Pregenerated sensors for ARHGAP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037148Ensembl transcript IDs: ENSMUST00000076316.6, ENSMUST00000210519.2, ENSMUST00000210922.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACATCTGCACAGTCCTAGGTGGCTGTTCCATCCCCTCCCCACCCTaGAGTACCCATGGTGAACCGCAGATCCTAAGCGTGACCGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: HICTVLGGCSIPSPP*STHGEPQILSVTVV Trigger: CACCACGGTCACGCTTAGGATCTGCGGTTCACCATGGGTACTCCAGGGTGGGGAGGGGATGGAACAGCCACCTAGGACTGTGCAGATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR TCA 90 bp | CCTAGGTGGCTGTTCCATCCCCTCCCCACCCTGGAGTACCCATGGTaGACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTT | + |
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Preference number: 1 (lower is better) Translates to: PRWLFHPLPTLEYPW*TADPKRDRGVWVPF Trigger: AAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGTTCACCATGGGTACTCCAGGGTGGGGAGGGGATGGAACAGCCACCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR GCA 90 bp | ACCCATGGTGAACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTaGCATTTCCAGGCTGCTGCTTGGGGTGCCACGATCAGTAGGACC | + |
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Preference number: 1 (lower is better) Translates to: THGEPQILSVTVVFG*HFQAAAWGATISRT Trigger: GGTCCTACTGATCGTGGCACCCCAAGCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGTTCACCATGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCCGGGGAGGGGGTGAAGAAGTTTCTCTCTaGTTCCCTCCAGGTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: KHTGELGAAAGGQARGGGEEVSL*FPPGWD Trigger: GTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTC...ACCCCCTCCCCGGGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR CCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGCTGCACAGTCCTAGGTaGCTGTTCCATCCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: NPTAGVWTVRSALSLFHRLHSPR*LFHPLP Trigger: GGGGAGGGGATGGAACAGCCACCTAGGACTGTGCAG...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR CCA 90 bp | GTCACGCTCTGCTTCCGCCCACATCTGCACAGTCCTAGGTGGCTGTTCCATCCCCGTGACCGTGGTGTTTaGGTGCCATTTCCAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VTLCFRPHLHSPRWLFHPRDRGV*VPFPGC Trigger: GCAGCCTGGAAATGGCACCCAAACACCACGGTCACG...GGGATGGAACAGCCACCTAGGACTGTGCAGATGTGGGCGGAAGCAGAGCGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAACGGGTGTGTGGACAGTaGGGTCTGCCCTCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SLCFPPGWDFRESRSPPERVCGQ*GLPSLC Trigger: ACAGAGAGAGGGCAGACCTCACTGTCCACACACCCG...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCCCACAGCGGGTGTGTaGACAGTGAGGTCTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHPTAGV*TVRSAL Trigger: GAGGGCAGACCTCACTGTCCACACACCCGCTGTGGG...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR CCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGTTCCAGGCTGCTGCTTaGGGTGCCACGATCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GTSLKKFLSASLQVGTFEFQAAA*GATISR Trigger: CCTACTGATCGTGGCACCCCAAGCAGCAGCCTGGAA...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR GCA 90 bp | CACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGGTGCCATTTCCAGGCTaGTGCTTGGGGTGCCACGAT | + |
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Preference number: 2 (lower is better) Translates to: HKLEEVSLCFPPGWDFREVPFPG*CLGCHD Trigger: ATCGTGGCACCCCAAGCAGCAGCCTGGAAATGGCAC...CTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR GCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGACCGTGGTGTTTGGGTaGCATTTCCAGGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GTSLKKFLSASLQVGTFETVVFG*HFQAAA Trigger: AGCAGCAGCCTGGAAATGGCACCCAAACACCACGGT...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR-3UTR GCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGGTGGACAGTGAGGTCTaGCCTCTCTCTGTTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: GTSLKKFLSASLQVGTFEVDSEV*PLSVPQ Trigger: CTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCAC...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR GCA 72 bp | CAGCAACGCCAGTCACGCTCTGCTTCCGCCCACATCTaGACAGTCCTAGGTGGCTGTTCCATCCCCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: QQRQSRSASAHI*TVLGGCSIPSP Trigger: TGGGGAGGGGATGGAACAGCCACCTAGGACTGTGCAGATGTGGGCGGAAGCAGAGCGTGACTGGCGTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR GCA 72 bp | GAACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTaGCATTTCCAGGCTGCTGCTTGGGGTGCCACGATC | + |
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Preference number: 3 (lower is better) Translates to: EPQILSVTVVFG*HFQAAAWGATI Trigger: GATCGTGGCACCCCAAGCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR CCA 72 bp | ACAGTCCTAGGTGGCTGTTCCATCCCCTCCCCACCCTaGAGTACCCATGGTGAACCGCAGATCCTAAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: TVLGGCSIPSPP*STHGEPQILSV Trigger: CACGCTTAGGATCTGCGGTTCACCATGGGTACTCCAGGGTGGGGAGGGGATGGAACAGCCACCTAGGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR CCA 72 bp | AAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTaGGACTTTCGAGAGTCACGCAGTCCCCCTGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: KLEEVSLCFPPG*DFRESRSPPEN Trigger: GTTTTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTCGAGCTCCGCTTCGTaGGCGCGGATCCTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: NPTAGVWTVRSALSLFHRSSSAS*ARILSR Trigger: CCGGGAGAGGATCCGCGCGCACGAAGCGGAGCTCGA...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | AAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCCGGGGAGGGGGTGTACAGGTAGCCTTCTaGTGTGAACTGGCTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: KHTGELGAAAGGQARGGGVQVAF*CELAGS Trigger: CGAGCCAGCCAGTTCACAGCAGAAGGCTACCTGTAC...ACCCCCTCCCCGGGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | AAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCCGGGGAGGGGGTGCAGCTTGTCTACAATaGAGGCAGCAGGAGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KHTGELGAAAGGQARGGGAACLQ*RQQERG Trigger: CCCTCTCTCCTGCTGCCTCCATTGTAGACAAGCTGC...ACCCCCTCCCCGGGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | AAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCCGGGGAGGGGGTGGTGTGGTTGGAGACTaGATATTTAGCCACTGCACC | + |
