Pregenerated sensors for ARHGAP19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025154Ensembl transcript IDs: ENSMUST00000026150.15, ENSMUST00000163265.9, ENSMUST00000177495.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGAGCAAGCGCATGGGGCACCTCTCTCTCACCCAGACCATCCCTaGGCATCGCTTCCCTCTACCCACACTAGGCTCCTCAGTCCCGCG | + |
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Preference number: 1 (lower is better) Translates to: REQAHGAPLSHPDHP*ASLPSTHTRLLSPA Trigger: CGCGGGACTGAGGAGCCTAGTGTGGGTAGAGGGAAGCGATGCCCAGGGATGGTCTGGGTGAGAGAGAGGTGCCCCATGCGCTTGCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 90 bp | GTGGTAACTCACTGCCCAAGAGGCCAGCCACAGAGAGCAAGCGCATaGGGCACCTCTCTCTCACCCAGACCATCCCTGGGCATCGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: VVTHCPRGQPQRASA*GTSLSPRPSLGIAS Trigger: GGAAGCGATGCCCAGGGATGGTCTGGGTGAGAGAGAGGTGCCCCATGCGCTTGCTCTCTGTGGCTGGCCTCTTGGGCAGTGAGTTACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 90 bp | ACAGTTAGTTCCACAGAGCCAGGCCCATACCTCAGCATCCGCAACTaGCACCTGCGGCTCAGGAGACAGTGGCTCTCCACGCTCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: TVSSTEPGPYLSIRN*HLRLRRQWLSTLHH Trigger: GTGGTGGAGCGTGGAGAGCCACTGTCTCCTGAGCCGCAGGTGGCAGTTGCGGATGCTGAGGTATGGGCCTGGCTCTGTGGAACTAACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 90 bp | GGAATGAGTGACAGCATCCTACCCAAGCCAACCAGCCCCTCGGCCTaGTTCTGTTTTCACCACATGCACACTGCAGCAAGCTCCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GMSDSILPKPTSPSA*FCFHHMHTAASSSK Trigger: CTTAGAGGAGCTTGCTGCAGTGTGCATGTGGTGAAAACAGAAGCAGGCCGAGGGGCTGGTTGGCTTGGGTAGGATGCTGTCACTCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 90 bp | GAGCACTCCTTCTCTATAGCCTCTGGACCAAGCATGTCAGGGGCATaGTCAAAAGCTCTTCAGCATGGGCTGTGGCCTCAGGAACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: EHSFSIASGPSMSGA*SKALQHGLWPQELQ Trigger: CTGGAGTTCCTGAGGCCACAGCCCATGCTGAAGAGCTTTTGAGCATGCCCCTGACATGCTTGGTCCAGAGGCTATAGAGAAGGAGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 90 bp | GGAGGACCTTCAGAGTATAGCACATGCTGTGTGGAGGGACCACTGTaGGTTCCCTCAGGCCCCATCAGCTGTGCTTCTAGAATGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GGPSEYSTCCVEGPL*VPSGPISCASRMFQ Trigger: CTGGAACATTCTAGAAGCACAGCTGATGGGGCCTGAGGGAACCCACAGTGGTCCCTCCACACAGCATGTGCTATACTCTGAAGGTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 90 bp | TCCAGAGGAAAGGATGTCACAGAAAAGAGACCTCAGCACACAACCTaGCAGTCAGCATCCTGTGCTGCCTCATCCCCCAGGGTGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SRGKDVTEKRPQHTT*QSASCAASSPRVFP Trigger: AGGAAACACCCTGGGGGATGAGGCAGCACAGGATGCTGACTGGCAGGTTGTGTGCTGAGGTCTCTTTTCTGTGACATCCTTTCCTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 90 bp | CTCTGGACCAAGCATGTCAGGGGCATGCTCAAAAGCTCTTCAGCATaGGCTGTGGCCTCAGGAACTCCAGTTTCCATGGTGACAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LWTKHVRGMLKSSSA*AVASGTPVSMVTKH Trigger: GTGCTTTGTCACCATGGAAACTGGAGTTCCTGAGGCCACAGCCCATGCTGAAGAGCTTTTGAGCATGCCCCTGACATGCTTGGTCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 90 bp | CTTGCTGAAAGGCCTTGGGTGAGAGCACTCCTTCTCTATAGCCTCTaGACCAAGCATGTCAGGGGCATGCTCAAAAGCTCTTCAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: LAERPWVRALLLYSL*TKHVRGMLKSSSAW Trigger: CCATGCTGAAGAGCTTTTGAGCATGCCCCTGACATGCTTGGTCCAGAGGCTATAGAGAAGGAGTGCTCTCACCCAAGGCCTTTCAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 90 bp | GAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATaGGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: ETSSEGVRGISRVRV*VGFHKSKCSKQLQV Trigger: GACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| 3UTR CCA 90 bp | ATCCTCCATCTCCTCACTGCCCTACCTCCACACAGCTTTCAGCACTaGCTGCCTAGTAAAGCCAGCTTTTTGACAGGGAGTCTGACATCA | + |
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Preference number: 1 (lower is better) Translates to: ILHLLTALPPHSFQH*LPSKASFLTGSLTS Trigger: TGATGTCAGACTCCCTGTCAAAAAGCTGGCTTTACTAGGCAGCCAGTGCTGAAAGCTGTGTGGAGGTAGGGCAGTGAGGAGATGGAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 90 bp | GCTCTTCAGCATGGGCTGTGGCCTCAGGAACTCCAGTTTCCATGGTaGCAAAGCACTCAGGTTATTATTTATCCTCCATCTCCTCACTGC | + |
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Preference number: 1 (lower is better) Translates to: ALQHGLWPQELQFPW*QSTQVIIYPPSPHC Trigger: GCAGTGAGGAGATGGAGGATAAATAATAACCTGAGTGCTTTGTCACCATGGAAACTGGAGTTCCTGAGGCCACAGCCCATGCTGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 90 bp | AGAAGGACGGCAGCAACCTTCTGTGACGACGATGGAGCTTCTGTCTaGGTTTCCAAGAAGATACCACAGGTTACAAAGCCACATGTTACA | + |
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Preference number: 1 (lower is better) Translates to: RRTAATFCDDDGASV*VSKKIPQVTKPHVT Trigger: TGTAACATGTGGCTTTGTAACCTGTGGTATCTTCTTGGAAACGCAGACAGAAGCTCCATCGTCGTCACAGAAGGTTGCTGCCGTCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 90 bp | CATCTTAGGAAGCCAGATTCTCTGCAAACTCTGGGACAGTCCTGCTaGTTTAGATCTGGACCCTCACTTCAGTCTGAAGACTTTAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: HLRKPDSLQTLGQSC*FRSGPSLQSEDFRV Trigger: CACTCTAAAGTCTTCAGACTGAAGTGAGGGTCCAGATCTAAACCAGCAGGACTGTCCCAGAGTTTGCAGAGAATCTGGCTTCCTAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 90 bp | TCACTCAAAACCTTCATCTTAGGAAGCCAGATTCTCTGCAAACTCTaGGACAGTCCTGCTGGTTTAGATCTGGACCCTCACTTCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLKTFILGSQILCKL*DSPAGLDLDPHFSL Trigger: CAGACTGAAGTGAGGGTCCAGATCTAAACCAGCAGGACTGTCCCAGAGTTTGCAGAGAATCTGGCTTCCTAAGATGAAGGTTTTGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 90 bp | TTCACCACATGCACACTGCAGCAAGCTCCTCTAAGTAGCAGATCATaGCATTTCCAAAGTGACAGTAACCAGGCACAGAGTGTATCAGTG | + |
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Preference number: 1 (lower is better) Translates to: FTTCTLQQAPLSSRS*HFQSDSNQAQSVSV Trigger: CACTGATACACTCTGTGCCTGGTTACTGTCACTTTGGAAATGTCATGATCTGCTACTTAGAGGAGCTTGCTGCAGTGTGCATGTGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 90 bp | CTTCATCTTAGGAAGCCAGATTCTCTGCAAACTCTGGGACAGTCCTaGTGGTTTAGATCTGGACCCTCACTTCAGTCTGAAGACTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: LHLRKPDSLQTLGQS*WFRSGPSLQSEDFR Trigger: TCTAAAGTCTTCAGACTGAAGTGAGGGTCCAGATCTAAACCAGCAGGACTGTCCCAGAGTTTGCAGAGAATCTGGCTTCCTAAGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR-3UTR CCA 90 bp | GACCTAAGCACACTGAGTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTGGTCAGGGTATGAGTTaGCTTTCACAAGTCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: DLSTLSRCGWPCLPAALCGQGMS*LSQVKM Trigger: CATTTTGACTTGTGAAAGCCAACTCATACCCTGACC...ACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAGTGTGCTTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| 3UTR-3UTR GCA 90 bp | GCCACATGTTACAAGACTCAAAAGGTTATGCTTTTCCTCAAGTCTATTCTGCACACCAGCCCCTCGGCCTaGTTCTGTTTTCACCACATG | + |
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Preference number: 2 (lower is better) Translates to: ATCYKTQKVMLFLKSILHTSPSA*FCFHHM Trigger: CATGTGGTGAAAACAGAAGCAGGCCGAGGGGCTGGT...GTGCAGAATAGACTTGAGGAAAAGCATAACCTTTTGAGTCTTGTAACATGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR-3UTR TCA 90 bp | GCCACATGTTACAAGACTCAAAAGGTTATGCTTTTCCTCAAGTCTATTCTGCACAAAACAAGCAGTTACTaGCACAGAGGAAAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: ATCYKTQKVMLFLKSILHKTSSY*HRGKPQ Trigger: TTGAGGCTTTCCTCTGTGTCAGTAACTGCTTGTTTT...GTGCAGAATAGACTTGAGGAAAAGCATAACCTTTTGAGTCTTGTAACATGTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 72 bp | CACTGCCCAAGAGGCCAGCCACAGAGAGCAAGCGCATaGGGCACCTCTCTCTCACCCAGACCATCCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: HCPRGQPQRASA*GTSLSPRPSLG Trigger: GCCCAGGGATGGTCTGGGTGAGAGAGAGGTGCCCCATGCGCTTGCTCTCTGTGGCTGGCCTCTTGGGCAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 72 bp | GCGCATGGGGCACCTCTCTCTCACCCAGACCATCCCTaGGCATCGCTTCCCTCTACCCACACTAGGCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: AHGAPLSHPDHP*ASLPSTHTRLL Trigger: GAGGAGCCTAGTGTGGGTAGAGGGAAGCGATGCCCAGGGATGGTCTGGGTGAGAGAGAGGTGCCCCATGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 72 bp | TGGGGACCCTGCAGAGACTGCCACTCGTGCCTTTCCTaGTGCCAACCTGCTCTCAGGAGACAGGTGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: WGPCRDCHSCLS*CQPALRRQVSS Trigger: GCTGCTCACCTGTCTCCTGAGAGCAGGTTGGCATCAGGAAAGGCACGAGTGGCAGTCTCTGCAGGGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 72 bp | AGCGTGCACAGGCACGCCTTGCTGAAAGGCCTTGGGTaGGAGCACTCCTTCTCTATAGCCTCTGGACCAAGC | + |
