*ILTSMK
Trigger: TTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGA...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATCAGGGAAACTTCCATaGTCATCAGACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESGKLP*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGGAAGTTTCCCTGA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR TCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGTTTGTCTGTAAGTTCTaGGGAATGGTGGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWFVCKF*GMVGFI
Trigger: GATAAACCCCACCATTCCTCAGAACTTACAGACAAA...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATATTCAAGATGCCCCGCTaGTTTAGCTTCTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEIFKMPR*FSFCFV
Trigger: AACAAAACAGAAGCTAAAGCAGCGGGGCATCTTGAA...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGCAAGGTTTTTCGCATaGATATTTGTGATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLARFFA*IFVMEQ
Trigger: TTGCTCCATCACAAATATGCATGCGAAAAACCTTGC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAAGTTCTGAGGAATGGTaGGGTTTATCCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESSEEW*GLSTLV
Trigger: TACCAGTGTGGATAAACCCCACCATTCCTCAGAACT...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
3UTR CAA 72 bp GAATTTCAGGATTATACCACCACTTGGCTCTTCCTTTaGAATTGCATCTGTGTGTGTGTGTACGCATATATG +
Preference number: 4 (lower is better)
Translates to: EFQDYTTTWLFL*NCICVCVYAYM
Trigger: CATATATGCGTACACACACACACAGATGCAATTCAAAAGGAAGAGCCAAGTGGTGGTATAATCCTGAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGTCATGTTGTCATACTaGGACATGATAGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEVMLSY*DMIGPF
Trigger: AAAAGGGCCTATCATGTCGCAGTATGACAACATGAC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR GCA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTACTCATAATGAAAATGTaGACATTCAGCCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLLIMKM*TFSHLW
Trigger: CCAAAGATGGCTGAATGTGCACATTTTCATTATGAG...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATATGCTGGATGACATCATaGATTTTTATCAACCGTTCT +
Preference number: 4 (lower is better)
Translates to: FQISALDFIVTLWSIWEICWMTS*IFINRS
Trigger: AGAACGGTTGATAAAAATCCATGATGTCATCCAGCA...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CCA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGTTCCCTGGACCTTGTaGGAATTATTTAATCCTATA +
Preference number: 4 (lower is better)
Translates to: FRILDSFVERDNESRKEWVPWTL*ELFNPI
Trigger: TATAGGATTAAATAATTCCCACAAGGTCCAGGGAAC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS TCA 90 bp GAGCAGAGGCGCCCATGGGACACTGGGCAGCAGCAGTGCCATCACTaGGGAAGATGGGTGCGGGGTCACCCATGGCCCGAGACTCAGGTG +
Preference number: 5 (lower is better)
Translates to: EQRRPWDTGQQQCHH*GRWVRGHPWPETQV
Trigger: CACCTGAGTCTCGGGCCATGGGTGACCCCGCACCCATCTTCCTCAGTGATGGCACTGCTGCTGCCCAGTGTCCCATGGGCGCCTCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CATGGGACACTGGGCAGCAGCAGTGCCATCACTGAGGAAGATGGGTaGGGGGTCACCCATGGCCCGAGACTCAGGTGGCCTCTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: HGTLGSSSAITEEDG*GVTHGPRLRWPLGS
Trigger: GCTCCCGAGAGGCCACCTGAGTCTCGGGCCATGGGTGACCCCGCACCCATCTTCCTCAGTGATGGCACTGCTGCTGCCCAGTGTCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CAGGAAGGCCCCCTGACCCAATGCTGTGGCGTATGTCCTGCTCTGTaGATGGACAAAGCCAGAGGGCACATAGGCCCCCATGCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: QEGPLTQCCGVCPAL*MDKARGHIGPHARP
Trigger: GGGGCGGGCATGGGGGCCTATGTGCCCTCTGGCTTTGTCCATCCACAGAGCAGGACATACGCCACAGCATTGGGTCAGGGGGCCTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CAGCAGCCGAGGGCTGCTCAGCCAGGACCCTGCTGGCCTCGCTGTTaGTCGGTTCCGCTCTTGCTGGAGTTGCCATCATGTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: QQPRAAQPGPCWPRC*SVPLLLELPSCKPW
Trigger: CCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp TGGCAGCCACAAAATCAGCAGCCGAGGGCTGCTCAGCCAGGACCCTaGTGGCCTCGCTGTTGCTCGGTTCCGCTCTTGCTGGAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: WQPQNQQPRAAQPGP*WPRCCSVPLLLELP
Trigger: TGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTGATTTTGTGGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CTGTGGGCAGGAAGGCCCCCTGACCCAATGCTGTGGCGTATGTCCTaGTCTGTGGATGGACAAAGCCAGAGGGCACATAGGCCCCCATGC +
Preference number: 5 (lower is better)
Translates to: LWAGRPPDPMLWRMS*SVDGQSQRAHRPPC
Trigger: GCATGGGGGCCTATGTGCCCTCTGGCTTTGTCCATCCACAGAGCAGGACATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGCTCCCCAGAGTCAGTaGTGTTGGACTGGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRAPQSQ*CWTGWD
Trigger: GTCCCACCCAGTCCAACACAACTGACTCTGGGGAGC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS CCA 90 bp CTTCCTGTAGAAACGCTCGTCCCCCTCAGGACTGACAGCCTTGGCTaGGTGCCGTCCCTCTTTCCCCTCTGCCACAGAGAGAAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: LPVETLVPLRTDSLG*VPSLFPLCHREKSS
Trigger: ACTGGACTTCTCTCTGTGGCAGAGGGGAAAGAGGGACGGCACCCAGCCAAGGCTGTCAGTCCTGAGGGGGACGAGCGTTTCTACAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TCTCAGGGCCAGGTGGCTGCCTGGCTCGAGGTCTGTCCAGATCTTTaGGAAGCCTCACTTCCTTGTGGTTCAGGGTTAGAGACCCCTGCC +
Preference number: 5 (lower is better)
Translates to: SQGQVAAWLEVCPDL*EASLPCGSGLETPA
Trigger: GGCAGGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGCAGGGACTTGGGCCTaGACAGAGAAGCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRAGTWA*TEKLLL
Trigger: AAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCTGC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS TCA 90 bp GTGTCGGGATGTGGCAAGGACAACTCTGTGGGCAGGAAGGCCCCCTaGCCCAATGCTGTGGCGTATGTCCTGCTCTGTGGATGGACAAAG +
Preference number: 5 (lower is better)
Translates to: VSGCGKDNSVGRKAP*PNAVAYVLLCGWTK
Trigger: CTTTGTCCATCCACAGAGCAGGACATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCCCACAGAGTTGTCCTTGCCACATCCCGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CTCAGCCAGGACCCTGCTGGCCTCGCTGTTGCTCGGTTCCGCTCTTaGTGGAGTTGCCATCATGTAAGCCATGGTGGCTGTGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: LSQDPAGLAVARFRS*WSCHHVSHGGCAGI
Trigger: AATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp AGTCAGGTCTCCAGGGATCTCAGGGACATCTGCTCCTCTTGCCATTaGGCTGAGTGTTTCCTCCCAATCAGGCCGCTCTCGGGGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SQVSRDLRDICSSCH*AECFLPIRPLSGVN
Trigger: GTTCACCCCCGAGAGCGGCCTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCCCTGGAGACCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS CCA 90 bp AGCCAGGACCCTGCTGGCCTCGCTGTTGCTCGGTTCCGCTCTTGCTaGAGTTGCCATCATGTAAGCCATGGTGGCTGTGCTGGAATTCTC +
Preference number: 5 (lower is better)
Translates to: SQDPAGLAVARFRSC*SCHHVSHGGCAGIL
Trigger: GAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp ATTCTGCATGGATCTGCGTGTCGGGATGTGGCAAGGACAACTCTGTaGGCAGGAAGGCCCCCTGACCCAATGCTGTGGCGTATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: ILHGSACRDVARTTL*AGRPPDPMLWRMSC
Trigger: GCAGGACATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCCCACAGAGTTGTCCTTGCCACATCCCGACACGCAGATCCATGCAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCAGGACTGACAGCCTaGGCTGGGTGCCGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSGLTA*AGCRPS
Trigger: AGAGGGACGGCACCCAGCCAAGGCTGTCAGTCCTGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp GGTCTCCAGGGATCTCAGGGACATCTGCTCCTCTTGCCATTGCGCTaGGTGTTTCCTCCCAATCAGGCCGCTCTCGGGGGTGAACATTTC +
Preference number: 5 (lower is better)
Translates to: GLQGSQGHLLLLPLR*VFPPNQAALGGEHF
Trigger: GAAATGTTCACCCCCGAGAGCGGCCTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCCCTGGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS GCA 90 bp CTGCTCCTGTCTGACTCTGTCCAGACGGTACAGCCTTGCTCTGACTaGTCAGGACAGGCCGCTCCTCTGTCCCTGGCAACTCTACTTCTT +
Preference number: 5 (lower is better)
Translates to: LLLSDSVQTVQPCSD*SGQAAPLSLATLLL
Trigger: AAGAAGTAGAGTTGCCAGGGACAGAGGAGCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTGGACAGAGTCAGACAGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CTTAAGAGTCAGGTCTCCAGGGATCTCAGGGACATCTGCTCCTCTTaGCATTGCGCTGAGTGTTTCCTCCCAATCAGGCCGCTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LKSQVSRDLRDICSS*HCAECFLPIRPLSG
Trigger: CCCCGAGAGCGGCCTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCCCTGGAGACCTGACTCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS CCA 90 bp TTGGACTGGGTGGGACCTCCCATAGCTGCTGCCTCAGGGAGAGGCTaGTTACAGTTTCCGAGTCCATTGATCTGCGGGTGGAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: LDWVGPPIAAASGRG*LQFPSPLICGWNCS
Trigger: AGAGCAGTTCCACCCGCAGATCAATGGACTCGGAAACTGTAACCAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCCACCCAGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CAAGGCAGCAGCCATCTTGCTCTCCATTGTCCGTGTTGGGGGAACTaGGGCAGCAAAGCCACAGGAATGGCCAGGAAAAGACTCAGCACG +
Preference number: 5 (lower is better)
Translates to: QGSSHLALHCPCWGN*GSKATGMARKRLST
Trigger: CGTGCTGAGTCTTTTCCTGGCCATTCCTGTGGCTTTGCTGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCTGCTGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GCTGCCATACCCTCCATGATGGTGGGCTCTGTCAAATTCGGACTCTaGGTGCTTCCTGTAGAAACGCTCGTCCCCCTCAGGACTGACAGC +
Preference number: 5 (lower is better)
Translates to: AAIPSMMVGSVKFGL*VLPVETLVPLRTDS
Trigger: GCTGTCAGTCCTGAGGGGGACGAGCGTTTCTACAGGAAGCACCCAGAGTCCGAATTTGACAGAGCCCACCATCATGGAGGGTATGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGATGGCTTAGAAGACTaGTCGTCAGTGGGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRDGLED*SSVGLK
Trigger: CTTGAGCCCCACTGACGACAAGTCTTCTAAGCCATC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGGTCTACTTGGTGGAGTaGCTCCCCAGAGTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRVYLVE*LPRVSC
Trigger: ACAACTGACTCTGGGGAGCAACTCCACCAAGTAGAC...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS GCA 90 bp GTTCCGCTCTTGCTGGAGTTGCCATCATGTAAGCCATGGTGGCTGTaGTGGAATTCTCTTCAGGGGACCCAGAGAGAGGGTGGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VPLLLELPSCKPWWL*WNSLQGTQREGGGL
Trigger: AAGCCCACCACCCTCTCTCTGGGTCCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GGCTGCTTTGCTTCTGCGGGAGGGATGGCTTTTCTGCCTGTGTGCTaGCATACCCTCCATGATGGTGGGCTCTGTCAAATTCGGACTCTG +
Preference number: 5 (lower is better)
Translates to: GCFASAGGMAFLPVC*HTLHDGGLCQIRTL
Trigger: CAGAGTCCGAATTTGACAGAGCCCACCATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAGCAAAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp AAGTCTACTTGGTGGAGTTGCTCCCCAGAGTCAGTTGTGTTGGACTaGGTGGGACCTCCCATAGCTGCTGCCTCAGGGAGAGGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: KSTWWSCSPESVVLD*VGPPIAAASGRGWL
Trigger: TAACCAGCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCCACCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CCGCTCTTGCTGGAGTTGCCATCATGTAAGCCATGGTGGCTGTGCTaGAATTCTCTTCAGGGGACCCAGAGAGAGGGTGGTGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: PLLLELPSCKPWWLC*NSLQGTQREGGGLC
Trigger: ACAAAGCCCACCACCCTCTCTCTGGGTCCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TGCTCGGTTCCGCTCTTGCTGGAGTTGCCATCATGTAAGCCATGGTaGCTGTGCTGGAATTCTCTTCAGGGGACCCAGAGAGAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: CSVPLLLELPSCKPW*LCWNSLQGTQREGG
Trigger: ACCACCCTCTCTCTGGGTCCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GCAGCAAAGCCACAGGAATGGCCAGGAAAAGACTCAGCACGTAAGTaGAGTGGTGGAGCCCTGCTGCTTTCCCGAACCTTCTCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: AAKPQEWPGKDSARK*SGGALLLSRTFSGS
