Pregenerated sensors for ARHGAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027247Ensembl transcript IDs: ENSMUST00000090614.11, ENSMUST00000111329.8, ENSMUST00000111330.3, ENSMUST00000111331.9
Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAAGTaGCAGGCCAACTCTGGTCTTATCATCCCTATTAGCAGGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: WGQYHLGKNRPRRQK*QANSGLIIPISREG Trigger: GCCCTCCCTGCTAATAGGGATGATAAGACCAGAGTTGGCCTGTCACTTCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR GCA 90 bp | ACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTaGAAGAAAGAGCCAGTGAGGTCAGGCCCAGCCTCAGCTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: TDSSTCGTRDLLQQW*KKEPVRSGPASAAR Trigger: TCTTGCAGCTGAGGCTGGGCCTGACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR CCA 90 bp | CCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTaGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PIITGAQLSERQEAL*PPHSPKEAARTYPA Trigger: TGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR GCA 90 bp | ACAGTGGTGCAAGAAAGAGCCAGTGAGGTCAGGCCCAGCCTCAGCTaGAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: TVVQERASEVRPSLS*KIISTDLMVASTTS Trigger: AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCTGGGCCTGACCTCACTGGCTCTTTCTTGCACCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR TCA 90 bp | GATCAAAATGACTCCACACCTGAAAGACCTACTATAGCCTTTGGCTaGAGATCTGTGCACATGAGAATGAATGGAGGGCCAGGACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: DQNDSTPERPTIAFG*RSVHMRMNGGPGLL Trigger: CAGCAGTCCTGGCCCTCCATTCATTCTCATGTGCACAGATCTTCAGCCAAAGGCTATAGTAGGTCTTTCAGGTGTGGAGTCATTTTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR TCA 90 bp | GCAGTGGACTTCGGGAAGAGTCACAAGGCTTCATTAGGAATAGAATaGAAGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAA | + |
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Preference number: 1 (lower is better) Translates to: AVDFGKSHKASLGIE*KLPIITGAQLSERQ Trigger: TTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCTTTCATTCTATTCCTAATGAAGCCTTGTGACTCTTCCCGAAGTCCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGAGGGACAGGAGGGGCTaGCCAGTTAGTAGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LWPPHSPKEAARTYPAGVRDRRG*PVSRLQ Trigger: TTGGAGCCTACTAACTGGGCAGCCCCTCCTGTCCCT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTAGGGACAGGAGGGGCTaGCCAGTTAGTAGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GWGLTAALVAPETCYNSGRDRRG*PVSRLQ Trigger: TTGGAGCCTACTAACTGGGCAGCCCCTCCTGTCCCT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGAGGGACAGGAGGGGCTaGCCAGTTAGTAGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQRDRRG*PVSRLQ Trigger: TTGGAGCCTACTAACTGGGCAGCCCCTCCTGTCCCT...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGCAGGCACAGGGAACTTaGACCCAGGCCAATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LWPPHSPKEAARTYPAGVQAQGT*TQANAH Trigger: GTGAGCATTGGCCTGGGTGCAAGTTCCCTGTGCCTG...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGCAGGCACAGGGAACTTaGACCCAGGCCAATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQQAQGT*TQANAH Trigger: GTGAGCATTGGCCTGGGTGCAAGTTCCCTGTGCCTG...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGGGGGGCAGTACCACTTaGGGAAGAACAGACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LWPPHSPKEAARTYPAGVGGSTT*GRTDPG Trigger: TCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCC...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGGGGGGCAGTACCACTTaGGGAAGAACAGACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQGGSTT*GRTDPG Trigger: TCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCC...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCACCCAGGAGGCAGAAGTaGCAGGCCAACTCTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QEALWPPHSPKEAARTYPPRRQK*QANSGL Trigger: AAGACCAGAGTTGGCCTGTCACTTCTGCCTCCTGGG...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGGGCTTCTGAGTTTCTaGCTCTCCGAGAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QEALWPPHSPKEAARTYPGLLSF*LSESPQ Trigger: CTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCC...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCGGGCTTCTGAGTTTCTaGCTCTCCGAGAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LWHQRPATTVVQERASEVGLLSF*LSESPQ Trigger: CTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCC...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTAGTCTTCAGGGCTTCTaGGTTTCTGACTCTCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: GWGLTAALVAPETCYNSGSLQGF*VSDSPR Trigger: TCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGGCACATGAGAATGAATaGAGGGCCAGGACTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: LWPPHSPKEAARTYPAGVAHENE*RARTAV Trigger: TACAGCAGTCCTGGCCCTCCATTCATTCTCATGTGC...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGGCACATGAGAATGAATaGAGGGCCAGGACTGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQAHENE*RARTAV Trigger: TACAGCAGTCCTGGCCCTCCATTCATTCTCATGTGC...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTCAAGTGTGGCAGAAATaGGGGAATAGTACACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GWGLTAALVAPETCYNSGQVWQK*GNSTLW Trigger: CCAGAGTGTACTATTCCCTCATTTCTGCCACACTTG...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTGGGCTTCTGAGTTTCTaGCTCTCCGAGAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SLSCKIISTDLMVASTTSGLLSF*LSESPQ Trigger: CTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCC...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCAGGGACAGGAGGGGCTaGCCAGTTAGTAGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: VKALSVFRASEFLTLRESRDRRG*PVSRLQ Trigger: TTGGAGCCTACTAACTGGGCAGCCCCTCCTGTCCCT...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTTTGCACCCAGGCCAATaGTCACTTCCTAGCAATCAG | + |
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Preference number: 2 (lower is better) Translates to: ALSVFRASEFLTLRESPGLHPGQ*SLPSNQ Trigger: CTGATTGCTAGGAAGTGAGCATTGGCCTGGGTGCAA...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCAGGCACAGGGAACTTaGACCCAGGCCAATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VKALSVFRASEFLTLRESQAQGT*TQANAH Trigger: GTGAGCATTGGCCTGGGTGCAAGTTCCCTGTGCCTG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTCACTACGGCTCTCCCTaGGAGTGGACAGGACCATTT | + |
