Pregenerated sensors for ARHGAP18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039031Ensembl transcript IDs: ENSMUST00000039557.9, ENSMUST00000135866.2, ENSMUST00000176060.8
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATaGACAGCACTTTCTTTCCTAGAGCGGCATCAAGAGCTTCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: TGCSRHCMLNTSLFS*TALSFLERHQELLR Trigger: CCTCAGAAGCTCTTGATGCCGCTCTAGGAAAGAAAGTGCTGTTCATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR CCA 90 bp | CTTTCTTTCCTAGAGCGGCATCAAGAGCTTCTGAGGACGTGTGTTTaGCTTCCCCTAAAGAACTATGAACAGTGTCATCATATGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LSFLERHQELLRTCV*LPLKNYEQCHHMPV Trigger: CACTGGCATATGATGACACTGTTCATAGTTCTTTAGGGGAAGCCAAACACACGTCCTCAGAAGCTCTTGATGCCGCTCTAGGAAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR TCA 90 bp | TTTAATGCTTTGGTGATAATTAGAAGGTCCTGGCAGTCTGGGTCTTaGCGATGGGTACAGCTTTGTGCACATAAGTCCAATAAGCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: FNALVIIRRSWQSGS*RWVQLCAHKSNKLK Trigger: TTTGAGCTTATTGGACTTATGTGCACAAAGCTGTACCCATCGTCAAGACCCAGACTGCCAGGACCTTCTAATTATCACCAAAGCATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR TCA 90 bp | GCTCATCCACACATGCCATCTTTCGTCAGTGACACTCTACCCTTATaGAATAGTGAACATTGCTCTTATTTCATTTCTCTTATTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: AHPHMPSFVSDTLPL*NSEHCSYFISLIYS Trigger: GCTGTAAATAAGAGAAATGAAATAAGAGCAATGTTCACTATTTCATAAGGGTAGAGTGTCACTGACGAAAGATGGCATGTGTGGATGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR CCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGGTCATCATATGCCAGTaGCTCATCCACACATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GITTAPIPSATKAPIHRLVIICQ*LIHTCH Trigger: ATGGCATGTGTGGATGAGCCACTGGCATATGATGAC...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATAACAGTGTCATCATATaGCAGTGGCTCATCCACACA | + |
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Preference number: 2 (lower is better) Translates to: THPQAALVIVCSTLPCSHNSVII*QWLIHT Trigger: TGTGTGGATGAGCCACTGGCATATGATGACACTGTT...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR CAA 90 bp | ATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGCTCTCGTCATaGTATGCTCAACACTTCCCTGTTCTCATGAACAGCACTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: IPSATKAPIHRLLSS*YAQHFPVLMNSTFF Trigger: AAAGAAAGTGCTGTTCATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCAGCATTTGCCCACTATaGGCAAAGTTCTTGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: TKSNGTNESPWHNHSTHSSICPL*AKFLFN Trigger: ATTGAACAAGAACTTTGCTCATAGTGGGCAAATGCT...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTTCTGTCACAGTGTGGTCTGTGCACAAAAAGCCCTGGGGATAATACTTTGCCGTTGTTTAGACAGATaGTTCAAAGCCATGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: VFCHSVVCAQKALGIILCRCLDR*FKAMST Trigger: AGTACTCATGGCTTTGAATCATCTGTCTAAACAACG...GCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR CCA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCTGAGGACGTGTGTTTaGCTTCCCCTAAAGAACTAT | + |
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Preference number: 2 (lower is better) Translates to: LNTKSNGTNESPWHNHSTLRTCV*LPLKNY Trigger: ATAGTTCTTTAGGGGAAGCCAAACACACGTCCTCAG...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCATGATTGTCATACCCTaGAGACTTACTCTGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LNTKSNGTNESPWHNHSTMIVIP*RLTLKG Trigger: TCCTTTCAGAGTAAGTCTTCAGGGTATGACAATCAT...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCGCTTGTTCACATAAATaGTTGTCATACCCTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LNTKSNGTNESPWHNHSTACSHK*LSYPED Trigger: GTCTTCAGGGTATGACAATCATTTATGTGAACAAGC...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCGATGATTCAAAGCCATaGGTACTAACATTTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: LNTKSNGTNESPWHNHSTDDSKP*VLTFCG Trigger: ACCACAAAATGTTAGTACTCATGGCTTTGAATCATC...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR CAA 90 bp | AGAGTATTTAATCTGCTGGGGATATTACTAGGTGTCTTAAAGCATTaGCCCACTATGAGCAAAGTTCTTGTTCAATACTTAGTACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RVFNLLGILLGVLKH*PTMSKVLVQYLVPK Trigger: TTTTGGTACTAAGTATTGAACAAGAACTTTGCTCATAGTGGGCAAATGCTTTAAGACACCTAGTAATATCCCCAGCAGATTAAATACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR GCA 72 bp | ACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTGTaGACAAAAAGCCCTGGGGATAATACTTTGCACAGC | + |
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Preference number: 3 (lower is better) Translates to: TAEVCVLSQCGL*TKSPGDNTLHS Trigger: GCTGTGCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACACAGACCTCTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR GCA 72 bp | CAAAGCACCCATCCACAGGCTGCTCTCGTCATTGTATaGTCAACACTTCCCTGTTCTCATGAACAGCACTTT | + |
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Preference number: 3 (lower is better) Translates to: QSTHPQAALVIV*STLPCSHEQHF Trigger: AAAGTGCTGTTCATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR CCA 72 bp | CTAGAGCGGCATCAAGAGCTTCTGAGGACGTGTGTTTaGCTTCCCCTAAAGAACTATGAACAGTGTCATCAT | + |