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Preference number: 3 (lower is better) Translates to: SVHRHALLKGLG*EHSFSIASGPS Trigger: GCTTGGTCCAGAGGCTATAGAGAAGGAGTGCTCTCACCCAAGGCCTTTCAGCAAGGCGTGCCTGTGCACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | GACAGCATCCTACCCAAGCCAACCAGCCCCTCGGCCTaGTTCTGTTTTCACCACATGCACACTGCAGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: DSILPKPTSPSA*FCFHHMHTAAS Trigger: GCTTGCTGCAGTGTGCATGTGGTGAAAACAGAAGCAGGCCGAGGGGCTGGTTGGCTTGGGTAGGATGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | ACCTCAGCACACAACCTGCCAGTCAGCATCCTGTGCTaGCTCATCCCCCAGGGTGTTTCCTCATCACTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TSAHNLPVSILC*LIPQGVSSSLL Trigger: CAGGAGTGATGAGGAAACACCCTGGGGGATGAGGCAGCACAGGATGCTGACTGGCAGGTTGTGTGCTGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 72 bp | AAACCAACCGACCTAAGCACACTGAGTAGGTGTGGCTaGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KPTDLSTLSRCG*PCLPAALCKLG Trigger: CCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAGTGTGCTTAGGTCGGTTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| 3UTR CCA 72 bp | CTCTGGGAGGACCTTCAGAGTATAGCACATGCTGTGTaGAGGGACCACTGTGGGTTCCCTCAGGCCCCATCA | + |
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Preference number: 3 (lower is better) Translates to: LWEDLQSIAHAV*RDHCGFPQAPS Trigger: TGATGGGGCCTGAGGGAACCCACAGTGGTCCCTCCACACAGCATGTGCTATACTCTGAAGGTCCTCCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | CCTGGCTGCATCAAGGCACTGCTTGGCTTGCATCCCTaGATAGTGCTACATTCCAGCATGGTGGGGTACACT | + |
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Preference number: 3 (lower is better) Translates to: PGCIKALLGLHP*IVLHSSMVGYT Trigger: AGTGTACCCCACCATGCTGGAATGTAGCACTATGCAGGGATGCAAGCCAAGCAGTGCCTTGATGCAGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | AAGGATGTCACAGAAAAGAGACCTCAGCACACAACCTaGCAGTCAGCATCCTGTGCTGCCTCATCCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KDVTEKRPQHTT*QSASCAASSPR Trigger: CCTGGGGGATGAGGCAGCACAGGATGCTGACTGGCAGGTTGTGTGCTGAGGTCTCTTTTCTGTGACATCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 72 bp | GGCGGGGGCGGGTTCAAACCTGATCACTGGTCTCAGTaGGAAAATCCACTTCTGTGGAACGTCAGAGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GGGGFKPDHWSQ*ENPLLWNVRER Trigger: CCTTTCTCTGACGTTCCACAGAAGTGGATTTTCTCACTGAGACCAGTGATCAGGTTTGAACCCGCCCCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | CAACCAGCCCCTCGGCCTGCTTCTGTTTTCACCACATaGACACTGCAGCAAGCTCCTCTAAGTAGCAGATCA | + |
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Preference number: 3 (lower is better) Translates to: QPAPRPASVFTT*TLQQAPLSSRS Trigger: TGATCTGCTACTTAGAGGAGCTTGCTGCAGTGTGCATGTGGTGAAAACAGAAGCAGGCCGAGGGGCTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | TTCTCTATAGCCTCTGGACCAAGCATGTCAGGGGCATaGTCAAAAGCTCTTCAGCATGGGCTGTGGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FSIASGPSMSGA*SKALQHGLWPQ Trigger: CTGAGGCCACAGCCCATGCTGAAGAGCTTTTGAGCATGCCCCTGACATGCTTGGTCCAGAGGCTATAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 72 bp | CGCTCTCTCTTTCTTGCTCACAGAGTGTGTAACTCCTaGCTGCATCAAGGCACTGCTTGGCTTGCATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: RSLFLAHRVCNS*LHQGTAWLASL Trigger: CAGGGATGCAAGCCAAGCAGTGCCTTGATGCAGCCAGGAGTTACACACTCTGTGAGCAAGAAAGAGAGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 72 bp | CTCCTCACTGCCCTACCTCCACACAGCTTTCAGCACTaGCTGCCTAGTAAAGCCAGCTTTTTGACAGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LLTALPPHSFQH*LPSKASFLTGS Trigger: ACTCCCTGTCAAAAAGCTGGCTTTACTAGGCAGCCAGTGCTGAAAGCTGTGTGGAGGTAGGGCAGTGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | CTCTCTTTCTTGCTCACAGAGTGTGTAACTCCTGGCTaGATCAAGGCACTGCTTGGCTTGCATCCCTGCATA | + |
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Preference number: 3 (lower is better) Translates to: LSFLLTECVTPG*IKALLGLHPCI Trigger: TATGCAGGGATGCAAGCCAAGCAGTGCCTTGATGCAGCCAGGAGTTACACACTCTGTGAGCAAGAAAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 72 bp | AGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATaGGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SEGVRGISRVRV*VGFHKSKCSKQ Trigger: CTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| 3UTR GCA 72 bp | GCAGCAACCTTCTGTGACGACGATGGAGCTTCTGTCTaGGTTTCCAAGAAGATACCACAGGTTACAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: AATFCDDDGASV*VSKKIPQVTKP Trigger: TGGCTTTGTAACCTGTGGTATCTTCTTGGAAACGCAGACAGAAGCTCCATCGTCGTCACAGAAGGTTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | AGGAAGCCAGATTCTCTGCAAACTCTGGGACAGTCCTaGTGGTTTAGATCTGGACCCTCACTTCAGTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RKPDSLQTLGQS*WFRSGPSLQSE Trigger: TTCAGACTGAAGTGAGGGTCCAGATCTAAACCAGCAGGACTGTCCCAGAGTTTGCAGAGAATCTGGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR CCA 72 bp | AAGCCAGATTCTCTGCAAACTCTGGGACAGTCCTGCTaGTTTAGATCTGGACCCTCACTTCAGTCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: KPDSLQTLGQSC*FRSGPSLQSED Trigger: GTCTTCAGACTGAAGTGAGGGTCCAGATCTAAACCAGCAGGACTGTCCCAGAGTTTGCAGAGAATCTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR-3UTR CAA 90 bp | ATCTCACATCACCAAGGTAACAACCACACAGCCATCTCACATCACCAAGGTAACCTGACCTCTTTCTCATaGCCAGGTCAAGTCCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: ISHHQGNNHTAISHHQGNLTSFS*PGQVLY Trigger: ATAGAGGACTTGACCTGGCAATGAGAAAGAGGTCAG...GTTACCTTGGTGATGTGAGATGGCTGTGTGGTTGTTACCTTGGTGATGTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR TCA 72 bp | TGCACACTGCAGCAAGCTCCTCTAAGTAGCAGATCATaGCATTTCCAAAGTGACAGTAACCAGGCACAGAGT | + |
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Preference number: 3 (lower is better) Translates to: CTLQQAPLSSRS*HFQSDSNQAQS Trigger: ACTCTGTGCCTGGTTACTGTCACTTTGGAAATGTCATGATCTGCTACTTAGAGGAGCTTGCTGCAGTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | TCACTCAAAACCTTCATCTTAGGAAGCCAGATTCTCTaGAAACTCTGGGACAGTCCTGCTGGTTTAGATCTG | + |
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Preference number: 3 (lower is better) Translates to: SLKTFILGSQIL*KLWDSPAGLDL Trigger: CAGATCTAAACCAGCAGGACTGTCCCAGAGTTTGCAGAGAATCTGGCTTCCTAAGATGAAGGTTTTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | TGGAACTTAAAATCCACTATAGATCACACACCTCCATaGTCCCAAACTATCCAGCTAGAAGGGAAAACATCA | + |
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Preference number: 3 (lower is better) Translates to: WNLKSTIDHTPP*SQTIQLEGKTS Trigger: TGATGTTTTCCCTTCTAGCTGGATAGTTTGGGAGCATGGAGGTGTGTGATCTATAGTGGATTTTAAGTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| 3UTR GCA 72 bp | GTTACAAAGCCACATGTTACAAGACTCAAAAGGTTATaGTTTTCCTCAAGTCTATTCTGCACTGGATCACAG | + |
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Preference number: 3 (lower is better) Translates to: VTKPHVTRLKRL*FSSSLFCTGSQ Trigger: CTGTGATCCAGTGCAGAATAGACTTGAGGAAAAGCATAACCTTTTGAGTCTTGTAACATGTGGCTTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| CDS-3UTR TCA 90 bp | ACAGAGAGCAAGCGCATGGGGCACCTCTCTCTCACCCAGACCATCCCTGGGCATACTTCACCCATCAGCTaGGCCAACTCAGTTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TESKRMGHLSLTQTIPGHTSPIS*ANSVPG Trigger: GCCGGGAACTGAGTTGGCTCAGCTGATGGGTGAAGT...ATGCCCAGGGATGGTCTGGGTGAGAGAGAGGTGCCCCATGCGCTTGCTCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