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Preference number: 4 (lower is better) Translates to: KHTGELGAAAGGQARGGGGVVGD*IFSHCT Trigger: GGTGCAGTGGCTAAATATGCAGTCTCCAACCACACC...ACCCCCTCCCCGGGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTCTGGCTTGGCGTGGTaGCGGTGGCATCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: NPTAGVWTVRSALSLFHRSGLAW*RWHLHS Trigger: GCTGTGGAGATGCCACCGCCACCACGCCAAGCCAGA...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGGAATCAGCCCTCGCTTaGCGTTCAGGGTCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NPTAGVWTVRSALSLFHRESALA*RSGSLP Trigger: TGGAAGGGACCCTGAACGGCAAGCGAGGGCTGATTC...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | GATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTTGGGGCGGTTCTGCTCCACTTaGAGGTCGGCCTCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: DPKRDRGVWVPFPGCCLGRFCST*RSASCK Trigger: CTTGCAGGAGGCCGACCTCCAAGTGGAGCAGAACCG...CCCCAAGCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGCCTTCTGCTGTGAACTaGCTGGCTCGCTTCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NPTAGVWTVRSALSLFHRPSAVN*LARFWS Trigger: GGACCAGAAGCGAGCCAGCCAGTTCACAGCAGAAGG...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGAGGAGGTGTTCCAGCTaGGTTGGAGCTTGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NPTAGVWTVRSALSLFHRRRCSS*VGAWCG Trigger: ACCACACCAAGCTCCAACCCAGCTGGAACACCTCCT...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAAGGTAGCCTTCTGCTGTaGACTGGCTGGCTCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLCFPPGWDFRESRSPPEGSLLL*TGWLAS Trigger: AGAAGCGAGCCAGCCAGTTCACAGCAGAAGGCTACC...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGATGGATGGCCGGGTCTaGCTTGGCGTGGTGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: GTSLKKFLSASLQVGTFEMDGRV*LGVVAV Trigger: CACCGCCACCACGCCAAGCCAGACCCGGCCATCCAT...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAAAAGTCTCTGAGCGAGTaGGCGAACTTCCTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLCFPPGWDFRESRSPPEKSLSE*ANFLWA Trigger: TGCCCAGAGGAAGTTCGCTCACTCGCTCAGAGACTT...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | AAAAGGCTGTTGAAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCAAGTCTCTGGACCTTTaGACTCACCCCCACAACTCT | + |
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Preference number: 4 (lower is better) Translates to: KRLLKHTGELGAAAGGQAKSLDL*THPHNS Trigger: AGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTT...GGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTTCAACAGCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | AAAAGGCTGTTGAAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCTGGGCTCAGCAAATGTaGTATCAGGCGAGGTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: KRLLKHTGELGAAAGGQAWAQQM*YQARFE Trigger: TTCGAACCTCGCCTGATACCACATTTGCTGAGCCCA...GGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTTCAACAGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | GGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTGGGAGAATTATTAGCCACTGCACCATaGATGGCCGGGTCTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GCVDSEVCPLSVPQVGELLATAP*MAGSGL Trigger: CAAGCCAGACCCGGCCATCCATGGTGCAGTGGCTAA...TAATTCTCCCACCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | ACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCGTAACTCATAGGTCATaGGAGGCTCTGGAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: TADPKRDRGVWVPFPGCCVTHRS*EALEDS Trigger: GGAGTCTTCCAGAGCCTCTCATGACCTATGAGTTAC...GCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | GATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTTGGGGTGGCTGGCTCGCTTCTaGTCCTTGGGATTTTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: DPKRDRGVWVPFPGCCLGWLARF*SLGFCL Trigger: TAGACAAAATCCCAAGGACCAGAAGCGAGCCAGCCA...CCCCAAGCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | AACCCCACAGCGGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGATGCTGACAGGCATGTaGGCTCAGCAAATGTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: NPTAGVWTVRSALSLFHRMLTGM*AQQMWY Trigger: ATACCACATTTGCTGAGCCCACATGCCTGTCAGCAT...CCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCCGCTGTGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGGGGCAGCTGACGTTGTaGGAGATGGGGTGGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GTSLKKFLSASLQVGTFEGQLTL*EMGWRE Trigger: CTCTCTCCACCCCATCTCCCACAACGTCAGCTGCCC...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| 3UTR CAA 72 bp | ACAAACAGCACTCAGGTGAGCACCTGGAAAAGGCTGTaGAAGCACACAGGTGAGCTTGGTGCAGCTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TNSTQVSTWKRL*KHTGELGAAAG Trigger: ACCGGCAGCTGCACCAAGCTCACCTGTGTGCTTCAACAGCCTTTTCCAGGTGCTCACCTGAGTGCTGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | GTCACGCTCTGCTTCCGCCCACATCTGCACAGTCCTAGGTGGCTGTTCCATCCCGGCTCCTATTTCAAATaGCAATTCCGAGCTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VTLCFRPHLHSPRWLFHPGSYFK*QFRAVF Trigger: GAACACAGCTCGGAATTGTCATTTGAAATAGGAGCC...GGGATGGAACAGCCACCTAGGACTGTGCAGATGTGGGCGGAAGCAGAGCGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCCATCCGGGTTCCCTTaGGGTCTGAACATCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHPSGFP*GLNILK Trigger: TTTGAGGATGTTCAGACCTCAAGGGAACCCGGATGG...