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Preference number: 3 (lower is better) Translates to: LERHQELLRTCV*LPLKNYEQCHH Trigger: ATGATGACACTGTTCATAGTTCTTTAGGGGAAGCCAAACACACGTCCTCAGAAGCTCTTGATGCCGCTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR TCA 72 bp | TTGGTGATAATTAGAAGGTCCTGGCAGTCTGGGTCTTaGCGATGGGTACAGCTTTGTGCACATAAGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: LVIIRRSWQSGS*RWVQLCAHKSN Trigger: ATTGGACTTATGTGCACAAAGCTGTACCCATCGTCAAGACCCAGACTGCCAGGACCTTCTAATTATCACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR TCA 72 bp | TCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATaGACAGCACTTTCTTTCCTAGAGCGGCATCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SRHCMLNTSLFS*TALSFLERHQE Trigger: CTCTTGATGCCGCTCTAGGAAAGAAAGTGCTGTTCATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR CAA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCGGTGTCTTAAAGCATTaGCCCACTATGAGCAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LNTKSNGTNESPWHNHSTGVLKH*PTMSKV Trigger: AACTTTGCTCATAGTGGGCAAATGCTTTAAGACACC...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR-3UTR CAA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCCTGGGGATAATACTTaGCACAGCATCTTAACAAAC | + |
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Preference number: 3 (lower is better) Translates to: LNTKSNGTNESPWHNHSTPGDNT*HSILTN Trigger: GTTTGTTAAGATGCTGTGCAAAGTATTATCCCCAGG...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCCTGTCCCCAGCGACCTaGTCCTTGCCGCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TKSNGTNESPWHNHSTHSLSPAT*SLPLGW Trigger: CCACCCCAGCGGCAAGGACCAGGTCGCTGGGGACAG...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGTTTCTGAACAGCTGCTaGCTGAGTCCGGGTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLFLNSC*LSPGQC Trigger: ACACTGACCCGGACTCAGGCAGCAGCTGTTCAGAAA...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGAGGCTGGCCGCATCGTaGTGTTTGACACTTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLRLAAS*CLTLSQ Trigger: TTGGGAAAGTGTCAAACAGCACGATGCGGCCAGCCT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGAAACTTCTCCTTTCTTaGGTGTCTGGGCAACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLKLLLS*VSGQPH Trigger: GTGGGGTTGCCCAGACACTCAAGAAAGGAGAAGTTT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGTGTATTGGCCATATCTaGGACTGGAGGTGGCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLCIGHI*DWRWLR Trigger: ACGAAGCCACCTCCAGTCGCAGATATGGCCAATACA...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTAAGAGTCGTTGCTGCTaGTCTTCTGCGTCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSKSRCC*SSASSP Trigger: AGGAGAGGACGCAGAAGATCAGCAGCAACGACTCTT...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGGACAGCCCCACTAGATaGCTGATCATCTTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLDSPTR*LIIFSL Trigger: CAAGGAAAAGATGATCAGCCATCTAGTGGGGCTGTC...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATGCCCCACTAGATGGCTaGTCATCTTTTCCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: THPQAALVIVCSTLPCSHAPLDG*SSFPWP Trigger: AGGCCAAGGAAAAGATGATCAGCCATCTAGTGGGGC...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGAGGAGGTTCAAAGCCTaGAACTGTTCCTTTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLRRFKA*NCSFLV Trigger: AACCAGAAAGGAACAGTTGCAGGCTTTGAACCTCCT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATTTCTTCCTCAAGGTCTaGGAGACCGTTTCCACCCGT | + |
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Preference number: 4 (lower is better) Translates to: THPQAALVIVCSTLPCSHFFLKV*ETVSTR Trigger: ACGGGTGGAAACGGTCTCCCAGACCTTGAGGAAGAA...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGAGATTCTGGACAGCTTaGAAGGCTTTGAGATACTCC | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLRFWTA*KALRYS Trigger: GGAGTATCTCAAAGCCTTCCAAGCTGTCCAGAATCT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR CAA 72 bp | GCTACCAAAGCACCCATCCACAGGCTGCTCTCGTCATaGTATGCTCAACACTTCCCTGTTCTCATGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: ATKAPIHRLLSS*YAQHFPVLMNS Trigger: GCTGTTCATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCTTTGGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGTCATCCAAGGAATCCTaGGAACTCGATCGATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: GITTAPIPSATKAPIHRLSSKES*ELDRSN Trigger: ATTTGATCGATCGAGTTCTCAGGATTCCTTGGATGA...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCTTGGCAAAGATTCTTaGTTCTCATGGCTGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSLGKDS*FSWLLL Trigger: CAGGAGCAGCCATGAGAATCAAGAATCTTTGCCAAG...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | GAAACCTGCTACTTTTATTTACACTCTCGACCCAGCAAGAATGATGACACGTCCCCTGGTCCTTGCCGCTaGGGTGGTAAGCAGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: ETCYFYLHSRPSKNDDTSPGPCR*GGKQLA Trigger: TGCTAACTGCTTACCACCCCAGCGGCAAGGACCAGG...GGACGTGTCATCATTCTTGCTGGGTCGAGAGTGTAAATAAAAGTAGCAGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCTGGTTGGAAGATTCTaGACAGCTTGGAAGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSLVGRF*TAWKAL Trigger: CAAAGCCTTCCAAGCTGTCCAGAATCTTCCAACCAG...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATTTGCTGCTGATCTTCTaGGTCCTCTCCTTACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: THPQAALVIVCSTLPCSHLLLIF*VLSLLN Trigger: GTTCAGTAAGGAGAGGACGCAGAAGATCAGCAGCAA...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATCTTCATGTCTTGGGGTaGCAAGTCTCCAATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: THPQAALVIVCSTLPCSHLHVLG*QVSNPC Trigger: ACAAGGATTGGAGACTTGGCACCCCAAGACATGAAG...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GTGTTCTGTCACAGTGTGGTCTGTGCACAAAAAGCCCTGGGGATAATACTTTGCTGGGGCCATGACCATTaGTACATTCCCAGCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VFCHSVVCAQKALGIILCWGHDH*YIPSCH Trigger: ATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCA...GCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTTGGTTTATGGTGTATTaGCCATATCTGCGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSWFMVY*PYLRLE Trigger: CTCCAGTCGCAGATATGGCCAATACACCATAAACCA...