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| CDS-3UTR GCA 90 bp | CGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGCCTGAAGAATCCTGCTaGTGGGCCAGCCCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RTASETSSEGVRGISRVRPEESC*WASPSR Trigger: CCTGGAGGGGCTGGCCCAGCAGCAGGATTCTTCAGG...CCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS-3UTR TCA 90 bp | ACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGCCCACTGAAGGAGCGTaGGCGGGCTCTCTTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TDAQLQRHPVRGLEVSVGPTEGA*AGSLLD Trigger: GTCCAGAAGAGAGCCCGCTCACGCTCCTTCAGTGGG...CCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS-3UTR TCA 90 bp | GACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCACCCACTGAAGGAGCGTaGGCGGGCTCTCTTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DAQLQRHPVRGLEVSVGSPTEGA*AGSLLD Trigger: GTCCAGAAGAGAGCCCGCTCACGCTCCTTCAGTGGG...TGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | GACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCACCTGAAGAATCCTGCTaGTGGGCCAGCCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DAQLQRHPVRGLEVSVGSPEESC*WASPSR Trigger: CCTGGAGGGGCTGGCCCAGCAGCAGGATTCTTCAGG...TGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGCCCACTGAAGGAGCGTaGGCGGGCTCTCTTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRHPVRGLEVSVGSGYELPTEGA*AGSLLD Trigger: GTCCAGAAGAGAGCCCGCTCACGCTCCTTCAGTGGG...CAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGGCAGGCACAGAAGGTTCTCTCCCTaGTGTTTGAGTCAGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VGVAGPAYLLHCVSWGRHRRFSP*CLSQRL Trigger: CAGTCTCTGACTCAAACACCAGGGAGAGAACCTTCT...GTGCCTGCCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | GACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAACTTCACCCATCAGCTaGGCCAACTCAGTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DAQLQRHPVRGLEVSVGSTSPIS*ANSVPG Trigger: GCCGGGAACTGAGTTGGCTCAGCTGATGGGTGAAGT...TGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGGCAGGCACACTGTTTTTCTTTTCTaGAGTCATCTGACTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGVAGPAYLLHCVSWGRHTVFLF*SHLTAQ Trigger: CTGGGCAGTCAGATGACTTCAGAAAAGAAAAACAGT...GTGCCTGCCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAACCTGAAGAATCCTGCTaGTGGGCCAGCCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLEVSVGSGYELAFTSQPEESC*WASPSR Trigger: CCTGGAGGGGCTGGCCCAGCAGCAGGATTCTTCAGG...TTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGGCAGTTCGGTGAACACCTCTaGTTTCTCATGTCGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRCGWPCLPAALCKLGQFGEHL*FLMSEF Trigger: AAACTCCGACATGAGAAACCAGAGGTGTTCACCGAA...CTGCCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGGCAGGCACGAGAGTCATTGCAAATaGCAAAATTGCAGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGVAGPAYLLHCVSWGRHESHCK*QNCRWH Trigger: ATGCCATCTGCAATTTTGTCATTTGCAATGACTCTC...GTGCCTGCCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | ACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGACCCTGTTCTGTCTCTaGCATCTTGCCAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDAQLQRHPVRGLEVSVGTLFCL*HLASWK Trigger: CTTCCAGCTGGCAAGATGTCAGAGACAGAACAGGGT...CCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCCTCTACCCACACTAGGCTCCTCAGTCCCGCGCTCTCTCTTTCTTGCTCATTTTCTGAAGTCATCTaGCTGCCCAGGACTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSTHTRLLSPALSLSCSFSEVI*LPRTLR Trigger: GCGCAAAGTCCTGGGCAGTCAGATGACTTCAGAAAA...TGAGCAAGAAAGAGAGAGCGCGGGACTGAGGAGCCTAGTGTGGGTAGAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR GCA 90 bp | CGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGATAAATCTGGGCAATaGCTTCCTCCGTCAACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTASETSSEGVRGISRVRDKSGQ*LPPSTE Trigger: CTCCGTTGACGGAGGAAGGCATTGCCCAGATTTATC...CCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGGCAGGCACGGTTCATATTTTCTTTaGTGGCTTTCTTCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGVAGPAYLLHCVSWGRHGSYFL*WLSSVP Trigger: GGGAACTGAAGAAAGCCAGCAAAGAAAATATGAACC...GTGCCTGCCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTTGGGCCACAGGACATaGGGTGCAAACATAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQLQRHPVRGLEVSVGSGLGHRT*GANIRA Trigger: TGCTCTTATGTTTGCACCCCATGTCCTGTGGCCCAA...CCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GACCTAAGCACACTGAGTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTGGACATGTTATGACATaGGGTTGTCAGATCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLSTLSRCGWPCLPAALCGHVMT*GCQIKV Trigger: GACCTTGATCTGACAACCTCATGTCATAACATGTCC...ACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAGTGTGCTTAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCTGGGTCTCCTCCTGCTaGGAGGAAGGATCTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGYELAFTSQNAASSCRSWVSSC*EEGSTL Trigger: CAGGGTAGATCCTTCCTCTCAGCAGGAGGAGACCCA...GGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAATGAGGAAGAGCAGCTaGAGGGCCTCAATCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGQGMSWLSQVKMQQAAAMRKSS*RASICR Trigger: GCGGCAGATTGAGGCCCTGCAGCTGCTCTTCCTCAT...TGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | CGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGCTGTCTCTGACATCTTaGCAGCTGGAAGGACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTASETSSEGVRGISRVRLSLTS*QLEGHV Trigger: AACATGTCCTTCCAGCTGGCAAGATGTCAGAGACAG...CCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCAGGCACTAGTGGCTTCTGACATTAAAAACAAACACGGAGCACAGCACTCTTCAGTTCCCCCATaGCCACAGACTCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGQALVASDIKNKHGAQHSSVPP*PQTLEQ Trigger: CTGCTCCAGAGTCTGTGGCCATGGGGGAACTGAAGA...GTGCTGTGCTCCGTGTTTGTTTTTAATGTCAGAAGCCACTAGTGCCTGCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | CGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGCCATTTCAATCTTGTTaGTGTCACTGTCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTASETSSEGVRGISRVRPFQSC*CHCPSW Trigger: CCAGCTGGGACAGTGACACCAACAAGATTGAAATGG...CCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| 3UTR CAA 72 bp | TGTGTAACTCCTGGCTGCATCAAGGCACTGCTTGGCTaGCATCCCTGCATAGTGCTACATTCCAGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVTPGCIKALLG*HPCIVLHSSMV Trigger: CACCATGCTGGAATGTAGCACTATGCAGGGATGCAAGCCAAGCAGTGCCTTGATGCAGCCAGGAGTTACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR TCA 90 bp | TGTAAGCTGGGGCAGGCACTAGTGGCTTCTGACATTAAAAACAAACACGGAGCATGGGTCTCCTCCTGCTaGGAGGAAGGATCTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKLGQALVASDIKNKHGAWVSSC*EEGSTL Trigger: CAGGGTAGATCCTTCCTCTCAGCAGGAGGAGACCCA...TGCTCCGTGTTTGTTTTTAATGTCAGAAGCCACTAGTGCCTGCCCCAGCTTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCTGCAGGGCCTCAATCTaGCGCTCCTTGTCTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPCRASI*RSLSGM Trigger: CATACCAGACAAGGAGCGGCAGATTGAGGCCCTGCA...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGAAATGAGGAAGAGCAGCTaGAGGGCCTCAATCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAGPSFTEKRNNTCPTEMRKSS*RASICR Trigger: GCGGCAGATTGAGGCCCTGCAGCTGCTCTTCCTCAT...TTCAGTGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | ACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGAGAAGGTTCTCTCCCTaGTGTTTGAGTCAGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: TDAQLQRHPVRGLEVSVGRRFSP*CLSQRL Trigger: CAGTCTCTGACTCAAACACCAGGGAGAGAACCTTCT...CCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCGAGACATTAGAGACCTaGAGAATCCTGCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGYELAFTSQNAASSCRSETLET*RILLLG Trigger: GCCCAGCAGCAGGATTCTTCAGGTCTCTAATGTCTC...GGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTGAGACATTAGAGACCTaGAGAATCCTGCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGMSWLSQVKMQQAAAGETLET*RILLLG Trigger: GCCCAGCAGCAGGATTCTTCAGGTCTCTAATGTCTC...ACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGGCCACATCATTTGAGTaGAACTCTCCTGAATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDAQLQRHPVRGLEVSVGATSFE*NSPESK Trigger: CTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGC...CCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGACATGTTATGACATaGGGTTGTCAGATCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DAQLQRHPVRGLEVSVGSGHVMT*GCQIKV Trigger: GACCTTGATCTGACAACCTCATGTCATAACATGTCC...TGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR GCA 90 bp | GTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCTGCAGGGCCTCAATCTaGCGCTCCTTGTCTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VSVGSGYELAFTSQNAASCRASI*RSLSGM Trigger: CATACCAGACAAGGAGCGGCAGATTGAGGCCCTGCA...GCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | AGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAATGAGGAAGAGCAGCTaGAGGGCCTCAATCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RYQSGQGMSWLSQVKMQQMRKSS*RASICR Trigger: GCGGCAGATTGAGGCCCTGCAGCTGCTCTTCCTCAT...TTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | AGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCACATCTTCAGCAGCGTaGCCACATCATTTGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRTASETSSEGVRGISRVTSSAA*PHHLSE Trigger: TTCACTCAAATGATGTGGCCACGCTGCTGAAGATGT...GACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTTTGGGCCACAGGACATaGGGTGCAAACATAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FHRRTASETSSEGVRGISLGHRT*GANIRA Trigger: TGCTCTTATGTTTGCACCCCATGTCCTGTGGCCCAA...ACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | TCCACCACTTCCTGTACCCATCCAGACAAGGAGATGGGCAGGAAGCAACTGTTCCCATTTCAATCTTGTTaGTGTCACTGTCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STTSCTHPDKEMGRKQLFPFQSC*CHCPSW Trigger: CCAGCTGGGACAGTGACACCAACAAGATTGAAATGG...GAACAGTTGCTTCCTGCCCATCTCCTTGTCTGGATGGGTACAGGAAGTGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| 3UTR CAA 72 bp | AGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTaGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLEVSVGSGYE*AFTSQNAASSC Trigger: GCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | TCCACCACTTCCTGTACCCATCCAGACAAGGAGATGGGCAGGAAGCAACTGTTCGCCACATCATTTGAGTaGAACTCTCCTGAATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: STTSCTHPDKEMGRKQLFATSFE*NSPESK Trigger: CTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGC...GAACAGTTGCTTCCTGCCCATCTCCTTGTCTGGATGGGTACAGGAAGTGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR TCA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCATTTTCTGAAGTCATCTaGCTGCCCAGGACTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPFSEVI*LPRTLR Trigger: GCGCAAAGTCCTGGGCAGTCAGATGACTTCAGAAAA...