Pregenerated sensors for ARHGAP27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034255Ensembl transcript IDs: ENSMUST00000041385.14, ENSMUST00000092557.6, ENSMUST00000107023.3, ENSMUST00000107024.8, ENSMUST00000107024.9, ENSMUST00000136491.3
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGGTCACTGTACCCTCTGAATGGAAGGGCGTTGAAGTCACAGTaGAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: QGSLYPLNGRALKSQ*SGGGKRRASEEVQP Trigger: AGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCACTGTGACTTCAACGCCCTTCCATTCAGAGGGTACAGTGACCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR GCA 90 bp | TCCCCTGGCAGCAGAGACAATGTCAGTAGCTGCTTCATGACCTCTTaGGTAGCATGGGGCCTACAGGGTCTCCACCAAGGCCTGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: SPGSRDNVSSCFMTS*VAWGLQGLHQGLDR Trigger: CCTGTCCAGGCCTTGGTGGAGACCCTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCAGCTACTGACATTGTCTCTGCTGCCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 90 bp | TCACATTTCATGAACTGCCCACCAGGGGTCACTGTACCCTCTGAATaGAAGGGCGTTGAAGTCACAGTGCAGCGGGGGTGGGAAGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: SHFMNCPPGVTVPSE*KGVEVTVQRGWEAE Trigger: CTCCGCTTCCCACCCCCGCTGCACTGTGACTTCAACGCCCTTCCATTCAGAGGGTACAGTGACCCCTGGTGGGCAGTTCATGAAATGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 90 bp | AGAGGCCTCTATTTGTTCTCTTCTGCGCCCTGCTACCATCAGGGCTaGGCTTGCATCAGCCGTACTCACTGGGAGCCCCAAGCTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: RGLYLFSSAPCYHQG*ACISRTHWEPQAPE Trigger: TTCTGGAGCTTGGGGCTCCCAGTGAGTACGGCTGATGCAAGCCCAGCCCTGATGGTAGCAGGGCGCAGAAGAGAACAAATAGAGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR TCA 90 bp | GGAAATGGCCCTAATGGGGACGCGAGAGGGAGAAATCACATTTCATaGACTGCCCACCAGGGGTCACTGTACCCTCTGAATGGAAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: GNGPNGDARGRNHIS*TAHQGSLYPLNGRA Trigger: CGCCCTTCCATTCAGAGGGTACAGTGACCCCTGGTGGGCAGTTCATGAAATGTGATTTCTCCCTCTCGCGTCCCCATTAGGGCCATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 90 bp | GGAAACCAGAACGCCCTCACCAAAATCCCCTCTCCCAGCTGTGGGTaGGTGGTGGTGGTGGAACTAGAAAGACATTCATTTCCCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: GNQNALTKIPSPSCG*VVVVELERHSFPST Trigger: GGTGGAGGGAAATGAATGTCTTTCTAGTTCCACCACCACCACCCACCCACAGCTGGGAGAGGGGATTTTGGTGAGGGCGTTCTGGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 90 bp | AGCAGAGACAATGTCAGTAGCTGCTTCATGACCTCTTGCGTAGCATaGGGCCTACAGGGTCTCCACCAAGGCCTGGACAGGTACAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SRDNVSSCFMTSCVA*GLQGLHQGLDRYRL Trigger: AAGCCTGTACCTGTCCAGGCCTTGGTGGAGACCCTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCAGCTACTGACATTGTCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 90 bp | TTAAGGAAACCAGAACGCCCTCACCAAAATCCCCTCTCCCAGCTGTaGGTGGGTGGTGGTGGTGGAACTAGAAAGACATTCATTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: LRKPERPHQNPLSQL*VGGGGGTRKTFISL Trigger: GAGGGAAATGAATGTCTTTCTAGTTCCACCACCACCACCCACCCACAGCTGGGAGAGGGGATTTTGGTGAGGGCGTTCTGGTTTCCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCGCATCAGGGTGGCACTaGAGCAGAAGGCTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PKLQNACVEPLPQGTVPGASGWH*SRRLRE Trigger: CTCCCTCAGCCTTCTGCTCCAGTGCCACCCTGATGC...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCTCTACCTACAGGCTGTaGTGCAGTGGGGCAGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: GTQPGCRQQLEASIHAAPSTYRL*CSGAGA Trigger: CGCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGA...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAGCATTTACTCTGGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCGTCAGTGGCCTGGGCTaGCAGCCAGGGTCAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: APAFTLVYLQAVLQWGRGVSGLG*QPGSVL Trigger: GAGGACTGACCCTGGCTGCCAGCCCAGGCCACTGAC...GCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCTCTAGAAGCTGGGCTTaGTGTGGGGATAGCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: PKLQNACVEPLPQGTVPGSRSWA*CGDSLC Trigger: GCAAAGGCTATCCCCACAGCAAGCCCAGCTTCTAGA...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTCCCCTCTCCCAGCTGTaGGTGGGTGGTGGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: AQGEREASEKFSGGLHQGPLSQL*VGGGGG Trigger: TCCACCACCACCACCCACCCACAGCTGGGAGAGGGG...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCACCTCTTGCGTAGCATaGGGCCTACAGGGTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GTQPGCRQQLEASIHAAPTSCVA*GLQGLH Trigger: GTGGAGACCCTGTAGGCCCCATGCTACGCAAGAGGT...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGGTCAGTGGCCTGGGCTaGCAGCCAGGGTCAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: REGSIGKVLRRPASGWHWVSGLG*QPGSVL Trigger: GAGGACTGACCCTGGCTGCCAGCCCAGGCCACTGAC...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | CATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGAGCAGAAGGCTAGGCAGTCAGTGGCCTaGGCTGGCAGCCAGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: HRKSSQEACIRVALEQKARQSVA*AGSQGQ Trigger: CTGACCCTGGCTGCCAGCCCAGGCCACTGACTGCCT...AGCCTTCTGCTCCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCAGCATTTACTCTGGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCTGCTTCATGACCTCTTaGGTAGCATGGGGCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: APAFTLVYLQAVLQWGRGCFMTS*VAWGLQ Trigger: CTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCA...GCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTACCTCTTGCGTAGCATaGGGCCTACAGGGTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: AQGEREASEKFSGGLHQGTSCVA*GLQGLH Trigger: GTGGAGACCCTGTAGGCCCCATGCTACGCAAGAGGT...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATGCATCAGGGTGGCACTaGAGCAGAAGGCTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: APGHSARHMRTHNKYGLHASGWH*SRRLRE Trigger: CTCCCTCAGCCTTCTGCTCCAGTGCCACCCTGATGC...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR TCA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCAGAAATCACATTTCATaGACTGCCCACCAGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GTQPGCRQQLEASIHAAPRNHIS*TAHQGS Trigger: TGACCCCTGGTGGGCAGTTCATGAAATGTGATTTCT...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCAGCATTTACTCTGGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCAAGTACTGTGACTTCTaGAAGCCCCAGATTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: APAFTLVYLQAVLQWGRGKYCDF*KPQIAR Trigger: CCTGGCAATCTGGGGCTTGCAGAAGTCACAGTACTT...GCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCAGCATTTACTCTGGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCAGAAATCACATTTCATaGACTGCCCACCAGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: APAFTLVYLQAVLQWGRGRNHIS*TAHQGS Trigger: TGACCCCTGGTGGGCAGTTCATGAAATGTGATTTCT...GCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | CATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGAGCAGAAGGCTTGCTTCATGACCTCTTaGGTAGCATGGGGCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: HRKSSQEACIRVALEQKACFMTS*VAWGLQ Trigger: CTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCA...AGCCTTCTGCTCCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATATCCATAGATTGAGGTaGACGAGGGAGGAAGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: APGHSARHMRTHNKYGLHIHRLR*TREEAG Trigger: GCCCGCTTCCTCCCTCGTGCACCTCAATCTATGGAT...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATCTCCAGCATTTACTCTaGTCTACCTACAGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: APGHSARHMRTHNKYGLHLQHLL*STYRLC Trigger: GCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAG...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATGGTGTAGACAGCAGCTaGAGGCTTCTATTCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: APGHSARHMRTHNKYGLHGVDSS*RLLFML Trigger: CAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACC...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATCTAACCTACACGAAGTaGTCCAGCATTTACTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: APGHSARHMRTHNKYGLHLTYTK*SSIYSG Trigger: ACCAGAGTAAATGCTGGAGCACTTCGTGTAGGTTAG...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR GCA 90 bp | TCCGAAAGAGAAAAAGACCTCACCATAACTAAACTTGAAACAAGCCCATTAAGAGTAATCAAGCTCATTTaGATTTTGCATGAAAACGTG | + |