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCTTCAAGCCCAGCGTGTaGCACATGAAGAGATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TKSNGTNESPWHNHSTHSFKPSV*HMKRFG Trigger: CCCAAATCTCTTCATGTGCCACACGCTGGGCTTGAA...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCATTCTCGCTGTTCACTaGACTTCAAGCCCAGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: TKSNGTNESPWHNHSTHSILAVH*TSSPAC Trigger: ACACGCTGGGCTTGAAGTCCAGTGAACAGCGAGAAT...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCTGCCATGGAAACTTTTaGAAGATGGGGAGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TKSNGTNESPWHNHSTHSCHGNF*KMGSLH Trigger: GTGCAAGCTCCCCATCTTTCAAAAGTTTCCATGGCA...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTACAGCGACCTGGTCCTTaGCGCTGGGGTGGTAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLQRPGP*RWGGKQ Trigger: CTGCTTACCACCCCAGCGGCAAGGACCAGGTCGCTG...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCTGACGTCACGAATGTaGTGCTGTTTGTTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSLTSRM*CCLFFF Trigger: GAAGAAAAACAAACAGCACCACATTCGTGACGTCAG...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATAGCCTTCTTGGTTTATaGTGTATTGGCCATATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: THPQAALVIVCSTLPCSHSLLGL*CIGHIC Trigger: GCAGATATGGCCAATACACCATAAACCAAGAAGGCT...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | GTGTTCTGTCACAGTGTGGTCTGTGCACAAAAAGCCCTGGGGATAATACTTTGCGCAACTGTTCCTTTCTaGTTGGAAGATTCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFCHSVVCAQKALGIILCATVPF*LEDSGQ Trigger: CTGTCCAGAATCTTCCAACCAGAAAGGAACAGTTGC...GCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCATAGACCTGCTTCTTTaGGCCATTCTTCTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKSNGTNESPWHNHSTHSIDLLL*AILLPV Trigger: AACTGGAAGAAGAATGGCTCAAAGAAGCAGGTCTAT...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATCAGAGTCTCTGGTTTTaGTTTTCACAGCTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: THPQAALVIVCSTLPCSHQSLWF*FSQLSV Trigger: AACAGAAAGCTGTGAAAATCAAAACCAGAGACTCTG...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCGAGAAATCAGTTTTTaGAAGATCAAGGGTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSREISF*KIKGIR Trigger: ACGAATACCCTTGATCTTTCAAAAACTGATTTCTCG...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCATGCTCAGCAGTGGCTaGGGCAATTCTCTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTKSNGTNESPWHNHSTMLSSG*GNSLRK Trigger: CTTTCTGAGAGAATTGCCCCAGCCACTGCTGAGCAT...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CCA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTTTAGCTGTATTGCCATaGAAACTTTTGAAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: STHPQAALVIVCSTLPCSLAVLP*KLLKDG Trigger: CCCATCTTTCAAAAGTTTCCATGGCAATACAGCTAA...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCTGGCAAGCACATCGCTaGCTTTTAGTTCTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TKSNGTNESPWHNHSTHSWQAHR*LLVLQL Trigger: TAACTGAAGAACTAAAAGCCAGCGATGTGCTTGCCA...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTGTCACAGTGTGGTCTGTGCACAAAAAGCCCTGGGGATAATACTTTGCTTTCATTCGACCTCTTaGTGTTTTCTAGTTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFCHSVVCAQKALGIILCFHSTS*CFLVLS Trigger: GGACAGAACTAGAAAACATCAAGAGGTCGAATGAAA...GCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCACTCGATCGATCAAATaGAGGCCTCTCGGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNTKSNGTNESPWHNHSTTRSIK*RPLGNF Trigger: AAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGT...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTACTCCATGCTCAGCAGTaGCTGGGGCAATTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLLHAQQ*LGQFSQ Trigger: CTGAGAGAATTGCCCCAGCCACTGCTGAGCATGGAG...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTCAGCTTGGAAGGCTTTaGGATACTCCATGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YFISLIYSRGLCSVTVWSQLGRL*DTPCSA Trigger: TGCTGAGCATGGAGTATCTCAAAGCCTTCCAAGCTG...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTAGAGATTTGGGGCCATaGCCATTGCTACATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YFISLIYSRGLCSVTVWSRDLGP*PLLHSQ Trigger: CTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCT...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR GCA 90 bp | GAAACCTGCTACTTTTATTTACACTCTCGACCCAGCAAGAATGATGACACGTCCAACAGAATGCTTTCCTaGGGGTCATCAATAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETCYFYLHSRPSKNDDTSNRMLS*GSSIDS Trigger: AGAGTCTATTGATGACCCGCAGGAAAGCATTCTGTT...GGACGTGTCATCATTCTTGCTGGGTCGAGAGTGTAAATAAAAGTAGCAGGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR GCA 90 bp | GAAACCTGCTACTTTTATTTACACTCTCGACCCAGCAAGAATGATGACACGTCCACGTCACGAATGTGGTaGTGTTTGTTTTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETCYFYLHSRPSKNDDTSTSRMW*CLFFFL Trigger: GAGGAAGAAAAACAAACAGCACCACATTCGTGACGT...GGACGTGTCATCATTCTTGCTGGGTCGAGAGTGTAAATAAAAGTAGCAGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTAGCAACCCCACTTTCTTaGCTGAGAAACCTGGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLATPLS*LRNLAS Trigger: GCTTGCCAGGTTTCTCAGCCAAGAAAGTGGGGTTGC...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTTGTGCCTCTCTCTGTTaGGCAAATATGTCTCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: YFISLIYSRGLCSVTVWSCASLC*ANMSLT Trigger: CGTCAGAGACATATTTGCTCAACAGAGAGAGGCACA...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTACTCGAATCACTCCCTaGGGAACATCAGCACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YFISLIYSRGLCSVTVWSTRITP*GTSAPF Trigger: AAATGGTGCTGATGTTCCTCAGGGAGTGATTCGAGT...