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCACATCTTGCCAGCTTTaGCATTTGAGTTCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGSGYELAFTSQNAASSCTSCQL*HLSSGA Trigger: GGCTCCAGAACTCAAATGTCAAAGCTGGCAAGATGT...GCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTACCCTGTTCTGTCTCTaGCATCTTGCCAGCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQGMSWLSQVKMQQAAAGTLFCL*HLASFD Trigger: GTCAAAGCTGGCAAGATGTCAGAGACAGAACAGGGT...ACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCGATAAATCTGGGCAATaGCTTCCTCCGTCAACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGSGYELAFTSQNAASSDKSGQ*LPPSTE Trigger: CTCCGTTGACGGAGGAAGGCATTGCCCAGATTTATC...GCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | AGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAATCTTCAGTTCCCCCATaGCCACAGACTCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYQSGQGMSWLSQVKMQQSSVPP*PQTLEQ Trigger: CTGCTCCAGAGTCTGTGGCCATGGGGGAACTGAAGA...TTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | GTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCTGTCACTGTCCCAGCTaGAGAGCCAGAGAAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVGSGYELAFTSQNAASCHCPS*RAREEQ Trigger: CTGTTCTTCTCTGGCTCTCCAGCTGGGACAGTGACA...GCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | ACAACCACACAGCCATCTCACATCACCAAGGTAACAACCACACAGCCATCTCACTGCTTCTTCGCTGTCTaGTACAGGAGATCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTTQPSHITKVTTTQPSHCFFAV*YRRSSS Trigger: ACTGCTTGATCTCCTGTATCAGACAGCGAAGAAGCA...GTGAGATGGCTGTGTGGTTGTTACCTTGGTGATGTGAGATGGCTGTGTGGTTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR TCA 90 bp | TCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCATGCTTCTTCGCTGTCTaGTACAGGAGATCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGQGMSWLSQVKMQQAAACFFAV*YRRSSS Trigger: ACTGCTTGATCTCCTGTATCAGACAGCGAAGAAGCA...TGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGTGGAAGGACATGTTATaGCATGAGGTTGTCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QRHPVRGLEVSVGSGYELWKDML*HEVVRS Trigger: TGATCTGACAACCTCATGTCATAACATGTCCTTCCA...CAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCACATCACCAAGGTAACAACCACACAGCCATCTCACATCACCAAGGTAACACCCTGTTCTGTCTCTaGCATCTTGCCAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISHHQGNNHTAISHHQGNTLFCL*HLASWK Trigger: CTTCCAGCTGGCAAGATGTCAGAGACAGAACAGGGT...GTTACCTTGGTGATGTGAGATGGCTGTGTGGTTGTTACCTTGGTGATGTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCTGGGGCAGGCACTAGTGGCTTCTGACATTAAAAACAAACACGGAGCATTGGGCCACAGGACATaGGGTGCAAACATAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKLGQALVASDIKNKHGALGHRT*GANIRA Trigger: TGCTCTTATGTTTGCACCCCATGTCCTGTGGCCCAA...TGCTCCGTGTTTGTTTTTAATGTCAGAAGCCACTAGTGCCTGCCCCAGCTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCAGAAGGTTCTCTCCCTaGTGTTTGAGTCAGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGSGYELAFTSQNAASSRRFSP*CLSQRL Trigger: CAGTCTCTGACTCAAACACCAGGGAGAGAACCTTCT...GCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCACATGGCCACAGACTCTaGAGCAGGAGAACTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPHGHRL*SRRTVF Trigger: AAAAACAGTTCTCCTGCTCCAGAGTCTGTGGCCATG...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | GACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCATCATATTTTCTTTGCTaGCTTTCTTCAGTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DAQLQRHPVRGLEVSVGSSYFLC*LSSVPP Trigger: TGGGGGAACTGAAGAAAGCCAGCAAAGAAAATATGA...TGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCACATCACCAAGGTAACAACCACACAGCCATCTCACATCACCAAGGTAACTGTCACTGTCCCAGCTaGAGAGCCAGAGAAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISHHQGNNHTAISHHQGNCHCPS*RAREEQ Trigger: CTGTTCTTCTCTGGCTCTCCAGCTGGGACAGTGACA...GTTACCTTGGTGATGTGAGATGGCTGTGTGGTTGTTACCTTGGTGATGTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR TCA 90 bp | TCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCGAAGATCATTTGCAGTaGCATTTTTGGGCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVGSGYELAFTSQNAASSEDHLQ*HFWATG Trigger: TCCTGTGGCCCAAAAATGTCACTGCAAATGATCTTC...GCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTATCAAGGTCATCCTTTaGCATTTGAGTTCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGMSWLSQVKMQQAAAGIKVIL*HLSSGA Trigger: GGCTCCAGAACTCAAATGTCAAAGGATGACCTTGAT...ACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACTGCAGGGCCTCAATCTaGCGCTCCTTGTCTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LRREITLVPLKRNFTVEDCRASI*RSLSGM Trigger: CATACCAGACAAGGAGCGGCAGATTGAGGCCCTGCA...GTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGGGTTCATATTTTCTTTaGTGGCTTTCTTCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRHPVRGLEVSVGSGYELGSYFL*WLSSVP Trigger: GGGAACTGAAGAAAGCCAGCAAAGAAAATATGAACC...CAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTGTCAGAGACTGCTTATaGAACTGTCTGAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHRRTASETSSEGVRGISVRDCL*NCLRSC Trigger: ACAACTTCTCAGACAGTTCCATAAGCAGTCTCTGAC...ACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGAAGCCACATCATTTGAGTaGAACTCTCCTGAATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAAGPSFTEKRNNTCPTEATSFE*NSPESK Trigger: CTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGC...TTCAGTGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGAAATCAAGGTCATCCTTTaGCATTTGAGTTCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAGPSFTEKRNNTCPTEIKVIL*HLSSGA Trigger: GGCTCCAGAACTCAAATGTCAAAGGATGACCTTGAT...TTCAGTGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGTTTTTCTTTTCTaGAGTCATCTGACTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPTVFLF*SHLTAQ Trigger: CTGGGCAGTCAGATGACTTCAGAAAAGAAAAACAGT...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCGTCAGAGACTGCTTATaGAACTGTCTGAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPVRDCL*NCLRSC Trigger: ACAACTTCTCAGACAGTTCCATAAGCAGTCTCTGAC...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | AGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAACATGGCCACAGACTCTaGAGCAGGAGAACTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYQSGQGMSWLSQVKMQQHGHRL*SRRTVF Trigger: AAAAACAGTTCTCCTGCTCCAGAGTCTGTGGCCATG...TTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGAAGTTCTTCAGTTCCCCCATaGCCACAGACTCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REITLVPLKRNFTVEDRSSSVPP*PQTLEQ Trigger: CTGCTCCAGAGTCTGTGGCCATGGGGGAACTGAAGA...ACTTCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGAGAGACATTAGAGACCTaGAGAATCCTGCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RREITLVPLKRNFTVEDRETLET*RILLLG Trigger: GCCCAGCAGCAGGATTCTTCAGGTCTCTAATGTCTC...TCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCATTTTGAGGTGTACATaGAAATGTTTATGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSGYELAFTSQNAASSCILRCT*KCLWVS Trigger: GCTGACCCATAAACATTTTCATGTACACCTCAAAAT...GCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | CTGACATTAAAAACAAACACGGAGCACAGCACTTCCACAGACGCACAGCTTCAGTGGAAGGACATGTTATaGCATGAGGTTGTCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLKTNTEHSTSTDAQLQWKDML*HEVVRS Trigger: TGATCTGACAACCTCATGTCATAACATGTCCTTCCA...CTGAAGCTGTGCGTCTGTGGAAGTGCTGTGCTCCGTGTTTGTTTTTAATGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR TCA 90 bp | ATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGAAGTAATAAATGGGTCTCCTCCTGCTaGGAGGAAGGATCTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITLVPLKRNFTVEDRSNKWVSSC*EEGSTL