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Preference number: 2 (lower is better) Translates to: SLSCKIISTDLMVASTTSHYGSP*EWTGPF Trigger: AAATGGTCCTGTCCACTCCCAGGGAGAGCCGTAGTG...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGAAAGTGAGAGACATTaGTATCTCTGGCTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: GWGLTAALVAPETCYNSGESERH*YLWLEQ Trigger: CTGTTCTAGCCAGAGATACCAATGTCTCTCACTTTC...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGGAAAGTGAGAGACATTaGTATCTCTGGCTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LWPPHSPKEAARTYPAGVESERH*YLWLEQ Trigger: CTGTTCTAGCCAGAGATACCAATGTCTCTCACTTTC...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCTCCCCAGGTAGAAAGTaGGAGACATTGGTATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGSPGRK*ETLVSL Trigger: CAGAGATACCAATGTCTCTCACTTTCTACCTGGGGA...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTGTAGGGCAAGGTCACTaGAGGTACCTCCCTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: SLSCKIISTDLMVASTTSVGQGH*RYLPVI Trigger: AATGACAGGGAGGTACCTGCAGTGACCTTGCCCTAC...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGGAAAAGGTTTACTGTaGCTAAATCCTAGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: GWGLTAALVAPETCYNSGGKGLL*LNPRRT Trigger: GGTTCTTCTAGGATTTAGCCACAGTAAACCTTTTCC...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAAGACATTGGTATCTCTaGCTAGAACAGGGATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QEALWPPHSPKEAARTYPRHWYL*LEQGSK Trigger: TTTTGATCCCTGTTCTAGCCAGAGATACCAATGTCT...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGGGAAAAGGTTTACTGTaGCTAAATCCTAGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: CSLPSNQEREDQPQLPAQGKGLL*LNPRRT Trigger: GGTTCTTCTAGGATTTAGCCACAGTAAACCTTTTCC...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGACACTACGGCTCTCCCTaGGAGTGGACAGGACCATTT | + |
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Preference number: 2 (lower is better) Translates to: LLVKALSVFRASEFLTLRHYGSP*EWTGPF Trigger: AAATGGTCCTGTCCACTCCCAGGGAGAGCCGTAGTG...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCGAAAGTGAGAGACATTaGTATCTCTGGCTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LWHQRPATTVVQERASEVESERH*YLWLEQ Trigger: CTGTTCTAGCCAGAGATACCAATGTCTCTCACTTTC...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAGCAAGAAAGAGCCAGTaGGGTCAGGCCCAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCEARKSQ*GQAQPQ Trigger: CTGAGGCTGGGCCTGACCTCACTGGCTCTTTCTTGC...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCGGAAAAGGTTTACTGTaGCTAAATCCTAGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGGKGLL*LNPRRT Trigger: GGTTCTTCTAGGATTTAGCCACAGTAAACCTTTTCC...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAACCCAGGAGGCAGAAGTaGCAGGCCAACTCTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCEPRRQK*QANSGL Trigger: AAGACCAGAGTTGGCCTGTCACTTCTGCCTCCTGGG...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAAGACAAGAGGCCCTGTaGCCACCACACTCCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCERQEAL*PPHSPK Trigger: CTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTGTCT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAACACTACGGCTCTCCCTaGGAGTGGACAGGACCATTT | + |
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Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCEHYGSP*EWTGPF Trigger: AAATGGTCCTGTCCACTCCCAGGGAGAGCCGTAGTG...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAGTAGGGCAAGGTCACTaGAGGTACCTCCCTGTCATT | + |
|
Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCEVGQGH*RYLPVI Trigger: AATGACAGGGAGGTACCTGCAGTGACCTTGCCCTAC...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAACTGCTACAACAGTGGTaGAAGAAAGAGCCAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCELLQQW*KKEPVR Trigger: CCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAG...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAATCCCCAGGTAGAAAGTaGGAGACATTGGTATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCESPGRK*ETLVSL Trigger: CAGAGATACCAATGTCTCTCACTTTCTACCTGGGGA...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAAGGCTCCTCAGTAAATaGAGTGTAGCAACACTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCERLLSK*SVATLD Trigger: ATCAAGTGTTGCTACACTCCATTTACTGAGGAGCCT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAAGACATTGGTATCTCTaGCTAGAACAGGGATCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SANGKIHDWCQGNRGKCERHWYL*LEQGSK Trigger: TTTTGATCCCTGTTCTAGCCAGAGATACCAATGTCT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTTGGGGGCAGTACCACTaGGGGAAGAACAGACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GWGLTAALVAPETCYNSGWGQYH*GKNRPR Trigger: CCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCA...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR CCA 72 bp | TCTGGGGCTTCAGGGCCCCTTCCTAGGCAGGAGCCCTaGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SGASGPLPRQEP*TPVRLMPGGQV Trigger: GACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCAGGGCTCCTGCCTAGGAAGGGGCCCTGAAGCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTTGGGGGCAGTACCACTaGGGGAAGAACAGACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALSVFRASEFLTLRESPGWGQYH*GKNRPR Trigger: CCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCA...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR TCA 72 bp | GAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGTaGTGTAGTCTTCTACACTCGCCAGGGAAACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ERTSPSYQHSQQ*CSLLHSPGKQA Trigger: TGCCTGTTTCCCTGGCGAGTGTAGAAGACTACATCACTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR CCA 72 bp | AGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTaGTGCAAGAAAGAGCCAGTGAGGTCAGGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSTCGTRDLLQQ*CKKEPVRSGPA Trigger: GGCTGGGCCTGACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR GCA 72 bp | AGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTaGAAGAAAGAGCCAGTGAGGTCAGGCCCAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: STCGTRDLLQQW*KKEPVRSGPAS Trigger: TGAGGCTGGGCCTGACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR CCA 72 bp | ACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTaGCCACCACACTCCCCTAAGGAAGCTGCTAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: TGAQLSERQEAL*PPHSPKEAART Trigger: GGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTTGGGGGCAGTACCACTaGGGGAAGAACAGACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSCKIISTDLMVASTTSWGQYH*GKNRPR Trigger: CCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCA...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR TCA 72 bp | ACTAGATTCACAGTAAGAGCGTCCCCTGCCACAGACTaGCAGGACCGGGCAGGAGGAAAACAAGAGGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TRFTVRASPATD*QDRAGGKQEVQ Trigger: TTGGACCTCTTGTTTTCCTCCTGCCCGGTCCTGTCAGTCTGTGGCAGGGGACGCTCTTACTGTGAATCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR GCA 72 bp | CAAGAAAGAGCCAGTGAGGTCAGGCCCAGCCTCAGCTaGAAGATCATCAGTACAGATCTCATGGTAGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QERASEVRPSLS*KIISTDLMVAS Trigger: ACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCTGGGCCTGACCTCACTGGCTCTTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR TCA 72 bp | GACTCCACACCTGAAAGACCTACTATAGCCTTTGGCTaGAGATCTGTGCACATGAGAATGAATGGAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DSTPERPTIAFG*RSVHMRMNGGP Trigger: TGGCCCTCCATTCATTCTCATGTGCACAGATCTTCAGCCAAAGGCTATAGTAGGTCTTTCAGGTGTGGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAGCAGGCACAGGGAACTaGCACCCAGGCCAATGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SANGKIHDWCQGNRGKCEAGTGN*HPGQCS Trigger: TGAGCATTGGCCTGGGTGCAAGTTCCCTGTGCCTGC...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| 3UTR TCA 72 bp | TTCGGGAAGAGTCACAAGGCTTCATTAGGAATAGAATaGAAGCTACCAATCATCACTGGGGCTCAGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FGKSHKASLGIE*KLPIITGAQLS Trigger: AGAAAGCTGAGCCCCAGTGATGATTGGTAGCTTTCATTCTATTCCTAATGAAGCCTTGTGACTCTTCCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGGGTCCAGCTGGTGGCTaGGGGGCATCCGGCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQGPAGG*GASGKH Trigger: GTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACC...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGGGGCCGTGGTGGCATaGGCTTGGGAGCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGGAVVA*AWELLQ Trigger: CTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCC...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTGGTCCAGCTGGTGGCTaGGGGGCATCCGGCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGGPAGG*GASGKH Trigger: GTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACC...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGCGAGGGATCCCCAACTaGTCCAGCTTCACGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQRGIPN*SSFTCS Trigger: CGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCG...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCGGTCCAGCTGGTGGCTaGGGGGCATCCGGCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVGPAGG*GASGKH Trigger: GTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACC...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGGGGGCCGTGGTGGCATaGGCTTGGGAGCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEGAVVA*AWELLQ Trigger: CTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCC...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCACATCCGGCTCCGAGATaGGAATGGGAACCGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPHPAPR*EWEPPP Trigger: AGGGGGCGGTTCCCATTCCCATCTCGGAGCCGGATG...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCACATCCCGTAGCCAGCTaGGGGAGGGCTTGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPHPVAS*GRACCH Trigger: GTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATG...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGAGGCGACGGTCTCCCTaGGGACAATGGGAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQRRRSP*GQWEWG Trigger: ACCCCATTCCCATTGTCCTCAGGGAGACCGTCGCCT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGCTCCAGCTTCACGTaGTCGCTCAGCTCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQCSSFT*SLSSLR Trigger: CCTGAGTGAGCTGAGCGAGCACGTGAAGCTGGAGCA...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCGGGGCCGTGGTGGCATaGGCTTGGGAGCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGGAVVA*AWELLQ Trigger: CTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCC...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGAATGGGGTCCTGGCCTaGGCTTTTCTCCTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVNGVLA*AFLLEV Trigger: CACCTCCAGGAGAAAAGCCCAGGCCAGGACCCCATT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGATGGGAATGGGGTCCTaGCCTGGGCTTTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVMGMGS*PGLFSW Trigger: CCAGGAGAAAAGCCCAGGCCAGGACCCCATTCCCAT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGGGACAACCTGGGTGTTaGCAGACCTCCGGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVGQPGC*QTSGRC Trigger: GCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCC...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAACTTCCCGGACAACCTaGGTGTTGGCAGACCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGATSRTT*VLADLR Trigger: CCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTCATCCCGTAGCCAGCTaGGGGAGGGCTTGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGHPVAS*GRACCH Trigger: GTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATG...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCACATCCCGTAGCCAGCTaGGGGAGGGCTTGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPHPVAS*GRACCH Trigger: GTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATG...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGAGGCGACGGTCTCCCTaGGGACAATGGGAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLPSNQEREDQPQLPAQRRRSP*GQWEWG Trigger: ACCCCATTCCCATTGTCCTCAGGGAGACCGTCGCCT...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGACGAGGGATCCCCAACTaGTCCAGCTTCACGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRRGIPN*SSFTCS Trigger: CGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCG...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGCAGTGGGCAGATATCTaGACCAGGAAGGCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQQWADI*TRKAVR Trigger: CCTGACTGCCTTCCTGGTGCAGATATCTGCCCACTG...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCGGTCCAGCTGGTGGCTaGGGGGCATCCGGCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESGPAGG*GASGKH Trigger: GTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACC...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTCCTGGGCTTTTCTCCTaGAGGTGCTGTAAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGPGLFS*RCCKET Trigger: GGTCTCCTTACAGCACCTCCAGGAGAAAAGCCCAGG...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAAATGGGGTCCTGGCCTaGGCTTTTCTCCTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPNGVLA*AFLLEV Trigger: CACCTCCAGGAGAAAAGCCCAGGCCAGGACCCCATT...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAATGGGAATGGGGTCCTaGCCTGGGCTTTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAMGMGS*PGLFSW Trigger: CCAGGAGAAAAGCCCAGGCCAGGACCCCATTCCCAT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAACTTCCCGGACAACCTaGGTGTTGGCAGACCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRTSRTT*VLADLR Trigger: CCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGT...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR TCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGGAAGTCATCATACTTaGGCACTTGGCGAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGGSHHT*ALGEGS Trigger: GGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCC...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGAGATGCCCTCAGTGGTaGGAGCGTGAGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPERCPQW*EREPAS Trigger: ACTTGCAGGCTCACGCTCTCACCACTGAGGGCATCT...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR TCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTAGATGCCCTCAGTGGTaGGAGCGTGAGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGRCPQW*EREPAS Trigger: ACTTGCAGGCTCACGCTCTCACCACTGAGGGCATCT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGAATACCCCAAGAGCTTaGTGTGGTCCAGCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQNTPRA*CGPAGG Trigger: GCCACCAGCTGGACCACAGCAAGCTCTTGGGGTATT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTTGCTCCAGCTTCACGTaGTCGCTCAGCTCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGCSSFT*SLSSLR Trigger: CCTGAGTGAGCTGAGCGAGCACGTGAAGCTGGAGCA...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGGGGCTTGGGAGCTGTTaGAGGGCTTTTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQGLGSC*RAFLCG Trigger: TCCACACAGAAAAGCCCTGCAACAGCTCCCAAGCCC...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTATGACAGCGGGCAAGTaGAGCTCGTTGTACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGMTAGK*SSLYWS Trigger: TGACCAGTACAACGAGCTGCACTTGCCCGCTGTCAT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCGGCAATGCTTCCTCTaGCACGCCTGTCAAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CSLPSNQEREDQPQLPAQRQCFL*HACQSS Trigger: CGAGCTTTGACAGGCGTGGCAGAGGAAGCATTGCCG...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGGGTTCAGAGCTTGGCTaGTGTCATCCAGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQGSELG*CHPASG Trigger: ACCTGACGCTGGATGACACCAGCCAAGCTCTGAACC...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGAGGCCAGCTTCAACTaGTTCAGAGCTTGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPEASFN*FRAWLV Trigger: CACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTC...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGAGGGCTTGTTGTCACTaGTCAGGCCATGGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQRACCH*SGHGAG Trigger: ACCTGCACCATGGCCTGACCAGTGACAACAAGCCCT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTCATACTTGAGCACTTaGCGAGGGATCCCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQSYLST*RGIPNC Trigger: GCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGA...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAGTGGTGGCATGGGCTTaGGAGCTGTTGCAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRVVAWA*ELLQGF Trigger: AAAGCCCTGCAACAGCTCCCAAGCCCATGCCACCAC...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTGTGGTGGCATGGGCTTaGGAGCTGTTGCAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGVVAWA*ELLQGF Trigger: AAAGCCCTGCAACAGCTCCCAAGCCCATGCCACCAC...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCACCTGGGCTTTTCTCCTaGAGGTGCTGTAAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAPGLFS*RCCKET Trigger: GGTCTCCTTACAGCACCTCCAGGAGAAAAGCCCAGG...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAAATGGGGTCCTGGCCTaGGCTTTTCTCCTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRNGVLA*AFLLEV Trigger: CACCTCCAGGAGAAAAGCCCAGGCCAGGACCCCATT...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTATGGGAATGGGGTCCTaGCCTGGGCTTTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGMGMGS*PGLFSW Trigger: CCAGGAGAAAAGCCCAGGCCAGGACCCCATTCCCAT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGGGACAACCTGGGTGTTaGCAGACCTCCGGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEGQPGC*QTSGRC Trigger: GCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCC...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAGGACAACCTGGGTGTTaGCAGACCTCCGGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRGQPGC*QTSGRC Trigger: GCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCC...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCACTTCCCGGACAACCTaGGTGTTGGCAGACCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVTSRTT*VLADLR Trigger: CCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR TCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGGAAGTCATCATACTTaGGCACTTGGCGAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPGSHHT*ALGEGS Trigger: GGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCC...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR TCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCAGATGCCCTCAGTGGTaGGAGCGTGAGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGRCPQW*EREPAS Trigger: ACTTGCAGGCTCACGCTCTCACCACTGAGGGCATCT...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTAATACCCCAAGAGCTTaGTGTGGTCCAGCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGNTPRA*CGPAGG Trigger: GCCACCAGCTGGACCACAGCAAGCTCTTGGGGTATT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGGGGCTTGGGAGCTGTTaGAGGGCTTTTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEGLGSC*RAFLCG Trigger: TCCACACAGAAAAGCCCTGCAACAGCTCCCAAGCCC...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGCTTTTCTCCTGGAGGTaGTGTAAGGAGACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVLFSWR*CKETPN Trigger: GTTTGGGGTCTCCTTACAGCACCTCCAGGAGAAAAG...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCAGTGGGCAGATATCTaGACCAGGAAGGCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSLPSNQEREDQPQLPAQQWADI*TRKAVR Trigger: CCTGACTGCCTTCCTGGTGCAGATATCTGCCCACTG...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAAACTGGTTCAGAGCTTaGCTGGTGTCATCCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPNWFRA*LVSSSV Trigger: GACGCTGGATGACACCAGCCAAGCTCTGAACCAGTT...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGCTGGAGAGCTGCTTTTaGAGTCATCTGACTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQLESCF*SHLTWG Trigger: TCCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAG...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAAGGGCTTGTTGTCACTaGTCAGGCCATGGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPRACCH*SGHGAG Trigger: ACCTGCACCATGGCCTGACCAGTGACAACAAGCCCT...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCATCATACTTGAGCACTTaGCGAGGGATCCCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGASYLST*RGIPNC Trigger: GCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGA...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGCCTGGGCTTTTCTCCTaGAGGTGCTGTAAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEPGLFS*RCCKET Trigger: GGTCTCCTTACAGCACCTCCAGGAGAAAAGCCCAGG...