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GTGTTCTGTCACAGTGTGGTCTGTGCACAAAAAGCCCTGGGGATAATACTTTGCAACATCAGCACCATTTaGAGTTTTATCTTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFCHSVVCAQKALGIILCNISTI*SFILLF Trigger: GAAAAGCAAGATAAAACTGCAAATGGTGCTGATGTT...GCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTACCTCATCAGGTTCTTTaGCAACTATGGCCTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLPHQVL*QLWPLD Trigger: GTCAAGAGGCCATAGTTGTCAAAGAACCTGATGAGG...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTAGAGCAAATATGTCTCTaGCGTCACGAATGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLEQICL*RHECGA Trigger: AGCACCACATTCGTGACGTCAGAGACATATTTGCTC...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR TCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTAATGACACCTCCAGATTaGTGTCTGTTTCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLMTPPD*CLFQRQ Trigger: CTGCCTCTGAAACAGACATCAATCTGGAGGTGTCAT...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTATTTGCTGTCCCAGCTaGCATTTCAAATTCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFISLIYSRGLCSVTVWSICCPS*HFKFSL Trigger: CAGCGAGAATTTGAAATGGCAGCTGGGACAGCAAAT...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR GCA 90 bp | GAAACCTGCTACTTTTATTTACACTCTCGACCCAGCAAGAATGATGACACGTCCTACCTAATCAATAAGTaGATGACATTTGCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETCYFYLHSRPSKNDDTSYLINK*MTFAVP Trigger: TGGGACAGCAAATGTCATGCACTTATTGATTAGGTA...GGACGTGTCATCATTCTTGCTGGGTCGAGAGTGTAAATAAAAGTAGCAGGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTATCTCGGGAACTTTGGTaGAGCCTTCTTGGTTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLSRELW*SLLGLW Trigger: CCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGA...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR CCA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTAGCACATGAAGAGATTTaGGGCCATGACCATTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLAHEEI*GHDHCY Trigger: GTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGC...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS-3UTR TCA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTCAGCTTTCTGTTGTTTaGATTCCAAGCCCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: YFISLIYSRGLCSVTVWSQLSVV*IPSPTH Trigger: ATGTGTTGGGCTTGGAATTCAAACAACAGAAAGCTG...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| 3UTR CAA 72 bp | AATCTGCTGGGGATATTACTAGGTGTCTTAAAGCATTaGCCCACTATGAGCAAAGTTCTTGTTCAATACTTA | + |
|
Preference number: 4 (lower is better) Translates to: NLLGILLGVLKH*PTMSKVLVQYL Trigger: TAAGTATTGAACAAGAACTTTGCTCATAGTGGGCAAATGCTTTAAGACACCTAGTAATATCCCCAGCAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS GCA 90 bp | CTTCGTCGCCTCCCTTTACATGGCTGTCCCCAGCGACCTGGTCCTTaGCGCTGGGGTGGTAAGCAGTTAGCACAACTCCCGAGGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRRLPLHGCPQRPGP*RWGGKQLAQLPRNS Trigger: CGAGTTCCTCGGGAGTTGTGCTAACTGCTTACCACCCCAGCGGCAAGGACCAGGTCGCTGGGGACAGCCATGTAAAGGGAGGCGACGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CCA 90 bp | CGCCTCCCTTTACATGGCTGTCCCCAGCGACCTGGTCCTTGCCGCTaGGGTGGTAAGCAGTTAGCACAACTCCCGAGGAACTCGATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPLHGCPQRPGPCR*GGKQLAQLPRNSIA Trigger: GGCTATCGAGTTCCTCGGGAGTTGTGCTAACTGCTTACCACCCCAGCGGCAAGGACCAGGTCGCTGGGGACAGCCATGTAAAGGGAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CCA 90 bp | AGCCTTCTTGGTTTATGGTGTATTGGCCATATCTGCGACTGGAGGTaGCTTCGTCGCCTCCCTTTACATGGCTGTCCCCAGCGACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGLWCIGHICDWR*LRRLPLHGCPQRPG Trigger: ACCAGGTCGCTGGGGACAGCCATGTAAAGGGAGGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS TCA 90 bp | CAGATTGATGTCTGTTTCAGAGGCAGGTGTGTCCTCAGGCACCCGTaGGATCTGCTCCTTGCTATCGACAGCCCCACTAGATGGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: QIDVCFRGRCVLRHP*DLLLAIDSPTRWLI Trigger: GATCAGCCATCTAGTGGGGCTGTCGATAGCAAGGAGCAGATCTCACGGGTGCCTGAGGACACACCTGCCTCTGAAACAGACATCAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
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| CDS CCA 90 bp | GGCCTCTCGGGAACTTTGGTGGAGCCTTCTTGGTTTATGGTGTATTaGCCATATCTGCGACTGGAGGTGGCTTCGTCGCCTCCCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: GLSGTLVEPSWFMVY*PYLRLEVASSPPFT Trigger: TGTAAAGGGAGGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | CAAATGGAGGCCTCTCGGGAACTTTGGTGGAGCCTTCTTGGTTTATaGTGTATTGGCCATATCTGCGACTGGAGGTGGCTTCGTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QMEASRELWWSLLGL*CIGHICDWRWLRRL Trigger: GAGGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | ATTCTGGACAGCTTGGAAGGCTTTGAGATACTCCATGCTCAGCAGTaGCTGGGGCAATTCTCTCAGAAAGAGCTTCAGCAGGCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ILDSLEGFEILHAQQ*LGQFSQKELQQAGR Trigger: GCGGCCAGCCTGCTGAAGCTCTTTCTGAGAGAATTGCCCCAGCCACTGCTGAGCATGGAGTATCTCAAAGCCTTCCAAGCTGTCCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CCA 90 bp | GATCGATCAAATGGAGGCCTCTCGGGAACTTTGGTGGAGCCTTCTTaGTTTATGGTGTATTGGCCATATCTGCGACTGGAGGTGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DRSNGGLSGTLVEPS*FMVYWPYLRLEVAS Trigger: CGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | CCTGAGAACTCGATCGATCAAATGGAGGCCTCTCGGGAACTTTGGTaGAGCCTTCTTGGTTTATGGTGTATTGGCCATATCTGCGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PENSIDQMEASRELW*SLLGLWCIGHICDW Trigger: CCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGTTCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGAACTTTCTTCATGTCTaGGGGTGCCAAGTCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GITTAPIPSATKAPIHRLNFLHV*GCQVSN Trigger: ATTGGAGACTTGGCACCCCAAGACATGAAGAAAGTT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGAAGATTCTGGACAGCTaGGAAGGCTTTGAGATACTC | + |