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Preference number: 2 (lower is better) Translates to: SEREKDLTITKLETSPLRVIKLI*ILHENV Trigger: CACGTTTTCATGCAAAATGCAAATGAGCTTGATTAC...TCTTAATGGGCTTGTTTCAAGTTTAGTTATGGTGAGGTCTTTTTCTCTTTCGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
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| 3UTR TCA 72 bp | TCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCGTaGCTCCCTCTTCTAGAAGCTGGGCTTGCTGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: STYRLCCSGAGA*LPLLEAGLAVG Trigger: CCCCACAGCAAGCCCAGCTTCTAGAAGAGGGAGTCACGCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR TCA 72 bp | GGGGGTGGGTGGAGCTGGGGGCTCAGATCCATAGATTaGGGTGCACGAGGGAGGAAGCGGGCAGTTGACACA | + |
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Preference number: 3 (lower is better) Translates to: GGGWSWGLRSID*GARGRKRAVDT Trigger: TGTGTCAACTGCCCGCTTCCTCCCTCGTGCACCTCAATCTATGGATCTGAGCCCCCAGCTCCACCCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 72 bp | GAATGGAAGGGCGTTGAAGTCACAGTGCAGCGGGGGTaGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: EWKGVEVTVQRG*EAESLRGGPAS Trigger: TGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCACTGTGACTTCAACGCCCTTCCATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCCACAGGTTCAACTGTTaGCCTAAGGCTGTGACCTCC | + |
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Preference number: 3 (lower is better) Translates to: PKLQNACVEPLPQGTVPGHRFNC*PKAVTS Trigger: GGAGGTCACAGCCTTAGGCAAACAGTTGAACCTGTG...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCGCTCAGATCCATAGATaGAGGTGCACGAGGGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PKLQNACVEPLPQGTVPGAQIHR*RCTREE Trigger: TTCCTCCCTCGTGCACCTCAATCTATGGATCTGAGC...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR GCA 72 bp | TGTTTGCCTAAGGCTGTGACCTCCCGGACAGGCCTCTaGATGGCAAGTGGGTACCAGGTAGGCATCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: CLPKAVTSRTGL*MASGYQVGIQP Trigger: TGGCTGGATGCCTACCTGGTACCCACTTGCCATGCAGAGGCCTGTCCGGGAGGTCACAGCCTTAGGCAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 72 bp | AGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTaGCACTGGAGCAGAAGGCTGAGGGAGGCAGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SIGKVLRRPASG*HWSRRLREAVS Trigger: ACTGACTGCCTCCCTCAGCCTTCTGCTCCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR TCA 72 bp | GCAGTTGACACAGGTTCAACTGTTTGCCTAAGGCTGTaGCCTCCCGGACAGGCCTCTGCATGGCAAGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: AVDTGSTVCLRL*PPGQASAWQVG Trigger: ACCCACTTGCCATGCAGAGGCCTGTCCGGGAGGTCACAGCCTTAGGCAAACAGTTGAACCTGTGTCAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR GCA 72 bp | CAGTCCTCCCCTGGCAGCAGAGACAATGTCAGTAGCTaGTTCATGACCTCTTGCGTAGCATGGGGCCTACAG | + |
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Preference number: 3 (lower is better) Translates to: QSSPGSRDNVSS*FMTSCVAWGLQ Trigger: CTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCAGCTACTGACATTGTCTCTGCTGCCAGGGGAGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 72 bp | AATGTCAGTAGCTGCTTCATGACCTCTTGCGTAGCATaGGGCCTACAGGGTCTCCACCAAGGCCTGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: NVSSCFMTSCVA*GLQGLHQGLDR Trigger: CCTGTCCAGGCCTTGGTGGAGACCCTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCAGCTACTGACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 72 bp | TATTTGTTCTCTTCTGCGCCCTGCTACCATCAGGGCTaGGCTTGCATCAGCCGTACTCACTGGGAGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: YLFSSAPCYHQG*ACISRTHWEPQ Trigger: TTGGGGCTCCCAGTGAGTACGGCTGATGCAAGCCCAGCCCTGATGGTAGCAGGGCGCAGAAGAGAACAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATGGATGTAGACAGTGGTaGGGGGCTTTAGGTAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: APGHSARHMRTHNKYGLHGCRQW*GALGRH Trigger: GTGCCTACCTAAAGCCCCCAACCACTGTCTACATCC...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR GCA 72 bp | AGCAGAGACAATGTCAGTAGCTGCTTCATGACCTCTTaGGTAGCATGGGGCCTACAGGGTCTCCACCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SRDNVSSCFMTS*VAWGLQGLHQG Trigger: GCCTTGGTGGAGACCCTGTAGGCCCCATGCTACGCAAGAGGTCATGAAGCAGCTACTGACATTGTCTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 72 bp | ACCTCTAACCTACACGAAGTGCTCCAGCATTTACTCTaGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: TSNLHEVLQHLL*STYRLCCSGAG Trigger: CCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGCACTTCGTGTAGGTTAGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR GCA 72 bp | TGGGGACGCGAGAGGGAGAAATCACATTTCATGAACTaGCCACCAGGGGTCACTGTACCCTCTGAATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: WGREREKSHFMN*PPGVTVPSEWK Trigger: CTTCCATTCAGAGGGTACAGTGACCCCTGGTGGGCAGTTCATGAAATGTGATTTCTCCCTCTCGCGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR GCA 72 bp | TCTTCTAGAAGCTGGGCTTGCTGTGGGGATAGCCTTTaGAGGGAATCAGATCACCTATGGACCCCTGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: SSRSWACCGDSL*RESDHLWTPEV Trigger: TACTTCAGGGGTCCATAGGTGATCTGATTCCCTGCAAAGGCTATCCCCACAGCAAGCCCAGCTTCTAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
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| 3UTR CCA 72 bp | GTGGTTAGTATGAAGAACGTCTGTAGAGAGCGGGTGTaGCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VVSMKNVCRERV*PKERGKHRKSS Trigger: AGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGCCACACCCGCTCTCTACAGACGTTCTTCATACTAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCCAGAGGCCCGGGAGGTaGCCGGGCTGGTGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAGVGSGEPQRRSSLTASQRPGR*PGWWCL Trigger: AAGGCACCACCAGCCCGGCCACCTCCCGGGCCTCTG...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCTCTCCCACACTGGGCTaGGCCGAGGAGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGVGSGEPQRRSSLTASSPTLG*AEEELQ Trigger: CTGCAGCTCCTCCTCGGCTCAGCCCAGTGTGGGAGA...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCCCAGGCCTCCGGGGCTaGGCGAGGGTGAGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PKLQNACVEPLPQGTVPGPGLRG*ARVRLR Trigger: ACGCAGCCTCACCCTCGCTCAGCCCCGGAGGCCTGG...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCGCACCCGTGATCACGTaGACGTCTTCCCAGCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AAGVGSGEPQRRSSLTASAPVIT*TSSQRP Trigger: CGGGCGCTGGGAAGACGTCCACGTGATCACGGGTGC...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | TGCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCCCGGGCCTCGACGGTaGGGATGCATTGCTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: CSGGGKRRASEEVQPHGLPGPRR*GCIAAR Trigger: TCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGG...GAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCAGCTAACGCGGCTGCGCTGGGCTaGGTCCTGCAGCTTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWEAESLRGGPASRPPANAAALG*VLQLNG Trigger: GCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGC...GTTAGCTGGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCGTCCTGGTTGGGAGCTaGCAGCGTGCGCACCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKLQNACVEPLPQGTVPGVLVGS*QRAHQV Trigger: GACCTGGTGCGCACGCTGCCAGCTCCCAACCAGGAC...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCTCCAGTTGTTCCTGGTaGTCTTCCTCCAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAGVGSGEPQRRSSLTASSSCSW*SSSSSS Trigger: CGAGGAGCTGGAGGAAGATCACCAGGAACAACTGGA...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | TGCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCACGGTGCGGATGCATTaGTGCACGAAGCGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSGGGKRRASEEVQPHGLTVRMH*CTKRGT Trigger: TGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGT...GAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCGTCTGTTTCAGGAGTTaGGGGCCTCTGCTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKLQNACVEPLPQGTVPGVCFRS*GPLLPG Trigger: CCCGGGCAGCAGAGGCCCCCAACTCCTGAAACAGAC...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCACATGAGGACGCAGCGGCTGCGCTaGGCTGGGTCCTGCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PERMRRTPAPGHSARHMRTQRLR*AGSCSL Trigger: TAAGCTGCAGGACCCAGCCCAGCGCAGCCGCTGCGT...CCTCATGTGCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCCCCACTGCTCTTGAGTaGACTGGTTGGTGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGVGSGEPQRRSSLTASPTALE*TGWCRA Trigger: TGCTCTACACCAACCAGTTCACTCAAGAGCAGTGGG...