Trigger: ACTGCCTGAGAAGGTTCGGGAAAGCAGCAGGGCTCCACCACTCCACTTACGTGCTGAGTCTTTTCCTGGCCATTCCTGTGGCTTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CCACTGAGGCTGACGAAGGGACAAAGGAGTGGTAATTTGAACTGCTaGTGGCATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: PLRLTKGQRSGNLNC*WHLQRWSARQQPSC
Trigger: GCAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCTCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CCGAGGAGCCCAGAGAAGAGACATACTCAACCCGACTACACGGCTTaGAGTGGTGTCCAGACATGTTTCTTCCCGGCGCCACATAGGTGT +
Preference number: 5 (lower is better)
Translates to: PRSPEKRHTQPDYTA*SGVQTCFFPAPHRC
Trigger: ACACCTATGTGGCGCCGGGAAGAAACATGTCTGGACACCACTCCAAGCCGTGTAGTCGGGTTGAGTATGTCTCTTCTCTGGGCTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GGCAGTAGGCTGGTTCATCATCTGGGGGAACTTCTGTCCGTGAAATaGGAACAGAGCGGATCATGGAAGGTGGGGGTGCATGGAGGGACT +
Preference number: 5 (lower is better)
Translates to: GSRLVHHLGELLSVK*EQSGSWKVGVHGGT
Trigger: AGTCCCTCCATGCACCCCCACCTTCCATGATCCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAACCAGCCTACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CGTTCTTTCCTTGTAGCCTTGGATTGTAGAAAGCAAAGTCCCGACTaGACAGGCGGTGGAGGGGCCGCAGCTGGACTGTGCCATAGGCAT +
Preference number: 5 (lower is better)
Translates to: RSFLVALDCRKQSPD*TGGGGAAAGLCHRH
Trigger: ATGCCTATGGCACAGTCCAGCTGCGGCCCCTCCACCGCCTGTCCAGTCGGGACTTTGCTTTCTACAATCCAAGGCTACAAGGAAAGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CCTTGTAGCAGTCTCTGGAGTGTTTCTCAGGGCCAGGTGGCTGCCTaGCTCGAGGTCTGTCCAGATCTTTGGGAAGCCTCACTTCCTTGT +
Preference number: 5 (lower is better)
Translates to: PCSSLWSVSQGQVAA*LEVCPDLWEASLPC
Trigger: ACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAAACACTCCAGAGACTGCTACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp GCCACTCCGATGTCTGGTGGACTCAAGTCAACATCCTCAGCCGAATaGGGAGACACAAGAGCTGGAATGTGGAGCAGCCCCACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ATPMSGGLKSTSSAE*GDTRAGMWSSPTSS
Trigger: AGAGGAAGTGGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGTTGACTTGAGTCCACCAGACATCGGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp TCTTGGGCAGTAGGCTGGTTCATCATCTGGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGGATCATGGAAGGTGGGGGTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: SWAVGWFIIWGNFCP*NGNRADHGRWGCME
Trigger: CTCCATGCACCCCCACCTTCCATGATCCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAACCAGCCTACTGCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp AAGGCTAGAGTAGGAACTAGGCAGCTTCTCTTCAGATGGAACGACTaGCGTGTCTCCATAACTAGTGCACCCAGCCTGGGAAGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KARVGTRQLLFRWND*RVSITSAPSLGSPW
Trigger: CCAGGGGCTTCCCAGGCTGGGTGCACTAGTTATGGAGACACGGCAGTCGTTCCATCTGAAGAGAAGCTGCCTAGTTCCTACTCTAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CATCCACTGAGGCTGACGAAGGGACAAAGGAGTGGTAATTTGAACTaGTGGTGGCATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCATCT +
Preference number: 5 (lower is better)
Translates to: HPLRLTKGQRSGNLN*WWHLQRWSARQQPS
Trigger: AGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCTCAGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TGTTGCTCGGTTCCGCTCTTGCTGGAGTTGCCATCATGTAAGCCATaGTGGCTGTGCTGGAATTCTCTTCAGGGGACCCAGAGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: CCSVPLLLELPSCKP*WLCWNSLQGTQREG
Trigger: ACCCTCTCTCTGGGTCCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CTGAGGCTGACGAAGGGACAAAGGAGTGGTAATTTGAACTGCTGGTaGCATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCATCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LRLTKGQRSGNLNCW*HLQRWSARQQPSCS
Trigger: AGAGCAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp ACATGTTTCTTCCCGGCGCCACATAGGTGTTATAACGAGGACCCATaGAGGCTGGTGGCTCTGACCGGGCACCATATACCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: TCFFPAPHRCYNEDP*RLVALTGHHIPDVA
Trigger: AGCCACATCAGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATAACACCTATGTGGCGCCGGGAAGAAACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GTGAAGCTTTCTGTTCCTAAGGCTGCTTTGCTTCTGCGGGAGGGATaGCTTTTCTGCCTGTGTGCTGCCATACCCTCCATGATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VKLSVPKAALLLREG*LFCLCAAIPSMMVG
Trigger: GCCCACCATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAACAGAAAGCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGCAGGGACTTGGGCCTaGACAGAGAAGCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAAGTWA*TEKLLL
Trigger: AAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCTGC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGAGACCAGCAGGGACTaGGGCCTTGACAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGETSRD*GLDREA
Trigger: AGCTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCTC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCAGTTTCCGAGTCCATaGATCTGCGGGTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGQFPSP*ICGWNC
Trigger: GCAGTTCCACCCGCAGATCAATGGACTCGGAAACTG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCCGCTCTTGCTGGAGTaGCCATCATGTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGPLLLE*PSCKPW
Trigger: CCATGGCTTACATGATGGCAACTCCAGCAAGAGCGG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACCCGACTACACGGCTaGGAGTGGTGTCCAGACATG +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGTRLHG*EWCPDM
Trigger: CATGTCTGGACACCACTCCAAGCCGTGTAGTCGGGT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CCACTGTCTAGGGTGAGATGGGCCGAGAAAACCAGAGGGAAGCTGGGCCAGAGGAGTTATGGTAGTTGCTaGGCTCAGAAGTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PLSRVRWAEKTRGKLGQRSYGSC*AQKCLA
Trigger: TGCCAGACACTTCTGAGCCAAGCAACTACCATAACT...CCTCTGGCCCAGCTTCCCTCTGGTTTTCTCGGCCCATCTCACCCTAGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS TCA 90 bp CGCCACATAGGTGTTATAACGAGGACCCATGGAGGCTGGTGGCTCTaGCCGGGCACCATATACCTGATGTGGCTCCAACTTATTGTGGTG +
Preference number: 5 (lower is better)
Translates to: RHIGVITRTHGGWWL*PGTIYLMWLQLIVV
Trigger: CACCACAATAAGTTGGAGCCACATCAGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATAACACCTATGTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GACTCAGTTTCTCCTGGACTGGAGATACAGGTTCGGAACTTGCGGTaGTTCCTGGAGTCTGTGACTGGCTACCACCTGCTTCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: DSVSPGLEIQVRNLR*FLESVTGYHLLLHP
Trigger: AGGATGCAGAAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GGAGTGGAGACTGGTCCTGCTCCAAAAAGGAGACAGTGGACACGCTaGTCTTCCCAGCGTGGTCTTCAGGGAAACTTCCATGATCATCAG +
Preference number: 5 (lower is better)
Translates to: GVETGPAPKRRQWTR*SSQRGLQGNFHDHQ
Trigger: CTGATGATCATGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCTCCTTTTTGGAGCAGGACCAGTCTCCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp TCTGTTCCTAAGGCTGCTTTGCTTCTGCGGGAGGGATGGCTTTTCTaGCTGTGTGCTGCCATACCCTCCATGATGGTGGGCTCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: SVPKAALLLREGWLF*LCAAIPSMMVGSVK
Trigger: TTTGACAGAGCCCACCATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp CCAGGTTATCATACTGGGACACAACAGTCATGCTGCTCTGGCGCTTaGTGTGTGTCTGATACTGGTATAGCACGCTGGGGTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PGYHTGTQQSCCSGA*CVSDTGIARWGPSP
Trigger: TGGAGAGGGACCCCAGCGTGCTATACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCCAGTATGATAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TCAGTGGGGCTCAAGTCCAGGGTGAAAAACGGACTCAGTTTCTCCTaGACTGGAGATACAGGTTCGGAACTTGCGGTGCTTCCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SVGLKSRVKNGLSFS*TGDTGSELAVLPGV
Trigger: GACTCCAGGAAGCACCGCAAGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTGAGTCCGTTTTTCACCCTGGACTTGAGCCCCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GGTACCAAGGTAAGAGAGGGGCTGATCTCCACAGGAGAAATGGAGTaGAGACTGGTCCTGCTCCAAAAAGGAGACAGTGGACACGCTGCT +
Preference number: 5 (lower is better)
Translates to: GTKVREGLISTGEME*RLVLLQKGDSGHAA
Trigger: AGCAGCGTGTCCACTGTCTCCTTTTTGGAGCAGGACCAGTCTCCACTCCATTTCTCCTGTGGAGATCAGCCCCTCTCTTACCTTGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GGACAAAGGAGTGGTAATTTGAACTGCTGGTGGCATCTGCAGCGCTaGAGTGCAAGGCAGCAGCCATCTTGCTCTCCATTGTCCGTGTTG +
Preference number: 5 (lower is better)
Translates to: GQRSGNLNCWWHLQR*SARQQPSCSPLSVL
Trigger: CAACACGGACAATGGAGAGCAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp AGGCATCGACATCACACAAGGCCCCCTCAGGACTGTAATAGGAGCTaGAGGAGCTGGAGTACGGACTATAGCGATAATGGACCCGTCCAT +
Preference number: 5 (lower is better)
Translates to: RHRHHTRPPQDCNRS*RSWSTDYSDNGPVH
Trigger: ATGGACGGGTCCATTATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTCCTGAGGGGGCCTTGTGTGATGTCGATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TGCTGCTCTGGCGCTTGCTGTGTGTCTGATACTGGTATAGCACGCTaGGGTCCCTCTCCAGGTTCTGGGTATGGTGAAGTTTTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: CCSGACCVSDTGIAR*GPSPGSGYGEVLGC
Trigger: ACAGCCTAAAACTTCACCATACCCAGAACCTGGAGAGGGACCCCAGCGTGCTATACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCTCCAATGTCAGCAGCTaGGTAGATGGAGACGAGACC +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGSNVSS*VDGDET
Trigger: GGTCTCGTCTCCATCTACCAAGCTGCTGACATTGGA...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCCTGAGCCTGCGTCCTaGCCTGGGCTTCCTCCAATG +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPPEPAS*PGLPPM
Trigger: CATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAGG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCAGTTTCCGAGTCCATaGATCTGCGGGTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGQFPSP*ICGWNC
Trigger: GCAGTTCCACCCGCAGATCAATGGACTCGGAAACTG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCAGTTTCCGAGTCCATaGATCTGCGGGTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: REAGPEVPHPKPSKECNFQFPSP*ICGWNC
Trigger: GCAGTTCCACCCGCAGATCAATGGACTCGGAAACTG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGCTCCCCAGAGTCAGTaGTGTTGGACTGGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRAPQSQ*CWTGWD
Trigger: GTCCCACCCAGTCCAACACAACTGACTCTGGGGAGC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCGCTCTTGCTGGAGTaGCCATCATGTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGPLLLE*PSCKPW
Trigger: CCATGGCTTACATGATGGCAACTCCAGCAAGAGCGG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGACCCGACTACACGGCTaGGAGTGGTGTCCAGACATG +
Preference number: 5 (lower is better)
Translates to: TFSEFTAASKLTTGSPALTRLHG*EWCPDM
Trigger: CATGTCTGGACACCACTCCAAGCCGTGTAGTCGGGT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCACTGGTAGACTGGTCTaGGGCAGTAGGCTGGTTCAT +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGTGRLV*GSRLVH
Trigger: ATGAACCAGCCTACTGCCCAAGACCAGTCTACCAGT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAGGGCAGGCCCACAGTaGATCTTGTTGCCAGCGATA +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGRAGPQ*ILLPAI
Trigger: TATCGCTGGCAACAAGATCAACTGTGGGCCTGCCCT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS TCA 90 bp ACCGTCAACTGCATGGAGAGAAGTAAGGGACTCTTCACTTTTAGCTaGGCGGAGGGTTCCTTCTGCCCTGCCACCTTTCAAAGCCATGGC +
Preference number: 5 (lower is better)
Translates to: TVNCMERSKGLFTFS*AEGSFCPATFQSHG
Trigger: GCCATGGCTTTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGCTCAGCTAAAAGTGAAGAGTCCCTTACTTCTCTCCATGCAGTTGACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GGTGTCATGTTGTCATACTGCGACATGATAGGCCCTTTTACCTTCTaGCGTGCTCGGCTCTCTCGGCGGATGGACTGCATGCGGTATTTT +
Preference number: 5 (lower is better)