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | GGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTGGGAGAATTAGGTCTCTTCGTCCTCTaGCCTTGTCTCTTGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: GCVDSEVCPLSVPQVGELGLFVL*PCLLDC Trigger: ACAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACC...TAATTCTCCCACCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | AAAAGGCTGTTGAAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCTCTTGGCTGGAACAATaGAGTCTCTGTGTAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: KRLLKHTGELGAAAGGQASWLEQ*SLCVTH Trigger: ATGAGTTACACAGAGACTTCATTGTTCCAGCCAAGA...GGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTTCAACAGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | GATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTTGGGGAGAGCTTCCAACCACTaGTTCCTCTCTTCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: DPKRDRGVWVPFPGCCLGRASNH*FLSSSE Trigger: TTCAGAAGAAGAGAGGAAGCAGTGGTTGGAAGCTCT...CCCCAAGCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACGGTCATGAGAGGCTCTaGAAGACTCCTCAGATACTG | + |
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Preference number: 4 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHGHERL*KTPQIL Trigger: CAGTATCTGAGGAGTCTTCCAGAGCCTCTCATGACC...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR TCA 90 bp | ACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTCAAGTGCTTGTCGATaGGACTGTAATTCTTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: TADPKRDRGVWVPFPGCCSSACR*DCNSFP Trigger: CGGAAAAGAATTACAGTCTCATCGACAAGCACTTGA...GCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCTTCACTTCCCAATCTaGAGAATTCTCCAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHLHFPI*RILQVQ Trigger: CTGGACCTGGAGAATTCTGCAGATTGGGAAGTGAAG...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR GCA 90 bp | GATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTTGGGGAGACTCCTCAGATACTaGTTCAAGGCACTTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: DPKRDRGVWVPFPGCCLGRLLRY*FKALVT Trigger: AGTAACAAGTGCCTTGAAGCAGTATCTGAGGAGTCT...CCCCAAGCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | ACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTTGTGTACCAAGAAGTaGATGGCATTAACTCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TADPKRDRGVWVPFPGCCLCTKK*MALTRD Trigger: ATCCCGAGTTAATGCCATCCACTTCTTGGTACACAA...GCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTAAGTCCAGGAGGCCCATaGGCAGCTGACGTTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLSPGGP*AADVVG Trigger: TCCCACAACGTCAGCTGCCCATGGGCCTCCTGGACT...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR TCA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTAGGCCTCCTGCAAGTGTaGGTCCTTCTTCCTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLGLLQV*VLLPGR Trigger: TCTGCCAGGAAGAAGGACTCACACTTGCAGGAGGCC...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR GCA 90 bp | GGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTGGGAGAATTAGGATTTCCTGGAGCTTaGACACATATTCAAGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCVDSEVCPLSVPQVGELGFPGA*THIQAR Trigger: TCTCGCTTGAATATGTGTGCAAGCTCCAGGAAATCC...TAATTCTCCCACCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGTTGAAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCAGTCCATGTGCCTTTTaGTGCATTCTTTCAAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRLLKHTGELGAAAGGQASPCAF*CILSKR Trigger: TCTTTTTGAAAGAATGCACCAAAAGGCACATGGACT...GGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTTCAACAGCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CCA 90 bp | ACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCCTCCTTATTCTTCTCTaGCAGTTTGTGTACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TADPKRDRGVWVPFPGCCLLILL*QFVYQE Trigger: TTCTTGGTACACAAACTGCCAGAGAAGAATAAGGAG...GCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR TCA 90 bp | GGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCTGGAAAAGGCTAAGTTCCTCCACTTCTaGTCTGGTTCCCTCAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKVTKDKQHSGEHLEKAKFLHF*SGSLKS Trigger: CGATTTGAGGGAACCAGATCAGAAGTGGAGGAACTT...AGCCTTTTCCAGGTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR GCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGTCCGTGGAGTCCATGTaGCTTTTGGTGCATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSLKKFLSASLQVGTFESVESM*LLVHSF Trigger: GAAAGAATGCACCAAAAGGCACATGGACTCCACGGA...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTAGTGTTCCAGCTGGGTTaGAGCTTGGTGTGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLVFQLG*SLVWLE Trigger: CTCCAACCACACCAAGCTCCAACCCAGCTGGAACAC...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CCA 90 bp | GGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCTGGAAAAGGCTCTTGACATAATTCTGTaGAATCAGCCCTCGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GNKVTKDKQHSGEHLEKALDIIL*NQPSLA Trigger: GGCAAGCGAGGGCTGATTCCACAGAATTATGTCAAG...AGCCTTTTCCAGGTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCTTGATGATAGAAAGTaGACATTCCCTGAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHLDDRK*TFPERR Trigger: CCTTCTTTCAGGGAATGTTCACTTTCTATCATCAAG...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR GCA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTATTCCGAGCTGTGTTCTaGTTCACACGGGTACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLFRAVF*FTRVHC Trigger: GCAGTGTACCCGTGTGAAGCAGAACACAGCTCGGAA...