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | TGCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCCTTGTCCAGAGTCTTaGTCTTCTCCTCTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGGGKRRASEEVQPHGLPCPES*SSPLEG Trigger: GCCCTCCAGAGGAGAAGATCAAGACTCTGGACAAGG...GAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | CCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCACATGAGGGCTTCAGGGCACCCGTaGTCACGTGGACGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PERMRRTPAPGHSARHMRASGHP*SRGRLP Trigger: GGGAAGACGTCCACGTGATCACGGGTGCCCTGAAGC...CCTCATGTGCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | CATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGAGCAGAAGGCTGGGGTCGTCCACCTGTaGCCGCAGGGCCCGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRKSSQEACIRVALEQKAGVVHL*PQGPAL Trigger: CAGAGCCGGGCCCTGCGGGCACAGGTGGACGACCCC...AGCCTTCTGCTCCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCAGCTAACGTGCGGATGCATTGCTaGACGAAGCGTGGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWEAESLRGGPASRPPANVRMHC*TKRGTG Trigger: CCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCAC...GTTAGCTGGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCAGCTAACTGGTCATGGGCATGCTaGCCTCCTCCATCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWEAESLRGGPASRPPANWSWAC*PPPSLA Trigger: GGCCAGAGATGGAGGAGGCCAGCATGCCCATGACCA...GTTAGCTGGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | TGCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCGGTTCTGGAACACCATaGTCATGGGCATGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSGGGKRRASEEVQPHGLGSGTP*SWACWP Trigger: AGGCCAGCATGCCCATGACCATGGTGTTCCAGAACC...GAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCAAATATGGCTTCCCGTaGTGGTCCTCCAACCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: AAGVGSGEPQRRSSLTASKYGFP*WSSNLT Trigger: GGTAAGGTTGGAGGACCAGCACGGGAAGCCATATTT...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | ACCAGAACGCCCTCACCAAAATCCCCTCTCCCAGCTGTGGGTGGGTGGTGGTGGAGTCGGAGCGTGTCCTaGTTGGGAGCTGGCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRTPSPKSPLPAVGGWWWSRSVS*LGAGSV Trigger: CACGCTGCCAGCTCCCAACCAGGACACGCTCCGACT...CCACCACCACCCACCCACAGCTGGGAGAGGGGATTTTGGTGAGGGCGTTCTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCAAGATGTCCGCGCACTaGTGTAGGATGAGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PKLQNACVEPLPQGTVPGKMSAH*CRMSST Trigger: GGTGGAGCTCATCCTACATCAGTGCGCGGACATCTT...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCTCTGGAGGGCTAGCCTaGGCTGGAGTGTCGCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTQPGCRQQLEASIHAAPSGGLA*AGVSLS Trigger: GGATAGCGACACTCCAGCCCAGGCTAGCCCTCCAGA...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | TGCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCTGGGTCCGAACACTATaGCCACATTCTGCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSGGGKRRASEEVQPHGLWVRTL*PHSAQS Trigger: TGACTGTGCAGAATGTGGCCATAGTGTTCGGACCCA...GAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCCTCCTCCATCTCTaGCCGCAGCAGCGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQGEREASEKFSGGLHQGGLLHL*PQQRGS Trigger: GGACCCACGCTGCTGCGGCCAGAGATGGAGGAGGCC...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | GCTCCAGCATTTACTCTGGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCTGGGGTAGCTCCCACTaGACAGAGGAGTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APAFTLVYLQAVLQWGRGWGSSH*TEESSG Trigger: CCCAGAGGACTCCTCTGTTCAGTGGGAGCTACCCCA...GCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | CCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCACATGAGGCGCACTGATGTAGGATaGGCTCCACCACCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PERMRRTPAPGHSARHMRRTDVG*APPPGS Trigger: AGAACCAGGTGGTGGAGCTCATCCTACATCAGTGCG...CCTCATGTGCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | ACCAGAACGCCCTCACCAAAATCCCCTCTCCCAGCTGTGGGTGGGTGGTGGTGGTGGCCGGGCTGGTGGTaGCTTCAGGTGTTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTPSPKSPLPAVGGWWWWPGWW*LQVFQR Trigger: CCTTTGAAACACCTGAAGGCACCACCAGCCCGGCCA...CCACCACCACCCACCCACAGCTGGGAGAGGGGATTTTGGTGAGGGCGTTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCGCTTGTGCCGGACTCTaGTCAAGTCGCTTTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTQPGCRQQLEASIHAAPACAGL*SSRFPG Trigger: GCCTGGAAAGCGACTTGAGCAGAGTCCGGCACAAGC...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGCAGGGGTGGAGAGCTTaGAAGGCTGCCTCAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: REGSIGKVLRRPASGWHWQGWRA*KAASGR Trigger: GCGGCCTGAGGCAGCCTTCCAAGCTCTCCACCCCTG...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | ACCAGAACGCCCTCACCAAAATCCCCTCTCCCAGCTGTGGGTGGGTGGTGGTGGTCACCTTCCTCCCCTTaGAGCAGGTCTGCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRTPSPKSPLPAVGGWWWSPSSP*SRSADS Trigger: GCTGTCTGCAGACCTGCTCCAAGGGGAGGAAGGTGA...CCACCACCACCCACCCACAGCTGGGAGAGGGGATTTTGGTGAGGGCGTTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGAGCGTGTCCTGGTTaGGAGCTGGCAGCGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQGEREASEKFSGGLHQGGACPG*ELAACA Trigger: TGCGCACGCTGCCAGCTCCCAACCAGGACACGCTCC...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| 3UTR CAA 72 bp | CACCAGGGGTCACTGTACCCTCTGAATGGAAGGGCGTaGAAGTCACAGTGCAGCGGGGGTGGGAAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQGSLYPLNGRA*KSQCSGGGKRR Trigger: TCTCCGCTTCCCACCCCCGCTGCACTGTGACTTCAACGCCCTTCCATTCAGAGGGTACAGTGACCCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.8 |
||
| CDS-3UTR GCA 90 bp | ACATCCCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTTGCGGTACGGAAGGCTaGGGGGCCGGGGCAGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSPRALGQNSVVIKLICICGTEG*GAGAGS Trigger: CGACCCTGCCCCGGCCCCGCAGCCTTCCGTACCGCA...AATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGGGATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCCCTCTTCAGGGTAACTaGCCAGTAATTCGGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKLQNACVEPLPQGTVPGPLQGN*PVIRGS Trigger: ACTACCCCGAATTACTGGCCAGTTACCCTGAAGAGG...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | ACCAGAACGCCCTCACCAAAATCCCCTCTCCCAGCTGTGGGTGGGTGGTGGTGGTCCACCACCTGGTTCTaGAACACCATGGTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRTPSPKSPLPAVGGWWWSTTWF*NTMVMG Trigger: GCCCATGACCATGGTGTTCCAGAACCAGGTGGTGGA...CCACCACCACCCACCCACAGCTGGGAGAGGGGATTTTGGTGAGGGCGTTCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCTGTAGAAGAAGACCCTaGGGCTCTCCTCATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQPGCRQQLEASIHAAPCRRRP*GSPHPS Trigger: ACTGGGATGAGGAGAGCCGCAGGGTCTTCTTCTACA...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGCCTCGACGGTGCGGATaGATTGCTGCACGAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: REGSIGKVLRRPASGWHWPRRCG*IAARSV Trigger: CACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGG...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGCATTTACTCTGGTCTACCTACAGGCTGTGCTGCAGTGGGGCAGGGGCTATGGCTTCCCGTGCTaGTCCTCCAACCTTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: APAFTLVYLQAVLQWGRGYGFPC*SSNLTH Trigger: GTGGGTAAGGTTGGAGGACCAGCACGGGAAGCCATA...GCCCCTGCCCCACTGCAGCACAGCCTGTAGGTAGACCAGAGTAAATGCTGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCACACATTCTTCTTGCTaGATTTGTCTTTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKLQNACVEPLPQGTVPGTHSSC*ICLWGP Trigger: GGGCCCCCAAAGACAAATCCAGCAAGAAGAATGTGT...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR TCA 90 bp | AACATCCCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATGACTCTGCTGGACTGTaGCCTCCCTCCGGCCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NIPAGFGAELCSNQAHLHDSAGL*PPSGPL Trigger: GAGGGGGCCGGAGGGAGGTCACAGTCCAGCAGAGTC...ATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGGGATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR TCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTTTGTCTGGGGTAATTTaGCAGGACCAGCCAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQGEREASEKFSGGLHQGLSGVI*QDQPGG Trigger: ACCCCCTGGCTGGTCCTGTCAAATTACCCCAGACAA...