Translates to: GVMLSYCDMIGPFTF*RARLSRRMDCMRYF
Trigger: AAAATACCGCATGCAGTCCATCCGCCGAGAGAGCCGAGCACGGCAGAAGGTAAAAGGGCCTATCATGTCGCAGTATGACAACATGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TGGACTCAAGTCAACATCCTCAGCCGAATGAGGAGACACAAGAGCTaGAATGTGGAGCAGCCCCACTTCCTCTTCACTCTCGTTGTCGTG +
Preference number: 5 (lower is better)
Translates to: WTQVNILSRMRRHKS*NVEQPHFLFTLVVV
Trigger: CACGACAACGAGAGTGAAGAGGAAGTGGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGTTGACTTGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TCAGGGAGAGGCTGGTTACAGTTTCCGAGTCCATTGATCTGCGGGTaGAACTGCTCTGCTGGCCGGTCCGTTTGGAAACAGGTTTTATCT +
Preference number: 5 (lower is better)
Translates to: SGRGWLQFPSPLICG*NCSAGRSVWKQVLS
Trigger: AGATAAAACCTGTTTCCAAACGGACCGGCCAGCAGAGCAGTTCCACCCGCAGATCAATGGACTCGGAAACTGTAACCAGCCTCTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp AGGAGAAATGGAGTGGAGACTGGTCCTGCTCCAAAAAGGAGACAGTaGACACGCTGCTCTTCCCAGCGTGGTCTTCAGGGAAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: RRNGVETGPAPKRRQ*TRCSSQRGLQGNFH
Trigger: ATGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCTCCTTTTTGGAGCAGGACCAGTCTCCACTCCATTTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTTCCAATGTCAGCAGCTaGGTAGATGGAGACGAGACC +
Preference number: 5 (lower is better)
Translates to: REAGPEVPHPKPSKECNFSNVSS*VDGDET
Trigger: GGTCTCGTCTCCATCTACCAAGCTGCTGACATTGGA...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAATACAGGTTCGGAACTaGCGGTGCTTCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAIQVRN*RCFLES
Trigger: AGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTAT...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGTCTACTTGGTGGAGTaGCTCCCCAGAGTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGVYLVE*LPRVSC
Trigger: ACAACTGACTCTGGGGAGCAACTCCACCAAGTAGAC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCAGAGAAATAGCCAGTaGCATTGGCCCGTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRQRNSQ*HWPVGV
Trigger: CACGCCCACGGGCCAATGCAACTGGCTATTTCTCTG...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCATAATTGCCTATGGCTaGCTTCCTGATGCGCCCTGT +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGIIAYG*LPDAPC
Trigger: ACAGGGCGCATCAGGAAGCAAGCCATAGGCAATTAT...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGGTCTGTCCAGATCTTaGGGAAGCCTCACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGGLSRS*GSLTSL
Trigger: CAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp ACGCTGTGCAGCTCTGAAGAACCTGGGGCACTTCAAACCCAGAATTaGGGAGGTGCTCCCCCAAGTCACAACCGAATACTCTCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TLCSSEEPGALQTQN*GGAPPSHNRILSLS
Trigger: TGAAAGAGAGAGTATTCGGTTGTGACTTGGGGGAGCACCTCCTCAATTCTGGGTTTGAAGTGCCCCAGGTTCTTCAGAGCTGCACAGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
ENSMUST00000183121.2
CDS TCA 90 bp CCGTCCATTCTCAAAGTAAGGCTGAAGCTGAGTTACGTGATAGTCTaGGCGGGCCTGGGAGGACTGGTATGGCTTATACTGGTAGACTGG +
Preference number: 5 (lower is better)
Translates to: PSILKVRLKLSYVIV*AGLGGLVWLILVDW
Trigger: CCAGTCTACCAGTATAAGCCATACCAGTCCTCCCAGGCCCGCTCAGACTATCACGTAACTCAGCTTCAGCCTTACTTTGAGAATGGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp ATCCCTCCCAAGTCTTCTTGCACAGCTGGTGTCATGTTGTCATACTaGGACATGATAGGCCCTTTTACCTTCTGCCGTGCTCGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: IPPKSSCTAGVMLSY*DMIGPFTFCRARLS
Trigger: AGAGAGCCGAGCACGGCAGAAGGTAAAAGGGCCTATCATGTCGCAGTATGACAACATGACACCAGCTGTGCAAGAAGACTTGGGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GGGAGTGGTAATCCTCCAGGTTATCATACTGGGACACAACAGTCATaGTGCTCTGGCGCTTGCTGTGTGTCTGATACTGGTATAGCACGC +
Preference number: 5 (lower is better)
Translates to: GSGNPPGYHTGTQQS*CSGACCVSDTGIAR
Trigger: GCGTGCTATACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCCAGTATGATAACCTGGAGGATTACCACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CATCACACAAGGCCCCCTCAGGACTGTAATAGGAGCTGGAGGAGCTaGAGTACGGACTATAGCGATAATGGACCCGTCCATTCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: HHTRPPQDCNRSWRS*STDYSDNGPVHSQS
Trigger: ACTTTGAGAATGGACGGGTCCATTATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTCCTGAGGGGGCCTTGTGTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CAGAGTTATGGTAGTTGCTTGGCTCAGAAGTGTCTGGCATCCCTTTaGACCCATAATCTAACTGGCCAGCTCCCTGGGGATAAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QSYGSCLAQKCLASL*THNLTGQLPGDKVV
Trigger: GACCACCTTATCCCCAGGGAGCTGGCCAGTTAGATTATGGGTCCAAAGGGATGCCAGACACTTCTGAGCCAAGCAACTACCATAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CTGGCTCGAGGTCTGTCCAGATCTTTGGGAAGCCTCACTTCCTTGTaGTTCAGGGTTAGAGACCCCTGCCCTGATGTCATATATTTCCCA +
Preference number: 5 (lower is better)
Translates to: LARGLSRSLGSLTSL*FRVRDPCPDVIYFP
Trigger: TGGGAAATATATGACATCAGGGCAGGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACCTCGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGCGAAGTCTCTGGATATaGGAGGCAACGCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: TFSEFTAASKLTTGSPALRSLWI*EATPER
Trigger: TCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTCG...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGACCGTTCTTCATCCGTaGCTGCTGAAACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGTVLHP*LLKQHQ
Trigger: CTGATGCTGTTTCAGCAGCAACGGATGAAGAACGGT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCAGGGACTTGGGCCTaGACAGAGAAGCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPAGTWA*TEKLLL
Trigger: AAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCTGC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGGAGGACTTCCCCAAATaGAAAAAGGAACGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGEDFPK*KKERQL
Trigger: CAGCTGGCGTTCCTTTTTCAATTTGGGGAAGTCCTC...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGACCCGACTACACGGCTaGGAGTGGTGTCCAGACATG +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPTRLHG*EWCPDM
Trigger: CATGTCTGGACACCACTCCAAGCCGTGTAGTCGGGT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTTCCTAAGGCTGCTTaGCTTCTGCGGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVPKAA*LLREGW
Trigger: CCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGATAATTGCCTATGGCTaGCTTCCTGATGCGCCCTGT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGIIAYG*LPDAPC
Trigger: ACAGGGCGCATCAGGAAGCAAGCCATAGGCAATTAT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGGGCCCACAGTTGATCTaGTTGCCAGCGATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMGPQLI*LPAIVE
Trigger: TTCAACTATCGCTGGCAACAAGATCAACTGTGGGCC...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS TCA 90 bp GTGGACACGCTGCTCTTCCCAGCGTGGTCTTCAGGGAAACTTCCATaGTCATCAGACTTCTCTGAGTCTGTTAAGGGAGCTGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: VDTLLFPAWSSGKLP*SSDFSESVKGAEVL
Trigger: AAGCACTTCAGCTCCCTTAACAGACTCAGAGAAGTCTGATGATCATGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAGCGTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp ACATGGGCAGCACCGACAGCAGGAGTGTTGATGGACGACTCCTCGTaGACTAGAAGATGGTTTCCCTTATTGTCGATCTCCATCCAGGTA +
Preference number: 5 (lower is better)
Translates to: TWAAPTAGVLMDDSS*TRRWFPLLSISIQV
Trigger: TACCTGGATGGAGATCGACAATAAGGGAAACCATCTTCTAGTTCACGAGGAGTCGTCCATCAACACTCCTGCTGTCGGTGCTGCCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS GCA 90 bp ACCTTGTGGGAATTATTTAATCCTATACTTGGTGCTTCTTGTACCTaGCCCACAACTGGTGGCTGCTCTGCAGGCCTCTGGGAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: TLWELFNPILGASCT*PTTGGCSAGLWEGG
Trigger: ACCTCCTTCCCAGAGGCCTGCAGAGCAGCCACCAGTTGTGGGGCAGGTACAAGAAGCACCAAGTATAGGATTAAATAATTCCCACAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GGAACACTCTGGGGGCGAAACTGGCAGTTTGGAGTCATATTGAAATaGAAACAGTTTTCTGGACCAAAGGGCTCTGCGGTGACATCAGGC +
Preference number: 5 (lower is better)
Translates to: GTLWGRNWQFGVILK*KQFSGPKGSAVTSG
Trigger: GCCTGATGTCACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp AGTGGTAATCCTCCAGGTTATCATACTGGGACACAACAGTCATGCTaGTCTGGCGCTTGCTGTGTGTCTGATACTGGTATAGCACGCTGG +
Preference number: 5 (lower is better)
Translates to: SGNPPGYHTGTQQSC*SGACCVSDTGIARW
Trigger: CCAGCGTGCTATACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCCAGTATGATAACCTGGAGGATTACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGAACATAAGGTTCTTTaGTCAGGTCGGGGACATGCT +
Preference number: 5 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAEHKVL*SGRGHA
Trigger: AGCATGTCCCCGACCTGACAAAAGAACCTTATGTTC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTGAACATAAGGTTCTTTaGTCAGGTCGGGGACATGCT +
Preference number: 5 (lower is better)
Translates to: REAGPEVPHPKPSKECNFEHKVL*SGRGHA
Trigger: AGCATGTCCCCGACCTGACAAAAGAACCTTATGTTC...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ACCTTCTCTGAATTCACTGCTGCTTCCAAACTGACAACCGGCTCTCCTGCTCTGACCGTTCTTCATCCGTaGCTGCTGAAACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: TFSEFTAASKLTTGSPALTVLHP*LLKQHQ
Trigger: CTGATGCTGTTTCAGCAGCAACGGATGAAGAACGGT...CAGAGCAGGAGAGCCGGTTGTCAGTTTGGAAGCAGCAGTGAATTCAGAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGATGGCTTAGAAGACTaGTCGTCAGTGGGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRDGLED*SSVGLK
Trigger: CTTGAGCCCCACTGACGACAAGTCTTCTAAGCCATC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCGAAGGCATGGGAGATTaGTCTGTAAGTTCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGEGMGD*SVSSEE
Trigger: TTCCTCAGAACTTACAGACAAATCTCCCATGCCTTC...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CAGGGGAGTGGGAACACAACAAGAAATGCGGAAGCCCACCAGGAAATAGAGGCAGCCGTTCCCTGGACCTaGTGGGAATTATTTAATCCT +
Preference number: 5 (lower is better)
Translates to: QGSGNTTRNAEAHQEIEAAVPWT*WELFNP
Trigger: AGGATTAAATAATTCCCACAAGGTCCAGGGAACGGC...TGCCTCTATTTCCTGGTGGGCTTCCGCATTTCTTGTTGTGTTCCCACTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACAGAGAAATAGCCAGTaGCATTGGCCCGTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLQRNSQ*HWPVGV
Trigger: CACGCCCACGGGCCAATGCAACTGGCTATTTCTCTG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGCAGAGAAATAGCCAGTaGCATTGGCCCGTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVQRNSQ*HWPVGV
Trigger: CACGCCCACGGGCCAATGCAACTGGCTATTTCTCTG...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGTTCCTAAGGCTGCTTaGCTTCTGCGGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVVPKAA*LLREGW
Trigger: CCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAAC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAGTTATGGTAGTTGCTaGGCTCAGAAGTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGSYGSC*AQKCLA
Trigger: TGCCAGACACTTCTGAGCCAAGCAACTACCATAACT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp GGTTCCTTCTGCCCTGCCACCTTTCAAAGCCATGGCTTTCATTTCTaGGGGCTCACTTTCATTACGCTGCAACTTGCGTTTGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: GSFCPATFQSHGFHF*GLTFITLQLAFGDR
Trigger: TCTGTCTCCAAACGCAAGTTGCAGCGTAATGAAAGTGAGCCCTCAGAAATGAAAGCCATGGCTTTGAAAGGTGGCAGGGCAGAAGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp GCACCACTCTCCAGACACTCTGACTCAGCTTTTGGAGGACTACATTaGAATGACATGGGATCAAAGTCCAGACTGGCCACTCCGATGTCT +
Preference number: 5 (lower is better)
Translates to: APLSRHSDSAFGGLH*NDMGSKSRLATPMS
Trigger: AGACATCGGAGTGGCCAGTCTGGACTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGTGTCTGGAGAGTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp GCCATTGCGCTGAGTGTTTCCTCCCAATCAGGCCGCTCTCGGGGGTaGACATTTCTATGTAGCTCTGGAACAAAATCATCCTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: AIALSVSSQSGRSRG*TFLCSSGTKSSSSE