|
Preference number: 5 (lower is better) Translates to: GITTAPIPSATKAPIHRLKILDS*EGFEIL Trigger: GAGTATCTCAAAGCCTTCCAAGCTGTCCAGAATCTT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGACTGTTCCTTTCTGGTaGGAAGATTCTGGACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GITTAPIPSATKAPIHRLTVPFW*EDSGQL Trigger: AAGCTGTCCAGAATCTTCCAACCAGAAAGGAACAGT...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | CTGTTCACTGGACTTCAAGCCCAGCGTGTGGCACATGAAGAGATTTaGGGCCATGACCATTGCTACATTCCCAGCTGTCATCTTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFTGLQAQRVAHEEI*GHDHCYIPSCHLVL Trigger: AAGAACAAGATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGCCACACGCTGGGCTTGAAGTCCAGTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | GCCATTTCAAATTCTCGCTGTTCACTGGACTTCAAGCCCAGCGTGTaGCACATGAAGAGATTTGGGGCCATGACCATTGCTACATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AISNSRCSLDFKPSV*HMKRFGAMTIATFP Trigger: TGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGCCACACGCTGGGCTTGAAGTCCAGTGAACAGCGAGAATTTGAAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | ACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTCATGGCCTCTTGACCTTCTaGGCGATTTTCATTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: THPQAALVIVCSTLPCSHGLLTF*AIFIRP Trigger: AGGTCGAATGAAAATCGCCAAGAAGGTCAAGAGGCC...ATGAGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 90 bp | ACTGTTCCTTTCTGGTTGGAAGATTCTGGACAGCTTGGAAGGCTTTaGGATACTCCATGCTCAGCAGTGGCTGGGGCAATTCTCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVPFWLEDSGQLGRL*DTPCSAVAGAILSE Trigger: TTCTGAGAGAATTGCCCCAGCCACTGCTGAGCATGGAGTATCTCAAAGCCTTCCAAGCTGTCCAGAATCTTCCAACCAGAAAGGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | AATCCTGAGAACTCGATCGATCAAATGGAGGCCTCTCGGGAACTTTaGTGGAGCCTTCTTGGTTTATGGTGTATTGGCCATATCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: NPENSIDQMEASREL*WSLLGLWCIGHICD Trigger: GTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGTTCTCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGTTCCCAGCTGTCATCTaGTTCTTCTCTTTGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: GITTAPIPSATKAPIHRLFPAVI*FFSLLS Trigger: AGATAACAAAGAGAAGAACAAGATGACAGCTGGGAA...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 90 bp | CAAGCAAGGCCTTCAGTGTGTCTCTGTTTGCGTCAGGTAGAAGAATaGCAAGGAGGTTCAAAGCCTGCAACTGTTCCTTTCTGGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QARPSVCLCLRQVEE*QGGSKPATVPFWLE Trigger: TTCCAACCAGAAAGGAACAGTTGCAGGCTTTGAACCTCCTTGTCATTCTTCTACCTGACGCAAACAGAGACACACTGAAGGCCTTGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 90 bp | TCATGGCTGCTCCTGGTATCCGTAGGAGGCCCTCGGTTTCCAGACTaGCTTCTTCAATTCGAGAAATCAGTTTTTGAAAGATCAAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SWLLLVSVGGPRFPD*LLQFEKSVFERSRV Trigger: TACCCTTGATCTTTCAAAAACTGATTTCTCGAATTGAAGAAGGCAGTCTGGAAACCGAGGGCCTCCTACGGATACCAGGAGCAGCCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 90 bp | TTTCCTCCAATCTCATACAGGAAAACTTCTCCTTTCTTGAGTGTCTaGGCAACCCCACTTTCTTGGCTGAGAAACCTGGCAAGCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: FPPISYRKTSPFLSV*ATPLSWLRNLASTS Trigger: CGATGTGCTTGCCAGGTTTCTCAGCCAAGAAAGTGGGGTTGCCCAGACACTCAAGAAAGGAGAAGTTTTCCTGTATGAGATTGGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCTTTGGTGGAGCCTTCTaGGTTTATGGTGTATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKSNGTNESPWHNHSTHSFGGAF*VYGVLA Trigger: GGCCAATACACCATAAACCAAGAAGGCTCCACCAAA...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCATCTGGAGGTTTTTCTaGTGCCTCTCTCTGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKSNGTNESPWHNHSTHSIWRFF*CLSLLS Trigger: GCTCAACAGAGAGAGGCACAAGAAAAACCTCCAGAT...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GGCATAACCACAGCACCCATTCCTAGTGCTACCAAAGCACCCATCCACAGGCTGTCGAGAAATCAGTTTTaGAAAGATCAAGGGTATTCG | + |
|
Preference number: 5 (lower is better) Translates to: GITTAPIPSATKAPIHRLSRNQF*KDQGYS Trigger: CGAATACCCTTGATCTTTCAAAAACTGATTTCTCGA...CAGCCTGTGGATGGGTGCTTTGGTAGCACTAGGAATGGGTGCTGTGGTTATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 90 bp | TCTCTGTTTGCGTCAGGTAGAAGAATGACAAGGAGGTTCAAAGCCTaGAACTGTTCCTTTCTGGTTGGAAGATTCTGGACAGCTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLFASGRRMTRRFKA*NCSFLVGRFWTAWK Trigger: CTTCCAAGCTGTCCAGAATCTTCCAACCAGAAAGGAACAGTTGCAGGCTTTGAACCTCCTTGTCATTCTTCTACCTGACGCAAACAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 90 bp | CAAGCCCAGCGTGTGGCACATGAAGAGATTTGGGGCCATGACCATTaGTACATTCCCAGCTGTCATCTTGTTCTTCTCTTTGTTATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: QAQRVAHEEIWGHDH*YIPSCHLVLLFVIY Trigger: ATAGATAACAAAGAGAAGAACAAGATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGCCACACGCTGGGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCTTGTGCCTCTCTCTGTaGAGCAAATATGTCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TKSNGTNESPWHNHSTHSLCLSL*SKYVSD Trigger: GTCAGAGACATATTTGCTCAACAGAGAGAGGCACAA...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTTCTTTTCCTTGGCCTTaGTTTTCGTTTGTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: STHPQAALVIVCSTLPCSSFPWP*FSFVLT Trigger: AGTCAGAACAAACGAAAACAAAGGCCAAGGAAAAGA...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCTCCAATAGGCTTCCATaGATTCATCCAAGGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TKSNGTNESPWHNHSTHSSNRLP*IHPRNP Trigger: AGGATTCCTTGGATGAATCAATGGAAGCCTATTGGA...