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCAATGGGGTCCTGGCCTaGGCTTTTCTCCTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVNGVLA*AFLLEV Trigger: CACCTCCAGGAGAAAAGCCCAGGCCAGGACCCCATT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCGGACAACCTGGGTGTTaGCAGACCTCCGGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVGQPGC*QTSGRC Trigger: GCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCC...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTCCTCTGGCAGAGTTTaGAGAACCTGCTGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQSSGRV*RTCCVT Trigger: AGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGA...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTTCCTCTGGCAGAGTTTaGAGAACCTGCTGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGSSGRV*RTCCVT Trigger: AGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGA...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGTTGTTCTGGTCACAGTaGGCAGATATCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVLFWSQ*ADICTR Trigger: CCTGGTGCAGATATCTGCCCACTGTGACCAGAACAA...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCACCTGGGCATCTGTGCTaGGGAACAATTCCCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAPGHLC*GTIPLD Trigger: ATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGG...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAGCTTTTGGAGTCATCTaGCTTGGGGAAGTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAAFGVI*LGEVWH Trigger: ATGCCAGACTTCCCCAAGTCAGATGACTCCAAAAGC...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTAGGCGACGGTCTCCCTaGGGACAATGGGAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSCKIISTDLMVASTTSRRRSP*GQWEWG Trigger: ACCCCATTCCCATTGTCCTCAGGGAGACCGTCGCCT...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCGAGGGATCCCCAACTaGTCCAGCTTCACGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESRGIPN*SSFTCS Trigger: CGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCGGGCTTGGGAGCTGTTaGAGGGCTTTTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGGLGSC*RAFLCG Trigger: TCCACACAGAAAAGCCCTGCAACAGCTCCCAAGCCC...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCACTTTTCTCCTGGAGGTaGTGTAAGGAGACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPLFSWR*CKETPN Trigger: GTTTGGGGTCTCCTTACAGCACCTCCAGGAGAAAAG...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTATGACAGCGGGCAAGTaGAGCTCGTTGTACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGMTAGK*SSLYWS Trigger: TGACCAGTACAACGAGCTGCACTTGCCCGCTGTCAT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGAGAGTTTGGAGAACCTaGTGTGTCACTTCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVRVWRT*CVTSTL Trigger: GAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCGAGGCCAGCTTCAACTaGTTCAGAGCTTGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVEASFN*FRAWLV Trigger: CACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTC...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGCTGGAGAGCTGCTTTTaGAGTCATCTGACTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQLESCF*SHLTWG Trigger: TCCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAG...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGGTGTGTCACAGGTTCTaGAGAGCTGCTTTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQVCHRF*RAAFGV Trigger: GACTCCAAAAGCAGCTCTCCAGAACCTGTGACACAC...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGTGTGTCACAGGTTCTaGAGAGCTGCTTTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPVCHRF*RAAFGV Trigger: GACTCCAAAAGCAGCTCTCCAGAACCTGTGACACAC...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTTCATACTTGAGCACTTaGCGAGGGATCCCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGSYLST*RGIPNC Trigger: GCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGA...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCACCTGGGCATCTGTGCTaGGGAACAATTCCCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPPGHLC*GTIPLD Trigger: ATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGG...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGGCTTTTGGAGTCATCTaGCTTGGGGAAGTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEAFGVI*LGEVWH Trigger: ATGCCAGACTTCCCCAAGTCAGATGACTCCAAAAGC...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCGGAAGTCATCATACTTaGGCACTTGGCGAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGGSHHT*ALGEGS Trigger: GGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCC...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCACAGGTTCTGGAGAGCTaGTTTTGGAGTCATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QEALWPPHSPKEAARTYPQVLES*FWSHLT Trigger: AGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTG...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCTGCTCCAGCTTCACGTaGTCGCTCAGCTCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESCSSFT*SLSSLR Trigger: CCTGAGTGAGCTGAGCGAGCACGTGAAGCTGGAGCA...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCACTTTTCTCCTGGAGGTaGTGTAAGGAGACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPLFSWR*CKETPN Trigger: GTTTGGGGTCTCCTTACAGCACCTCCAGGAGAAAAG...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTATATTGTATTTCTGCTaGACTTCCCGGACAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGILYFC*TSRTTW Trigger: CCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATAT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCACCCATATTGTATTTCTaGTGCACTTCCCGGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAPILYF*CTSRTT Trigger: GGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGG...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCATGACAGCGGGCAAGTaGAGCTCGTTGTACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVMTAGK*SSLYWS Trigger: TGACCAGTACAACGAGCTGCACTTGCCCGCTGTCAT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGAGAGTTTGGAGAACCTaGTGTGTCACTTCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQRVWRT*CVTSTL Trigger: GAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGAGTTCTTCTCATCAATaGAGGCCAGCTTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVSSSHQ*RPASTG Trigger: ACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTAGTTCTTCTCATCAATaGAGGCCAGCTTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWGLTAALVAPETCYNSGSSSHQ*RPASTG Trigger: ACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGCTGGAGAGCTGCTTTTaGAGTCATCTGACTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPELESCF*SHLTWG Trigger: TCCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAG...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTCTGGAGAGCTGCTTTTaGAGTCATCTGACTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGLESCF*SHLTWG Trigger: TCCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAG...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAGTGTGTCACAGGTTCTaGAGAGCTGCTTTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRVCHRF*RAAFGV Trigger: GACTCCAAAAGCAGCTCTCCAGAACCTGTGACACAC...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCTCATACTTGAGCACTTaGCGAGGGATCCCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGSYLST*RGIPNC Trigger: GCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGA...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCGTGGTGGCATGGGCTTaGGAGCTGTTGCAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESVVAWA*ELLQGF Trigger: AAAGCCCTGCAACAGCTCCCAAGCCCATGCCACCAC...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGGGGCCGTGGTGGCATaGGCTTGGGAGCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRGAVVA*AWELLQ Trigger: CTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCC...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGTTGTTCTGGTCACAGTaGGCAGATATCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSLPSNQEREDQPQLPAQLFWSQ*ADICTR Trigger: CCTGGTGCAGATATCTGCCCACTGTGACCAGAACAA...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCCCTGGGCATCTGTGCTaGGGAACAATTCCCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGPGHLC*GTIPLD Trigger: ATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGG...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGCGATGTACAGAGCCTTaGTGTTCTTCTTGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQRCTEP*CSSCTC Trigger: GCAAGTACAAGAAGAACATCAAGGCTCTGTACATCG...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGACAGGTTCTGGAGAGCTaGTTTTGGAGTCATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRQVLES*FWSHLT Trigger: AGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTG...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAATGAACATGGTTGGGTaGACGATGTACAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPMNMVG*TMYRAL Trigger: CAAGGCTCTGTACATCGTGCACCCAACCATGTTCAT...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTATGAACATGGTTGGGTaGACGATGTACAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVFRASEFLTLRESPGMNMVG*TMYRAL Trigger: CAAGGCTCTGTACATCGTGCACCCAACCATGTTCAT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGATGAACATGGTTGGGTaGACGATGTACAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLPSNQEREDQPQLPAQMNMVG*TMYRAL Trigger: CAAGGCTCTGTACATCGTGCACCCAACCATGTTCAT...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCCTTTTCTCCTGGAGGTaGTGTAAGGAGACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGLFSWR*CKETPN Trigger: GTTTGGGGTCTCCTTACAGCACCTCCAGGAGAAAAG...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAATATTGTATTTCTGCTaGACTTCCCGGACAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAILYFC*TSRTTW Trigger: CCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATAT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGAGAGTTTGGAGAACCTaGTGTGTCACTTCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLPSNQEREDQPQLPAQRVWRT*CVTSTL Trigger: GAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCT...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTGGTTCAGAGCTTGGCTaGTGTCATCCAGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSCKIISTDLMVASTTSGSELG*CHPASG Trigger: ACCTGACGCTGGATGACACCAGCCAAGCTCTGAACC...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCGGTTCAGAGCTTGGCTaGTGTCATCCAGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESGSELG*CHPASG Trigger: ACCTGACGCTGGATGACACCAGCCAAGCTCTGAACC...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCATTTGATGAACATGGTTaGGTGCACGATGTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGLTAALVAPETCYNSGAFDEHG*VHDVQS Trigger: GCTCTGTACATCGTGCACCCAACCATGTTCATCAAA...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGTTTGATGAACATGGTTaGGTGCACGATGTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQFDEHG*VHDVQS Trigger: GCTCTGTACATCGTGCACCCAACCATGTTCATCAAA...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCTCCTCTGGCAGAGTTTaGAGAACCTGCTGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGSSGRV*RTCCVT Trigger: AGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGA...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGTTGGTCATCTTGTTCTaGTCACAGTGGGCAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: FLAIRKERTSPSYQHSQQLVILF*SQWADI Trigger: GATATCTGCCCACTGTGACCAGAACAAGATGACCAA...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGACGATGTACAGAGCCTTaGTGTTCTTCTTGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRRCTEP*CSSCTC Trigger: GCAAGTACAAGAAGAACATCAAGGCTCTGTACATCG...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCACGATGTACAGAGCCTTaGTGTTCTTCTTGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPRCTEP*CSSCTC Trigger: GCAAGTACAAGAAGAACATCAAGGCTCTGTACATCG...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAATATTGTATTTCTGCTaGACTTCCCGGACAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQCSLPSNQEREDQPQLPILYFC*TSRTTW Trigger: CCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATAT...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGATATTGTATTTCTGCTaGACTTCCCGGACAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEILYFC*TSRTTW Trigger: CCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATAT...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCCCCATATTGTATTTCTaGTGCACTTCCCGGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVPILYF*CTSRTT Trigger: GGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGG...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTCACTCTCCACATACTaGTCCAATGTGTGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQSLSTY*SNVCFK Trigger: TTTGAAACACACATTGGACCAGTATGTGGAGAGTGA...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGTCACTCTCCACATACTaGTCCAATGTGTGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWPPHSPKEAARTYPAGVSLSTY*SNVCFK Trigger: TTTGAAACACACATTGGACCAGTATGTGGAGAGTGA...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGATTTGATGAACATGGTTaGGTGCACGATGTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRFDEHG*VHDVQS Trigger: GCTCTGTACATCGTGCACCCAACCATGTTCATCAAA...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAACTTCCCGGACAACCTaGGTGTTGGCAGACCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRTSRTT*VLADLR Trigger: CCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGATTGGTCATCTTGTTCTaGTCACAGTGGGCAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRLVILF*SQWADI Trigger: GATATCTGCCCACTGTGACCAGAACAAGATGACCAA...