Trigger: TTCTGAAGAGGATGATTTTGTTCCAGAGCTACATAGAAATGTTCACCCCCGAGAGCGGCCTGATTGGGAGGAAACACTCAGCGCAATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS GCA 90 bp TGGTTTCGATGTAGCGAATTCCCTATTAAGTCTACTTGGTGGAGTTaGTCCCCAGAGTCAGTTGTGTTGGACTGGGTGGGACCTCCCATA +
Preference number: 5 (lower is better)
Translates to: WFRCSEFPIKSTWWS*SPESVVLDWVGPPI
Trigger: TATGGGAGGTCCCACCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGGGAATTCGCTACATCGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp GGGCATAGTGACTACATTATGGTCATTACCAGAGAAATAGCCAGTTaGATTGGCCCGTGGGCGTGGAGGCAAACCAGCATAGTTGTACAC +
Preference number: 5 (lower is better)
Translates to: GHSDYIMVITREIAS*IGPWAWRQTSIVVH
Trigger: GTGTACAACTATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGTAATGACCATAATGTAGTCACTATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CTTTTGGAGGACTACATTGAAATGACATGGGATCAAAGTCCAGACTaGCCACTCCGATGTCTGGTGGACTCAAGTCAACATCCTCAGCCG +
Preference number: 5 (lower is better)
Translates to: LLEDYIEMTWDQSPD*PLRCLVDSSQHPQP
Trigger: CGGCTGAGGATGTTGACTTGAGTCCACCAGACATCGGAGTGGCCAGTCTGGACTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CCAGACACTCTGACTCAGCTTTTGGAGGACTACATTGAAATGACATaGGATCAAAGTCCAGACTGGCCACTCCGATGTCTGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: PDTLTQLLEDYIEMT*DQSPDWPLRCLVDS
Trigger: TGAGTCCACCAGACATCGGAGTGGCCAGTCTGGACTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCGAAGTCTCTGGATATaGGAGGCAACGCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPRSLWI*EATPER
Trigger: TCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTCG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTTGATCTCAGCAGGTTaGGTGCCCACACAATGGCAA +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRLISAG*VPTQWQ
Trigger: TTGCCATTGTGTGGGCACCAAACCTGCTGAGATCAA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGATACAGGTTCGGAACTaGCGGTGCTTCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPIQVRN*RCFLES
Trigger: AGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTAT...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCCTTTCTTCCACACTTTaGTCCCAAGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: IEQSTVQQRLLQLYCSRGLSSTL*SQDVGD
Trigger: ATCACCTACATCTTGGGACAAAAGTGTGGAAGAAAG...GCCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCTACTTGGTGGAGTaGCTCCCCAGAGTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPVYLVE*LPRVSC
Trigger: ACAACTGACTCTGGGGAGCAACTCCACCAAGTAGAC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTATACTTGGTGCTTCTaGTACCTGCCCCACAACTGG +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRYTWCF*YLPHNW
Trigger: CCAGTTGTGGGGCAGGTACAAGAAGCACCAAGTATA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTCAGGACTGACAGCCTaGGCTGGGTGCCGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCSGLTA*AGCRPS
Trigger: AGAGGGACGGCACCCAGCCAAGGCTGTCAGTCCTGA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS TCA 90 bp AGAGAAGTCCAGTTTTCCCAGGATCTGATTTGCTGCGCAGATGGATaGCATAGATCCCTCCCAAGTCTTCTTGCACAGCTGGTGTCATGT +
Preference number: 5 (lower is better)
Translates to: REVQFSQDLICCADG*HRSLPSLLAQLVSC
Trigger: ACATGACACCAGCTGTGCAAGAAGACTTGGGAGGGATCTATGTCATCCATCTGCGCAGCAAATCAGATCCTGGGAAAACTGGACTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GCGCAGATGGATGACATAGATCCCTCCCAAGTCTTCTTGCACAGCTaGTGTCATGTTGTCATACTGCGACATGATAGGCCCTTTTACCTT +
Preference number: 5 (lower is better)
Translates to: AQMDDIDPSQVFLHS*CHVVILRHDRPFYL
Trigger: AAGGTAAAAGGGCCTATCATGTCGCAGTATGACAACATGACACCAGCTGTGCAAGAAGACTTGGGAGGGATCTATGTCATCCATCTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGAACATAAGGTTCTTTaGTCAGGTCGGGGACATGCT +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSREHKVL*SGRGHA
Trigger: AGCATGTCCCCGACCTGACAAAAGAACCTTATGTTC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTCCAATGTCAGCAGCTaGGTAGATGGAGACGAGACC +
Preference number: 5 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVSNVSS*VDGDET
Trigger: GGTCTCGTCTCCATCTACCAAGCTGCTGACATTGGA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATACCTGAGCCTGCGTCCTaGCCTGGGCTTCCTCCAATG +
Preference number: 5 (lower is better)
Translates to: FQISALDFIVTLWSIWEIPEPAS*PGLPPM
Trigger: CATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAGG...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTACTCTGACTCAGCTTTaGGAGGACTACATTGAAATG +
Preference number: 5 (lower is better)
Translates to: REAGPEVPHPKPSKECNFTLTQL*EDYIEM
Trigger: CATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGT...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTAATACAGGTTCGGAACTaGCGGTGCTTCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLIQVRN*RCFLES
Trigger: AGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTAT...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AGGGAAGCTGGGCCAGAGGTGCCACATCCCAAACCCAGTAAGGAATGCAACTTTCTTTCTTCCACACTTTaGTCCCAAGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: REAGPEVPHPKPSKECNFLSSTL*SQDVGD
Trigger: ATCACCTACATCTTGGGACAAAAGTGTGGAAGAAAG...AAAGTTGCATTCCTTACTGGGTTTGGGATGTGGCACCTCTGGCCCAGCTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp GAGGATTACAGGAACTCCCTGCATGCACAGCTTTTTACACGGGTGCTGGGGATGCTTTCTTCCACACTTTaGTCCCAAGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: EDYRNSLHAQLFTRVLGMLSSTL*SQDVGD
Trigger: ATCACCTACATCTTGGGACAAAAGTGTGGAAGAAAG...CATCCCCAGCACCCGTGTAAAAAGCTGTGCATGCAGGGAGTTCCTGTAATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGCCGCTCTTGCTGGAGTaGCCATCATGTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLPLLLE*PSCKPW
Trigger: CCATGGCTTACATGATGGCAACTCCAGCAAGAGCGG...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTGTTCCTAAGGCTGCTTaGCTTCTGCGGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: LSFLKENTVDDSVLALKCVPKAA*LLREGW
Trigger: CCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAAC...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGGGTCTGTCCAGATCTTaGGGAAGCCTCACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVGLSRS*GSLTSL
Trigger: CAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACC...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS TCA 90 bp GTCCCTAGGCAAAGTAGAAGGCATGGGAGATTTGTCTGTAAGTTCTaGGGAATGGTGGGGTTTATCCACACTGGTACCAAGGTAAGAGAG +
Preference number: 5 (lower is better)
Translates to: VPRQSRRHGRFVCKF*GMVGFIHTGTKVRE
Trigger: CTCTCTTACCTTGGTACCAGTGTGGATAAACCCCACCATTCCTCAGAACTTACAGACAAATCTCCCATGCCTTCTACTTTGCCTAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CTGGAGTCTGTGACTGGCTACCACCTGCTTCTGCATCCTTCTTACTaGGACTCAGTTTATCCCTGGTATAACCTAATGAATCCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LESVTGYHLLLHPSY*DSVYPWYNLMNPER
Trigger: CCTTTCTGGATTCATTAGGTTATACCAGGGATAAACTGAGTCCCAGTAAGAAGGATGCAGAAGCAGGTGGTAGCCAGTCACAGACTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp GATATATGGTTTCGATGTAGCGAATTCCCTATTAAGTCTACTTGGTaGAGTTGCTCCCCAGAGTCAGTTGTGTTGGACTGGGTGGGACCT +
Preference number: 5 (lower is better)
Translates to: DIWFRCSEFPIKSTW*SCSPESVVLDWVGP
Trigger: AGGTCCCACCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGGGAATTCGCTACATCGAAACCATATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp CCAGATATATGGTTTCGATGTAGCGAATTCCCTATTAAGTCTACTTaGTGGAGTTGCTCCCCAGAGTCAGTTGTGTTGGACTGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PDIWFRCSEFPIKST*WSCSPESVVLDWVG
Trigger: TCCCACCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGGGAATTCGCTACATCGAAACCATATATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 90 bp TACATTATGGTCATTACCAGAGAAATAGCCAGTTGCATTGGCCCGTaGGCGTGGAGGCAAACCAGCATAGTTGTACACGTTCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: YIMVITREIASCIGP*AWRQTSIVVHVLSL
Trigger: CAAGGAAAGAACGTGTACAACTATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGTAATGACCATAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGAAGGCATGGGAGATTaGTCTGTAAGTTCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSREGMGD*SVSSEE
Trigger: TTCCTCAGAACTTACAGACAAATCTCCCATGCCTTC...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp TACTTTCTTGCACTCTCTGCTCAGGTGACACTTTGCCATCATACTGAATGGGTGTATACTTGGTGCTTCTaGTACCTGCCCCACAACTGG +
Preference number: 5 (lower is better)
Translates to: YFLALSAQVTLCHHTEWVYTWCF*YLPHNW
Trigger: CCAGTTGTGGGGCAGGTACAAGAAGCACCAAGTATA...CACCCATTCAGTATGATGGCAAAGTGTCACCTGAGCAGAGAGTGCAAGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGCCGTTCCCTGGACCTaGTGGGAATTATTTAATCCT +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPAVPWT*WELFNP
Trigger: AGGATTAAATAATTCCCACAAGGTCCAGGGAACGGC...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCAAAGGAGTGGTAATTaGAACTGCTGGTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPQRSGN*NCWWHL
Trigger: CAGATGCCACCAGCAGTTCAAATTACCACTCCTTTG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATCAGGACTGACAGCCTaGGCTGGGTGCCGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELESGLTA*AGCRPS
Trigger: AGAGGGACGGCACCCAGCCAAGGCTGTCAGTCCTGA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGAAGAAAGTAATGAGCTaGCCGTGCTTTTTAGACACT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGKKVMS*PCFLDT
Trigger: AGTGTCTAAAAAGCACGGCAAGCTCATTACTTTCTT...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS TCA 90 bp GGTTTGGTGCCCACACAATGGCAAGGTTTTTCGCATGCATATTTGTaGTGGAGCAATAGTCTGCTAGAAGAGACAGGTGTCTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: GLVPTQWQGFSHAYL*WSNSLLEETGVSSG
Trigger: TCCTGATGAGACACCTGTCTCTTCTAGCAGACTATTGCTCCATCACAAATATGCATGCGAAAAACCTTGCCATTGTGTGGGCACCAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 90 bp CCGCCCAATCTTCGGAGAGAAAGCATAAACAACCTTTTCTGTAAATaGAGATGGCTTAGAAGACTTGTCGTCAGTGGGGCTCAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: PPNLRRESINNLFCK*RWLRRLVVSGAQVQ
Trigger: CTGGACTTGAGCCCCACTGACGACAAGTCTTCTAAGCCATCTTCATTTACAGAAAAGGTTGTTTATGCTTTCTCTCCGAAGATTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 90 bp TGGAGTCATATTGAAATGCAAACAGTTTTCTGGACCAAAGGGCTCTaGGGTGACATCAGGCCTAGCAAAGGAGGAATAGGCTATCTTCTG +
Preference number: 5 (lower is better)
Translates to: WSHIEMQTVFWTKGL*GDIRPSKGGIGYLL
Trigger: CAGAAGATAGCCTATTCCTCCTTTGCTAGGCCTGATGTCACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGGGCACAGAATGGATGTCTaGAACATAAGGTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLPGHRMDV*NIRFFC
Trigger: ACAAAAGAACCTTATGTTCAAGACATCCATTCTGTG...CCCCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAGAGACCAGCAGGGACTaGGGCCTTGACAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: FQISALDFIVTLWSIWEIETSRD*GLDREA
Trigger: AGCTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCTC...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGACTCTGACTCAGCTTTaGGAGGACTACATTGAAATG +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRTLTQL*EDYIEM
Trigger: CATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGT...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGCTCCCCAGAGTCAGTaGTGTTGGACTGGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEAPQSQ*CWTGWD
Trigger: GTCCCACCCAGTCCAACACAACTGACTCTGGGGAGC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACAAAGGAGTGGTAATTaGAACTGCTGGTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLQRSGN*NCWWHL