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTATGGCTTCGGAGTCGTaGTGGATCAGGTACTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQGEREASEKFSGGLHQGMASES*WIRYSE Trigger: CTCGGAGTACCTGATCCAGCACGACTCCGAAGCCAT...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGAGGGTGACTCCCAGGTaGTCACGCCCGTGTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRRVTPR*SRPCRG Trigger: ACCCCGACACGGGCGTGACCACCTGGGAGTCACCCT...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTTTGCAGCGACCTACCTGCTTTaGGCTCTCTGCCCGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGFGAELCSNQAHLHFAATYLL*ALCPRR Trigger: CCTCCGCGGGCAGAGAGCCCAAAGCAGGTAGGTCGC...TGCAAAATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATAGGTCTTTGAGTCCTTaGAGAAGGTCAGGACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: APGHSARHMRTHNKYGLHRSLSP*RRSGPR Trigger: GCGGGGTCCTGACCTTCTTCAAGGACTCAAAGACCT...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGGGACCAGCCAGGGGGTaGAACCAAAGGAGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRGPARG*NQRRSG Trigger: CCCGCTTCTCCTTTGGTTGCACCCCCTGGCTGGTCC...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | ACATCCCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTACCAGTGCTCGGTGCTaGGGCGCAGCAGTCGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSPRALGQNSVVIKLICITSARC*GAAVGN Trigger: GTTACCGACTGCTGCGCCGCAGCACCGAGCACTGGT...AATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR CCA 90 bp | CATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGAGCAGAAGGCTGTTGCCTCTCTACATTaGCATACACTGGTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRKSSQEACIRVALEQKAVASLH*HTLVPG Trigger: CCCCGGAACCAGTGTATGCCAATGTAGAGAGGCAAC...AGCCTTCTGCTCCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATACCGTCTTGGTACGATaGAGGACTCCTGCCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APGHSARHMRTHNKYGLHTVLVR*RTPALS Trigger: GGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGT...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGTTGCTGCACGAAGCGTaGCACAGGGCTCCTCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRLLHEA*HRAPLA Trigger: CGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAA...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGAGCAGAAGGCTGCTGCTATGAACTGGTaGAAGTGCGAGAAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRKSSQEACIRVALEQKAAAMNW*KCEKGK Trigger: CTTCCCCTTCTCGCACTTCCACCAGTTCATAGCAGC...AGCCTTCTGCTCCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGATGGCTGCTATGAACTaGTGGAAGTGCGAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: REGSIGKVLRRPASGWHWMAAMN*WKCEKG Trigger: CCCCTTCTCGCACTTCCACCAGTTCATAGCAGCCAT...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | ACATCCCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTGCTCGTTCGGTTGGATaGCGATGCGGCGCCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSPRALGQNSVVIKLICIARSVG*RCGARL Trigger: AAGACGGGCGCCGCATCGCCATCCAACCGAACGAGC...AATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR TCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGTCGCGCTCACACAGTTaGGCCAGCGCGCATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRSRSHS*ASAHPN Trigger: GTTTGGATGCGCGCTGGCTCAACTGTGTGAGCGCGA...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGAGTAGGGGCGCCCAGTaGCCGTGTCTGTGTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRSRGAQ*PCLCVS Trigger: AGACACACACAGACACGGGCACTGGGCGCCCCTACT...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGGAGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTCAGACAGCTCTGAGATaGCTTCGGCAATGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQGEREASEKFSGGLHQGQTALR*LRQWLC Trigger: ACAAAGCCATTGCCGAAGGCATCTCAGAGCTGTCTG...ACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCTCCTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATATGAGCTCCACCACCTaGTTCTGGAACACCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APGHSARHMRTHNKYGLHMSSTT*FWNTMV Trigger: GACCATGGTGTTCCAGAACCAGGTGGTGGAGCTCAT...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGTGGAACTAGAAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACACGCAGGGCCCGGCTCTaGCTTCTGACCAGTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVELERHSFPSTRHVLTRRARL*LLTSFE Trigger: TTCAAAACTGGTCAGAAGGCAGAGCCGGGCCCTGCG...TGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTTCTAGTTCCACCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGAACTAGAAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACACTTGATCTTCTCCTCTaGAGGGCTAGCCTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVELERHSFPSTRHVLTLDLLL*RASLGW Trigger: CCAGCCCAGGCTAGCCCTCCAGAGGAGAAGATCAAG...TGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTTCTAGTTCCACCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGGCTTCGGAGTCGTGCTaGATCAGGTACTCCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRASESC*IRYSEP Trigger: TGGCTCGGAGTACCTGATCCAGCACGACTCCGAAGC...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | CCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTTTGCAGCATCTAGACTCTGCTaGACTGTGACCTCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGFGAELCSNQAHLHFAASRLC*TVTSLR Trigger: CCGGAGGGAGGTCACAGTCCAGCAGAGTCTAGATGC...TGCAAAATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGTGGAACTAGAAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACAGGGCTCAGGCTGGGTTaGATTTCCAGTTGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVELERHSFPSTRHVLTGLRLG*ISSCSW Trigger: CCAGGAACAACTGGAAATGCAACCCAGCCTGAGCCC...TGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTTCTAGTTCCACCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGAACTAGAAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACACGAAATCAGCACTGCTaGGCTCACCTTCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVELERHSFPSTRHVLTRNQHC*AHLPPL Trigger: AAGGGGAGGAAGGTGAGCCCAGCAGTGCTGATTTCG...TGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTTCTAGTTCCACCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGACGATGGAGGACTCCTaGCTTGTCCAGAGTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRTMEDS*LVQSLD Trigger: ATCAAGACTCTGGACAAGGCAGGAGTCCTCCATCGT...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGAATTTACGGAGCTTGTaGCGGACTCTGCTCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRNLRSL*RTLLKS Trigger: CGACTTGAGCAGAGTCCGGCACAAGCTCCGTAAATT...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR GCA 90 bp | ACATCCCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTAAAGCATCTAGACTCTaGTGGACTGTGACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPRALGQNSVVIKLICIKASRL*WTVTSL Trigger: GAGGGAGGTCACAGTCCAGCAGAGTCTAGATGCTTT...AATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGAACTAGAAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACAAACAGAGGAGTCCTCTaGGTTGTAGAAATATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVELERHSFPSTRHVLTNRGVL*VVEIWL Trigger: AAGCCATATTTCTACAACCCAGAGGACTCCTCTGTT...TGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTTCTAGTTCCACCACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS GCA 90 bp | CGGGCCGCACGTAAAGGCAGGCGGGCCCTCCCGGAGCCAGGCTGTTaGGCTGGCCACCGGTGCGCTGTCGTGCAGGGCCACACAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAARKGRRALPEPGC*AGHRCAVVQGHTGS Trigger: GCTCCCTGTGTGGCCCTGCACGACAGCGCACCGGTGGCCAGCGCAACAGCCTGGCTCCGGGAGGGCCCGCCTGCCTTTACGTGCGGCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092557.6 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCTCAGGGGTGGAGAGCTaGGAAGGCTGCCTCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAGVGSGEPQRRSSLTASSGVES*EGCLRP Trigger: CGGCCTGAGGCAGCCTTCCAAGCTCTCCACCCCTGA...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS CCA 90 bp | CAGCCCCCGGGCCTCGACGGTGCGGATGCATTGCTGCACGAAGCGTaGCACAGGGCTCCTCTCGCGCTCACACAGTTGAGCCAGCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPPGLDGADALLHEA*HRAPLALTQLSQRA Trigger: TGCGCGCTGGCTCAACTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | GCAGAGATGCTGGATGAGCAGTCGGAGCGTGTCCTGGTTGGGAGCTaGCAGCGTGCGCACCAGGTCACGCACGCAGCGGCTGCGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEMLDEQSERVLVGS*QRAHQVTHAAAALG Trigger: GCCCAGCGCAGCCGCTGCGTGCGTGACCTGGTGCGCACGCTGCCAGCTCCCAACCAGGACACGCTCCGACTGCTCATCCAGCATCTCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCCGGAGCGTGTCCTGGTaGGGAGCTGGCAGCGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PKLQNACVEPLPQGTVPGRSVSW*GAGSVR Trigger: GCGCACGCTGCCAGCTCCCAACCAGGACACGCTCCG...