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR TCA 90 bp | GGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACCTGGAAAAGGCTCCATCTTGTAGTGATTaGAGTCTTTGGAAAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GNKVTKDKQHSGEHLEKAPSCSD*SLWKAR Trigger: ACGAGCTTTCCAAAGACTTCAATCACTACAAGATGG...AGCCTTTTCCAGGTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR TCA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTACTTCCTCTCTTCTTCTaGAAACGCCTGCACGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLLPLFF*KRLHGQ Trigger: TTGACCGTGCAGGCGTTTTCAGAAGAAGAGAGGAAG...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CCA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGACTCTGTACAGTCCTTaGTCATTTATACCTCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTSLKKFLSASLQVGTFETLYSP*SFIPRV Trigger: AACCCGAGGTATAAATGACCAAGGACTGTACAGAGT...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR GCA 90 bp | CACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTTTACAGCTCCAAGCTaGTCTTTTCTGAATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKLEEVSLCFPPGWDFREFTAPS*SFLNFS Trigger: GGAGAAATTCAGAAAAGAGCAGCTTGGAGCTGTAAA...CTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS CCA 90 bp | GTGGTGGCGGTGGCATCTCCACAGCTCCCTCCGTCTGCTGCTAGGTaGTTTCCGTCTAGTCCAGGAGGCCCATGGGCAGCTGACGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVAVASPQLPPSAAR*FPSSPGGPWAADVV Trigger: CACAACGTCAGCTGCCCATGGGCCTCCTGGACTAGACGGAAACCACCTAGCAGCAGACGGAGGGAGCTGTGGAGATGCCACCGCCACCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS CCA 90 bp | TATTTAGCCACTGCACCATGGATGGCCGGGTCTGGCTTGGCGTGGTaGCGGTGGCATCTCCACAGCTCCCTCCGTCTGCTGCTAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YLATAPWMAGSGLAW*RWHLHSSLRLLLGG Trigger: ACCACCTAGCAGCAGACGGAGGGAGCTGTGGAGATGCCACCGCCACCACGCCAAGCCAGACCCGGCCATCCATGGTGCAGTGGCTAAATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
||
| CDS CCA 90 bp | GTTGGAGACTGCATATTTAGCCACTGCACCATGGATGGCCGGGTCTaGCTTGGCGTGGTGGCGGTGGCATCTCCACAGCTCCCTCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGDCIFSHCTMDGRV*LGVVAVASPQLPPS Trigger: AGACGGAGGGAGCTGTGGAGATGCCACCGCCACCACGCCAAGCCAGACCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGTTGAAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCCATGGGCAGCTGACGTaGTGGGAGATGGGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KRLLKHTGELGAAAGGQAHGQLT*WEMGWR Trigger: TCTCCACCCCATCTCCCACAACGTCAGCTGCCCATG...GGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTTCAACAGCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | AAGCACACAGGTGAGCTTGGTGCAGCTGCCGGTGGGCAGGCCCGGGGAGGGGGTGCTCGCTTCTGGTCCTaGGGATTTTGTCTAATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KHTGELGAAAGGQARGGGARFWS*GFCLIL Trigger: TAAAATTAGACAAAATCCCAAGGACCAGAAGCGAGC...ACCCCCTCCCCGGGCCTGCCCACCGGCAGCTGCACCAAGCTCACCTGTGTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS TCA 90 bp | ATGCTGCCGGTTCTGCTCCACTTGGAGGTCGGCCTCCTGCAAGTGTaGGTCCTTCTTCCTGGCAGACAGCGTCAAGTGCTTGTCGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: MLPVLLHLEVGLLQV*VLLPGRQRQVLVDE Trigger: CTCATCGACAAGCACTTGACGCTGTCTGCCAGGAAGAAGGACTCACACTTGCAGGAGGCCGACCTCCAAGTGGAGCAGAACCGGCAGCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS GCA 90 bp | CCCAGAGCTTCCAACCACTGCTTCCTCTCTTCTTCTGAAAACGCCTaGACGGTCAAGGGGACGCCAGGCCTGTCAGCAGCTTCGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRASNHCFLSSSENA*TVKGTPGLSAASMS Trigger: TGACATCGAAGCTGCTGACAGGCCTGGCGTCCCCTTGACCGTGCAGGCGTTTTCAGAAGAAGAGAGGAAGCAGTGGTTGGAAGCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS GCA 90 bp | GAAGGAGGTGTTCCAGCTGGGTTGGAGCTTGGTGTGGTTGGAGACTaGATATTTAGCCACTGCACCATGGATGGCCGGGTCTGGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGGVPAGLELGVVGD*IFSHCTMDGRVWLG Trigger: GCCAAGCCAGACCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAACTTCGTCCTCTGCCCTaGTCTCTTGGACTGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCFPPGWDFRESRSPPELRPLP*SLGLSW Trigger: CCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAG...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAAGGTGTTCCAGCTGGGTaGGAGCTTGGTGTGGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLCFPPGWDFRESRSPPEGVPAG*ELGVVG Trigger: TCCAACCACACCAAGCTCCAACCCAGCTGGAACACC...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS CCA 90 bp | ACTGTCACCCTCCTCCAGCTCAAGACAAAGGTTGTACACGGCCACTaGTCTCTTCGTCCTCTGCCCTTGTCTCTTGGACTGTCGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVTLLQLKTKVVHGH*SLRPLPLSLGLSWW Trigger: CCACCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACCAGTGGCCGTGTACAACCTTTGTCTTGAGCTGGAGGAGGGTGACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS CCA 90 bp | TGTCTACAATGGAGGCAGCAGGAGAGAGGGGGAACGGTGACATTCTaGGTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTTGGTGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLQWRQQERGGTVTF*VKEVFQLGWSLVWL Trigger: CAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGTCACCGTTCCCCCTCTCTCCTGCTGCCTCCATTGTAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
||
| CDS GCA 90 bp | AGCTCAAGACAAAGGTTGTACACGGCCACTGGTCTCTTCGTCCTCTaGCCTTGTCTCTTGGACTGTCGTGGTGGAGCGTTTGGGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRQRLYTATGLFVL*PCLLDCRGGAFGGD Trigger: ATCACCCCCAAACGCTCCACCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACCAGTGGCCGTGTACAACCTTTGTCTTGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS CCA 90 bp | ACATTCTGGGTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTTGGTGTaGTTGGAGACTGCATATTTAGCCACTGCACCATGGATGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFWVKEVFQLGWSLV*LETAYLATAPWMAG Trigger: CCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