Trigger: CAGATGCCACCAGCAGTTCAAATTACCACTCCTTTG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTACTGGTAGACTGGTCTaGGGCAGTAGGCTGGTTCAT +
Preference number: 5 (lower is better)
Translates to: LSFLKENTVDDSVLALKCTGRLV*GSRLVH
Trigger: ATGAACCAGCCTACTGCCCAAGACCAGTCTACCAGT...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCCCACAGTTGATCTTGTaGCCAGCGATAGTTGAAAGG +
Preference number: 5 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCPQLIL*PAIVER
Trigger: CCTTTCAACTATCGCTGGCAACAAGATCAACTGTGG...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS TCA 90 bp TCTCTTTCTTCCACACTTTTGTCCCAAGATGTAGGTGATGCATTCTaGGCTACAGTATTGGAGACCGTACCGATGACTTCTGATACCCGA +
Preference number: 5 (lower is better)
Translates to: SLSSTLLSQDVGDAF*ATVLETVPMTSDTR
Trigger: TCGGGTATCAGAAGTCATCGGTACGGTCTCCAATACTGTAGCTCAGAATGCATCACCTACATCTTGGGACAAAAGTGTGGAAGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTTTGATCTCAGCAGGTTaGGTGCCCACACAATGGCAA +
Preference number: 5 (lower is better)
Translates to: LSFLKENTVDDSVLALKCLISAG*VPTQWQ
Trigger: TTGCCATTGTGTGGGCACCAAACCTGCTGAGATCAA...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGAGACCAGCAGGGACTaGGGCCTTGACAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEETSRD*GLDREA
Trigger: AGCTTCTCTGTCAAGGCCCAAGTCCCTGCTGGTCTC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTAGATGGCTTAGAAGACTaGTCGTCAGTGGGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLDGLED*SSVGLK
Trigger: CTTGAGCCCCACTGACGACAAGTCTTCTAAGCCATC...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGGTCTTTCCTTGTAGCCTaGGATTGTAGAAAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: KIEQSTVQQRLLQLYCSRSFLVA*DCRKQS
Trigger: ACTTTGCTTTCTACAATCCAAGGCTACAAGGAAAGA...CCGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGATAATTGCCTATGGCTaGCTTCCTGATGCGCCCTGT +
Preference number: 5 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLIIAYG*LPDAPC
Trigger: ACAGGGCGCATCAGGAAGCAAGCCATAGGCAATTAT...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TGCCATAAACCTAATCTTTCACAAATTCACAGCAGTCACAGCAGCAGGACTTTATTGATCTCAGCAGGTTaGGTGCCCACACAATGGCAA +
Preference number: 5 (lower is better)
Translates to: CHKPNLSQIHSSHSSRTLLISAG*VPTQWQ
Trigger: TTGCCATTGTGTGGGCACCAAACCTGCTGAGATCAA...TAAAGTCCTGCTGCTGTGACTGCTGTGAATTTGTGAAAGATTAGGTTTATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTGAGGACTTCCCCAAATaGAAAAAGGAACGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCEDFPK*KKERQL
Trigger: CAGCTGGCGTTCCTTTTTCAATTTGGGGAAGTCCTC...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp ACTGGTGAGCCTATGAGCAATGGATCCAAAAATGGAGTACAACCACACAGATGCACTCTGACTCAGCTTTaGGAGGACTACATTGAAATG +
Preference number: 5 (lower is better)
Translates to: TGEPMSNGSKNGVQPHRCTLTQL*EDYIEM
Trigger: CATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGT...GCATCTGTGTGGTTGTACTCCATTTTTGGATCCATTGCTCATAGGCTCACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp CTGTCCTTTCTTAAGGAGAACACTGTGGATGATTCTGTACTGGCACTAAAGTGTCAAAGGAGTGGTAATTaGAACTGCTGGTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: LSFLKENTVDDSVLALKCQRSGN*NCWWHL
Trigger: CAGATGCCACCAGCAGTTCAAATTACCACTCCTTTG...ACACTTTAGTGCCAGTACAGAATCATCCACAGTGTTCTCCTTAAGAAAGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAACTGGTAGACTGGTCTaGGGCAGTAGGCTGGTTCAT +
Preference number: 5 (lower is better)
Translates to: FQISALDFIVTLWSIWEITGRLV*GSRLVH
Trigger: ATGAACCAGCCTACTGCCCAAGACCAGTCTACCAGT...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGGGTCTGTCCAGATCTTaGGGAAGCCTCACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FRILDSFVERDNESRKEWGLSRS*GSLTSL
Trigger: CAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACC...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AAAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCCCGCACAGAATGGATGTCTaGAACATAAGGTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: KNRTVHCPAEAASTLLLPHRMDV*NIRFFC
Trigger: ACAAAAGAACCTTATGTTCAAGACATCCATTCTGTG...CGGGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp TTTAGAATACTAGACTCCTTTGTGGAGAGGGATAATGAAAGCAGAAAAGAGTGGACCGTTCTTCATCCGTaGCTGCTGAAACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: FRILDSFVERDNESRKEWTVLHP*LLKQHQ
Trigger: CTGATGCTGTTTCAGCAGCAACGGATGAAGAACGGT...CCACTCTTTTCTGCTTTCATTATCCCTCTCCACAAAGGAGTCTAGTATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS TCA 90 bp ATTTATGACATCTCTTTCTTCCACACTTTTGTCCCAAGATGTAGGTaGTGCATTCTGAGCTACAGTATTGGAGACCGTACCGATGACTTC +
Preference number: 5 (lower is better)
Translates to: IYDISFFHTFVPRCR*CILSYSIGDRTDDF
Trigger: GAAGTCATCGGTACGGTCTCCAATACTGTAGCTCAGAATGCATCACCTACATCTTGGGACAAAAGTGTGGAAGAAAGAGATGTCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS-3UTR CAA 90 bp ATCAAAATTGGCCTGGACCTTGTAGCACTTCTCTTCAGGCAAGGCCTGAAGTTACACAGAATGGATGTCTaGAACATAAGGTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: IKIGLDLVALLFRQGLKLHRMDV*NIRFFC
Trigger: ACAAAAGAACCTTATGTTCAAGACATCCATTCTGTG...TAACTTCAGGCCTTGCCTGAAGAGAAGTGCTACAAGGTCCAGGCCAATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGAGGACTTCCCCAAATaGAAAAAGGAACGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEEDFPK*KKERQL
Trigger: CAGCTGGCGTTCCTTTTTCAATTTGGGGAAGTCCTC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAATATACTTGGTGCTTCTaGTACCTGCCCCACAACTGG +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEYTWCF*YLPHNW
Trigger: CCAGTTGTGGGGCAGGTACAAGAAGCACCAAGTATA...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTCCAGATATCTGCTTTGGACTTCATTGTTACTCTCTGGTCAATCTGGGAAATAAGTTATGGTAGTTGCTaGGCTCAGAAGTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: FQISALDFIVTLWSIWEISYGSC*AQKCLA
Trigger: TGCCAGACACTTCTGAGCCAAGCAACTACCATAACT...TATTTCCCAGATTGACCAGAGAGTAACAATGAAGTCCAAAGCAGATATCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp GTTAGAAAGAACTATTCTGAAATGCTGGTGTCGGTGACAAATGCAGCAAGCCTGCATGTGCTTAATACTTaGGGAGGCATGTCAATAACA +
Preference number: 5 (lower is better)
Translates to: VRKNYSEMLVSVTNAASLHVLNT*GGMSIT
Trigger: TGTTATTGACATGCCTCCCAAAGTATTAAGCACATG...CAGGCTTGCTGCATTTGTCACCGACACCAGCATTTCAGAATAGTTCTTTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGCCGTTCCCTGGACCTaGTGGGAATTATTTAATCCT +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEAVPWT*WELFNP
Trigger: AGGATTAAATAATTCCCACAAGGTCCAGGGAACGGC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp AATAGGGCTGGAACAGAGAAATGGACTTTACAGGAACCTTCTCTGAATTCACTGTCTTTCCTTGTAGCCTaGGATTGTAGAAAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: NRAGTEKWTLQEPSLNSLSFLVA*DCRKQS
Trigger: ACTTTGCTTTCTACAATCCAAGGCTACAAGGAAAGA...CAGTGAATTCAGAGAAGGTTCCTGTAAAGTCCATTTCTCTGTTCCAGCCCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp TTTCAAAACAAAGTCCTGGGCATTCACATGTTTAACACGTCTAGAGAGTTAGAAGAAGGCATGGGAGATTaGTCTGTAAGTTCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: FQNKVLGIHMFNTSRELEEGMGD*SVSSEE
Trigger: TTCCTCAGAACTTACAGACAAATCTCCCATGCCTTC...TTCTAACTCTCTAGACGTGTTAAACATGTGAATGCCCAGGACTTTGTTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS-3UTR CAA 90 bp GACCATAACGCTCCATGCCAACACTTGAAAATAACATTCAGTTCCTGTGTTTGTTCTTTCCTTGTAGCCTaGGATTGTAGAAAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: DHNAPCQHLKITFSSCVCSFLVA*DCRKQS
Trigger: ACTTTGCTTTCTACAATCCAAGGCTACAAGGAAAGA...ACAAACACAGGAACTGAATGTTATTTTCAAGTGTTGGCATGGAGCGTTATGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
CDS CCA 72 bp GATGGGTGCGGGGTCACCCATGGCCCGAGACTCAGGTaGCCTCTCGGGAGCTGGAGCCGTTCCCTGGACCTT +
Preference number: 6 (lower is better)
Translates to: DGCGVTHGPRLR*PLGSWSRSLDL
Trigger: AAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCACCTGAGTCTCGGGCCATGGGTGACCCCGCACCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp CTGGGCAGCAGCAGTGCCATCACTGAGGAAGATGGGTaGGGGGTCACCCATGGCCCGAGACTCAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LGSSSAITEEDG*GVTHGPRLRWP
Trigger: AGGCCACCTGAGTCTCGGGCCATGGGTGACCCCGCACCCATCTTCCTCAGTGATGGCACTGCTGCTGCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp AATCAGCAGCCGAGGGCTGCTCAGCCAGGACCCTGCTaGCCTCGCTGTTGCTCGGTTCCGCTCTTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: NQQPRAAQPGPC*PRCCSVPLLLE
Trigger: CTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTGATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GGTGGAGGGAGGGGCCGATTAGTTCTGTGCGTGCGCTaGAGGGTGGCAGCCACAAAATCAGCAGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: GGGRGRLVLCVR*RVAATKSAAEG
Trigger: GCCCTCGGCTGCTGATTTTGTGGCTGCCACCCTTCAGCGCACGCACAGAACTAATCGGCCCCTCCCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp CAAAATCAGCAGCCGAGGGCTGCTCAGCCAGGACCCTaGTGGCCTCGCTGTTGCTCGGTTCCGCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: QNQQPRAAQPGP*WPRCCSVPLLL
Trigger: CAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGCAGCCCTCGGCTGCTGATTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GGTGCTTCCTGTAGAAACGCTCGTCCCCCTCAGGACTaGCAGCCTTGGCTGGGTGCCGTCCCTCTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: GASCRNARPPQD*QPWLGAVPLSP
Trigger: AGGGGAAAGAGGGACGGCACCCAGCCAAGGCTGTCAGTCCTGAGGGGGACGAGCGTTTCTACAGGAAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp AGGGCTGCTCAGCCAGGACCCTGCTGGCCTCGCTGTTaGTCGGTTCCGCTCTTGCTGGAGTTGCCATCATGT +
Preference number: 6 (lower is better)
Translates to: RAAQPGPCWPRC*SVPLLLELPSC
Trigger: ACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp CTGCTCCTGTCTGACTCTGTCCAGACGGTACAGCCTTaGTCTGACTGCTCAGGACAGGCCGCTCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LLLSDSVQTVQP*SDCSGQAAPLS
Trigger: GGACAGAGGAGCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTGGACAGAGTCAGACAGGAGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp CATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCATCTTaGTCTCCATTGTCCGTGTTGGGGGAACTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: HLQRWSARQQPS*SPLSVLGELGQ
Trigger: CTGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp GGACCCTGCTGGCCTCGCTGTTGCTCGGTTCCGCTCTaGCTGGAGTTGCCATCATGTAAGCCATGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GPCWPRCCSVPL*LELPSCKPWWL
Trigger: CAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp CGCTGGAGTGCAAGGCAGCAGCCATCTTGCTCTCCATaGTCCGTGTTGGGGGAACTGGGGCAGCAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: RWSARQQPSCSP*SVLGELGQQSH
Trigger: GTGGCTTTGCTGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCTGCTGCCTTGCACTCCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp GCATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCATCTaGCTCTCCATTGTCCGTGTTGGGGGAACTGGGGCA +
Preference number: 6 (lower is better)
Translates to: ASAALECKAAAI*LSIVRVGGTGA
Trigger: TGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp GCTCAGCCAGGACCCTGCTGGCCTCGCTGTTGCTCGGTTCCGCTCTaGCTGGAGTTGCCATCATGTAAGCCATGGTGGCTGTGCTGGAAT +
Preference number: 6 (lower is better)
Translates to: AQPGPCWPRCCSVPL*LELPSCKPWWLCWN
Trigger: ATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTCCTGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp CATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCATCTTGCTCTCCATaGTCCGTGTTGGGGGAACTGGGGCAGCAAAGCCACAGGAATGGC +
Preference number: 6 (lower is better)
Translates to: HLQRWSARQQPSCSP*SVLGELGQQSHRNG