Trigger: CAGGGTAGATCCTTCCTCTCAGCAGGAGGAGACCCA...TTTATTACTTCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCACATCACCAAGGTAACAACCACACAGCCATCTCACATCACCAAGGTAACTTCGGTGAACACCTCTaGTTTCTCATGTCGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISHHQGNNHTAISHHQGNFGEHL*FLMSEF Trigger: AAACTCCGACATGAGAAACCAGAGGTGTTCACCGAA...GTTACCTTGGTGATGTGAGATGGCTGTGTGGTTGTTACCTTGGTGATGTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCAGAGAGTCATTGCAAATaGCAAAATTGCAGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKQLQVQASLRREITLVPESHCK*QNCRWH Trigger: ATGCCATCTGCAATTTTGTCATTTGCAATGACTCTC...TGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCGAGAGTCATTGCAAATaGCAAAATTGCAGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVGSGYELAFTSQNAASESHCK*QNCRWH Trigger: ATGCCATCTGCAATTTTGTCATTTGCAATGACTCTC...GCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTATTTTGAGGTGTACATaGAAATGTTTATGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGMSWLSQVKMQQAAAGILRCT*KCLWVS Trigger: GCTGACCCATAAACATTTTCATGTACACCTCAAAAT...ACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACTGCTTCTTCGCTGTCTaGTACAGGAGATCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRREITLVPLKRNFTVEDCFFAV*YRRSSS Trigger: ACTGCTTGATCTCCTGTATCAGACAGCGAAGAAGCA...GTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGATTTTCTGAAGTCATCTaGCTGCCCAGGACTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TEKRNNTCPTEEKLHCRGFSEVI*LPRTLR Trigger: GCGCAAAGTCCTGGGCAGTCAGATGACTTCAGAAAA...TCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAATAAGAGCAAGGTTATaGGCAGACATCTTATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLEVSVGSGYELAFTSQIRARL*ADILFL Trigger: CAAGAATAAGATGTCTGCCCATAACCTTGCTCTTAT...TTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | GTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCATTTTGAGGTGTACATaGAAATGTTTATGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVGSGYELAFTSQNAASILRCT*KCLWVS Trigger: GCTGACCCATAAACATTTTCATGTACACCTCAAAAT...GCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACGAAGATCATTTGCAGTaGCATTTTTGGGCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRREITLVPLKRNFTVEDEDHLQ*HFWATG Trigger: TCCTGTGGCCCAAAAATGTCACTGCAAATGATCTTC...GTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | ATAGATCACACACCTCCATGCTCCCAAACTATCCAGCTAGAAGGGAAAACATCAACTGTTTTTCTTTTCTaGAGTCATCTGACTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDHTPPCSQTIQLEGKTSTVFLF*SHLTAQ Trigger: CTGGGCAGTCAGATGACTTCAGAAAAGAAAAACAGT...TGATGTTTTCCCTTCTAGCTGGATAGTTTGGGAGCATGGAGGTGTGTGATCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR GCA 90 bp | GCCACATGTTACAAGACTCAAAAGGTTATGCTTTTCCTCAAGTCTATTCTGCACCTGTCTCTGACATCTTaGCAGCTGGAAGGACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATCYKTQKVMLFLKSILHLSLTS*QLEGHV Trigger: AACATGTCCTTCCAGCTGGCAAGATGTCAGAGACAG...GTGCAGAATAGACTTGAGGAAAAGCATAACCTTTTGAGTCTTGTAACATGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR GCA 90 bp | ACATTAAAAACAAACACGGAGCACAGCACTTCCACAGACGCACAGCTTCAGAGAGGTTCATATTTTCTTTaGTGGCTTTCTTCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTNTEHSTSTDAQLQRGSYFL*WLSSVP Trigger: GGGAACTGAAGAAAGCCAGCAAAGAAAATATGAACC...TCTCTGAAGCTGTGCGTCTGTGGAAGTGCTGTGCTCCGTGTTTGTTTTTAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGAAATAAGAGCAAGGTTATaGGCAGACATCTTATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAAGPSFTEKRNNTCPTEIRARL*ADILFL Trigger: CAAGAATAAGATGTCTGCCCATAACCTTGCTCTTAT...TTCAGTGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | ACATTAAAAACAAACACGGAGCACAGCACTTCCACAGACGCACAGCTTCAGAGATCATATTTTCTTTGCTaGCTTTCTTCAGTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTNTEHSTSTDAQLQRSYFLC*LSSVPP Trigger: TGGGGGAACTGAAGAAAGCCAGCAAAGAAAATATGA...TCTCTGAAGCTGTGCGTCTGTGGAAGTGCTGTGCTCCGTGTTTGTTTTTAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CCA 90 bp | AGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAATCATATTTTCTTTGCTaGCTTTCTTCAGTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYQSGQGMSWLSQVKMQQSYFLC*LSSVPP Trigger: TGGGGGAACTGAAGAAAGCCAGCAAAGAAAATATGA...TTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGTTCGGTGAACACCTCTaGTTTCTCATGTCGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRREITLVPLKRNFTVEFGEHL*FLMSEF Trigger: AAACTCCGACATGAGAAACCAGAGGTGTTCACCGAA...CTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGAACATCTTCAGCAGCGTaGCCACATCATTTGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKRNNTCPTEEKLHCRGTSSAA*PHHLSE Trigger: TTCACTCAAATGATGTGGCCACGCTGCTGAAGATGT...TCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR TCA 90 bp | ATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGAAGTAATAAAGAAGATCATTTGCAGTaGCATTTTTGGGCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITLVPLKRNFTVEDRSNKEDHLQ*HFWATG Trigger: TCCTGTGGCCCAAAAATGTCACTGCAAATGATCTTC...TTTATTACTTCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CCA 90 bp | CTCAACAATAACACAAGTTCAACTGTCTATCATCAGTGTGGAACCGTATTTTGCATAAGAGCAAGGTTATaGGCAGACATCTTATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNNNTSSTVYHQCGTVFCIRARL*ADILFL Trigger: CAAGAATAAGATGTCTGCCCATAACCTTGCTCTTAT...GCAAAATACGGTTCCACACTGATGATAGACAGTTGAACTTGTGTTATTGTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| 3UTR CAA 72 bp | AGATGTGTTAAATACACTGTACTGACCTCTTTCTCATaGCCAGGTCAAGTCCTCTATATTAGACACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCVKYTVLTSFS*PGQVLYIRHKK Trigger: TTTCTTGTGTCTAATATAGAGGACTTGACCTGGCAATGAGAAAGAGGTCAGTACAGTGTATTTAACACATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS TCA 90 bp | CTGACTGCCCAGGACTTTGCGCTTGATAAGCCCACTGAAGGAGCGTaGGCGGGCTCTCTTCTGGACCCTGGGAGTAGAAGGTTCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTAQDFALDKPTEGA*AGSLLDPGSRRFSP Trigger: GGGAGAGAACCTTCTACTCCCAGGGTCCAGAAGAGAGCCCGCTCACGCTCCTTCAGTGGGCTTATCAAGCGCAAAGTCCTGGGCAGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGCTGGGGCAGGCACGATCAAGGTCATCCTTaGACATTTGAGTTCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGVAGPAYLLHCVSWGRHDQGHP*TFEFWS Trigger: GCTCCAGAACTCAAATGTCAAAGGATGACCTTGATC...GTGCCTGCCCCAGCTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS TCA 90 bp | GGGCCAGCCCCTCCAGGCAGCTTAAGGTCCACTTCACCCATCAGCTaGGCCAACTCAGTTCCCGGCAAATCAATAAGCCTTGTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPAPPGSLRSTSPIS*ANSVPGKSISLVML Trigger: CAACATCACAAGGCTTATTGATTTGCCGGGAACTGAGTTGGCTCAGCTGATGGGTGAAGTGGACCTTAAGCTGCCTGGAGGGGCTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GACCTAAGCACACTGAGTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTTCTGTCTCTGACATCTaGCCAGCTGGAAGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: DLSTLSRCGWPCLPAALCSVSDI*PAGRTC Trigger: ACATGTCCTTCCAGCTGGCAAGATGTCAGAGACAGA...ACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAGTGTGCTTAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | GACCTAAGCACACTGAGTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTTGCTGTCGAACACTGTaGCCTGGTACTCTAAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLSTLSRCGWPCLPAALCCCRTL*PGTLNK Trigger: CTTGTTTAGAGTACCAGGCAACAGTGTTCGACAGCA...ACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAGTGTGCTTAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | ACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTTTAGCAAGTTACGATaGGCTGGAGGGAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TDAQLQRHPVRGLEVSVGFSKLR*AGGRMR Trigger: CCTCATCCTCCCTCCAGCCAATCGTAACTTGCTAAA...CCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGGAACTGTCTGAGAAGTaGTTTCTTCTTCGCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AQLQRHPVRGLEVSVGSGELSEK*FLLRGV Trigger: GACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTC...CCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGCACACTGAGTAGGTGTGGCTGGCCCTGCCTACCTGCTGCACTGTGTAAGTTGCAAATGACAAAATaGCAGATGGCATCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSTLSRCGWPCLPAALCKLQMTK*QMASLR Trigger: CCGGAGTGATGCCATCTGCAATTTTGTCATTTGCAA...CTTACACAGTGCAGCAGGTAGGCAGGGCCAGCCACACCTACTCAGTGTGCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | GCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGCGAAGGGGAGAGTCATaGCAAATGACAAAATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQLQRHPVRGLEVSVGSGRRGES*QMTKLQ Trigger: CTGCAATTTTGTCATTTGCAATGACTCTCCCCTTCG...CCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAATAAGCCTTGTGATGTaGCTGACCACCAATTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DAQLQRHPVRGLEVSVGSISLVM*LTTNSV Trigger: CACCGAATTGGTGGTCAGCAACATCACAAGGCTTAT...TGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGCCTTTTTCTTTCCGCTaGAGAGACATTAGAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTASETSSEGVRGISRVRPFSFR*RDIRDL Trigger: CAGGTCTCTAATGTCTCTCAAGCGGAAAGAAAAAGG...CCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCCAACCAGCCCCTCGGCCTGCTTCTGTTTTCACCACATGCACACTGCATCCACTCGCAAGTTTTaGTGCAGATATTCAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKPTSPSACFCFHHMHTASTRKF*CRYSIS Trigger: GCTGATTGAATATCTGCACAAAAACTTGCGAGTGGA...TGCAGTGTGCATGTGGTGAAAACAGAAGCAGGCCGAGGGGCTGGTTGGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR CAA 90 bp | ACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGGCGTGGCCACATCATTaGAGTGAAACTCTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TDAQLQRHPVRGLEVSVGAWPHH*SETLLN Trigger: ATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGC...CCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAAAGAGACCTCAGCACACAACCTGCCAGTCAGCATCCTGTGCTGCCTCATTTTGCAGTGACATTTTaGGGCCACAGGACATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKRDLSTQPASQHPVLPHFAVTF*GHRTWG Trigger: ACCCCATGTCCTGTGGCCCAAAAATGTCACTGCAAA...ATGAGGCAGCACAGGATGCTGACTGGCAGGTTGTGTGCTGAGGTCTCTTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS TCA 90 bp | AACTGTCTGAGAAGTTGTTTCTTCTTCGCGGAGTCTGGCCAGTTATaGACATGCTGGAAGAGTTCTCTCAGCGCCTCTTCTGTGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NCLRSCFFFAESGQL*TCWKSSLSASSVCC Trigger: GCAGCACACAGAAGAGGCGCTGAGAGAACTCTTCCAGCATGTTCATAACTGGCCAGACTCCGCGAAGAAGAAACAACTTCTCAGACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS CCA 90 bp | TCCTTTTCTCCCCTCTCTCTTCGCCTCAGACCATTTCAATCTTGTTaGTGTCACTGTCCCAGCTGGAGAGCCAGAGAAGAACAGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSPLSLRLRPFQSC*CHCPSWRAREEQVH Trigger: ATGAACCTGTTCTTCTCTGGCTCTCCAGCTGGGACAGTGACACCAACAAGATTGAAATGGTCTGAGGCGAAGAGAGAGGGGAGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTTTTAGCAAGTTACGATaGGCTGGAGGGAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQGMSWLSQVKMQQAAAGFSKLR*AGGRMR Trigger: CCTCATCCTCCCTCCAGCCAATCGTAACTTGCTAAA...ACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCTTTAGCAAGTTACGATaGGCTGGAGGGAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPFSKLR*AGGRMR Trigger: CCTCATCCTCCCTCCAGCCAATCGTAACTTGCTAAA...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCTTTGCAGTGACATTTTaGGGCCACAGGACATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPFAVTF*GHRTWG Trigger: ACCCCATGTCCTGTGGCCCAAAAATGTCACTGCAAA...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS CCA 90 bp | CTGCTTATGGAACTGTCTGAGAAGTTGTTTCTTCTTCGCGGAGTCTaGCCAGTTATGAACATGCTGGAAGAGTTCTCTCAGCGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLMELSEKLFLLRGV*PVMNMLEEFSQRLF Trigger: GAAGAGGCGCTGAGAGAACTCTTCCAGCATGTTCATAACTGGCCAGACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTCCATAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAATAAGCCTTGTGATGTaGCTGACCACCAATTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGQGMSWLSQVKMQQAAAISLVM*LTTNSV Trigger: CACCGAATTGGTGGTCAGCAACATCACAAGGCTTAT...TGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCAATAAGCCTTGTGATGTaGCTGACCACCAATTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPISLVM*LTTNSV Trigger: CACCGAATTGGTGGTCAGCAACATCACAAGGCTTAT...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGACGCACAGCTTCAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCCTTTTTCTTTCCGCTaGAGAGACATTAGAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHRRTASETSSEGVRGISPFSFR*RDIRDL Trigger: CAGGTCTCTAATGTCTCTCAAGCGGAAAGAAAAAGG...ACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTCTGTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCATGCTGTCGAACACTGTaGCCTGGTACTCTAAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPCCRTL*PGTLNK Trigger: CTTGTTTAGAGTACCAGGCAACAGTGTTCGACAGCA...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGAATCTGTCTCTGACATCTaGCCAGCTGGAAGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAGPSFTEKRNNTCPTESVSDI*PAGRTC Trigger: ACATGTCCTTCCAGCTGGCAAGATGTCAGAGACAGA...TTCAGTGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCAGAACTGTCTGAGAAGTaGTTTCTTCTTCGCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPELSEK*FLLRGV Trigger: GACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTC...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCTTCTCTCCCTGGTGTTaGAGTCAGAGACTGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SGYELAFTSQNAASSCRSFSPWC*SQRLLM Trigger: CATAAGCAGTCTCTGACTCAAACACCAGGGAGAGAA...GGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS CCA 90 bp | TCAGCAGGGGCTCGGGTAACTCTCCTAGAAACATCTTCAGCAGCGTaGCCACATCATTTGAGTGAAACTCTCCTGAATCCAAGTCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SAGARVTLLETSSAA*PHHLSETLLNPSQY Trigger: ATATTGACTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGCTGCTGAAGATGTTTCTAGGAGAGTTACCCGAGCCCCTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCTTGCAAATGACAAAATaGCAGATGGCATCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPLQMTK*QMASLR Trigger: CCGGAGTGATGCCATCTGCAATTTTGTCATTTGCAA...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCCGAAGGGGAGAGTCATaGCAAATGACAAAATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQAAAGPSFTEKRNNTCPRRGES*QMTKLQ Trigger: CTGCAATTTTGTCATTTGCAATGACTCTCCCCTTCG...GGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCACCTTTTTCTTTCCGCTaGAGAGACATTAGAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPPFSFR*RDIRDL Trigger: CAGGTCTCTAATGTCTCTCAAGCGGAAAGAAAAAGG...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCAGGCACTAGTGGCTTCTGACATTAAAAACAAACACGGAGCACAGCACTCCACTCGCAAGTTTTaGTGCAGATATTCAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGQALVASDIKNKHGAQHSTRKF*CRYSIS Trigger: GCTGATTGAATATCTGCACAAAAACTTGCGAGTGGA...GTGCTGTGCTCCGTGTTTGTTTTTAATGTCAGAAGCCACTAGTGCCTGCCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCAATATCAGTCCCGTTATaGAGAGCATCCCTCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPISVPL*RASLKS Trigger: GCTTTTGAGGGATGCTCTCAATAACGGGACTGATAT...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CTGACATTAAAAACAAACACGGAGCACAGCACTTCCACAGACGCACAGCTTCAGGCGTGGCCACATCATTaGAGTGAAACTCTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTLKTNTEHSTSTDAQLQAWPHH*SETLLN Trigger: ATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGC...CTGAAGCTGTGCGTCTGTGGAAGTGCTGTGCTCCGTGTTTGTTTTTAATGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | TCCACCACTTCCTGTACCCATCCAGACAAGGAGATGGGCAGGAAGCAACTGTTCAGGTTCATATTTTCTTaGCTGGCTTTCTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STTSCTHPDKEMGRKQLFRFIFS*LAFFSS Trigger: GGAACTGAAGAAAGCCAGCAAAGAAAATATGAACCT...GAACAGTTGCTTCCTGCCCATCTCCTTGTCTGGATGGGTACAGGAAGTGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR CAA 90 bp | CAGAGACATCCAGTGAGGGGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGAGGTTCATATTTTCTTaGCTGGCTTTCTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRHPVRGLEVSVGSGYELRFIFS*LAFFSS Trigger: GGAACTGAAGAAAGCCAGCAAAGAAAATATGAACCT...CAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCACCATTTCAATCTTGTaGGTGTCACTGTCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSVGSGYELAFTSQNAASTISIL*VSLSQL Trigger: CAGCTGGGACAGTGACACCAACAAGATTGAAATGGT...GCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAGCAGCTGCAGGTCCATCTGTCTCTGACATCTaGCCAGCTTTGACATTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGMSWLSQVKMQQAAAGPSVSDI*PALTFE Trigger: CTCAAATGTCAAAGCTGGCAAGATGTCAGAGACAGA...TGGACCTGCAGCTGCTTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177495.2 |
||