||
| CDS CCA 90 bp | GGGGGAACGGTGACATTCTGGGTGAAGGAGGTGTTCCAGCTGGGTTaGAGCTTGGTGTGGTTGGAGACTGCATATTTAGCCACTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGTVTFWVKEVFQLG*SLVWLETAYLATAP Trigger: TGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGTCACCGTTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAAGCAGCTGACAGACTTTaGGTGGCAGAGATGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLCFPPGWDFRESRSPPEAADRL*VAEMRF Trigger: GAACCTCATCTCTGCCACCAAAAGTCTGTCAGCTGC...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACGCCATCCGGGTTCCCTaGAGGTCTGAACATCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHAIRVP*RSEHPQ Trigger: TTGAGGATGTTCAGACCTCAAGGGAACCCGGATGGC...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | ACCGCAGATCCTAAGCGTGACCGTGGTGTTTGGGTGCCATTTCCAGGCTGCTGCTGGATTTCCTGGAGCTaGCACACATATTCAAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TADPKRDRGVWVPFPGCCWISWS*HTYSSE Trigger: CTCGCTTGAATATGTGTGCAAGCTCCAGGAAATCCA...GCAGCAGCCTGGAAATGGCACCCAAACACCACGGTCACGCTTAGGATCTGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | GGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTGGGAGAATTAAGCTCAAGACAAAGGTaGTACACGGCCACTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCVDSEVCPLSVPQVGELSSRQR*YTATGL Trigger: GAGACCAGTGGCCGTGTACAACCTTTGTCTTGAGCT...TAATTCTCCCACCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGCAGCTGGGTTGGAGCTaGGTGTGGTTGGAGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTSLKKFLSASLQVGTFEQLGWS*VWLETA Trigger: TGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTG...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS TCA 90 bp | GTCTCAGCATCGCCGATAAACTCGAACTTGAAGTCTCTGAGCGAGTaGGCGAACTTCCTCTGGGCAGCTGACAGACTTTTGGTGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSASPINSNLKSLSE*ANFLWAADRLLVAE Trigger: CTCTGCCACCAAAAGTCTGTCAGCTGCCCAGAGGAAGTTCGCTCACTCGCTCAGAGACTTCAAGTTCGAGTTTATCGGCGATGCTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGTGTGGACAGTGAGGTCTGCCCTCTCTCTGTTCCACAGGTGGGAGAATTAGCAGAGATGAGGTTCTaGCCGTCTTTGATGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCVDSEVCPLSVPQVGELAEMRF*PSLMSS Trigger: AGAGCTCATCAAAGACGGCAAGAACCTCATCTCTGC...TAATTCTCCCACCTGTGGAACAGAGAGAGGGCAGACCTCACTGTCCACACACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTAGGAATCAGCCCTCGCTaGCCGTTCAGGGTCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLGISPR*PFRVPS Trigger: GGAAGGGACCCTGAACGGCAAGCGAGGGCTGATTCC...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS CCA 90 bp | TGGACTGTCGTGGTGGAGCGTTTGGGGGTGATGCTGACAGGCATGTaGGCTCAGCAAATGTGGTATCAGGCGAGGTTCGAAAAATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WTVVVERLGVMLTGM*AQQMWYQARFEKSF Trigger: AAAAGATTTTTCGAACCTCGCCTGATACCACATTTGCTGAGCCCACATGCCTGTCAGCATCACCCCCAAACGCTCCACCACGACAGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS CCA 90 bp | TCCAACATCTCCTTATTCTTCTCTGGCAGTTTGTGTACCAAGAAGTaGATGGCATTAACTCGGGATTCCGGGCTGCCGCTCTTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNISLFFSGSLCTKK*MALTRDSGLPLLAG Trigger: TCCAGCCAAGAGCGGCAGCCCGGAATCCCGAGTTAATGCCATCCACTTCTTGGTACACAAACTGCCAGAGAAGAATAAGGAGATGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGAGTCACGCAGTCCCCCTGAAGAGTCCATGTGCCTTTaGGTGCATTCTTTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLCFPPGWDFRESRSPPEESMCL*VHSFKK Trigger: CTTTTTGAAAGAATGCACCAAAAGGCACATGGACTC...TTCAGGGGGACTGCGTGACTCTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACTCCAGGTCCAGCTCATaGCACATTTTTACATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHSRSSS*HIFTSI Trigger: GATGGATGTAAAAATGTGCAATGAGCTGGACCTGGA...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
||
| CDS CCA 90 bp | AGTCTCTGGACCTTTGAACTCACCCCCACAACTCTGTACAGTCCTTaGTCATTTATACCTCCTTCCGGTCTCGGGACAATGGCTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLWTFELTPTTLYSP*SFIPPSGLGTMALL Trigger: TAACAGAGCCATTGTCCCGAGACCGGAAGGAGGTATAAATGACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210519.2 |
||
| CDS GCA 90 bp | GCTGATGCATTTTCTGAGAATTGTGAATCCCATCTTATCCAGCTGTaGACCTCCTTCCGGTCTCGGGACAATGGCTCTGTTAAACGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ADAFSENCESHLIQL*TSFRSRDNGSVKRV Trigger: CACACGTTTAACAGAGCCATTGTCCCGAGACCGGAAGGAGGTGCACAGCTGGATAAGATGGGATTCACAATTCTCAGAAAATGCATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210922.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTTGTGGCAACAAGGTGACAAAGGACAAACAGCACTCAGGTGAGCACATCATGTTGAATTTCTaGGCTGTTTTCCGGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: EGPCGNKVTKDKQHSGEHIMLNF*AVFRYM Trigger: CATGTACCGGAAAACAGCCAAGAAATTCAACATGAT...GTGCTCACCTGAGTGCTGTTTGTCCTTTGTCACCTTGTTGCCACAAGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CAA 90 bp | GGCACAAGCTTGAAGAAGTTTCTCTCTGCTTCCCTCCAGGTTGGGACTTTCGAGTTCTTCTCTGGCAGTTaGTGTACCAAGAAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTSLKKFLSASLQVGTFEFFSGS*CTKKWM Trigger: CATCCACTTCTTGGTACACAAACTGCCAGAGAAGAA...CTCGAAAGTCCCAACCTGGAGGGAAGCAGAGAGAAACTTCTTCAAGCTTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS-3UTR CAA 90 bp | CTCTGTTCCACAGGTGGGAGAATTAAACATCACAATCAATGCCCAGTCCTGCTAAACTCTGTACAGTCCTaGGTCATTTATACCTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCSTGGRIKHHNQCPVLLNSVQS*VIYTSG Trigger: ACCCGAGGTATAAATGACCAAGGACTGTACAGAGTT...TAGCAGGACTGGGCATTGATTGTGATGTTTAATTCTCCCACCTGTGGAACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076316.6 |