Trigger: GCCATTCCTGTGGCTTTGCTGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCTGCTGCCTTGCACTCCAGCGCTGCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp TGTGGCAAGGACAACTCTGTGGGCAGGAAGGCCCCCTaGCCCAATGCTGTGGCGTATGTCCTGCTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: CGKDNSVGRKAP*PNAVAYVLLCG
Trigger: TCCACAGAGCAGGACATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCCCACAGAGTTGTCCTTGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GGATCTCAGGGACATCTGCTCCTCTTGCCATTGCGCTaGGTGTTTCCTCCCAATCAGGCCGCTCTCGGGGGT +
Preference number: 6 (lower is better)
Translates to: GSQGHLLLLPLR*VFPPNQAALGG
Trigger: ACCCCCGAGAGCGGCCTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS GCA 72 bp TCTGACTCTGTCCAGACGGTACAGCCTTGCTCTGACTaGTCAGGACAGGCCGCTCCTCTGTCCCTGGCAACT +
Preference number: 6 (lower is better)
Translates to: SDSVQTVQPCSD*SGQAAPLSLAT
Trigger: AGTTGCCAGGGACAGAGGAGCGGCCTGTCCTGAGCAGTCAGAGCAAGGCTGTACCGTCTGGACAGAGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp GGGAGAGGCTGGTTACAGTTTCCGAGTCCATTGATCTaGGGGTGGAACTGCTCTGCTGGCCGGTCCGTTTGG +
Preference number: 6 (lower is better)
Translates to: GRGWLQFPSPLI*GWNCSAGRSVW
Trigger: CCAAACGGACCGGCCAGCAGAGCAGTTCCACCCGCAGATCAATGGACTCGGAAACTGTAACCAGCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp GACCCTGCTGGCCTCGCTGTTGCTCGGTTCCGCTCTTaGTGGAGTTGCCATCATGTAAGCCATGGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: DPAGLAVARFRS*WSCHHVSHGGC
Trigger: ACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CCTGCTGGCCTCGCTGTTGCTCGGTTCCGCTCTTGCTaGAGTTGCCATCATGTAAGCCATGGTGGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: PAGLAVARFRSC*SCHHVSHGGCA
Trigger: AGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGGAACCGAGCAACAGCGAGGCCAGCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CTTGTAGCCTTGGATTGTAGAAAGCAAAGTCCCGACTaGACAGGCGGTGGAGGGGCCGCAGCTGGACTGTGC +
Preference number: 6 (lower is better)
Translates to: LVALDCRKQSPD*TGGGGAAAGLC
Trigger: GCACAGTCCAGCTGCGGCCCCTCCACCGCCTGTCCAGTCGGGACTTTGCTTTCTACAATCCAAGGCTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp ACTCTGTGGGCAGGAAGGCCCCCTGACCCAATGCTGTaGCGTATGTCCTGCTCTGTGGATGGACAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: TLWAGRPPDPML*RMSCSVDGQSQ
Trigger: CTGGCTTTGTCCATCCACAGAGCAGGACATACGCCACAGCATTGGGTCAGGGGGCCTTCCTGCCCACAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp TTCTCAGGGCCAGGTGGCTGCCTGGCTCGAGGTCTGTCCAGATCTTaGGGAAGCCTCACTTCCTTGTGGTTCAGGGTTAGAGACCCCTGC +
Preference number: 6 (lower is better)
Translates to: FSGPGGCLARGLSRS*GSLTSLWFRVRDPC
Trigger: GCAGGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CATAGGAATTGCACCGGTTCCCCAGCACGTCGCCATTaGAAGAGGCAGAGAGCGCATCGCTGCTGGATCTGG +
Preference number: 6 (lower is better)
Translates to: HRNCTGSPARRH*KRQRAHRCWIW
Trigger: CCAGATCCAGCAGCGATGCGCTCTCTGCCTCTTTCAATGGCGACGTGCTGGGGAACCGGTGCAATTCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CACCCAGCCTGGGAAGCCCCTGGTCTCTTCAGTGTCTaGCTTGAGGCTTGCTGTGCAGACTCAGCTAACGCT +
Preference number: 6 (lower is better)
Translates to: HPAWEAPGLFSV*LEACCADSANA
Trigger: AGCGTTAGCTGAGTCTGCACAGCAAGCCTCAAGTCAGACACTGAAGAGACCAGGGGCTTCCCAGGCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp AAGACTCAGCACGTAAGTGGAGTGGTGGAGCCCTGCTaGTTTCCCGAACCTTCTCAGGCAGTCCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: KTQHVSGVVEPC*FPEPSQAVQAE
Trigger: CTCAGCCTGGACTGCCTGAGAAGGTTCGGGAAAGCAGCAGGGCTCCACCACTCCACTTACGTGCTGAGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp TCCAGGGATCTCAGGGACATCTGCTCCTCTTGCCATTaGGCTGAGTGTTTCCTCCCAATCAGGCCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SRDLRDICSSCH*AECFLPIRPLS
Trigger: CGAGAGCGGCCTGATTGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS CCA 72 bp TTCCCGGCGCCACATAGGTGTTATAACGAGGACCCATaGAGGCTGGTGGCTCTGACCGGGCACCATATACCT +
Preference number: 6 (lower is better)
Translates to: FPAPHRCYNEDP*RLVALTGHHIP
Trigger: AGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATAACACCTATGTGGCGCCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp AGTCTCTGGAGTGTTTCTCAGGGCCAGGTGGCTGCCTaGCTCGAGGTCTGTCCAGATCTTTGGGAAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SLWSVSQGQVAA*LEVCPDLWEAS
Trigger: TGAGGCTTCCCAAAGATCTGGACAGACCTCGAGCCAGGCAGCCACCTGGCCCTGAGAAACACTCCAGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp CCTATTAAGTCTACTTGGTGGAGTTGCTCCCCAGAGTCAGTTGTGTaGGACTGGGTGGGACCTCCCATAGCTGCTGCCTCAGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PIKSTWWSCSPESVV*DWVGPPIAAASGRG
Trigger: GCCTCTCCCTGAGGCAGCAGCTATGGGAGGTCCCACCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp AGCGGGCCTGGGAGGACTGGTATGGCTTATACTGGTAGACTGGTCTaGGGCAGTAGGCTGGTTCATCATCTGGGGGAACTTCTGTCCGTG +
Preference number: 6 (lower is better)
Translates to: SGPGRTGMAYTGRLV*GSRLVHHLGELLSV
Trigger: CACGGACAGAAGTTCCCCCAGATGATGAACCAGCCTACTGCCCAAGACCAGTCTACCAGTATAAGCCATACCAGTCCTCCCAGGCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp GAAAAGACTCAGCACGTAAGTGGAGTGGTGGAGCCCTaGTGCTTTCCCGAACCTTCTCAGGCAGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: EKTQHVSGVVEP*CFPEPSQAVQA
Trigger: AGCCTGGACTGCCTGAGAAGGTTCGGGAAAGCAGCAGGGCTCCACCACTCCACTTACGTGCTGAGTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GGCTGGTTACAGTTTCCGAGTCCATTGATCTGCGGGTaGAACTGCTCTGCTGGCCGGTCCGTTTGGAAACAG +
Preference number: 6 (lower is better)
Translates to: GWLQFPSPLICG*NCSAGRSVWKQ
Trigger: CTGTTTCCAAACGGACCGGCCAGCAGAGCAGTTCCACCCGCAGATCAATGGACTCGGAAACTGTAACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CCACAGGAATGGCCAGGAAAAGACTCAGCACGTAAGTaGAGTGGTGGAGCCCTGCTGCTTTCCCGAACCTTC +
Preference number: 6 (lower is better)
Translates to: PQEWPGKDSARK*SGGALLLSRTF
Trigger: GAAGGTTCGGGAAAGCAGCAGGGCTCCACCACTCCACTTACGTGCTGAGTCTTTTCCTGGCCATTCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GAACTTCTGTCCGTGAAATGGGAACAGAGCGGATCATaGAAGGTGGGGGTGCATGGAGGGACTGTACCCTCC +
Preference number: 6 (lower is better)
Translates to: ELLSVKWEQSGS*KVGVHGGTVPS
Trigger: GGAGGGTACAGTCCCTCCATGCACCCCCACCTTCCATGATCCGCTCTGTTCCCATTTCACGGACAGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GGCCTGGGAGGACTGGTATGGCTTATACTGGTAGACTaGTCTTGGGCAGTAGGCTGGTTCATCATCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GLGGLVWLILVD*SWAVGWFIIWG
Trigger: CCCCCAGATGATGAACCAGCCTACTGCCCAAGACCAGTCTACCAGTATAAGCCATACCAGTCCTCCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp CAGCCTGGGAAGCCCCTGGTCTCTTCAGTGTCTGACTaGAGGCTTGCTGTGCAGACTCAGCTAACGCTAGTG +
Preference number: 6 (lower is better)
Translates to: QPGKPLVSSVSD*RLAVQTQLTLV
Trigger: CACTAGCGTTAGCTGAGTCTGCACAGCAAGCCTCAAGTCAGACACTGAAGAGACCAGGGGCTTCCCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp CCCAGAGAAGAGACATACTCAACCCGACTACACGGCTaGGAGTGGTGTCCAGACATGTTTCTTCCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: PREETYSTRLHG*EWCPDMFLPGA
Trigger: GGCGCCGGGAAGAAACATGTCTGGACACCACTCCAAGCCGTGTAGTCGGGTTGAGTATGTCTCTTCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp CCAGGTGGCTGCCTGGCTCGAGGTCTGTCCAGATCTTaGGGAAGCCTCACTTCCTTGTGGTTCAGGGTTAGA +
Preference number: 6 (lower is better)
Translates to: PGGCLARGLSRS*GSLTSLWFRVR
Trigger: TCTAACCCTGAACCACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACCTCGAGCCAGGCAGCCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GGCCTCTTTCTTTCAAGTGGGAACTCAATGACGGTGTaGAACTTCCCTTGCAGCGCAGCAGGCCCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: GLFLSSGNSMTV*NFPCSAAGPSP
Trigger: CGGAGAAGGGCCTGCTGCGCTGCAAGGGAAGTTTCACACCGTCATTGAGTTCCCACTTGAAAGAAAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GGTGTTATAACGAGGACCCATGGAGGCTGGTGGCTCTaGCCGGGCACCATATACCTGATGTGGCTCCAACTT +
Preference number: 6 (lower is better)
Translates to: GVITRTHGGWWL*PGTIYLMWLQL
Trigger: AAGTTGGAGCCACATCAGGTATATGGTGCCCGGTCAGAGCCACCAGCCTCCATGGGTCCTCGTTATAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GTAGGCTGGTTCATCATCTGGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGGATCATGGAAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: VGWFIIWGNFCP*NGNRADHGRWG
Trigger: CCCCCACCTTCCATGATCCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAACCAGCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GATGGCTTTTCTGCCTGTGTGCTGCCATACCCTCCATaGTGGTGGGCTCTGTCAAATTCGGACTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: DGFSACVLPYPP*WWALSNSDSGC
Trigger: GCACCCAGAGTCCGAATTTGACAGAGCCCACCATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp TCTCCTGGACTGGAGATACAGGTTCGGAACTTGCGGTaGTTCCTGGAGTCTGTGACTGGCTACCACCTGCTT +
Preference number: 6 (lower is better)
Translates to: SPGLEIQVRNLR*FLESVTGYHLL
Trigger: AAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTATCTCCAGTCCAGGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp AGGCTGACGAAGGGACAAAGGAGTGGTAATTTGAACTaGTGGTGGCATCTGCAGCGCTGGAGTGCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: RLTKGQRSGNLN*WWHLQRWSARQ
Trigger: CTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp GCTTCTGCGGGAGGGATGGCTTTTCTGCCTGTGTGCTaGCATACCCTCCATGATGGTGGGCTCTGTCAAATT +
Preference number: 6 (lower is better)
Translates to: ASAGGMAFLPVC*HTLHDGGLCQI
Trigger: AATTTGACAGAGCCCACCATCATGGAGGGTATGGCAGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CCGCTCTTGCTGGAGTTGCCATCATGTAAGCCATGGTaGCTGTGCTGGAATTCTCTTCAGGGGACCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PLLLELPSCKPW*LCWNSLQGTQR
Trigger: TCTCTGGGTCCCCTGAAGAGAATTCCAGCACAGCCACCATGGCTTACATGATGGCAACTCCAGCAAGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp AGCCATCTTGCTCTCCATTGTCCGTGTTGGGGGAACTaGGGCAGCAAAGCCACAGGAATGGCCAGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: SHLALHCPCWGN*GSKATGMARKR
Trigger: TCTTTTCCTGGCCATTCCTGTGGCTTTGCTGCCCCAGTTCCCCCAACACGGACAATGGAGAGCAAGATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp ACGAAGGGACAAAGGAGTGGTAATTTGAACTGCTGGTaGCATCTGCAGCGCTGGAGTGCAAGGCAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: TKGQRSGNLNCW*HLQRWSARQQP
Trigger: TGGCTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CTGACGAAGGGACAAAGGAGTGGTAATTTGAACTGCTaGTGGCATCTGCAGCGCTGGAGTGCAAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LTKGQRSGNLNC*WHLQRWSARQQ
Trigger: CTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CCAGAGAAGAGACATACTCAACCCGACTACACGGCTTaGAGTGGTGTCCAGACATGTTTCTTCCCGGCGCCA +
Preference number: 6 (lower is better)
Translates to: PEKRHTQPDYTA*SGVQTCFFPAP
Trigger: TGGCGCCGGGAAGAAACATGTCTGGACACCACTCCAAGCCGTGTAGTCGGGTTGAGTATGTCTCTTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp AGGCCCCCTCAGGACTGTAATAGGAGCTGGAGGAGCTaGAGTACGGACTATAGCGATAATGGACCCGTCCAT +
Preference number: 6 (lower is better)
Translates to: RPPQDCNRSWRS*STDYSDNGPVH
Trigger: ATGGACGGGTCCATTATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTCCTGAGGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GGCGCTTGCTGTGTGTCTGATACTGGTATAGCACGCTaGGGTCCCTCTCCAGGTTCTGGGTATGGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: GACCVSDTGIAR*GPSPGSGYGEV
Trigger: AACTTCACCATACCCAGAACCTGGAGAGGGACCCCAGCGTGCTATACCAGTATCAGACACACAGCAAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp CCACTGAGGCTGACGAAGGGACAAAGGAGTGGTAATTaGAACTGCTGGTGGCATCTGCAGCGCTGGAGTGCA +
Preference number: 6 (lower is better)
Translates to: PLRLTKGQRSGN*NCWWHLQRWSA