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS GCA 90 bp | CCTCCGGCCCCCTCGCTCGCAGCGACCTACCTGCTTTGGGCTCTCTaGCCGCGGAGGGCAGCGCAAGTCCGGAATGGCCTCGTAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: PPAPSLAATYLLWAL*PRRAAQVRNGLVDI Trigger: AATGTCTACGAGGCCATTCCGGACTTGCGCTGCCCTCCGCGGGCAGAGAGCCCAAAGCAGGTAGGTCGCTGCGAGCGAGGGGGCCGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS TCA 90 bp | GCTTGTGCCGGACTCTGCTCAAGTCGCTTTCCAGGCCTCCGGGGCTaGGCGAGGGTGAGGCTGCGTTCTGCCGTACATCCTCCTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ACAGLCSSRFPGLRG*ARVRLRSAVHPPPA Trigger: GGCGGGAGGAGGATGTACGGCAGAACGCAGCCTCACCCTCGCTCAGCCCCGGAGGCCTGGAAAGCGACTTGAGCAGAGTCCGGCACAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | CCAGGCTCTCCCCGCTACCCACAGAGGCCCGGGAGGTGGCCGGGCTaGTGGTGCCTTCAGGTGTTTCAAAGGGTGACTCCCAGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSPRYPQRPGRWPG*WCLQVFQRVTPRWS Trigger: TGACCACCTGGGAGTCACCCTTTGAAACACCTGAAGGCACCACCAGCCCGGCCACCTCCCGGGCCTCTGTGGGTAGCGGGGAGAGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
||
| CDS TCA 90 bp | GACTCTGCTCAAGTCGCTTTCCAGGCCTCCGGGGCTGAGCGAGGGTaGGGCTGCGTTCTGCCGTACATCCTCCTCCCGCCAGCTTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSAQVAFQASGAERG*GCVLPYILLPPASE Trigger: CTCGGAAGCTGGCGGGAGGAGGATGTACGGCAGAACGCAGCCTCACCCTCGCTCAGCCCCGGAGGCCTGGAAAGCGACTTGAGCAGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS GCA 90 bp | GGTACAGCCCATCAATATCCAGCCCCCGGGCCTCGACGGTGCGGATaGATTGCTGCACGAAGCGTGGCACAGGGCTCCTCTCGCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTAHQYPAPGPRRCG*IAARSVAQGSSRAH Trigger: GTGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATATTGATGGGCTGTACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | GGAGCTGGCAGCGTGCGCACCAGGTCACGCACGCAGCGGCTGCGCTaGGCTGGGTCCTGCAGCTTAATGGCTGCTATGAACTGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAGSVRTRSRTQRLR*AGSCSLMAAMNWWK Trigger: CTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGCTGCGTGCGTGACCTGGTGCGCACGCTGCCAGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS TCA 90 bp | CCGGGAGGTGGCCGGGCTGGTGGTGCCTTCAGGTGTTTCAAAGGGTaGCTCCCAGGTGGTCACGCCCGTGTCGGGGTTGTAGTAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGGRAGGAFRCFKG*LPGGHARVGVVVVG Trigger: CCCTACTACTACAACCCCGACACGGGCGTGACCACCTGGGAGTCACCCTTTGAAACACCTGAAGGCACCACCAGCCCGGCCACCTCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
||
| CDS GCA 90 bp | AGCCCATCAATATCCAGCCCCCGGGCCTCGACGGTGCGGATGCATTaGTGCACGAAGCGTGGCACAGGGCTCCTCTCGCGCTCACACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSISSPRASTVRMH*CTKRGTGLLSRSHS Trigger: ACTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATATTGATGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | TGGCAGCGTGCGCACCAGGTCACGCACGCAGCGGCTGCGCTGGGCTaGGTCCTGCAGCTTAATGGCTGCTATGAACTGGTGGAAGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WQRAHQVTHAAAALG*VLQLNGCYELVEVR Trigger: TCGCACTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGCTGCGTGCGTGACCTGGTGCGCACGCTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS GCA 90 bp | CCTCCCAGGCCGTCTCACCGGTCAAGGGGTTGTAGAAGAAGACCCTaGGGCTCTCCTCATCCCAGTACTGGCCCCACTCTGTCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRPSHRSRGCRRRP*GSPHPSTGPTLSPG Trigger: GCCTGGAGACAGAGTGGGGCCAGTACTGGGATGAGGAGAGCCGCAGGGTCTTCTTCTACAACCCCTTGACCGGTGAGACGGCCTGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | CAGGAGTTGGGGGCCTCTGCTGCCCGGGGCTTCGCGGGCTCAGGCTaGGTTGCATTTCCAGTTGTTCCTGGTGATCTTCCTCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QELGASAARGFAGSG*VAFPVVPGDLPPAP Trigger: AGGAGCTGGAGGAAGATCACCAGGAACAACTGGAAATGCAACCCAGCCTGAGCCCGCGAAGCCCCGGGCAGCAGAGGCCCCCAACTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | CGTTCTGCCGTACATCCTCCTCCCGCCAGCTTCCGAGGCGCTCACTaGACCCGAAATCAGCACTGCTGGGCTCACCTTCCTCCCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSAVHPPPASFRGAH*TRNQHCWAHLPPLG Trigger: TCCAAGGGGAGGAAGGTGAGCCCAGCAGTGCTGATTTCGGGTCCAGTGAGCGCCTCGGAAGCTGGCGGGAGGAGGATGTACGGCAGAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCGGGGGTGGGAAGCGGAGAGCCTCAGAGGAGGTCCAGCCTCACGGCCTCCGGGTTGCATTTCCAGTaGTTCCTGGTGATCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAGVGSGEPQRRSSLTASGLHFQ*FLVIFL Trigger: GAGGAAGATCACCAGGAACAACTGGAAATGCAACCC...GGAGGCCGTGAGGCTGGACCTCCTCTGAGGCTCTCCGCTTCCCACCCCCGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS TCA 90 bp | TGGAAGGCTGCCTCAGGCCGCCTGCAGCTGAGGTCTTTGAGTCCTTaGAGAAGGTCAGGACCCCGCCCTCCAACACTGTCCAGGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WKAASGRLQLRSLSP*RRSGPRPPTLSRRC Trigger: GCACCTCCTGGACAGTGTTGGAGGGCGGGGTCCTGACCTTCTTCAAGGACTCAAAGACCTCAGCTGCAGGCGGCCTGAGGCAGCCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | CGGCTGCGCTGGGCTGGGTCCTGCAGCTTAATGGCTGCTATGAACTaGTGGAAGTGCGAGAAGGGGAAGAGAGGTTCCGGCAGCTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLRWAGSCSLMAAMN*WKCEKGKRGSGSSR Trigger: CCGAGAGCTGCCGGAACCTCTCTTCCCCTTCTCGCACTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCCGGGCTCAGGCTGGGTaGCATTTCCAGTTGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTQPGCRQQLEASIHAAPRAQAG*HFQLFL Trigger: CAGGAACAACTGGAAATGCAACCCAGCCTGAGCCCG...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCTCCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCTGGAGGACTCCTGCCTaGTCCAGAGTCTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PKLQNACVEPLPQGTVPGWRTPA*SRVLIF Trigger: GAAGATCAAGACTCTGGACAAGGCAGGAGTCCTCCA...GCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGGAGCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CAA 90 bp | ACATCCCCGCGGGCTTTGGGGCAGAACTCTGTAGTAATCAAGCTCATTTGCATTCCCGGAGCCAGGCTGTaGCGCTGGCCACCGGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPRALGQNSVVIKLICIPGARL*RWPPVR Trigger: GCGCACCGGTGGCCAGCGCAACAGCCTGGCTCCGGG...AATGCAAATGAGCTTGATTACTACAGAGTTCTGCCCCAAAGCCCGCGGGGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
||
| CDS TCA 90 bp | GCTGGGCTCACCTTCCTCCCCTTGGAGCAGGTCTGCAGACAGCTCTaGGATGCCTTCGGCAATGGCTTTGTGCCAGGTGCTGATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLTFLPLEQVCRQL*DAFGNGFVPGADDG Trigger: GCCATCATCAGCACCTGGCACAAAGCCATTGCCGAAGGCATCTCAGAGCTGTCTGCAGACCTGCTCCAAGGGGAGGAAGGTGAGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | CTGCGCTGGGCTGGGTCCTGCAGCTTAATGGCTGCTATGAACTGGTaGAAGTGCGAGAAGGGGAAGAGAGGTTCCGGCAGCTCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRWAGSCSLMAAMNW*KCEKGKRGSGSSRK Trigger: CTTCCGAGAGCTGCCGGAACCTCTCTTCCCCTTCTCGCACTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCGCCTTGTCCAGAGTCTaGATCTTCTCCTCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTQPGCRQQLEASIHAAPALSRV*IFSSGG Trigger: CCCTCCAGAGGAGAAGATCAAGACTCTGGACAAGGC...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CAA 90 bp | CCAGAACGCATGCGTAGAACCCCTGCCCCAGGGCACAGTGCCAGGCACATGAGGTTGCTGGATTTGTCTTaGGGGGCCCAAGAGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PERMRRTPAPGHSARHMRLLDLS*GAQERE Trigger: CTCTCTCTCTTGGGCCCCCAAAGACAAATCCAGCAA...CCTCATGTGCCTGGCACTGTGCCCTGGGGCAGGGGTTCTACGCATGCGTTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGGACGGTGCGGATGCATaGCTGCACGAAGCGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: REGSIGKVLRRPASGWHWDGADA*LHEAWH Trigger: GTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTC...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS CCA 90 bp | CCTGCCTTGTCCAGAGTCTTGATCTTCTCCTCTGGAGGGCTAGCCTaGGCTGGAGTGTCGCTATCCTGGCTGGATTTGCGGACACTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PALSRVLIFSSGGLA*AGVSLSWLDLRTLR Trigger: CCGAAGTGTCCGCAAATCCAGCCAGGATAGCGACACTCCAGCCCAGGCTAGCCCTCCAGAGGAGAAGATCAAGACTCTGGACAAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | TCACTGGACCCGAAATCAGCACTGCTGGGCTCACCTTCCTCCCCTTaGAGCAGGTCTGCAGACAGCTCTGAGATGCCTTCGGCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLDPKSALLGSPSSP*SRSADSSEMPSAMA Trigger: AGCCATTGCCGAAGGCATCTCAGAGCTGTCTGCAGACCTGCTCCAAGGGGAGGAAGGTGAGCCCAGCAGTGCTGATTTCGGGTCCAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 90 bp | TGGTCATGGGCATGCTGGCCTCCTCCATCTCTGGCCGCAGCAGCGTaGGTCCGAACACTATGGCCACATTCTGCACAGTCATACGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSWACWPPPSLAAAA*VRTLWPHSAQSYGS Trigger: AGAACCGTATGACTGTGCAGAATGTGGCCATAGTGTTCGGACCCACGCTGCTGCGGCCAGAGATGGAGGAGGCCAGCATGCCCATGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGGCACAGTGCCAGGCACATGAGGACCCACAATAAATATGGACTGCATAGTCTGTTTCAGGAGTaGGGGGCCTCTGCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: APGHSARHMRTHNKYGLHSLFQE*GASAAR Trigger: CCGGGCAGCAGAGGCCCCCAACTCCTGAAACAGACT...ATGCAGTCCATATTTATTGTGGGTCCTCATGTGCCTGGCACTGTGCCCTGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS TCA 90 bp | CGCGCTCACACAGTTGAGCCAGCGCGCATCCAAACACCTGGTCTTTaGTGTAGCCCTTGTCCCGCAAAGACTGCAGAGTGGGTCGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAHTVEPARIQTPGL*CSPCPAKTAEWVVS Trigger: AGAGACGACCCACTCTGCAGTCTTTGCGGGACAAGGGCTACATCAAAGACCAGGTGTTTGGATGCGCGCTGGCTCAACTGTGTGAGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 90 bp | AAAGACTGCAGAGTGGGTCGTCTCTGTAGGAATTTACGGAGCTTGTaGCGGACTCTGCTCAAGTCGCTTTCCAGGCCTCCGGGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KDCRVGRLCRNLRSL*RTLLKSLSRPPGLS Trigger: GCTCAGCCCCGGAGGCCTGGAAAGCGACTTGAGCAGAGTCCGGCACAAGCTCCGTAAATTCCTACAGAGACGACCCACTCTGCAGTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAGCCAGGGTGTAGACAGCAGCTGGAGGCTTCTATTCATGCTGCCCCCCCTTACCCACTGCTCTaGAGTGAACTGGTTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GTQPGCRQQLEASIHAAPPYPLL*SELVGV Trigger: TACACCAACCAGTTCACTCAAGAGCAGTGGGTAAGG...GGGGGCAGCATGAATAGAAGCCTCCAGCTGCTGTCTACACCCTGGCTGGGTGCC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS GCA 90 bp | TCGGCAATGGCTTTGTGCCAGGTGCTGATGATGGCTTCGGAGTCGTaGTGGATCAGGTACTCCGAGCCATCTCGGCTTCGAAGCTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SAMALCQVLMMASES*WIRYSEPSRLRSSN Trigger: GTTAGAGCTTCGAAGCCGAGATGGCTCGGAGTACCTGATCCAGCACGACTCCGAAGCCATCATCAGCACCTGGCACAAAGCCATTGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS GCA 90 bp | AACACTATGGCCACATTCTGCACAGTCATACGGTTCTGCTCGCCATaGTCGATGACCCGGCAGAGATGCTGGATGAGCAGTCGGAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTMATFCTVIRFCSP*SMTRQRCWMSSRSV Trigger: CACGCTCCGACTGCTCATCCAGCATCTCTGCCGGGTCATCGAGCATGGCGAGCAGAACCGTATGACTGTGCAGAATGTGGCCATAGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGGAGGTCTTTGAGTCCTaGAAGAAGGTCAGGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: REGSIGKVLRRPASGWHWEVFES*KKVRTP Trigger: CGGGGTCCTGACCTTCTTCAAGGACTCAAAGACCTC...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGCCTTCGGCAATGGCTTaGTGCCAGGTGCTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: REGSIGKVLRRPASGWHWPSAMA*CQVLMM Trigger: CATCATCAGCACCTGGCACAAAGCCATTGCCGAAGG...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
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| CDS CCA 90 bp | GCAATGGCTTTGTGCCAGGTGCTGATGATGGCTTCGGAGTCGTGCTaGATCAGGTACTCCGAGCCATCTCGGCTTCGAAGCTCTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: AMALCQVLMMASESC*IRYSEPSRLRSSNT Trigger: TGTGTTAGAGCTTCGAAGCCGAGATGGCTCGGAGTACCTGATCCAGCACGACTCCGAAGCCATCATCAGCACCTGGCACAAAGCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 90 bp | AAGTCTCTTCCCCTTGTCTACCGTCTTGGTACGATGGAGGACTCCTaGCTTGTCCAGAGTCTTGATCTTCTCCTCTGGAGGGCTAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSLPLVYRLGTMEDS*LVQSLDLLLWRASL Trigger: CAGGCTAGCCCTCCAGAGGAGAAGATCAAGACTCTGGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGTAGACAAGGGGAAGAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGAAGCATCGGAAAAGTTCTCAGGAGGCCTGCATCAGGGTGGCACTGGTTCTTCTTGCTGGATTaGTCTTTGGGGGCCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: REGSIGKVLRRPASGWHWFFLLD*SLGAQE Trigger: CTCTTGGGCCCCCAAAGACAAATCCAGCAAGAAGAA...CCAGTGCCACCCTGATGCAGGCCTCCTGAGAACTTTTCCGATGCTTCCCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
||
| CDS-3UTR CAA 90 bp | AAAGACATTCATTTCCCTCCACCAGGCACGTTCTCACATCCACACAATAGGCGGCTCGCGCTCACACAGTaGAGCCAGCGCGCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDIHFPPPGTFSHPHNRRLALTQ*SQRASK Trigger: TTTGGATGCGCGCTGGCTCAACTGTGTGAGCGCGAG...CCGCCTATTGTGTGGATGTGAGAACGTGCCTGGTGGAGGGAAATGAATGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041385.14 |
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| CDS CCA 90 bp | ACTCCGAGCCATCTCGGCTTCGAAGCTCTAACACATTCTTCTTGCTaGATTTGTCTTTGGGGGCCCAAGAGAGAGAGGCCCCCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TPSHLGFEALTHSSC*ICLWGPKRERPPSV Trigger: AACTGAAGGGGGCCTCTCTCTCTTGGGCCCCCAAAGACAAATCCAGCAAGAAGAATGTGTTAGAGCTTCGAAGCCGAGATGGCTCGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 90 bp | CCACTGCTCTTGAGTGAACTGGTTGGTGTAGAGCATCTGTTTGTCTaGGGTAATTTGACAGGACCAGCCAGGGGGTGCAACCAAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLLLSELVGVEHLFV*GNLTGPARGCNQRR Trigger: TCTCCTTTGGTTGCACCCCCTGGCTGGTCCTGTCAAATTACCCCAGACAAACAGATGCTCTACACCAACCAGTTCACTCAAGAGCAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 ENSMUST00000136491.3 |
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| CDS CCA 72 bp | AGGCAGGCGGGCCCTCCCGGAGCCAGGCTGTTGCGCTaGCCACCGGTGCGCTGTCGTGCAGGGCCACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RQAGPPGARLLR*PPVRCRAGPHR Trigger: CCTGTGTGGCCCTGCACGACAGCGCACCGGTGGCCAGCGCAACAGCCTGGCTCCGGGAGGGCCCGCCTGCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092557.6 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | CCCTCCGGCCCCCTCGCTCGCAGCGACCTACCTGCTTaGGGCTCTCTGCCCGCGGAGGGCAGCGCAAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSGPLARSDLPA*GSLPAEGSASP Trigger: CGGACTTGCGCTGCCCTCCGCGGGCAGAGAGCCCAAAGCAGGTAGGTCGCTGCGAGCGAGGGGGCCGGAGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
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| CDS GCA 72 bp | GCAGTCGGAGCGTGTCCTGGTTGGGAGCTGGCAGCGTaGGCACCAGGTCACGCACGCAGCGGCTGCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGACPGWELAA*APGHARSGCAG Trigger: CCCAGCGCAGCCGCTGCGTGCGTGACCTGGTGCGCACGCTGCCAGCTCCCAACCAGGACACGCTCCGACTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | ACCTCCCTCCGGCCCCCTCGCTCGCAGCGACCTACCTaGTTTGGGCTCTCTGCCCGCGGAGGGCAGCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TSLRPPRSQRPT*FGLSARGGQRK Trigger: CTTGCGCTGCCCTCCGCGGGCAGAGAGCCCAAAGCAGGTAGGTCGCTGCGAGCGAGGGGGCCGGAGGGAGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092557.6 |
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| CDS GCA 72 bp | AGGCCTCCGGGGCTGAGCGAGGGTGAGGCTGCGTTCTaGCGTACATCCTCCTCCCGCCAGCTTCCGAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPGLSEGEAAF*RTSSSRQLPRR Trigger: GCGCCTCGGAAGCTGGCGGGAGGAGGATGTACGGCAGAACGCAGCCTCACCCTCGCTCAGCCCCGGAGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | GGGGCTCGGCAGAGGACCCATCGGCGCCCACCGGGGTaGTCACGAAGCGGTAGTCGTAGGCCAGAGGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GARQRTHRRPPG*SRSGSRRPEVP Trigger: CGGAACCTCTGGCCTACGACTACCGCTTCGTGAGCACCCCGGTGGGCGCCGATGGGTCCTCTGCCGAGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092557.6 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | TCCAGCCCCCGGGCCTCGACGGTGCGGATGCATTGCTaGACGAAGCGTGGCACAGGGCTCCTCTCGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSPRASTVRMHC*TKRGTGLLSRS Trigger: TGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS TCA 72 bp | CTCCCACACTGGGCTGAGCCGAGGAGGAGCTGCAGCTaGGCGAGGCGACGTGGCCCGAGGTTGCCTCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LPHWAEPRRSCS*ARRRGPRLPLY Trigger: GTAGAGAGGCAACCTCGGGCCACGTCGCCTCGCTCAGCTGCAGCTCCTCCTCGGCTCAGCCCAGTGTGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | ATATCCAGCCCCCGGGCCTCGACGGTGCGGATGCATTaGTGCACGAAGCGTGGCACAGGGCTCCTCTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSPRASTVRMH*CTKRGTGLLSR Trigger: GCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | CCCCGCTACCCACAGAGGCCCGGGAGGTGGCCGGGCTaGTGGTGCCTTCAGGTGTTTCAAAGGGTGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PRYPQRPGRWPG*WCLQVFQRVTP Trigger: GGGAGTCACCCTTTGAAACACCTGAAGGCACCACCAGCCCGGCCACCTCCCGGGCCTCTGTGGGTAGCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | CCAGGCTCTCCCCGCTACCCACAGAGGCCCGGGAGGTaGCCGGGCTGGTGGTGCCTTCAGGTGTTTCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSPRYPQRPGR*PGWWCLQVFQR Trigger: CCTTTGAAACACCTGAAGGCACCACCAGCCCGGCCACCTCCCGGGCCTCTGTGGGTAGCGGGGAGAGCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | CTGGATGAGCAGTCGGAGCGTGTCCTGGTTGGGAGCTaGCAGCGTGCGCACCAGGTCACGCACGCAGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LDEQSERVLVGS*QRAHQVTHAAA Trigger: AGCCGCTGCGTGCGTGACCTGGTGCGCACGCTGCCAGCTCCCAACCAGGACACGCTCCGACTGCTCATCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | CGCTACCCACAGAGGCCCGGGAGGTGGCCGGGCTGGTaGTGCCTTCAGGTGTTTCAAAGGGTGACTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RYPQRPGRWPGW*CLQVFQRVTPR Trigger: CCTGGGAGTCACCCTTTGAAACACCTGAAGGCACCACCAGCCCGGCCACCTCCCGGGCCTCTGTGGGTAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | AATATCCAGCCCCCGGGCCTCGACGGTGCGGATGCATaGCTGCACGAAGCGTGGCACAGGGCTCCTCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: NIQPPGLDGADA*LHEAWHRAPLA Trigger: CGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATATT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | CAGCCCATCAATATCCAGCCCCCGGGCCTCGACGGTGCGGATGCATaGCTGCACGAAGCGTGGCACAGGGCTCCTCTCGCGCTCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: QPINIQPPGLDGADA*LHEAWHRAPLALTQ Trigger: CTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATATTGATGGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | ACAGCCCATCAATATCCAGCCCCCGGGCCTCGACGGTaGGGATGCATTGCTGCACGAAGCGTGGCACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TAHQYPAPGPRR*GCIAARSVAQG Trigger: GCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATATTGATGGGCTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 72 bp | GGCCTCGACGGTGCGGATGCATTGCTGCACGAAGCGTaGCACAGGGCTCCTCTCGCGCTCACACAGTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLDGADALLHEA*HRAPLALTQLS Trigger: GCTCAACTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 72 bp | GCGCACCAGGTCACGCACGCAGCGGCTGCGCTGGGCTaGGTCCTGCAGCTTAATGGCTGCTATGAACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AHQVTHAAAALG*VLQLNGCYELV Trigger: CACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGCTGCGTGCGTGACCTGGTGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 72 bp | AGCGTGCGCACCAGGTCACGCACGCAGCGGCTGCGCTaGGCTGGGTCCTGCAGCTTAATGGCTGCTATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SVRTRSRTQRLR*AGSCSLMAAMN Trigger: GTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGCTGCGTGCGTGACCTGGTGCGCACGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS TCA 72 bp | GGCCGGGCTGGTGGTGCCTTCAGGTGTTTCAAAGGGTaGCTCCCAGGTGGTCACGCCCGTGTCGGGGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GRAGGAFRCFKG*LPGGHARVGVV Trigger: TACAACCCCGACACGGGCGTGACCACCTGGGAGTCACCCTTTGAAACACCTGAAGGCACCACCAGCCCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107023.3 ENSMUST00000107024.9 |
||
| CDS GCA 72 bp | CATCAATATCCAGCCCCCGGGCCTCGACGGTGCGGATaGATTGCTGCACGAAGCGTGGCACAGGGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HQYPAPGPRRCG*IAARSVAQGSS Trigger: AGAGGAGCCCTGTGCCACGCTTCGTGCAGCAATGCATCCGCACCGTCGAGGCCCGGGGGCTGGATATTGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CCA 72 bp | CCACCTGGTTCTGGAACACCATGGTCATGGGCATGCTaGCCTCCTCCATCTCTGGCCGCAGCAGCGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPGSGTPWSWAC*PPPSLAAAAWV Trigger: GACCCACGCTGCTGCGGCCAGAGATGGAGGAGGCCAGCATGCCCATGACCATGGTGTTCCAGAACCAGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS CAA 90 bp | AGTTGGGGGCCTCTGCTGCCCGGGGCTTCGCGGGCTCAGGCTGGGTaGCATTTCCAGTTGTTCCTGGTGATCTTCCTCCAGCTCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SWGPLLPGASRAQAG*HFQLFLVIFLQLLG Trigger: ACCGAGGAGCTGGAGGAAGATCACCAGGAACAACTGGAAATGCAACCCAGCCTGAGCCCGCGAAGCCCCGGGCAGCAGAGGCCCCCAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
||
| CDS TCA 72 bp | GCCTCAGGCCGCCTGCAGCTGAGGTCTTTGAGTCCTTaGAGAAGGTCAGGACCCCGCCCTCCAACACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASGRLQLRSLSP*RRSGPRPPTLS Trigger: GGACAGTGTTGGAGGGCGGGGTCCTGACCTTCTTCAAGGACTCAAAGACCTCAGCTGCAGGCGGCCTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | AGCTTCCGAGGCGCTCACTGGACCCGAAATCAGCACTaGTGGGCTCACCTTCCTCCCCTTGGAGCAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SFRGAHWTRNQH*WAHLPPLGAGL Trigger: CAGACCTGCTCCAAGGGGAGGAAGGTGAGCCCAGCAGTGCTGATTTCGGGTCCAGTGAGCGCCTCGGAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | AGGTCACGCACGCAGCGGCTGCGCTGGGCTGGGTCCTaGAGCTTAATGGCTGCTATGAACTGGTGGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRTQRLRWAGS*SLMAAMNWWKC Trigger: GCACTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGCTGCGTGCGTGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | CGGTTCTGCTCGCCATGCTCGATGACCCGGCAGAGATaGTGGATGAGCAGTCGGAGCGTGTCCTGGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RFCSPCSMTRQR*WMSSRSVSWLG Trigger: TCCCAACCAGGACACGCTCCGACTGCTCATCCAGCATCTCTGCCGGGTCATCGAGCATGGCGAGCAGAACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | TTCCGAGGCGCTCACTGGACCCGAAATCAGCACTGCTaGGCTCACCTTCCTCCCCTTGGAGCAGGTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FRGAHWTRNQHC*AHLPPLGAGLQ Trigger: CTGCAGACCTGCTCCAAGGGGAGGAAGGTGAGCCCAGCAGTGCTGATTTCGGGTCCAGTGAGCGCCTCGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | GTACATCCTCCTCCCGCCAGCTTCCGAGGCGCTCACTaGACCCGAAATCAGCACTGCTGGGCTCACCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VHPPPASFRGAH*TRNQHCWAHLP Trigger: AGGAAGGTGAGCCCAGCAGTGCTGATTTCGGGTCCAGTGAGCGCCTCGGAAGCTGGCGGGAGGAGGATGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | TTGGAAGGCTGCCTCAGGCCGCCTGCAGCTGAGGTCTTTGAGTCCTaGAAGAAGGTCAGGACCCCGCCCTCCAACACTGTCCAGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LEGCLRPPAAEVFES*KKVRTPPSNTVQEV Trigger: CACCTCCTGGACAGTGTTGGAGGGCGGGGTCCTGACCTTCTTCAAGGACTCAAAGACCTCAGCTGCAGGCGGCCTGAGGCAGCCTTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | CCGTCTCACCGGTCAAGGGGTTGTAGAAGAAGACCCTaGGGCTCTCCTCATCCCAGTACTGGCCCCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSHRSRGCRRRP*GSPHPSTGPTL Trigger: CAGAGTGGGGCCAGTACTGGGATGAGGAGAGCCGCAGGGTCTTCTTCTACAACCCCTTGACCGGTGAGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | GCGGCTGCGCTGGGCTGGGTCCTGCAGCTTAATGGCTaGTATGAACTGGTGGAAGTGCGAGAAGGGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAALGWVLQLNG*YELVEVREGEE Trigger: CTCTTCCCCTTCTCGCACTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGCCCAGCGCAGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | TTCTGCTCGCCATGCTCGATGACCCGGCAGAGATGCTaGATGAGCAGTCGGAGCGTGTCCTGGTTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FCSPCSMTRQRC*MSSRSVSWLGA Trigger: AGCTCCCAACCAGGACACGCTCCGACTGCTCATCCAGCATCTCTGCCGGGTCATCGAGCATGGCGAGCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | GCATGCTGGCCTCCTCCATCTCTGGCCGCAGCAGCGTaGGTCCGAACACTATGGCCACATTCTGCACAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ACWPPPSLAAAA*VRTLWPHSAQS Trigger: TGACTGTGCAGAATGTGGCCATAGTGTTCGGACCCACGCTGCTGCGGCCAGAGATGGAGGAGGCCAGCATGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | GGGGCTTCGCGGGCTCAGGCTGGGTTGCATTTCCAGTaGTTCCTGGTGATCTTCCTCCAGCTCCTCGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GASRAQAGLHFQ*FLVIFLQLLGL Trigger: GAGACCGAGGAGCTGGAGGAAGATCACCAGGAACAACTGGAAATGCAACCCAGCCTGAGCCCGCGAAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS TCA 72 bp | AAGCGTGGCACAGGGCTCCTCTCGCGCTCACACAGTTaGGCCAGCGCGCATCCAAACACCTGGTCTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: KRGTGLLSRSHS*ASAHPNTWSLM Trigger: CATCAAAGACCAGGTGTTTGGATGCGCGCTGGCTCAACTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | GAAGCGTGGCACAGGGCTCCTCTCGCGCTCACACAGTaGAGCCAGCGCGCATCCAAACACCTGGTCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EAWHRAPLALTQ*SQRASKHLVFD Trigger: ATCAAAGACCAGGTGTTTGGATGCGCGCTGGCTCAACTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | CGCAAAGACTGCAGAGTGGGTCGTCTCTGTAGGAATTTACGGAGCTaGTGCCGGACTCTGCTCAAGTCGCTTTCCAGGCCTCCGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKDCRVGRLCRNLRS*CRTLLKSLSRPPGL