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | AGCACCCATCCACAGGCTGCTCTCGTCATTGTATGCTCAACACTTCCCTGTTCTTTTTCATTCGACCTCTaGATGTTTTCTAGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: STHPQAALVIVCSTLPCSFSFDL*MFSSSV Trigger: GACAGAACTAGAAAACATCAAGAGGTCGAATGAAAA...AGAACAGGGAAGTGTTGAGCATACAATGACGAGAGCAGCCTGTGGATGGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCACAGCTTTCTGTTGTTaGAATTCCAAGCCCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: TKSNGTNESPWHNHSTHSTAFCC*NSKPNT Trigger: TGTGTTGGGCTTGGAATTCAAACAACAGAAAGCTGT...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCTGCTACTTTTATTTACACTCTCGACCCAGCAAGAATGATGACACGTCCAAAACTTCTCCTTTCTaGAGTGTCTGGGCAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ETCYFYLHSRPSKNDDTSKTSPF*SVWATP Trigger: TGGGGTTGCCCAGACACTCAAGAAAGGAGAAGTTTT...GGACGTGTCATCATTCTTGCTGGGTCGAGAGTGTAAATAAAAGTAGCAGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 90 bp | CTGGAGGTTTTTCTTGTGCCTCTCTCTGTTGAGCAAATATGTCTCTaGCGTCACGAATGTGGTGCTGTTTGTTTTTCTTCCTCAAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEVFLVPLSVEQICL*RHECGAVCFSSSRS Trigger: AGACCTTGAGGAAGAAAAACAAACAGCACCACATTCGTGACGTCAGAGACATATTTGCTCAACAGAGAGAGGCACAAGAAAAACCTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTGTCACAGTGTGGTCTGTGCACAAAAAGCCCTGGGGATAATACTTTGCCTGATCATCTTTTCCTaGGCCTTTGTTTTCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFCHSVVCAQKALGIILCLIIFS*AFVFVC Trigger: ACAAACGAAAACAAAGGCCAAGGAAAAGATGATCAG...GCAAAGTATTATCCCCAGGGCTTTTTGTGCACAGACCACACTGTGACAGAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | TTAAATACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCGCCGCATCGTGCTGTTaGACACTTTCCCAATTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNTKSNGTNESPWHNHSTAASCC*TLSQLK Trigger: TTTCAATTGGGAAAGTGTCAAACAGCACGATGCGGC...GGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGTATTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 90 bp | TCTTCCAGTTCTCCCTCATCAGGTTCTTTGACAACTATGGCCTCTTaGCCTTCTTGGCGATTTTCATTCGACCTCTTGATGTTTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSPSSGSLTTMAS*PSWRFSFDLLMFSS Trigger: ACTAGAAAACATCAAGAGGTCGAATGAAAATCGCCAAGAAGGTCAAGAGGCCATAGTTGTCAAAGAACCTGATGAGGGAGAACTGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039557.9 ENSMUST00000135866.2 ENSMUST00000176060.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAAAGCAATGGCACGAATGAATCCCCATGGCATAACCACAGCACCCATTCCGAACATCAGCACCATTaGCAGTTTTATCTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TKSNGTNESPWHNHSTHSEHQHH*QFYLAF Trigger: AAAAGCAAGATAAAACTGCAAATGGTGCTGATGTTC...GGAATGGGTGCTGTGGTTATGCCATGGGGATTCATTCGTGCCATTGCTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCTGCTACTTTTATTTACACTCTCGACCCAGCAAGAATGATGACACGTCCTTTCACAGCTTTCTGTaGTTTGAATTCCAAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETCYFYLHSRPSKNDDTSFHSFL*FEFQAQ Trigger: TTGGGCTTGGAATTCAAACAACAGAAAGCTGTGAAA...GGACGTGTCATCATTCTTGCTGGGTCGAGAGTGTAAATAAAAGTAGCAGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTGATAGACCTGCTTCTTaGAGCCATTCTTCTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YFISLIYSRGLCSVTVWSDRPAS*SHSSSS Trigger: ACTGGAAGAAGAATGGCTCAAAGAAGCAGGTCTATC...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTATTGGTTTATGGTGTATaGGCCATATCTGCGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLLVYGV*AISATG Trigger: TCCAGTCGCAGATATGGCCAATACACCATAAACCAA...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTAAATGACACCTCCAGATaGATGTCTGTTTCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLNDTSR*MSVSEA Trigger: TGCCTCTGAAACAGACATCAATCTGGAGGTGTCATT...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTACCAAGTCTCCAATCCTaGTCGTACCTGTTTTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLPSLQS*SYLFYL Trigger: AAGATAAAACAGGTACGACAAGGATTGGAGACTTGG...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACAAGCTAATTAAGCCCCTTTCTTCTTACTCCAGCAATATTTATTTTCTAGTTATCTATGACTCTTaGGAGAAATTCAAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHKLIKPLSSYSSNIYFLVIYDS*EKFKQG Trigger: GCCTTGCTTGAATTTCTCCAAAGAGTCATAGATAAC...TAGAAAATAAATATTGCTGGAGTAAGAAGAAAGGGGCTTAATTAGCTTGTGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS-3UTR CAA 90 bp | TATTTCATTTCTCTTATTTACAGCAGAGGTCTGTGTTCTGTCACAGTGTGGTCTCTTCAGTTAGCTGTATaGCCATGGAAACTTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YFISLIYSRGLCSVTVWSLQLAV*PWKLLK Trigger: TTTCAAAAGTTTCCATGGCAATACAGCTAACTGAAG...AGACCACACTGTGACAGAACACAGACCTCTGCTGTAAATAAGAGAAATGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | CTGCGACTGGAGGTGGCTTCGTCGCCTCCCTTTACATaGCTGTCCCCAGCGACCTGGTCCTTGCCGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLEVASSPPFT*LSPATWSLPLG Trigger: CCCCAGCGGCAAGGACCAGGTCGCTGGGGACAGCCATGTAAAGGGAGGCGACGAAGCCACCTCCAGTCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 72 bp | CTCCCTTTACATGGCTGTCCCCAGCGACCTGGTCCTTaGCGCTGGGGTGGTAAGCAGTTAGCACAACTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPLHGCPQRPGP*RWGGKQLAQLP Trigger: CGGGAGTTGTGCTAACTGCTTACCACCCCAGCGGCAAGGACCAGGTCGCTGGGGACAGCCATGTAAAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | TTACATGGCTGTCCCCAGCGACCTGGTCCTTGCCGCTaGGGTGGTAAGCAGTTAGCACAACTCCCGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LHGCPQRPGPCR*GGKQLAQLPRN Trigger: GTTCCTCGGGAGTTGTGCTAACTGCTTACCACCCCAGCGGCAAGGACCAGGTCGCTGGGGACAGCCATGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 72 bp | GTCTGTTTCAGAGGCAGGTGTGTCCTCAGGCACCCGTaGGATCTGCTCCTTGCTATCGACAGCCCCACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VCFRGRCVLRHP*DLLLAIDSPTR Trigger: TCTAGTGGGGCTGTCGATAGCAAGGAGCAGATCTCACGGGTGCCTGAGGACACACCTGCCTCTGAAACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