Trigger: TGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp TCACATCATCCACTGAGGCTGACGAAGGGACAAAGGAGTGGTAATTaGAACTGCTGGTGGCATCTGCAGCGCTGGAGTGCAAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SHHPLRLTKGQRSGN*NCWWHLQRWSARQQ
Trigger: CTGCTGCCTTGCACTCCAGCGCTGCAGATGCCACCAGCAGTTCAAATTACCACTCCTTTGTCCCTTCGTCAGCCTCAGTGGATGATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp ATGTCTGGTGGACTCAAGTCAACATCCTCAGCCGAATaGGGAGACACAAGAGCTGGAATGTGGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: MSGGLKSTSSAE*GDTRAGMWSSP
Trigger: GGGGCTGCTCCACATTCCAGCTCTTGTGTCTCCTCATTCGGCTGAGGATGTTGACTTGAGTCCACCAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GGAATAGGCTATCTTCTGAGAAGCATGCTTAGGCTGTaGGACGGGGAGTGGCACGGGCATCACATCATCCAC +
Preference number: 6 (lower is better)
Translates to: GIGYLLRSMLRL*DGEWHGHHIIH
Trigger: GTGGATGATGTGATGCCCGTGCCACTCCCCGTCTCACAGCCTAAGCATGCTTCTCAGAAGATAGCCTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp TGCGCCCTGTGCTCTGGGAGGCTACAACCCATATCGTaGAGCTTTCTGTTCCTAAGGCTGCTTTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CALCSGRLQPIS*SFLFLRLLCFC
Trigger: GCAGAAGCAAAGCAGCCTTAGGAACAGAAAGCTTCACGATATGGGTTGTAGCCTCCCAGAGCACAGGGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp AGGGACTTGGGCCTTGACAGAGAAGCTGCTCCTTCCTaGATGACAGCGCTGATTTTGCCACTGAAGAGCACA +
Preference number: 6 (lower is better)
Translates to: RDLGLDREAAPS*MTALILPLKST
Trigger: TGTGCTCTTCAGTGGCAAAATCAGCGCTGTCATGCAGGAAGGAGCAGCTTCTCTGTCAAGGCCCAAGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp ACTGGTCCTGCTCCAAAAAGGAGACAGTGGACACGCTaGTCTTCCCAGCGTGGTCTTCAGGGAAACTTCCAT +
Preference number: 6 (lower is better)
Translates to: TGPAPKRRQWTR*SSQRGLQGNFH
Trigger: ATGGAAGTTTCCCTGAAGACCACGCTGGGAAGAGCAGCGTGTCCACTGTCTCCTTTTTGGAGCAGGACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp CTTAAGAGTCAGGTCTCCAGGGATCTCAGGGACATCTaGTCCTCTTGCCATTGCGCTGAGTGTTTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: LKSQVSRDLRDI*SSCHCAECFLP
Trigger: TGGGAGGAAACACTCAGCGCAATGGCAAGAGGAGCAGATGTCCCTGAGATCCCTGGAGACCTGACTCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS CCA 72 bp GGGATCAAAGTCCAGACTGGCCACTCCGATGTCTGGTaGACTCAAGTCAACATCCTCAGCCGAATGAGGAGA +
Preference number: 6 (lower is better)
Translates to: GIKVQTGHSDVW*TQVNILSRMRR
Trigger: TCTCCTCATTCGGCTGAGGATGTTGACTTGAGTCCACCAGACATCGGAGTGGCCAGTCTGGACTTTGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CATGGGATCAAAGTCCAGACTGGCCACTCCGATGTCTaGTGGACTCAAGTCAACATCCTCAGCCGAATGAGG +
Preference number: 6 (lower is better)
Translates to: HGIKVQTGHSDV*WTQVNILSRMR
Trigger: CCTCATTCGGCTGAGGATGTTGACTTGAGTCCACCAGACATCGGAGTGGCCAGTCTGGACTTTGATCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CTGGTTCATCATCTGGGGGAACTTCTGTCCGTGAAATaGGAACAGAGCGGATCATGGAAGGTGGGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: LVHHLGELLSVK*EQSGSWKVGVH
Trigger: ATGCACCCCCACCTTCCATGATCCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CTTTTACCTTCTGCCGTGCTCGGCTCTCTCGGCGGATaGACTGCATGCGGTATTTTTCCATGTCCTCAAGGT +
Preference number: 6 (lower is better)
Translates to: LLPSAVLGSLGG*TACGIFPCPQG
Trigger: ACCTTGAGGACATGGAAAAATACCGCATGCAGTCCATCCGCCGAGAGAGCCGAGCACGGCAGAAGGTAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GGTAGTTGCTTGGCTCAGAAGTGTCTGGCATCCCTTTaGACCCATAATCTAACTGGCCAGCTCCCTGGGGAT +
Preference number: 6 (lower is better)
Translates to: GSCLAQKCLASL*THNLTGQLPGD
Trigger: ATCCCCAGGGAGCTGGCCAGTTAGATTATGGGTCCAAAGGGATGCCAGACACTTCTGAGCCAAGCAACTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp TCAGTTTCTCCTGGACTGGAGATACAGGTTCGGAACTaGCGGTGCTTCCTGGAGTCTGTGACTGGCTACCAC +
Preference number: 6 (lower is better)
Translates to: SVSPGLEIQVRN*RCFLESVTGYH
Trigger: GTGGTAGCCAGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp TTCTCTTCAGGGGACCCAGAGAGAGGGTGGTGGGCTTaGTCCCTAGGCAAAGTAGAAGGCATGGGAGATTTG +
Preference number: 6 (lower is better)
Translates to: FSSGDPERGWWA*SLGKVEGMGDL
Trigger: CAAATCTCCCATGCCTTCTACTTTGCCTAGGGACAAAGCCCACCACCCTCTCTCTGGGTCCCCTGAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp AAAACGGACTCAGTTTCTCCTGGACTGGAGATACAGGTTCGGAACTaGCGGTGCTTCCTGGAGTCTGTGACTGGCTACCACCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: KTDSVSPGLEIQVRN*RCFLESVTGYHLLL
Trigger: CAGAAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTATCTCCAGTCCAGGAGAAACTGAGTCCGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp AGCTCTGAAGAACCTGGGGCACTTCAAACCCAGAATTaGGGAGGTGCTCCCCCAAGTCACAACCGAATACTC +
Preference number: 6 (lower is better)
Translates to: SSEEPGALQTQN*GGAPPSHNRIL
Trigger: GAGTATTCGGTTGTGACTTGGGGGAGCACCTCCTCAATTCTGGGTTTGAAGTGCCCCAGGTTCTTCAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
ENSMUST00000183121.2
CDS TCA 72 bp TACAGGTTCGGAACTTGCGGTGCTTCCTGGAGTCTGTaGCTGGCTACCACCTGCTTCTGCATCCTTCTTACT +
Preference number: 6 (lower is better)
Translates to: YRFGTCGASWSL*LATTCFCILLT
Trigger: AGTAAGAAGGATGCAGAAGCAGGTGGTAGCCAGTCACAGACTCCAGGAAGCACCGCAAGTTCCGAACCTGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GACTCAGGTGGCCTCTCGGGAGCTGGAGCCGTTCCCTaGACCTTGTGGGAATTATTTAATCCTATACTTGGT +
Preference number: 6 (lower is better)
Translates to: DSGGLSGAGAVP*TLWELFNPILG
Trigger: ACCAAGTATAGGATTAAATAATTCCCACAAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCACCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CATCACACAAGGCCCCCTCAGGACTGTAATAGGAGCTaGAGGAGCTGGAGTACGGACTATAGCGATAATGGA +
Preference number: 6 (lower is better)
Translates to: HHTRPPQDCNRS*RSWSTDYSDNG
Trigger: TCCATTATCGCTATAGTCCGTACTCCAGCTCCTCCAGCTCCTATTACAGTCCTGAGGGGGCCTTGTGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp ACCAGAGAAATAGCCAGTTGCATTGGCCCGTGGGCGTaGAGGCAAACCAGCATAGTTGTACACGTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: TREIASCIGPWA*RQTSIVVHVLS
Trigger: GGAAAGAACGTGTACAACTATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp TTGCCTATGGCTTGCTTCCTGATGCGCCCTGTGCTCTaGGAGGCTACAACCCATATCGTGAAGCTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: LPMACFLMRPVL*EATTHIVKLSV
Trigger: AACAGAAAGCTTCACGATATGGGTTGTAGCCTCCCAGAGCACAGGGCGCATCAGGAAGCAAGCCATAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GGTCTGTCCAGATCTTTGGGAAGCCTCACTTCCTTGTaGTTCAGGGTTAGAGACCCCTGCCCTGATGTCATA +
Preference number: 6 (lower is better)
Translates to: GLSRSLGSLTSL*FRVRDPCPDVI
Trigger: TATGACATCAGGGCAGGGGTCTCTAACCCTGAACCACAAGGAAGTGAGGCTTCCCAAAGATCTGGACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp GGTGGCCTCTCGGGAGCTGGAGCCGTTCCCTGGACCTaGTGGGAATTATTTAATCCTATACTTGGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GGLSGAGAVPWT*WELFNPILGAS
Trigger: AGAAGCACCAAGTATAGGATTAAATAATTCCCACAAGGTCCAGGGAACGGCTCCAGCTCCCGAGAGGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp TTGTCGATCTCCATCCAGGTAAGGGCAGGCCCACAGTaGATCTTGTTGCCAGCGATAGTTGAAAGGCGTGAC +
Preference number: 6 (lower is better)
Translates to: LSISIQVRAGPQ*ILLPAIVERRD
Trigger: GTCACGCCTTTCAACTATCGCTGGCAACAAGATCAACTGTGGGCCTGCCCTTACCTGGATGGAGATCGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS CAA 90 bp GTGCTGGAATTCTCTTCAGGGGACCCAGAGAGAGGGTGGTGGGCTTaGTCCCTAGGCAAAGTAGAAGGCATGGGAGATTTGTCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: VLEFSSGDPERGWWA*SLGKVEGMGDLSVS
Trigger: ACTTACAGACAAATCTCCCATGCCTTCTACTTTGCCTAGGGACAAAGCCCACCACCCTCTCTCTGGGTCCCCTGAAGAGAATTCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp GTGGAGGCAAACCAGCATAGTTGTACACGTTCTTTCCTTGTAGCCTaGGATTGTAGAAAGCAAAGTCCCGACTGGACAGGCGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: VEANQHSCTRSFLVA*DCRKQSPDWTGGGG
Trigger: CCCTCCACCGCCTGTCCAGTCGGGACTTTGCTTTCTACAATCCAAGGCTACAAGGAAAGAACGTGTACAACTATGCTGGTTTGCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp GAGGCTACAACCCATATCGTGAAGCTTTCTGTTCCTAAGGCTGCTTaGCTTCTGCGGGAGGGATGGCTTTTCTGCCTGTGTGCTGCCATA +
Preference number: 6 (lower is better)
Translates to: EATTHIVKLSVPKAA*LLREGWLFCLCAAI
Trigger: TATGGCAGCACACAGGCAGAAAAGCCATCCCTCCCGCAGAAGCAAAGCAGCCTTAGGAACAGAAAGCTTCACGATATGGGTTGTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp ACAATGCCATACCTCTCGATGAACGCTGTGCAGCTCTaGAGAACCTGGGGCACTTCAAACCCAGAATTGAGG +
Preference number: 6 (lower is better)
Translates to: TMPYLSMNAVQL*RTWGTSNPELR
Trigger: CCTCAATTCTGGGTTTGAAGTGCCCCAGGTTCTTCAGAGCTGCACAGCGTTCATCGAGAGGTATGGCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
ENSMUST00000183121.2
CDS TCA 72 bp TGCATGGAGAGAAGTAAGGGACTCTTCACTTTTAGCTaGGCGGAGGGTTCCTTCTGCCCTGCCACCTTTCAA +
Preference number: 6 (lower is better)
Translates to: CMERSKGLFTFS*AEGSFCPATFQ
Trigger: TTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGCTCAGCTAAAAGTGAAGAGTCCCTTACTTCTCTCCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CTCAAAGTAAGGCTGAAGCTGAGTTACGTGATAGTCTaGGCGGGCCTGGGAGGACTGGTATGGCTTATACTG +
Preference number: 6 (lower is better)
Translates to: LKVRLKLSYVIV*AGLGGLVWLIL
Trigger: CAGTATAAGCCATACCAGTCCTCCCAGGCCCGCTCAGACTATCACGTAACTCAGCTTCAGCCTTACTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp GCACCGACAGCAGGAGTGTTGATGGACGACTCCTCGTaGACTAGAAGATGGTTTCCCTTATTGTCGATCTCC +
Preference number: 6 (lower is better)
Translates to: APTAGVLMDDSS*TRRWFPLLSIS
Trigger: GGAGATCGACAATAAGGGAAACCATCTTCTAGTTCACGAGGAGTCGTCCATCAACACTCCTGCTGTCGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS GCA 72 bp CCCCCAAGTCACAACCGAATACTCTCTCTTTCAAGATaGCCCGCTGCTTTAGCTTCTGTTTTGTTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: PPSHNRILSLSR*PAALASVLLGE
Trigger: CTCGCCCAACAAAACAGAAGCTAAAGCAGCGGGGCATCTTGAAAGAGAGAGTATTCGGTTGTGACTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
ENSMUST00000183121.2
CDS CCA 72 bp ACCATATACCTGATGTGGCTCCAACTTATTGTGGTGTaGAGGAACACTCTGGGGGCGAAACTGGCAGTTTGG +
Preference number: 6 (lower is better)
Translates to: TIYLMWLQLIVV*RNTLGAKLAVW
Trigger: CCAAACTGCCAGTTTCGCCCCCAGAGTGTTCCTCCACACCACAATAAGTTGGAGCCACATCAGGTATATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GTCATTACCAGAGAAATAGCCAGTTGCATTGGCCCGTaGGCGTGGAGGCAAACCAGCATAGTTGTACACGTT +
Preference number: 6 (lower is better)
Translates to: VITREIASCIGP*AWRQTSIVVHV
Trigger: AACGTGTACAACTATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGTAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp TGTGGAGGAACACTCTGGGGGCGAAACTGGCAGTTTGGAGTCATATaGAAATGCAAACAGTTTTCTGGACCAAAGGGCTCTGCGGTGACA +
Preference number: 6 (lower is better)
Translates to: CGGTLWGRNWQFGVI*KCKQFSGPKGSAVT
Trigger: TGTCACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAGTGTTCCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp ATGTACTTATTTTCCGTCACAATAGGAGAACTGACCTaGGCCTGCGTCCTTGCCTGGGCTTCCTCCAATGTC +
Preference number: 6 (lower is better)
Translates to: MYLFSVTIGELT*ACVLAWASSNV
Trigger: GACATTGGAGGAAGCCCAGGCAAGGACGCAGGCTCAGGTCAGTTCTCCTATTGTGACGGAAAATAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CTGAGTGTTTCCTCCCAATCAGGCCGCTCTCGGGGGTaGACATTTCTATGTAGCTCTGGAACAAAATCATCC +
Preference number: 6 (lower is better)
Translates to: LSVSSQSGRSRG*TFLCSSGTKSS
Trigger: GGATGATTTTGTTCCAGAGCTACATAGAAATGTTCACCCCCGAGAGCGGCCTGATTGGGAGGAAACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000174641.8
ENSMUST00000182310.2
CDS GCA 72 bp AAAGCTGCTGTCCCACTGAAGCAAGCTGACTCTATCTaGTTTGATCTCAGCAGGTTTGGTGCCCACACAATG +