Trigger: CAGCCCCGGAGGCCTGGAAAGCGACTTGAGCAGAGTCCGGCACAAGCTCCGTAAATTCCTACAGAGACGACCCACTCTGCAGTCTTTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | TTGCTGCACGAAGCGTGGCACAGGGCTCCTCTCGCGCTCACACAGTaGAGCCAGCGCGCATCCAAACACCTGGTCTTTGATGTAGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLHEAWHRAPLALTQ*SQRASKHLVFDVAL Trigger: AAGGGCTACATCAAAGACCAGGTGTTTGGATGCGCGCTGGCTCAACTGTGTGAGCGCGAGAGGAGCCCTGTGCCACGCTTCGTGCAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | TGGAGCAGGTCTGCAGACAGCTCTGAGATGCCTTCGGCAATGGCTTaGTGCCAGGTGCTGATGATGGCTTCGGAGTCGTGCTGGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSRSADSSEMPSAMA*CQVLMMASESCWIR Trigger: CCTGATCCAGCACGACTCCGAAGCCATCATCAGCACCTGGCACAAAGCCATTGCCGAAGGCATCTCAGAGCTGTCTGCAGACCTGCTCCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | GCTTTGTGCCAGGTGCTGATGATGGCTTCGGAGTCGTaGTGGATCAGGTACTCCGAGCCATCTCGGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ALCQVLMMASES*WIRYSEPSRLR Trigger: TCGAAGCCGAGATGGCTCGGAGTACCTGATCCAGCACGACTCCGAAGCCATCATCAGCACCTGGCACAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | GACTCCTGCCTTGTCCAGAGTCTTGATCTTCTCCTCTaGAGGGCTAGCCTGGGCTGGAGTGTCGCTATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSCLVQSLDLLL*RASLGWSVAIL Trigger: CAGGATAGCGACACTCCAGCCCAGGCTAGCCCTCCAGAGGAGAAGATCAAGACTCTGGACAAGGCAGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | TTGTGCCAGGTGCTGATGATGGCTTCGGAGTCGTGCTaGATCAGGTACTCCGAGCCATCTCGGCTTCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCQVLMMASESC*IRYSEPSRLRS Trigger: GCTTCGAAGCCGAGATGGCTCGGAGTACCTGATCCAGCACGACTCCGAAGCCATCATCAGCACCTGGCACAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | GCTGGGTCCTGCAGCTTAATGGCTGCTATGAACTGGTaGAAGTGCGAGAAGGGGAAGAGAGGTTCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSCSLMAAMNW*KCEKGKRGSGS Trigger: GCTGCCGGAACCTCTCTTCCCCTTCTCGCACTTCCACCAGTTCATAGCAGCCATTAAGCTGCAGGACCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS TCA 72 bp | AGTGCGGTGGGAAGATGTCCGCGCACTGATGTAGGATaGGCTCCACCACCTGGTTCTGGAACACCATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAVGRCPRTDVG*APPPGSGTPWS Trigger: TGACCATGGTGTTCCAGAACCAGGTGGTGGAGCTCATCCTACATCAGTGCGCGGACATCTTCCCACCGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | AGAGTGGGTCGTCTCTGTAGGAATTTACGGAGCTTGTaGCGGACTCTGCTCAAGTCGCTTTCCAGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RVGRLCRNLRSL*RTLLKSLSRPP Trigger: CGGAGGCCTGGAAAGCGACTTGAGCAGAGTCCGGCACAAGCTCCGTAAATTCCTACAGAGACGACCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS GCA 72 bp | GCCACATTCTGCACAGTCATACGGTTCTGCTCGCCATaGTCGATGACCCGGCAGAGATGCTGGATGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ATFCTVIRFCSP*SMTRQRCWMSS Trigger: ACTGCTCATCCAGCATCTCTGCCGGGTCATCGAGCATGGCGAGCAGAACCGTATGACTGTGCAGAATGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | AGTCTTGATCTTCTCCTCTGGAGGGCTAGCCTGGGCTaGAGTGTCGCTATCCTGGCTGGATTTGCGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: SLDLLLWRASLG*SVAILAGFADT Trigger: AGTGTCCGCAAATCCAGCCAGGATAGCGACACTCCAGCCCAGGCTAGCCCTCCAGAGGAGAAGATCAAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS TCA 72 bp | ACAGTTGAGCCAGCGCGCATCCAAACACCTGGTCTTTaGTGTAGCCCTTGTCCCGCAAAGACTGCAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVEPARIQTPGL*CSPCPAKTAEW Trigger: CCACTCTGCAGTCTTTGCGGGACAAGGGCTACATCAAAGACCAGGTGTTTGGATGCGCGCTGGCTCAACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | TGCAGAGTGGGTCGTCTCTGTAGGAATTTACGGAGCTaGTGCCGGACTCTGCTCAAGTCGCTTTCCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRVGRLCRNLRS*CRTLLKSLSRP Trigger: AGGCCTGGAAAGCGACTTGAGCAGAGTCCGGCACAAGCTCCGTAAATTCCTACAGAGACGACCCACTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | ACTGTCCAGGAGGTGCTCCAGTGTTTCTTCCGAAGTCTCTTCCCCTaGTCTACCGTCTTGGTACGATGGAGGACTCCTGCCTTGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TVQEVLQCFFRSLFP*STVLVRWRTPALSR Trigger: TCTGGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGTAGACAAGGGGAAGAGACTTCGGAAGAAACACTGGAGCACCTCCTGGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | CCACTGAACAGAGGAGTCCTCTGGGTTGTAGAAATATaGCTTCCCGTGCTGGTCCTCCAACCTTACCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PLNRGVLWVVEI*LPVLVLQPYPL Trigger: CAGTGGGTAAGGTTGGAGGACCAGCACGGGAAGCCATATTTCTACAACCCAGAGGACTCCTCTGTTCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | CGGCTTCGAAGCTCTAACACATTCTTCTTGCTGGATTaGTCTTTGGGGGCCCAAGAGAGAGAGGCCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RLRSSNTFFLLD*SLGAQEREAPF Trigger: GAAGGGGGCCTCTCTCTCTTGGGCCCCCAAAGACAAATCCAGCAAGAAGAATGTGTTAGAGCTTCGAAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | GAGCCATCTCGGCTTCGAAGCTCTAACACATTCTTCTTGCTGGATTaGTCTTTGGGGGCCCAAGAGAGAGAGGCCCCCTTCAGTTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: EPSRLRSSNTFFLLD*SLGAQEREAPFSST Trigger: AGTCGAACTGAAGGGGGCCTCTCTCTCTTGGGCCCCCAAAGACAAATCCAGCAAGAAGAATGTGTTAGAGCTTCGAAGCCGAGATGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | AGGAGCCCACAGGAGAGTAGTCCTCTTCAGGGTAACTaGCCAGTAATTCGGGGTAGTCTGTTTCAGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSPQESSPLQGN*PVIRGSLFQEL Trigger: CAACTCCTGAAACAGACTACCCCGAATTACTGGCCAGTTACCCTGAAGAGGACTACTCTCCTGTGGGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 ENSMUST00000136491.3 |
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| CDS CCA 72 bp | CGAAGTCTCTTCCCCTTGTCTACCGTCTTGGTACGATaGAGGACTCCTGCCTTGTCCAGAGTCTTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSLFPLSTVLVR*RTPALSRVLIF Trigger: GAAGATCAAGACTCTGGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGTAGACAAGGGGAAGAGACTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | GTTTCTTCCGAAGTCTCTTCCCCTTGTCTACCGTCTTaGTACGATGGAGGACTCCTGCCTTGTCCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSSEVSSPCLPS*YDGGLLPCPES Trigger: AGACTCTGGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGTAGACAAGGGGAAGAGACTTCGGAAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | CATCTCGGCTTCGAAGCTCTAACACATTCTTCTTGCTaGATTTGTCTTTGGGGGCCCAAGAGAGAGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HLGFEALTHSSC*ICLWGPKRERP Trigger: GGGCCTCTCTCTCTTGGGCCCCCAAAGACAAATCCAGCAAGAAGAATGTGTTAGAGCTTCGAAGCCGAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 72 bp | CTGGTTGGTGTAGAGCATCTGTTTGTCTGGGGTAATTaGACAGGACCAGCCAGGGGGTGCAACCAAAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LVGVEHLFVWGN*TGPARGCNQRR Trigger: TCTCCTTTGGTTGCACCCCCTGGCTGGTCCTGTCAAATTACCCCAGACAAACAGATGCTCTACACCAACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 ENSMUST00000136491.3 |
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| CDS CAA 72 bp | TGTTTCTTCCGAAGTCTCTTCCCCTTGTCTACCGTCTaGGTACGATGGAGGACTCCTGCCTTGTCCAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CFFRSLFPLSTV*VRWRTPALSRV Trigger: GACTCTGGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGTAGACAAGGGGAAGAGACTTCGGAAGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | GTGCTCCAGTGTTTCTTCCGAAGTCTCTTCCCCTTGTCTACCGTCTaGGTACGATGGAGGACTCCTGCCTTGTCCAGAGTCTTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLQCFFRSLFPLSTV*VRWRTPALSRVLIF Trigger: GAAGATCAAGACTCTGGACAAGGCAGGAGTCCTCCATCGTACCAAGACGGTAGACAAGGGGAAGAGACTTCGGAAGAAACACTGGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CAA 90 bp | TCTCGGCTTCGAAGCTCTAACACATTCTTCTTGCTGGATTTGTCTTaGGGGGCCCAAGAGAGAGAGGCCCCCTTCAGTTCGACTGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SRLRSSNTFFLLDLS*GAQEREAPFSSTVY Trigger: ATACACAGTCGAACTGAAGGGGGCCTCTCTCTCTTGGGCCCCCAAAGACAAATCCAGCAAGAAGAATGTGTTAGAGCTTCGAAGCCGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 |
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| CDS CCA 72 bp | TTGAGTGAACTGGTTGGTGTAGAGCATCTGTTTGTCTaGGGTAATTTGACAGGACCAGCCAGGGGGTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSELVGVEHLFV*GNLTGPARGCN Trigger: GTTGCACCCCCTGGCTGGTCCTGTCAAATTACCCCAGACAAACAGATGCTCTACACCAACCAGTTCACTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041385.14 ENSMUST00000107024.9 ENSMUST00000136491.3 |
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