| CDS TCA 90 bp | GTTCTCTCCCTGGTGTTTGAGTCAGAGACTGCTTATGGAACTGTCTaGGAAGTTGTTTCTTCTTCGCGGAGTCTGGCCAGTTATGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSLVFESETAYGTV*EVVSSSRSLASYEH Trigger: ATGTTCATAACTGGCCAGACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTCCATAAGCAGTCTCTGACTCAAACACCAGGGAGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS CCA 90 bp | CTTCGCCTCAGACCATTTCAATCTTGTTGGTGTCACTGTCCCAGCTaGAGAGCCAGAGAAGAACAGGTTCATATTTTCTTTGCTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRLRPFQSCWCHCPS*RAREEQVHIFFAGF Trigger: AAAGCCAGCAAAGAAAATATGAACCTGTTCTTCTCTGGCTCTCCAGCTGGGACAGTGACACCAACAAGATTGAAATGGTCTGAGGCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCTGCAGGTCCAAGCTTCACTGAGAAGAGAAATAACACTTGTCCCACTGATATCAGTCCCGTTATaGAGAGCATCCCTCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQLQVQASLRREITLVPLISVPL*RASLKS Trigger: GCTTTTGAGGGATGCTCTCAATAACGGGACTGATAT...CAGTGGGACAAGTGTTATTTCTCTTCTCAGTGAAGCTTGGACCTGCAGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGAACTGTCTGAGAAGTaGTTTCTTCTTCGCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLEVSVGSGYELAFTSQNELSEK*FLLRGV Trigger: GACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTC...ATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | AGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAATTCTCTCCCTGGTGTTaGAGTCAGAGACTGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: RYQSGQGMSWLSQVKMQQFSPWC*SQRLLM Trigger: CATAAGCAGTCTCTGACTCAAACACCAGGGAGAGAA...TTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATACCATTTCAATCTTGTaGGTGTCACTGTCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLEVSVGSGYELAFTSQNTISIL*VSLSQL Trigger: CAGCTGGGACAGTGACACCAACAAGATTGAAATGGT...ATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS TCA 90 bp | TTGAGTGAAACTCTCCTGAATCCAAGTCAATATCAGTCCCGTTATTaGGAGCATCCCTCAAAAGCTGCTGTCGAACACTGTTGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSETLLNPSQYQSRY*EHPSKAAVEHCCLV Trigger: TACCAGGCAACAGTGTTCGACAGCAGCTTTTGAGGGATGCTCTCAATAACGGGACTGATATTGACTTGGATTCAGGAGAGTTTCACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS-3UTR CAA 90 bp | AGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATGCAGCAAATATCAGTCCCGTTATaGAGAGCATCCCTCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RYQSGQGMSWLSQVKMQQISVPL*RASLKS Trigger: GCTTTTGAGGGATGCTCTCAATAACGGGACTGATAT...TTGCTGCATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CCA 90 bp | CCCTGTTCTGTCTCTGACATCTTGCCAGCTTTGACATTTGAGTTCTaGAGCCCAAATAGTATAATCTGGCACATTCGCGAATATAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCSVSDILPALTFEF*SPNSIIWHIREYKQ Trigger: CTGCTTATATTCGCGAATGTGCCAGATTATACTATTTGGGCTCCAGAACTCAAATGTCAAAGCTGGCAAGATGTCAGAGACAGAACAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGAGGTATCAGTCGGGTCAGGGTATGAGTTGGCTTTCACAAGTCAAAATTCCACTCGCAAGTTTTaGTGCAGATATTCAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLEVSVGSGYELAFTSQNSTRKF*CRYSIS Trigger: GCTGATTGAATATCTGCACAAAAACTTGCGAGTGGA...ATTTTGACTTGTGAAAGCCAACTCATACCCTGACCCGACTGATACCTCTAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGATTTGCAGTGACATTTTaGGGCCACAGGACATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RREITLVPLKRNFTVEDRFAVTF*GHRTWG Trigger: ACCCCATGTCCTGTGGCCCAAAAATGTCACTGCAAA...TCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCGTTTCCAAGAAGATACCACAGGTTACAAAGCCACATGTTACAAGACTCATTCTCTCCCTGGTGTTaGAGTCAGAGACTGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SAFPRRYHRLQSHMLQDSFSPWC*SQRLLM Trigger: CATAAGCAGTCTCTGACTCAAACACCAGGGAGAGAA...TGAGTCTTGTAACATGTGGCTTTGTAACCTGTGGTATCTTCTTGGAAACGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS TCA 90 bp | AACTCTCCTAGAAACATCTTCAGCAGCGTGGCCACATCATTTGAGTaGAACTCTCCTGAATCCAAGTCAATATCAGTCCCGTTATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NSPRNIFSSVATSFE*NSPESKSISVPLLR Trigger: TCTCAATAACGGGACTGATATTGACTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGCTGCTGAAGATGTTTCTAGGAGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACTTGCAAATGACAAAATaGCAGATGGCATCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRREITLVPLKRNFTVEDLQMTK*QMASLR Trigger: CCGGAGTGATGCCATCTGCAATTTTGTCATTTGCAA...GTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGAGCGTGGCCACATCATTaGAGTGAAACTCTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RREITLVPLKRNFTVEDRAWPHH*SETLLN Trigger: ATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGC...TCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
||
| CDS-3UTR CAA 90 bp | ACATTAAAAACAAACACGGAGCACAGCACTTCCACAGACGCACAGCTTCAGAGAAGGTTCATATTTTCTTaGCTGGCTTTCTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKTNTEHSTSTDAQLQRRFIFS*LAFFSS Trigger: GGAACTGAAGAAAGCCAGCAAAGAAAATATGAACCT...TCTCTGAAGCTGTGCGTCTGTGGAAGTGCTGTGCTCCGTGTTTGTTTTTAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| CDS TCA 90 bp | AGGTTATGGGCAGACATCTTATTCTTGTCTTGCTTCTTCGCTGTCTaGTACAGGAGATCAAGCAGTAACTTTAGCAAGTTACGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLWADILFLSCFFAV*YRRSSSNFSKLRLA Trigger: AGCCAATCGTAACTTGCTAAAGTTACTGCTTGATCTCCTGTATCAGACAGCGAAGAAGCAAGACAAGAATAAGATGTCTGCCCATAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS GCA 90 bp | GCAAGTTTTTGTGCAGATATTCAATCAGCTGATAAATCTGGGCAATaGCTTCCTCCGTCAACGGAGATCCAAATACCACTCCTTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASFCADIQSADKSGQ*LPPSTEIQIPLLFL Trigger: AAGAAAAAGGAGTGGTATTTGGATCTCCGTTGACGGAGGAAGGCATTGCCCAGATTTATCAGCTGATTGAATATCTGCACAAAAACTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CCA 90 bp | GACATGAGGTTGTCAGATCAAGGTCATCCTTTGACATTTGAGTTCTaGAGCCCAAATAGTATAATCTGGCACATTCGCGAATATAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DMRLSDQGHPLTFEF*SPNSIIWHIREYKQ Trigger: CTGCTTATATTCGCGAATGTGCCAGATTATACTATTTGGGCTCCAGAACTCAAATGTCAAAGGATGACCTTGATCTGACAACCTCATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAGAGAAATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGAGATCAAGGTCATCCTTaGACATTTGAGTTCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TEKRNNTCPTEEKLHCRGDQGHP*TFEFWS Trigger: GCTCCAGAACTCAAATGTCAAAGGATGACCTTGATC...TCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTATTTCTCTTCTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026150.15 |
||
| CDS-3UTR CAA 90 bp | ATAACACTTGTCCCACTGAAGAGAAACTTCACTGTAGAGGACAGAAGTAATAAATGCTGTCGAACACTGTaGCCTGGTACTCTAAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ITLVPLKRNFTVEDRSNKCCRTL*PGTLNK Trigger: CTTGTTTAGAGTACCAGGCAACAGTGTTCGACAGCA...TTTATTACTTCTGTCCTCTACAGTGAAGTTTCTCTTCAGTGGGACAAGTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
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| CDS TCA 72 bp | CAGGACTTTGCGCTTGATAAGCCCACTGAAGGAGCGTaGGCGGGCTCTCTTCTGGACCCTGGGAGTAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QDFALDKPTEGA*AGSLLDPGSRR Trigger: CCTTCTACTCCCAGGGTCCAGAAGAGAGCCCGCTCACGCTCCTTCAGTGGGCTTATCAAGCGCAAAGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CCA 72 bp | ATAAGCCCACTGAAGGAGCGTGAGCGGGCTCTCTTCTaGACCCTGGGAGTAGAAGGTTCTCTCCCTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ISPLKERERALF*TLGVEGSLPGV Trigger: AACACCAGGGAGAGAACCTTCTACTCCCAGGGTCCAGAAGAGAGCCCGCTCACGCTCCTTCAGTGGGCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS TCA 72 bp | CCTCCAGGCAGCTTAAGGTCCACTTCACCCATCAGCTaGGCCAACTCAGTTCCCGGCAAATCAATAAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPGSLRSTSPIS*ANSVPGKSISL Trigger: AAGGCTTATTGATTTGCCGGGAACTGAGTTGGCTCAGCTGATGGGTGAAGTGGACCTTAAGCTGCCTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | TCCCCTCTCTCTTCGCCTCAGACCATTTCAATCTTGTaGGTGTCACTGTCCCAGCTGGAGAGCCAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPLSSPQTISIL*VSLSQLESQRR Trigger: TCTTCTCTGGCTCTCCAGCTGGGACAGTGACACCAACAAGATTGAAATGGTCTGAGGCGAAGAGAGAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | TTCTCCCCTCTCTCTTCGCCTCAGACCATTTCAATCTaGTTGGTGTCACTGTCCCAGCTGGAGAGCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSPLSSPQTISI*LVSLSQLESQR Trigger: TCTCTGGCTCTCCAGCTGGGACAGTGACACCAACAAGATTGAAATGGTCTGAGGCGAAGAGAGAGGGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | TTGAGAGCATCCCTCAAAAGCTGCTGTCGAACACTGTaGCCTGGTACTCTAAACAAGCCCTCCACTCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRASLKSCCRTL*PGTLNKPSTRK Trigger: CTTGCGAGTGGAGGGCTTGTTTAGAGTACCAGGCAACAGTGTTCGACAGCAGCTTTTGAGGGATGCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | CTGGACCCTGGGAGTAGAAGGTTCTCTCCCTGGTGTTaGAGTCAGAGACTGCTTATGGAACTGTCTGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LDPGSRRFSPWC*SQRLLMELSEK Trigger: CTTCTCAGACAGTTCCATAAGCAGTCTCTGACTCAAACACCAGGGAGAGAACCTTCTACTCCCAGGGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 90 bp | ATCCTTTTCTCCCCTCTCTCTTCGCCTCAGACCATTTCAATCTTGTaGGTGTCACTGTCCCAGCTGGAGAGCCAGAGAAGAACAGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ILFSPLSSPQTISIL*VSLSQLESQRRTGS Trigger: TGAACCTGTTCTTCTCTGGCTCTCCAGCTGGGACAGTGACACCAACAAGATTGAAATGGTCTGAGGCGAAGAGAGAGGGGAGAAAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