||
| CDS CAA 90 bp | AGGCCTCTCGGGAACTTTGGTGGAGCCTTCTTGGTTTATGGTGTATaGGCCATATCTGCGACTGGAGGTGGCTTCGTCGCCTCCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: RPLGNFGGAFLVYGV*AISATGGGFVASLY Trigger: GTAAAGGGAGGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CAA 72 bp | GGGAACTTTGGTGGAGCCTTCTTGGTTTATGGTGTATaGGCCATATCTGCGACTGGAGGTGGCTTCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GNFGGAFLVYGV*AISATGGGFVA Trigger: GGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 72 bp | TCTCTCAGAAAGAGCTTCAGCAGGCTGGCCGCATCGTaGTGTTTGACACTTTCCCAATTGAAAGTCCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLRKSFSRLAAS*CLTLSQLKVPS Trigger: CGAGGGGACTTTCAATTGGGAAAGTGTCAAACAGCACGATGCGGCCAGCCTGCTGAAGCTCTTTCTGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | GGAACTTTGGTGGAGCCTTCTTGGTTTATGGTGTATTaGCCATATCTGCGACTGGAGGTGGCTTCGTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTLVEPSWFMVY*PYLRLEVASSP Trigger: AGGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | GCCTCTCGGGAACTTTGGTGGAGCCTTCTTGGTTTATaGTGTATTGGCCATATCTGCGACTGGAGGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASRELWWSLLGL*CIGHICDWRWL Trigger: AAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | GGACTTCAAGCCCAGCGTGTGGCACATGAAGAGATTTaGGGCCATGACCATTGCTACATTCCCAGCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLQAQRVAHEEI*GHDHCYIPSCH Trigger: ATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGCCACACGCTGGGCTTGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CAA 90 bp | CGATCGATCAAATGGAGGCCTCTCGGGAACTTTGGTGGAGCCTTCTaGGTTTATGGTGTATTGGCCATATCTGCGACTGGAGGTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSIKWRPLGNFGGAF*VYGVLAISATGGGF Trigger: GAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | AATGGAGGCCTCTCGGGAACTTTGGTGGAGCCTTCTTaGTTTATGGTGTATTGGCCATATCTGCGACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NGGLSGTLVEPS*FMVYWPYLRLE Trigger: CTCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | TCTCCTTTCTTGAGTGTCTGGGCAACCCCACTTTCTTaGCTGAGAAACCTGGCAAGCACATCGCTGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPFLSVWATPLS*LRNLASTSLAF Trigger: AAAAGCCAGCGATGTGCTTGCCAGGTTTCTCAGCCAAGAAAGTGGGGTTGCCCAGACACTCAAGAAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CAA 72 bp | TTCTCCTTTCTTGAGTGTCTGGGCAACCCCACTTTCTaGGCTGAGAAACCTGGCAAGCACATCGCTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSFLECLGNPTF*AEKPGKHIAGF Trigger: AAAGCCAGCGATGTGCTTGCCAGGTTTCTCAGCCAAGAAAGTGGGGTTGCCCAGACACTCAAGAAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 72 bp | TTCTGGTTGGAAGATTCTGGACAGCTTGGAAGGCTTTaGGATACTCCATGCTCAGCAGTGGCTGGGGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: FWLEDSGQLGRL*DTPCSAVAGAI Trigger: AATTGCCCCAGCCACTGCTGAGCATGGAGTATCTCAAAGCCTTCCAAGCTGTCCAGAATCTTCCAACCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | TTCATCCAAGGAATCCTGAGAACTCGATCGATCAAATaGAGGCCTCTCGGGAACTTTGGTGGAGCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FIQGILRTRSIK*RPLGNFGGAFL Trigger: CAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGTTCTCAGGATTCCTTGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CAA 72 bp | AAATGGAGGCCTCTCGGGAACTTTGGTGGAGCCTTCTaGGTTTATGGTGTATTGGCCATATCTGCGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KWRPLGNFGGAF*VYGVLAISATG Trigger: TCCAGTCGCAGATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CAA 72 bp | GAACTCGATCGATCAAATGGAGGCCTCTCGGGAACTTaGGTGGAGCCTTCTTGGTTTATGGTGTATTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ELDRSNGGLSGT*VEPSWFMVYWP Trigger: TGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS TCA 72 bp | CTGATCTTCTGCGTCCTCTCCTTACTGAACTCTTTCTaGTTGACAGCTTGCTCCGCAAATGACACCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LIFCVLSLLNSF*LTACSANDTSR Trigger: TCTGGAGGTGTCATTTGCGGAGCAAGCTGTCAATCAGAAAGAGTTCAGTAAGGAGAGGACGCAGAAGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
||
| CDS CCA 72 bp | TCGATCGATCAAATGGAGGCCTCTCGGGAACTTTGGTaGAGCCTTCTTGGTTTATGGTGTATTGGCCATATC | + |
|
Preference number: 6 (lower is better) Translates to: SIDQMEASRELW*SLLGLWCIGHI Trigger: GATATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS CCA 72 bp | AACTCGATCGATCAAATGGAGGCCTCTCGGGAACTTTaGTGGAGCCTTCTTGGTTTATGGTGTATTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NSIDQMEASREL*WSLLGLWCIGH Trigger: ATGGCCAATACACCATAAACCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 72 bp | CTCCTGGTATCCGTAGGAGGCCCTCGGTTTCCAGACTaGCTTCTTCAATTCGAGAAATCAGTTTTTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLVSVGGPRFPD*LLQFEKSVFER Trigger: TCTTTCAAAAACTGATTTCTCGAATTGAAGAAGGCAGTCTGGAAACCGAGGGCCTCCTACGGATACCAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
||
| CDS GCA 72 bp | GCGTCAGGTAGAAGAATGACAAGGAGGTTCAAAGCCTaGAACTGTTCCTTTCTGGTTGGAAGATTCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: ASGRRMTRRFKA*NCSFLVGRFWT Trigger: TGTCCAGAATCTTCCAACCAGAAAGGAACAGTTGCAGGCTTTGAACCTCCTTGTCATTCTTCTACCTGACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS GCA 72 bp | CGTGTGGCACATGAAGAGATTTGGGGCCATGACCATTaGTACATTCCCAGCTGTCATCTTGTTCTTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RVAHEEIWGHDH*YIPSCHLVLLF Trigger: AAAGAGAAGAACAAGATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGCCACACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CAA 72 bp | GCAAATATGTCTCTGACGTCACGAATGTGGTGCTGTTaGTTTTTCTTCCTCAAGGTCTGGGAGACCGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ANMSLTSRMWCC*FFFLKVWETVS Trigger: GGAAACGGTCTCCCAGACCTTGAGGAAGAAAAACAAACAGCACCACATTCGTGACGTCAGAGACATATTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