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| CDS TCA 90 bp | GCACATTTTTACATCCATCAACATACTCAGAAGTCTCTGGACCTTTaGACTCACCCCCACAACTCTGTACAGTCCTTGGTCATTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: AHFYIHQHTQKSLDL*THPHNSVQSLVIYT Trigger: GGTATAAATGACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTTCTGAGTATGTTGATGGATGTAAAAATGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 90 bp | AATTCGCCACTGTCATTAGATTCTGCTTCGAGTGACTTGACACGTTaGTTAGATGCTTCACCAAGATATCCAACATCTCCTTATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSPLSLDSASSDLTR*LDASPRYPTSPYSS Trigger: AGAAGAATAAGGAGATGTTGGATATCTTGGTGAAGCATCTAACCAACGTGTCAAGTCACTCGAAGCAGAATCTAATGACAGTGGCGAATT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | GCCACTGCACCATGGATGGCCGGGTCTGGCTTGGCGTaGTGGCGGTGGCATCTCCACAGCTCCCTCCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATAPWMAGSGLA*WRWHLHSSLRL Trigger: CAGACGGAGGGAGCTGTGGAGATGCCACCGCCACCACGCCAAGCCAGACCCGGCCATCCATGGTGCAGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CCA 72 bp | CCATGGATGGCCGGGTCTGGCTTGGCGTGGTGGCGGTaGCATCTCCACAGCTCCCTCCGTCTGCTGCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWMAGSGLAWWR*HLHSSLRLLLG Trigger: ACCTAGCAGCAGACGGAGGGAGCTGTGGAGATGCCACCGCCACCACGCCAAGCCAGACCCGGCCATCCATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CCA 72 bp | ACTGCACCATGGATGGCCGGGTCTGGCTTGGCGTGGTaGCGGTGGCATCTCCACAGCTCCCTCCGTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAPWMAGSGLAW*RWHLHSSLRLL Trigger: CAGCAGACGGAGGGAGCTGTGGAGATGCCACCGCCACCACGCCAAGCCAGACCCGGCCATCCATGGTGCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CCA 72 bp | GTGGCATCTCCACAGCTCCCTCCGTCTGCTGCTAGGTaGTTTCCGTCTAGTCCAGGAGGCCCATGGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VASPQLPPSAAR*FPSSPGGPWAA Trigger: AGCTGCCCATGGGCCTCCTGGACTAGACGGAAACCACCTAGCAGCAGACGGAGGGAGCTGTGGAGATGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | GCTGCTAGGTGGTTTCCGTCTAGTCCAGGAGGCCCATaGGCAGCTGACGTTGTGGGAGATGGGGTGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AARWFPSSPGGP*AADVVGDGVER Trigger: TCTCTCCACCCCATCTCCCACAACGTCAGCTGCCCATGGGCCTCCTGGACTAGACGGAAACCACCTAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | TGGAGGCAGCAGGAGAGAGGGGGAACGGTGACATTCTaGGTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WRQQERGGTVTF*VKEVFQLGWSL Trigger: CAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGTCACCGTTCCCCCTCTCTCCTGCTGCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 72 bp | GTTGTACACGGCCACTGGTCTCTTCGTCCTCTGCCCTaGTCTCTTGGACTGTCGTGGTGGAGCGTTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVHGHWSLRPLP*SLGLSWWSVWG Trigger: CCCCCAAACGCTCCACCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACCAGTGGCCGTGTACAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 90 bp | GAGCTGTGTTCTGCTTCACACGGGTACACTGCCCGAGCCTTTCGATaGATAACGGTGGTGGCGGTGGCATCTCCACAGCTCCCTCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELCSASHGYTARAFR*ITVVAVASPQLPPS Trigger: AGACGGAGGGAGCTGTGGAGATGCCACCGCCACCACCGTTATCAATCGAAAGGCTCGGGCAGTGTACCCGTGTGAAGCAGAACACAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210922.2 |
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| CDS CAA 90 bp | AGGTTGTACACGGCCACTGGTCTCTTCGTCCTCTGCCCTTGTCTCTaGGACTGTCGTGGTGGAGCGTTTGGGGGTGATGCTGACAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RLYTATGLFVLCPCL*DCRGGAFGGDADRH Trigger: ATGCCTGTCAGCATCACCCCCAAACGCTCCACCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACCAGTGGCCGTGTACAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS GCA 72 bp | GAGCTTGGTGTGGTTGGAGACTGCATATTTAGCCACTaGACCATGGATGGCCGGGTCTGGCTTGGCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ELGVVGDCIFSH*TMDGRVWLGVV Trigger: CACCACGCCAAGCCAGACCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 72 bp | TCTGCTTCACACGGGTACACTGCCCGAGCCTTTCGATaGATAACGGTGGTGGCGGTGGCATCTCCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SASHGYTARAFR*ITVVAVASPQL Trigger: GAGCTGTGGAGATGCCACCGCCACCACCGTTATCAATCGAAAGGCTCGGGCAGTGTACCCGTGTGAAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210922.2 |
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| CDS TCA 72 bp | GTTCTGCTCCACTTGGAGGTCGGCCTCCTGCAAGTGTaGGTCCTTCTTCCTGGCAGACAGCGTCAAGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLLHLEVGLLQV*VLLPGRQRQVL Trigger: AAGCACTTGACGCTGTCTGCCAGGAAGAAGGACTCACACTTGCAGGAGGCCGACCTCCAAGTGGAGCAGAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS GCA 72 bp | GTTCCAGCTGGGTTGGAGCTTGGTGTGGTTGGAGACTaGATATTTAGCCACTGCACCATGGATGGCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPAGLELGVVGD*IFSHCTMDGRV Trigger: GACCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CCA 72 bp | GTGGTGGAGCGTTTGGGGGTGATGCTGACAGGCATGTaGGCTCAGCAAATGTGGTATCAGGCGAGGTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVERLGVMLTGM*AQQMWYQARFE Trigger: TTCGAACCTCGCCTGATACCACATTTGCTGAGCCCACATGCCTGTCAGCATCACCCCCAAACGCTCCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 72 bp | GCCCGAGCCTTTCGATTGATAACGCACTCAGGCAGCTaGTCTACAATGGAGGCAGCAGGAGAGAGGGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ARAFRLITHSGS*STMEAAGERGN Trigger: GTTCCCCCTCTCTCCTGCTGCCTCCATTGTAGACAAGCTGCCTGAGTGCGTTATCAATCGAAAGGCTCGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 90 bp | TCTTCGTCCTCTGCCCTTGTCTCTTGGACTGTCGTGGTGGAGCGTTaGGGGGTGATGCTGACAGGCATGTGGGCTCAGCAAATGTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSALVSWTVVVER*GVMLTGMWAQQMWY Trigger: ATACCACATTTGCTGAGCCCACATGCCTGTCAGCATCACCCCCAAACGCTCCACCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 90 bp | TTCTGGGTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTTGGTGTGGTaGGAGACTGCATATTTAGCCACTGCACCATGGATGGCCGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FWVKEVFQLGWSLVW*ETAYLATAPWMAGS Trigger: AGACCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 90 bp | AGGGGGAACGGTGACATTCTGGGTGAAGGAGGTGTTCCAGCTGGGTaGGAGCTTGGTGTGGTTGGAGACTGCATATTTAGCCACTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RGNGDILGEGGVPAG*ELGVVGDCIFSHCT Trigger: GGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGTCACCGTTCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 90 bp | GGGTACACTGCCCGAGCCTTTCGATTGATAACGCACTCAGGCAGCTaGTCTACAATGGAGGCAGCAGGAGAGAGGGGGAACGGTGACATT | + |