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| CDS CAA 90 bp | AGAATCCTTTTCTCCCCTCTCTCTTCGCCTCAGACCATTTCAATCTaGTTGGTGTCACTGTCCCAGCTGGAGAGCCAGAGAAGAACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RILFSPLSSPQTISI*LVSLSQLESQRRTG Trigger: ACCTGTTCTTCTCTGGCTCTCCAGCTGGGACAGTGACACCAACAAGATTGAAATGGTCTGAGGCGAAGAGAGAGGGGAGAAAAGGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000177495.2 |
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| CDS CCA 72 bp | TCTCTTCTGGACCCTGGGAGTAGAAGGTTCTCTCCCTaGTGTTTGAGTCAGAGACTGCTTATGGAACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLDPGSRRFSP*CLSQRLLMELS Trigger: AGACAGTTCCATAAGCAGTCTCTGACTCAAACACCAGGGAGAGAACCTTCTACTCCCAGGGTCCAGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 90 bp | CCTCCTGCTGAGAGGAAGGATCTACCCTGTTCTGTCTCTGACATCTaGCCAGCTGGAAGGACATGTTATGACATGAGGTTGTCAGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPAERKDLPCSVSDI*PAGRTCYDMRLSDQ Trigger: TTGATCTGACAACCTCATGTCATAACATGTCCTTCCAGCTGGCAAGATGTCAGAGACAGAACAGGGTAGATCCTTCCTCTCAGCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| CDS TCA 72 bp | AGAAGTTGTTTCTTCTTCGCGGAGTCTGGCCAGTTATaGACATGCTGGAAGAGTTCTCTCAGCGCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSCFFFAESGQL*TCWKSSLSASS Trigger: AGAAGAGGCGCTGAGAGAACTCTTCCAGCATGTTCATAACTGGCCAGACTCCGCGAAGAAGAAACAACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS TCA 72 bp | CTGGTGTTTGAGTCAGAGACTGCTTATGGAACTGTCTaGGAAGTTGTTTCTTCTTCGCGGAGTCTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LVFESETAYGTV*EVVSSSRSLAS Trigger: ACTGGCCAGACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTCCATAAGCAGTCTCTGACTCAAACACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CCA 72 bp | GCTCGGGTAACTCTCCTAGAAACATCTTCAGCAGCGTaGCCACATCATTTGAGTGAAACTCTCCTGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARVTLLETSSAA*PHHLSETLLNP Trigger: TGGATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGCTGCTGAAGATGTTTCTAGGAGAGTTACCCGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CCA 72 bp | GAGCAGCTGCAGGGCCTCAATCTGCCGCTCCTTGTCTaGTATGTTGGTCTTATTTCCTTTATCATCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: EQLQGLNLPLLV*YVGLISFIIKL Trigger: CAGTTTGATGATAAAGGAAATAAGACCAACATACCAGACAAGGAGCGGCAGATTGAGGCCCTGCAGCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | AGGAAGAGCAGCTGCAGGGCCTCAATCTGCCGCTCCTaGTCTGGTATGTTGGTCTTATTTCCTTTATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: RKSSCRASICRS*SGMLVLFPLSS Trigger: TGATGATAAAGGAAATAAGACCAACATACCAGACAAGGAGCGGCAGATTGAGGCCCTGCAGCTGCTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | GAGAGGAAGGATCTACCCTGTTCTGTCTCTGACATCTaGCCAGCTGGAAGGACATGTTATGACATGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ERKDLPCSVSDI*PAGRTCYDMRL Trigger: CAACCTCATGTCATAACATGTCCTTCCAGCTGGCAAGATGTCAGAGACAGAACAGGGTAGATCCTTCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| CDS CAA 90 bp | CCCTGGTGTTTGAGTCAGAGACTGCTTATGGAACTGTCTGAGAAGTaGTTTCTTCTTCGCGGAGTCTGGCCAGTTATGAACATGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PWCLSQRLLMELSEK*FLLRGVWPVMNMLE Trigger: TTCCAGCATGTTCATAACTGGCCAGACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTCCATAAGCAGTCTCTGACTCAAACACCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 90 bp | CCTCCTGCTGAGAGGAAGGATCTACCCTGTTCTGTCTCTGACATCTaGCCAGCTTTGACATTTGAGTTCTGGAGCCCAAATAGTATAATC | + |
|
Preference number: 6 (lower is better) Translates to: PPAERKDLPCSVSDI*PALTFEFWSPNSII Trigger: GATTATACTATTTGGGCTCCAGAACTCAAATGTCAAAGCTGGCAAGATGTCAGAGACAGAACAGGGTAGATCCTTCCTCTCAGCAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177495.2 |
||
| CDS CAA 72 bp | AACTCAGTTCCCGGCAAATCAATAAGCCTTGTGATGTaGCTGACCACCAATTCGGTGAACACCTCTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSVPGKSISLVM*LTTNSVNTSGF Trigger: GAAACCAGAGGTGTTCACCGAATTGGTGGTCAGCAACATCACAAGGCTTATTGATTTGCCGGGAACTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 90 bp | CGGGTAACTCTCCTAGAAACATCTTCAGCAGCGTGGCCACATCATTaGAGTGAAACTCTCCTGAATCCAAGTCAATATCAGTCCCGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: RVTLLETSSAAWPHH*SETLLNPSQYQSRY Trigger: ATAACGGGACTGATATTGACTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGCTGCTGAAGATGTTTCTAGGAGAGTTACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS TCA 72 bp | ACTCTCCTGAATCCAAGTCAATATCAGTCCCGTTATTaGGAGCATCCCTCAAAAGCTGCTGTCGAACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: TLLNPSQYQSRY*EHPSKAAVEHC Trigger: ACAGTGTTCGACAGCAGCTTTTGAGGGATGCTCTCAATAACGGGACTGATATTGACTTGGATTCAGGAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS TCA 72 bp | AGAAACATCTTCAGCAGCGTGGCCACATCATTTGAGTaGAACTCTCCTGAATCCAAGTCAATATCAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RNIFSSVATSFE*NSPESKSISVP Trigger: CGGGACTGATATTGACTTGGATTCAGGAGAGTTTCACTCAAATGATGTGGCCACGCTGCTGAAGATGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS GCA 72 bp | TGTGCAGATATTCAATCAGCTGATAAATCTGGGCAATaGCTTCCTCCGTCAACGGAGATCCAAATACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: CADIQSADKSGQ*LPPSTEIQIPL Trigger: GAGTGGTATTTGGATCTCCGTTGACGGAGGAAGGCATTGCCCAGATTTATCAGCTGATTGAATATCTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS GCA 72 bp | ATATCAGTCCCGTTATTGAGAGCATCCCTCAAAAGCTaGTGTCGAACACTGTTGCCTGGTACTCTAAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISVPLLRASLKS*CRTLLPGTLNK Trigger: CTTGTTTAGAGTACCAGGCAACAGTGTTCGACAGCAGCTTTTGAGGGATGCTCTCAATAACGGGACTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS CAA 72 bp | AACTCTCCTGAATCCAAGTCAATATCAGTCCCGTTATaGAGAGCATCCCTCAAAAGCTGCTGTCGAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: NSPESKSISVPL*RASLKSCCRTL Trigger: CAGTGTTCGACAGCAGCTTTTGAGGGATGCTCTCAATAACGGGACTGATATTGACTTGGATTCAGGAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS CAA 72 bp | TTGAGTCAGAGACTGCTTATGGAACTGTCTGAGAAGTaGTTTCTTCTTCGCGGAGTCTGGCCAGTTATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSQRLLMELSEK*FLLRGVWPVMN Trigger: GTTCATAACTGGCCAGACTCCGCGAAGAAGAAACAACTTCTCAGACAGTTCCATAAGCAGTCTCTGACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
||
| CDS TCA 72 bp | TCAAACTGCATCAGATCAGCAATTTTGAGGTGTACATaGAAATGTTTATGGGTCAGCAGGGGCTCGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SNCIRSAILRCT*KCLWVSRGSGN Trigger: GTTACCCGAGCCCCTGCTGACCCATAAACATTTTCATGTACACCTCAAAATTGCTGATCTGATGCAGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | AAGAGCAAGGTTATGGGCAGACATCTTATTCTTGTCTaGCTTCTTCGCTGTCTGATACAGGAGATCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KSKVMGRHLILV*LLRCLIQEIKQ Trigger: CTGCTTGATCTCCTGTATCAGACAGCGAAGAAGCAAGACAAGAATAAGATGTCTGCCCATAACCTTGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS CAA 72 bp | ATCTTGCCAGCTGGAAGGACATGTTATGACATGAGGTaGTCAGATCAAGGTCATCCTTTGACATTTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ILPAGRTCYDMR*SDQGHPLTFEF Trigger: GAACTCAAATGTCAAAGGATGACCTTGATCTGACAACCTCATGTCATAACATGTCCTTCCAGCTGGCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| CDS CCA 72 bp | TTGTCAGATCAAGGTCATCCTTTGACATTTGAGTTCTaGAGCCCAAATAGTATAATCTGGCACATTCGCGAA | + |
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Preference number: 6 (lower is better) Translates to: LSDQGHPLTFEF*SPNSIIWHIRE Trigger: TTCGCGAATGTGCCAGATTATACTATTTGGGCTCCAGAACTCAAATGTCAAAGGATGACCTTGATCTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 |
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| CDS TCA 72 bp | GCAGACATCTTATTCTTGTCTTGCTTCTTCGCTGTCTaGTACAGGAGATCAAGCAGTAACTTTAGCAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: ADILFLSCFFAV*YRRSSSNFSKL Trigger: TAACTTGCTAAAGTTACTGCTTGATCTCCTGTATCAGACAGCGAAGAAGCAAGACAAGAATAAGATGTCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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| CDS TCA 72 bp | TTCCTTTATCATCAAACTGCATCAGATCAGCAATTTTaGGGTGTACATGAAAATGTTTATGGGTCAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: FLYHQTASDQQF*GVHENVYGSAG Trigger: CCCTGCTGACCCATAAACATTTTCATGTACACCTCAAAATTGCTGATCTGATGCAGTTTGATGATAAAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026150.15 ENSMUST00000163265.9 ENSMUST00000177495.2 |
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