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| CDS CAA 72 bp | TTATCTTTTGGCAGTCTGAAACTGGGCAAAGAGTCGTaGCTGCTGATCTTCTGCGTCCTCTCCTTACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LSFGSLKLGKES*LLIFCVLSLLN Trigger: GTTCAGTAAGGAGAGGACGCAGAAGATCAGCAGCAACGACTCTTTGCCCAGTTTCAGACTGCCAAAAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS TCA 72 bp | TCTCCCTCATCAGGTTCTTTGACAACTATGGCCTCTTaGCCTTCTTGGCGATTTTCATTCGACCTCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: SPSSGSLTTMAS*PSWRFSFDLLM Trigger: CATCAAGAGGTCGAATGAAAATCGCCAAGAAGGTCAAGAGGCCATAGTTGTCAAAGAACCTGATGAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039557.9 ENSMUST00000135866.2 ENSMUST00000176060.8 |
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| CDS TCA 72 bp | GCCATTCTTCTTCCAGTTCTCCCTCATCAGGTTCTTTaGCAACTATGGCCTCTTGACCTTCTTGGCGATTTT | + |
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Preference number: 6 (lower is better) Translates to: AILLPVLPHQVL*QLWPLDLLGDF Trigger: AAAATCGCCAAGAAGGTCAAGAGGCCATAGTTGTCAAAGAACCTGATGAGGGAGAACTGGAAGAAGAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039557.9 ENSMUST00000135866.2 ENSMUST00000176060.8 |
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| CDS TCA 72 bp | TTTGAAAGATGGGGAGCTTGCACTCGAATCACTCCCTaGGGAACATCAGCACCATTTGCAGTTTTATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FERWGACTRITP*GTSAPFAVLSC Trigger: GCAAGATAAAACTGCAAATGGTGCTGATGTTCCTCAGGGAGTGATTCGAGTGCAAGCTCCCCATCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CAA 72 bp | TTTCCTCCAATCTCATACAGGAAAACTTCTCCTTTCTaGAGTGTCTGGGCAACCCCACTTTCTTGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: FPPISYRKTSPF*SVWATPLSWLR Trigger: TCTCAGCCAAGAAAGTGGGGTTGCCCAGACACTCAAGAAAGGAGAAGTTTTCCTGTATGAGATTGGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CAA 72 bp | TTCTCCCTCATCAGGTTCTTTGACAACTATGGCCTCTaGACCTTCTTGGCGATTTTCATTCGACCTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FSLIRFFDNYGL*TFLAIFIRPLD Trigger: ATCAAGAGGTCGAATGAAAATCGCCAAGAAGGTCAAGAGGCCATAGTTGTCAAAGAACCTGATGAGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039557.9 ENSMUST00000135866.2 ENSMUST00000176060.8 |
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| CDS CAA 72 bp | CTTTCCTGCGGGTCATCAATAGACTCTCCAAAAAGATaGGATAGACCTGCTTCTTTGAGCCATTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSCGSSIDSPKR*DRPASLSHSSS Trigger: GGAAGAAGAATGGCTCAAAGAAGCAGGTCTATCCAATCTTTTTGGAGAGTCTATTGATGACCCGCAGGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039557.9 ENSMUST00000135866.2 ENSMUST00000176060.8 |
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| CDS TCA 72 bp | TTTCTTGTGCCTCTCTCTGTTGAGCAAATATGTCTCTaGCGTCACGAATGTGGTGCTGTTTGTTTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLVPLSVEQICL*RHECGAVCFSS Trigger: GGAAGAAAAACAAACAGCACCACATTCGTGACGTCAGAGACATATTTGCTCAACAGAGAGAGGCACAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
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| CDS TCA 72 bp | GATCATCTTTTCCTTGGCCTTTGTTTTCGTTTGTTCTaGCTGACCGCAAGTCTGAGTCATCTGGAGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: DHLFLGLCFRLF*LTASLSHLEVF Trigger: AAAAACCTCCAGATGACTCAGACTTGCGGTCAGTCAGAACAAACGAAAACAAAGGCCAAGGAAAAGATGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039557.9 ENSMUST00000176060.8 |
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| CDS CAA 72 bp | ATAGACTCTCCAAAAAGATTGGATAGACCTGCTTCTTaGAGCCATTCTTCTTCCAGTTCTCCCTCATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IDSPKRLDRPAS*SHSSSSSPSSG Trigger: ACCTGATGAGGGAGAACTGGAAGAAGAATGGCTCAAAGAAGCAGGTCTATCCAATCTTTTTGGAGAGTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039557.9 ENSMUST00000135866.2 ENSMUST00000176060.8 |
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| CDS CAA 72 bp | TTAGTTCTTCAGTTAGCTGTATTGCCATGGAAACTTTaGAAAGATGGGGAGCTTGCACTCGAATCACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LVLQLAVLPWKL*KDGELALESLP Trigger: AGGGAGTGATTCGAGTGCAAGCTCCCCATCTTTCAAAAGTTTCCATGGCAATACAGCTAACTGAAGAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CAA 90 bp | ATTCCCAGCTGTCATCTTGTTCTTCTCTTTGTTATCTATGACTCTTaGGAGAAATTCAAGCAAGGCCTTCAGTGTGTCTCTGTTTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: IPSCHLVLLFVIYDS*EKFKQGLQCVSVCV Trigger: GACGCAAACAGAGACACACTGAAGGCCTTGCTTGAATTTCTCCAAAGAGTCATAGATAACAAAGAGAAGAACAAGATGACAGCTGGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CAA 90 bp | AAGAGATTTGGGGCCATGACCATTGCTACATTCCCAGCTGTCATCTaGTTCTTCTCTTTGTTATCTATGACTCTTTGGAGAAATTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: KRFGAMTIATFPAVI*FFSLLSMTLWRNSS Trigger: GCTTGAATTTCTCCAAAGAGTCATAGATAACAAAGAGAAGAACAAGATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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| CDS CAA 72 bp | TGTCATCTTGTTCTTCTCTTTGTTATCTATGACTCTTaGGAGAAATTCAAGCAAGGCCTTCAGTGTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CHLVLLFVIYDS*EKFKQGLQCVS Trigger: AGAGACACACTGAAGGCCTTGCTTGAATTTCTCCAAAGAGTCATAGATAACAAAGAGAAGAACAAGATGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039557.9 |
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