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCTGGGCATCTGTGCTaGGGAACAATTCCCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESPGHLC*GTIPLD Trigger: ATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAAGATGCCCTCAGTGGTaGGAGCGTGAGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRRCPQW*EREPAS Trigger: ACTTGCAGGCTCACGCTCTCACCACTGAGGGCATCT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGATGCTCCAGCTTCACGTaGTCGCTCAGCTCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRCSSFT*SLSSLR Trigger: CCTGAGTGAGCTGAGCGAGCACGTGAAGCTGGAGCA...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCAGTTCTTCTCATCAATaGAGGCCAGCTTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVSSSHQ*RPASTG Trigger: ACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCTTTGATGAACATGGTTaGGTGCACGATGTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGFDEHG*VHDVQS Trigger: GCTCTGTACATCGTGCACCCAACCATGTTCATCAAA...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAATGGGAATGGGGTCCTaGCCTGGGCTTTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRMGMGS*PGLFSW Trigger: CCAGGAGAAAAGCCCAGGCCAGGACCCCATTCCCAT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAGTCACTTCCACTCTCTaGCTTTCATCAATATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRVTSTL*LSSILR Trigger: CCTCAATATTGATGAAAGCCAGAGAGTGGAAGTGAC...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGGTCACTTCCACTCTCTaGCTTTCATCAATATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTPVRLMPGGQVQLGLPEVTSTL*LSSILR Trigger: CCTCAATATTGATGAAAGCCAGAGAGTGGAAGTGAC...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCTTGTTCTGGTCACAGTaGGCAGATATCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESLFWSQ*ADICTR Trigger: CCTGGTGCAGATATCTGCCCACTGTGACCAGAACAA...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCAGGTTCTGGAGAGCTaGTTTTGGAGTCATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESQVLES*FWSHLT Trigger: AGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCATGAACATGGTTGGGTaGACGATGTACAGAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESMNMVG*TMYRAL Trigger: CAAGGCTCTGTACATCGTGCACCCAACCATGTTCAT...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTCCCATATTGTATTTCTaGTGCACTTCCCGGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: SLSCKIISTDLMVASTTSPILYF*CTSRTT Trigger: GGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGG...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCCATATTGTATTTCTaGTGCACTTCCCGGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESPILYF*CTSRTT Trigger: GGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGACAGTGGGCAGATATCTaGACCAGGAAGGCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRQWADI*TRKAVR Trigger: CCTGACTGCCTTCCTGGTGCAGATATCTGCCCACTG...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGGTTCAGAGCTTGGCTaGTGTCATCCAGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRGSELG*CHPASG Trigger: ACCTGACGCTGGATGACACCAGCCAAGCTCTGAACC...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGGCCAGCTTCAACTaGTTCAGAGCTTGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLREASFN*FRAWLV Trigger: CACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTC...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCGTCACTTCCACTCTCTaGCTTTCATCAATATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGVTSTL*LSSILR Trigger: CCTCAATATTGATGAAAGCCAGAGAGTGGAAGTGAC...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR TCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCGATGTACAGAGCCTTaGTGTTCTTCTTGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESRCTEP*CSSCTC Trigger: GCAAGTACAAGAAGAACATCAAGGCTCTGTACATCG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCTGGAGTCATCTGACTTaGGGAAGTCTGGCATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKALSVFRASEFLTLRESWSHLT*GSLAFH Trigger: ATGAAATGCCAGACTTCCCCAAGTCAGATGACTCCA...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCTCACTCTCCACATACTaGTCCAATGTGTGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWHQRPATTVVQERASEVSLSTY*SNVCFK Trigger: TTTGAAACACACATTGGACCAGTATGTGGAGAGTGA...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTTTGGTCATCTTGTTCTaGTCACAGTGGGCAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: SLSCKIISTDLMVASTTSLVILF*SQWADI Trigger: GATATCTGCCCACTGTGACCAGAACAAGATGACCAA...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTGTCACTTCCACTCTCTaGCTTTCATCAATATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSCKIISTDLMVASTTSVTSTL*LSSILR Trigger: CCTCAATATTGATGAAAGCCAGAGAGTGGAAGTGAC...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGATTGTTCTGGTCACAGTaGGCAGATATCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRLFWSQ*ADICTR Trigger: CCTGGTGCAGATATCTGCCCACTGTGACCAGAACAA...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAGGGCTTGGGAGCTGTTaGAGGGCTTTTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SANGKIHDWCQGNRGKCEGLGSC*RAFLCG Trigger: TCCACACAGAAAAGCCCTGCAACAGCTCCCAAGCCC...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR GCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAAGAGTTTGGAGAACCTaGTGTGTCACTTCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRRVWRT*CVTSTL Trigger: GAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAAGGGCTTGTTGTCACTaGTCAGGCCATGGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SANGKIHDWCQGNRGKCERACCH*SGHGAG Trigger: ACCTGCACCATGGCCTGACCAGTGACAACAAGCCCT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGATGGAGTCATCTGACTTaGGGAAGTCTGGCATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKALSVFRASEFLTLRWSHLT*GSLAFH Trigger: ATGAAATGCCAGACTTCCCCAAGTCAGATGACTCCA...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAGTGTGTCACAGGTTCTaGAGAGCTGCTTTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SANGKIHDWCQGNRGKCEVCHRF*RAAFGV Trigger: GACTCCAAAAGCAGCTCTCCAGAACCTGTGACACAC...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAATCCTCTGGCAGAGTTTaGAGAACCTGCTGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SANGKIHDWCQGNRGKCESSGRV*RTCCVT Trigger: AGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGA...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAAGTTCTTCTCATCAATaGAGGCCAGCTTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SANGKIHDWCQGNRGKCESSSHQ*RPASTG Trigger: ACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CCA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAATCACTCTCCACATACTaGTCCAATGTGTGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SANGKIHDWCQGNRGKCESLSTY*SNVCFK Trigger: TTTGAAACACACATTGGACCAGTATGTGGAGAGTGA...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGCGGACAACCTGGGTGTaGGCAGACCTCCGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LWPPHSPKEAARTYPAGVRTTWV*ADLRKM Trigger: CATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCCG...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS TCA 90 bp | CAGAGCTTGGCTGGTGTCATCCAGCGTCAGGTCATCTTGCAGCTCTaGGAGAGGGTCCATGGCTCGTTCCGGCAATGCTTCCTCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSLAGVIQRQVILQL*ERVHGSFRQCFLCH Trigger: GTGGCAGAGGAAGCATTGCCGGAACGAGCCATGGACCCTCTCTCAGAGCTGCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