|
Preference number: 6 (lower is better) Translates to: GYTARAFRLITHSGS*STMEAAGERGNGDI Trigger: AATGTCACCGTTCCCCCTCTCTCCTGCTGCCTCCATTGTAGACAAGCTGCCTGAGTGCGTTATCAATCGAAAGGCTCGGGCAGTGTACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS GCA 72 bp | CAAAGGTTGTACACGGCCACTGGTCTCTTCGTCCTCTaGCCTTGTCTCTTGGACTGTCGTGGTGGAGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QRLYTATGLFVL*PCLLDCRGGAF Trigger: AAACGCTCCACCACGACAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACCAGTGGCCGTGTACAACCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS GCA 72 bp | CAATTCCGAGCTGTGTTCTGCTTCACACGGGTACACTaGCCGAGCCTTTCGATTGATAACGGTGGTGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QFRAVFCFTRVH*PSLSIDNGGGG Trigger: ACCGCCACCACCGTTATCAATCGAAAGGCTCGGGCAGTGTACCCGTGTGAAGCAGAACACAGCTCGGAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210922.2 |
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| CDS CCA 72 bp | CTCCTCCAGCTCAAGACAAAGGTTGTACACGGCCACTaGTCTCTTCGTCCTCTGCCCTTGTCTCTTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLKTKVVHGH*SLRPLPLSLGL Trigger: CAGTCCAAGAGACAAGGGCAGAGGACGAAGAGACCAGTGGCCGTGTACAACCTTTGTCTTGAGCTGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 90 bp | GAGCTGTGTTCTGCTTCACACGGGTACACTGCCCGAGCCTTTCGATaGATAACGCACTCAGGCAGCTTGTCTACAATGGAGGCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ELCSASHGYTARAFR*ITHSGSLSTMEAAG Trigger: TCCTGCTGCCTCCATTGTAGACAAGCTGCCTGAGTGCGTTATCAATCGAAAGGCTCGGGCAGTGTACCCGTGTGAAGCAGAACACAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS TCA 72 bp | GCCGTTCAGGGTCCCTTCCAGCCATCCGGGTTCCCTTaGGGTCTGAACATCCTCAAAAATGGCTCCTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVQGPFQPSGFP*GLNILKNGSYF Trigger: GAAATAGGAGCCATTTTTGAGGATGTTCAGACCTCAAGGGAACCCGGATGGCTGGAAGGGACCCTGAACGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS GCA 72 bp | CAATTCCGAGCTGTGTTCTGCTTCACACGGGTACACTaGCCGAGCCTTTCGATTGATAACGCACTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QFRAVFCFTRVH*PSLSIDNALRQ Trigger: CTGCCTGAGTGCGTTATCAATCGAAAGGCTCGGGCAGTGTACCCGTGTGAAGCAGAACACAGCTCGGAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CCA 72 bp | GTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTTGGTGTaGTTGGAGACTGCATATTTAGCCACTGCACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: VKEVFQLGWSLV*LETAYLATAPW Trigger: CCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 90 bp | ACGGTGACATTCTGGGTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTaGGTGTGGTTGGAGACTGCATATTTAGCCACTGCACCATGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TVTFWVKEVFQLGWS*VWLETAYLATAPWM Trigger: CATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGTCACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CCA 72 bp | CCTTCCGGTCTCGGGACAATGGCTCTGTTAAACGTGTaGAACAGAGCTTCTTTTCCACCCAGAGCTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGLGTMALLNV*NRASFPPRASN Trigger: GTTGGAAGCTCTGGGTGGAAAAGAAGCTCTGTTCCACACGTTTAACAGAGCCATTGTCCCGAGACCGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 72 bp | AAGGAGGTGTTCCAGCTGGGTTGGAGCTTGGTGTGGTaGGAGACTGCATATTTAGCCACTGCACCATGGATG | + |
|
Preference number: 6 (lower is better) Translates to: KEVFQLGWSLVW*ETAYLATAPWM Trigger: CATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 72 bp | TTCTGGGTGAAGGAGGTGTTCCAGCTGGGTTGGAGCTaGGTGTGGTTGGAGACTGCATATTTAGCCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FWVKEVFQLGWS*VWLETAYLATA Trigger: TGCAGTGGCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 72 bp | GGTGACATTCTGGGTGAAGGAGGTGTTCCAGCTGGGTaGGAGCTTGGTGTGGTTGGAGACTGCATATTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GDILGEGGVPAG*ELGVVGDCIFS Trigger: GCTAAATATGCAGTCTCCAACCACACCAAGCTCCAACCCAGCTGGAACACCTCCTTCACCCAGAATGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 72 bp | TCTGCTTCACACGGGTACACTGCCCGAGCCTTTCGATaGATAACGCACTCAGGCAGCTTGTCTACAATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SASHGYTARAFR*ITHSGSLSTME Trigger: CTCCATTGTAGACAAGCTGCCTGAGTGCGTTATCAATCGAAAGGCTCGGGCAGTGTACCCGTGTGAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 |