Preference number: 6 (lower is better)
Translates to: KAAVPLKQADSI*FDLSRFGAHTM
Trigger: CATTGTGTGGGCACCAAACCTGCTGAGATCAAAGCAGATAGAGTCAGCTTGCTTCAGTGGGACAGCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp TGTAGCGAATTCCCTATTAAGTCTACTTGGTGGAGTTaGTCCCCAGAGTCAGTTGTGTTGGACTGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: CSEFPIKSTWWS*SPESVVLDWVG
Trigger: TCCCACCCAGTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGGGAATTCGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp TGGGGGCGAAACTGGCAGTTTGGAGTCATATTGAAATaGAAACAGTTTTCTGGACCAAAGGGCTCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: WGRNWQFGVILK*KQFSGPKGSAV
Trigger: CACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTTTCGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp GACTACATTATGGTCATTACCAGAGAAATAGCCAGTTaGATTGGCCCGTGGGCGTGGAGGCAAACCAGCATA +
Preference number: 6 (lower is better)
Translates to: DYIMVITREIAS*IGPWAWRQTSI
Trigger: TATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGTAATGACCATAATGTAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp CCTCCAGGTTATCATACTGGGACACAACAGTCATGCTaGTCTGGCGCTTGCTGTGTGTCTGATACTGGTATA +
Preference number: 6 (lower is better)
Translates to: PPGYHTGTQQSC*SGACCVSDTGI
Trigger: TATACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCCAGTATGATAACCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp AATCCTCCAGGTTATCATACTGGGACACAACAGTCATaGTGCTCTGGCGCTTGCTGTGTGTCTGATACTGGT +
Preference number: 6 (lower is better)
Translates to: NPPGYHTGTQQS*CSGACCVSDTG
Trigger: ACCAGTATCAGACACACAGCAAGCGCCAGAGCAGCATGACTGTTGTGTCCCAGTATGATAACCTGGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp GGAAAGTGTCCCTTTGTGAAGGGTAACTTCTTCACATaGTTAACCTTCGTGCTCGCTGTACTGCCACAGGAC +
Preference number: 6 (lower is better)
Translates to: GKCPFVKGNFFT*LTFVLAVLPQD
Trigger: GTCCTGTGGCAGTACAGCGAGCACGAAGGTTAAGCATGTGAAGAAGTTACCCTTCACAAAGGGACACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS GCA 72 bp AATGACCAGGGAAGAGTCCCACCTGAAATCCATGCTTaGCTCTCCACCATGTGCTTAATACTTTGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: NDQGRVPPEIHA*LSTMCLILWEA
Trigger: TGCCTCCCAAAGTATTAAGCACATGGTGGAGAGGCAAGCATGGATTTCAGGTGGGACTCTTCCCTGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS CCA 72 bp CATTATGGTCATTACCAGAGAAATAGCCAGTTGCATTaGCCCGTGGGCGTGGAGGCAAACCAGCATAGTTGT +
Preference number: 6 (lower is better)
Translates to: HYGHYQRNSQLH*PVGVEANQHSC
Trigger: ACAACTATGCTGGTTTGCCTCCACGCCCACGGGCCAATGCAACTGGCTATTTCTCTGGTAATGACCATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GATGACATAGATCCCTCCCAAGTCTTCTTGCACAGCTaGTGTCATGTTGTCATACTGCGACATGATAGGCCC +
Preference number: 6 (lower is better)
Translates to: DDIDPSQVFLHS*CHVVILRHDRP
Trigger: GGGCCTATCATGTCGCAGTATGACAACATGACACCAGCTGTGCAAGAAGACTTGGGAGGGATCTATGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp GCGCAGATGGATGACATAGATCCCTCCCAAGTCTTCTaGCACAGCTGGTGTCATGTTGTCATACTGCGACAT +
Preference number: 6 (lower is better)
Translates to: AQMDDIDPSQVF*HSWCHVVILRH
Trigger: ATGTCGCAGTATGACAACATGACACCAGCTGTGCAAGAAGACTTGGGAGGGATCTATGTCATCCATCTGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp TGCCCTGCCACCTTTCAAAGCCATGGCTTTCATTTCTaGGGGCTCACTTTCATTACGCTGCAACTTGCGTTT +
Preference number: 6 (lower is better)
Translates to: CPATFQSHGFHF*GLTFITLQLAF
Trigger: AAACGCAAGTTGCAGCGTAATGAAAGTGAGCCCTCAGAAATGAAAGCCATGGCTTTGAAAGGTGGCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp ATGCATTCTGAGCTACAGTATTGGAGACCGTACCGATaGCTTCTGATACCCGAGGTGGGAGAGTCACTGAAA +
Preference number: 6 (lower is better)
Translates to: MHSELQYWRPYR*LLIPEVGESLK
Trigger: TTTCAGTGACTCTCCCACCTCGGGTATCAGAAGTCATCGGTACGGTCTCCAATACTGTAGCTCAGAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CACTCTGGGGGCGAAACTGGCAGTTTGGAGTCATATTaGAATGCAAACAGTTTTCTGGACCAAAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: HSGGETGSLESY*NANSFLDQRAL
Trigger: CAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp ATTGAAATGCAAACAGTTTTCTGGACCAAAGGGCTCTaGGGTGACATCAGGCCTAGCAAAGGAGGAATAGGC +
Preference number: 6 (lower is better)
Translates to: IEMQTVFWTKGL*GDIRPSKGGIG
Trigger: GCCTATTCCTCCTTTGCTAGGCCTGATGTCACCGCAGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp AAGTCTTCTTGCACAGCTGGTGTCATGTTGTCATACTaGGACATGATAGGCCCTTTTACCTTCTGCCGTGCT +
Preference number: 6 (lower is better)
Translates to: KSSCTAGVMLSY*DMIGPFTFCRA
Trigger: AGCACGGCAGAAGGTAAAAGGGCCTATCATGTCGCAGTATGACAACATGACACCAGCTGTGCAAGAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp TGTGGCTCCAACTTATTGTGGTGTGGAGGAACACTCTaGGGGCGAAACTGGCAGTTTGGAGTCATATTGAAA +
Preference number: 6 (lower is better)
Translates to: CGSNLLWCGGTL*GRNWQFGVILK
Trigger: TTTCAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAGTGTTCCTCCACACCACAATAAGTTGGAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp AGCAAGCTGACTCTATCTGCTTTGATCTCAGCAGGTTaGGTGCCCACACAATGGCAAGGTTTTTCGCATGCA +
Preference number: 6 (lower is better)
Translates to: SKLTLSALISAG*VPTQWQGFSHA
Trigger: TGCATGCGAAAAACCTTGCCATTGTGTGGGCACCAAACCTGCTGAGATCAAAGCAGATAGAGTCAGCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 90 bp CATAATCTAACTGGCCAGCTCCCTGGGGATAAGGTGGTCCATTTTTaGATTCACATAATTGCCTATGGCTTGCTTCCTGATGCGCCCTGT +
Preference number: 6 (lower is better)
Translates to: HNLTGQLPGDKVVHF*IHIIAYGLLPDAPC
Trigger: ACAGGGCGCATCAGGAAGCAAGCCATAGGCAATTATGTGAATCAAAAAATGGACCACCTTATCCCCAGGGAGCTGGCCAGTTAGATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp TCCAGACACTCTGACTCAGCTTTTGGAGGACTACATTaGAATGACATGGGATCAAAGTCCAGACTGGCCACT +
Preference number: 6 (lower is better)
Translates to: SRHSDSAFGGLH*NDMGSKSRLAT
Trigger: AGTGGCCAGTCTGGACTTTGATCCCATGTCATTTCAATGTAGTCCTCCAAAAGCTGAGTCAGAGTGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp TCACAACCGAATACTCTCTCTTTCAAGATGCCCCGCTaGTTTAGCTTCTGTTTTGTTGGGCGAGACTTCATG +
Preference number: 6 (lower is better)
Translates to: SQPNTLSFKMPR*FSFCFVGRDFM
Trigger: CATGAAGTCTCGCCCAACAAAACAGAAGCTAAAGCAGCGGGGCATCTTGAAAGAGAGAGTATTCGGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS CCA 72 bp GACTACATTGAAATGACATGGGATCAAAGTCCAGACTaGCCACTCCGATGTCTGGTGGACTCAAGTCAACAT +
Preference number: 6 (lower is better)
Translates to: DYIEMTWDQSPD*PLRCLVDSSQH
Trigger: ATGTTGACTTGAGTCCACCAGACATCGGAGTGGCCAGTCTGGACTTTGATCCCATGTCATTTCAATGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp TCTCTCTCACCTGCTTTCATCTTTCCTAGCTGCAGCTaGGTGGGGGATCTATTTATGACATCTCTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SLSPAFIFPSCS*VGDLFMTSLSS
Trigger: GGAAGAAAGAGATGTCATAAATAGATCCCCCACCCAGCTGCAGCTAGGAAAGATGAAAGCAGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp TGGTTTCGATGTAGCGAATTCCCTATTAAGTCTACTTaGTGGAGTTGCTCCCCAGAGTCAGTTGTGTTGGAC +
Preference number: 6 (lower is better)
Translates to: WFRCSEFPIKST*WSCSPESVVLD
Trigger: GTCCAACACAACTGACTCTGGGGAGCAACTCCACCAAGTAGACTTAATAGGGAATTCGCTACATCGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp ACACTCTGGGGGCGAAACTGGCAGTTTGGAGTCATATaGAAATGCAAACAGTTTTCTGGACCAAAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: TLWGRNWQFGVI*KCKQFSGPKGS
Trigger: AGAGCCCTTTGGTCCAGAAAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTTTCGCCCCCAGAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp AACCAGCATAGTTGTACACGTTCTTTCCTTGTAGCCTaGGATTGTAGAAAGCAAAGTCCCGACTGGACAGGC +
Preference number: 6 (lower is better)
Translates to: NQHSCTRSFLVA*DCRKQSPDWTG
Trigger: GCCTGTCCAGTCGGGACTTTGCTTTCTACAATCCAAGGCTACAAGGAAAGAACGTGTACAACTATGCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp ACTGGCCAGCTCCCTGGGGATAAGGTGGTCCATTTTTaGATTCACATAATTGCCTATGGCTTGCTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: TGQLPGDKVVHF*IHIIAYGLLPD
Trigger: ATCAGGAAGCAAGCCATAGGCAATTATGTGAATCAAAAAATGGACCACCTTATCCCCAGGGAGCTGGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CCCACACAATGGCAAGGTTTTTCGCATGCATATTTGTaGTGGAGCAATAGTCTGCTAGAAGAGACAGGTGTC +
Preference number: 6 (lower is better)
Translates to: PTQWQGFSHAYL*WSNSLLEETGV
Trigger: GACACCTGTCTCTTCTAGCAGACTATTGCTCCATCACAAATATGCATGCGAAAAACCTTGCCATTGTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp TCCACACTTTTGTCCCAAGATGTAGGTGATGCATTCTaGGCTACAGTATTGGAGACCGTACCGATGACTTCT +
Preference number: 6 (lower is better)
Translates to: STLLSQDVGDAF*ATVLETVPMTS
Trigger: AGAAGTCATCGGTACGGTCTCCAATACTGTAGCTCAGAATGCATCACCTACATCTTGGGACAAAAGTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS TCA 72 bp CAAAGTAGAAGGCATGGGAGATTTGTCTGTAAGTTCTaGGGAATGGTGGGGTTTATCCACACTGGTACCAAG +
Preference number: 6 (lower is better)
Translates to: QSRRHGRFVCKF*GMVGFIHTGTK
Trigger: CTTGGTACCAGTGTGGATAAACCCCACCATTCCTCAGAACTTACAGACAAATCTCCCATGCCTTCTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS GCA 72 bp TCTTCTAGGTCGGAACAACTTGGAATCACCGTCAACTaGATGGAGAGAAGTAAGGGACTCTTCACTTTTAGC +
Preference number: 6 (lower is better)
Translates to: SSRSEQLGITVN*MERSKGLFTFS
Trigger: GCTAAAAGTGAAGAGTCCCTTACTTCTCTCCATGCAGTTGACGGTGATTCCAAGTTGTTCCGACCTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp GCTCAGAATCAAATTCATGACGAAGTCTCTGGATATTaGAGGCAACGCCAGAGAGACGATATATCCCATCCA +
Preference number: 6 (lower is better)
Translates to: AQNQIHDEVSGY*RQRQRDDISHP
Trigger: TGGATGGGATATATCGTCTCTCTGGCGTTGCCTCCAATATCCAGAGACTTCGTCATGAATTTGATTCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
ENSMUST00000183121.2
CDS CAA 72 bp TCTGAGGGCTCACTTTCATTACGCTGCAACTTGCGTTaGGAGACAGAAGAGGACTTCCCCAAATTGAAAAAG +
Preference number: 6 (lower is better)
Translates to: SEGSLSLRCNLR*ETEEDFPKLKK
Trigger: CTTTTTCAATTTGGGGAAGTCCTCTTCTGTCTCCAAACGCAAGTTGCAGCGTAATGAAAGTGAGCCCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp AATCCATGCTTGCCTCTCCACCATGTGCTTAATACTTaGGGAGGCATGTCAATAACAGAAACGATGTCTCCC +
Preference number: 6 (lower is better)
Translates to: NPCLPLHHVLNT*GGMSITETMSP
Trigger: GGGAGACATCGTTTCTGTTATTGACATGCCTCCCAAAGTATTAAGCACATGGTGGAGAGGCAAGCATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8
CDS TCA 72 bp ATCTCTTTCTTCCACACTTTTGTCCCAAGATGTAGGTaGTGCATTCTGAGCTACAGTATTGGAGACCGTACC +
Preference number: 6 (lower is better)
Translates to: ISFFHTFVPRCR*CILSYSIGDRT
Trigger: GGTACGGTCTCCAATACTGTAGCTCAGAATGCATCACCTACATCTTGGGACAAAAGTGTGGAAGAAAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CCA 72 bp CTTCTGCATCCTTCTTACTGGGACTCAGTTTATCCCTaGTATAACCTAATGAATCCAGAAAGGAAGCACCAC +
Preference number: 6 (lower is better)
Translates to: LLHPSYWDSVYP*YNLMNPERKHH
Trigger: GTGGTGCTTCCTTTCTGGATTCATTAGGTTATACCAGGGATAAACTGAGTCCCAGTAAGAAGGATGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp ACTGAAATAGGCTCAGATATGTTCATGGAAGGAGATTaGCTTAGCTTCCGCCCAATCTTCGGAGAGAAAGCA +
Preference number: 6 (lower is better)
Translates to: TEIGSDMFMEGD*LSFRPIFGEKA
Trigger: TGCTTTCTCTCCGAAGATTGGGCGGAAGCTAAGCAAATCTCCTTCCATGAACATATCTGAGCCTATTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168954.9
ENSMUST00000174641.8
ENSMUST00000182802.8
CDS CAA 72 bp CGAGACTTCATGAATGTTCGCAAGAAAGTAATGAGCTaGCCGTGCTTTTTAGACACTGGTTTTGGCACTGAG +
Preference number: 6 (lower is better)
Translates to: RDFMNVRKKVMS*PCFLDTGFGTE
Trigger: CTCAGTGCCAAAACCAGTGTCTAAAAAGCACGGCAAGCTCATTACTTTCTTGCGAACATTCATGAAGTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174641.8