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| CDS CAA 72 bp | TGCCGTTCAGGGTCCCTTCCAGCCATCCGGGTTCCCTaGAGGTCTGAACATCCTCAAAAATGGCTCCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: CRSGSLPAIRVP*RSEHPQKWLLF Trigger: AAATAGGAGCCATTTTTGAGGATGTTCAGACCTCAAGGGAACCCGGATGGCTGGAAGGGACCCTGAACGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS TCA 72 bp | TCGCCGATAAACTCGAACTTGAAGTCTCTGAGCGAGTaGGCGAACTTCCTCTGGGCAGCTGACAGACTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPINSNLKSLSE*ANFLWAADRLL Trigger: CAAAAGTCTGTCAGCTGCCCAGAGGAAGTTCGCTCACTCGCTCAGAGACTTCAAGTTCGAGTTTATCGGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | TCCTTATTCTTCTCTGGCAGTTTGTGTACCAAGAAGTaGATGGCATTAACTCGGGATTCCGGGCTGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLFFSGSLCTKK*MALTRDSGLPL Trigger: GAGCGGCAGCCCGGAATCCCGAGTTAATGCCATCCACTTCTTGGTACACAAACTGCCAGAGAAGAATAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS TCA 72 bp | AGGGTCCCTTCCAGCCATCCGGGTTCCCTTGAGGTCTaGACATCCTCAAAAATGGCTCCTATTTCAAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: RVPSSHPGSLEV*TSSKMAPISND Trigger: GTCATTTGAAATAGGAGCCATTTTTGAGGATGTTCAGACCTCAAGGGAACCCGGATGGCTGGAAGGGACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | ACCTTTGAACTCACCCCCACAACTCTGTACAGTCCTTaGTCATTTATACCTCGGGTTTCAACGGCGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TFELTPTTLYSP*SFIPRVSTALM Trigger: CATCAGCGCCGTTGAAACCCGAGGTATAAATGACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | ACCTTTGAACTCACCCCCACAACTCTGTACAGTCCTTaGTCATTTATACCTCCTTCCGGTCTCGGGACAATG | + |
|
Preference number: 6 (lower is better) Translates to: TFELTPTTLYSP*SFIPPSGLGTM Trigger: CATTGTCCCGAGACCGGAAGGAGGTATAAATGACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210519.2 |
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| CDS GCA 72 bp | TTTTCTGAGAATTGTGAATCCCATCTTATCCAGCTGTaGACCTCCTTCCGGTCTCGGGACAATGGCTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FSENCESHLIQL*TSFRSRDNGSV Trigger: AACAGAGCCATTGTCCCGAGACCGGAAGGAGGTGCACAGCTGGATAAGATGGGATTCACAATTCTCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076316.6 ENSMUST00000210922.2 |
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| CDS CAA 90 bp | TGCTTCACCAAGATATCCAACATCTCCTTATTCTTCTCTGGCAGTTaGTGTACCAAGAAGTGGATGGCATTAACTCGGGATTCCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CFTKISNISLFFSGS*CTKKWMALTRDSGL Trigger: CAGCCCGGAATCCCGAGTTAATGCCATCCACTTCTTGGTACACAAACTGCCAGAGAAGAATAAGGAGATGTTGGATATCTTGGTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS TCA 72 bp | ATTTCTTGGCTGTTTTCCGGTACATGCAGTAGTGTTTaGCCCAACTGGACCCAAATGGAGCAGGCCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISWLFSGTCSSV*PNWTQMEQAFS Trigger: AGAAAAGGCCTGCTCCATTTGGGTCCAGTTGGGTCAAACACTACTGCATGTACCGGAAAACAGCCAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS TCA 72 bp | TACATCCATCAACATACTCAGAAGTCTCTGGACCTTTaGACTCACCCCCACAACTCTGTACAGTCCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: YIHQHTQKSLDL*THPHNSVQSLV Trigger: GACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTTCTGAGTATGTTGATGGATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 90 bp | CCACCCCTAAATTCGCCACTGTCATTAGATTCTGCTTCGAGTGACTaGACACGTTGGTTAGATGCTTCACCAAGATATCCAACATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPLNSPLSLDSASSD*TRWLDASPRYPTSP Trigger: AGGAGATGTTGGATATCTTGGTGAAGCATCTAACCAACGTGTCAAGTCACTCGAAGCAGAATCTAATGACAGTGGCGAATTTAGGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 72 bp | CCTTCTGCTGTGAACTGGCTGGCTCGCTTCTGGTCCTaGGGATTTTGTCTAATTTTATTCATAAGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSAVNWLARFWS*GFCLILFISSS Trigger: GGAGGAACTTATGAATAAAATTAGACAAAATCCCAAGGACCAGAAGCGAGCCAGCCAGTTCACAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 72 bp | TTACATCCATCAACATACTCAGAAGTCTCTGGACCTTaGAACTCACCCCCACAACTCTGTACAGTCCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LHPSTYSEVSGP*NSPPQLCTVLG Trigger: ACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTTCTGAGTATGTTGATGGATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS GCA 72 bp | CTTCCCAATCTGCAGAATTCTCCAGGTCCAGCTCATTaGACATTTTTACATCCATCAACATACTCAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPNLQNSPGPAH*TFLHPSTYSEV Trigger: GACTTCTGAGTATGTTGATGGATGTAAAAATGTGCAATGAGCTGGACCTGGAGAATTCTGCAGATTGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CCA 72 bp | CTGTCATTAGATTCTGCTTCGAGTGACTTGACACGTTaGTTAGATGCTTCACCAAGATATCCAACATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSLDSASSDLTR*LDASPRYPTSP Trigger: AGGAGATGTTGGATATCTTGGTGAAGCATCTAACCAACGTGTCAAGTCACTCGAAGCAGAATCTAATGACAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 72 bp | AATTCGCCACTGTCATTAGATTCTGCTTCGAGTGACTaGACACGTTGGTTAGATGCTTCACCAAGATATCCA | + |
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Preference number: 6 (lower is better) Translates to: NSPLSLDSASSD*TRWLDASPRYP Trigger: TGGATATCTTGGTGAAGCATCTAACCAACGTGTCAAGTCACTCGAAGCAGAATCTAATGACAGTGGCGAATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 90 bp | TGCACATTTTTACATCCATCAACATACTCAGAAGTCTCTGGACCTTaGAACTCACCCCCACAACTCTGTACAGTCCTTGGTCATTTATAC | + |
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Preference number: 6 (lower is better) Translates to: CTFLHPSTYSEVSGP*NSPPQLCTVLGHLY Trigger: GTATAAATGACCAAGGACTGTACAGAGTTGTGGGGGTGAGTTCAAAGGTCCAGAGACTTCTGAGTATGTTGATGGATGTAAAAATGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS CAA 72 bp | AAGATATCCAACATCTCCTTATTCTTCTCTGGCAGTTaGTGTACCAAGAAGTGGATGGCATTAACTCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: KISNISLFFSGS*CTKKWMALTRD Trigger: ATCCCGAGTTAATGCCATCCACTTCTTGGTACACAAACTGCCAGAGAAGAATAAGGAGATGTTGGATATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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| CDS TCA 72 bp | ATTTTGTCTAATTTTATTCATAAGTTCCTCCACTTCTaGTCTGGTTCCCTCAAATCGATTCCGTGTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: ILSNFIHKFLHF*SGSLKSIPCIL Trigger: CAGAATACACGGAATCGATTTGAGGGAACCAGATCAGAAGTGGAGGAACTTATGAATAAAATTAGACAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076316.6 ENSMUST00000210519.2 ENSMUST00000210922.2 |
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