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| CDS CCA 90 bp | ACCGGCAGCCCCATATTGTATTTCTGCTGCACTTCCCGGACAACCTaGGTGTTGGCAGACCTCCGGAAGATGCCCTCAGTGGTGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGSPILYFCCTSRTT*VLADLRKMPSVVRA Trigger: CGCTCTCACCACTGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGCAACTGGTTCAGAGCTaGGCTGGTGTCATCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LWPPHSPKEAARTYPAGVQLVQS*AGVIQR Trigger: ACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTG...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGCTCCTCTGGCAGAGTTaGGAGAACCTGCTGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQLLWQS*ENLLCH Trigger: GTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAG...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS TCA 90 bp | TCTTGTACTTGCGGTCAAACTCTCGGTAGGCATCCCGTAGCCAGCTaGGGGAGGGCTTGTTGTCACTGGTCAGGCCATGGTGCAGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SCTCGQTLGRHPVAS*GRACCHWSGHGAGT Trigger: TGTACCTGCACCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTTGACCGCAAGTACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 90 bp | AACTGGTTCAGAGCTTGGCTGGTGTCATCCAGCGTCAGGTCATCTTaGAGCTCTGAGAGAGGGTCCATGGCTCGTTCCGGCAATGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NWFRAWLVSSSVRSS*SSERGSMARSGNAS Trigger: GGAAGCATTGCCGGAACGAGCCATGGACCCTCTCTCAGAGCTGCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCTGAACCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTCTGGAGAGCTGCTTTaGGAGTCATCTGACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQSGELL*ESSDLG Trigger: CCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGA...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGATCATACTTGAGCACTaGGCGAGGGATCCCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQIILEH*ARDPQL Trigger: CAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGAT...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCCGGACAACCTGGGTGTaGGCAGACCTCCGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LWHQRPATTVVQERASEVRTTWV*ADLRKM Trigger: CATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCCG...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGACCGGCAGCCCCATATaGTATTTCTGCTGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQTGSPI*YFCCTS Trigger: GGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGT...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 90 bp | TCAGGAAGCTCCCGAAGGAATGTCTTGAGGATGACAGCGGGCAAGTaGAGCTCGTTGTACTGGTCAAAGTCCACCGGCAGCCCCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: SGSSRRNVLRMTAGK*SSLYWSKSTGSPIL Trigger: CAATATGGGGCTGCCGGTGGACTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATTCCTTCGGGAGCTTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCATCTGGAGAGCTGCTTTaGGAGTCATCTGACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QEALWPPHSPKEAARTYPSGELL*ESSDLG Trigger: CCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGA...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAATCATACTTGAGCACTaGGCGAGGGATCCCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WGLTAALVAPETCYNSGAIILEH*ARDPQL Trigger: CAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGAT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGAGGAAGTCATCATACTaGAGCACTTGGCGAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQRKSSY*STWRGI Trigger: GATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCT...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGAGGAAGTCATCATACTaGAGCACTTGGCGAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LWPPHSPKEAARTYPAGVRKSSY*STWRGI Trigger: GATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCACTCCTCTGGCAGAGTTaGGAGAACCTGCTGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQCSLPSNQEREDQPQLPLLWQS*ENLLCH Trigger: GTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAG...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCTCCTCTGGCAGAGTTaGGAGAACCTGCTGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLPSNQEREDQPQLPAQLLWQS*ENLLCH Trigger: GTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAG...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCCAACTGGTTCAGAGCTaGGCTGGTGTCATCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGQLVQS*AGVIQR Trigger: ACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTG...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | ATAGTACACTCTGGGGGCAGTACCACTTGGGGAAGAACAGACCCAGGAGGCAGAATCATACTTGAGCACTaGGCGAGGGATCCCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: IVHSGGSTTWGRTDPGGRIILEH*ARDPQL Trigger: CAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGAT...TCTGCCTCCTGGGTCTGTTCTTCCCCAAGTGGTACTGCCCCCAGAGTGTACTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTACCGGCAGCCCCATATaGTATTTCTGCTGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSVFRASEFLTLRESPGTGSPI*YFCCTS Trigger: GGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGACCGGCAGCCCCATATaGTATTTCTGCTGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WTPVRLMPGGQVQLGLPETGSPI*YFCCTS Trigger: GGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGT...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTTTAGTGTTGGTCATCTaGTTCTGGTCACAGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GWGLTAALVAPETCYNSGLVLVI*FWSQWA Trigger: TGCCCACTGTGACCAGAACAAGATGACCAACACTAA...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGTTAGTGTTGGTCATCTaGTTCTGGTCACAGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWPPHSPKEAARTYPAGVLVLVI*FWSQWA Trigger: TGCCCACTGTGACCAGAACAAGATGACCAACACTAA...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAATGGGATTGATAGCCTaGAGGGTGATGGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QEALWPPHSPKEAARTYPMGLIA*RVMAAS Trigger: AGATGCTGCCATCACCCTCAAGGCTATCAATCCCAT...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGATGGGATTGATAGCCTaGAGGGTGATGGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FLAIRKERTSPSYQHSQQMGLIA*RVMAAS Trigger: AGATGCTGCCATCACCCTCAAGGCTATCAATCCCAT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAGCAGGGGTGAAGGTGTTGATGGGATaGATAGCCTTGAGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LWPPHSPKEAARTYPAGVKVLMG*IALRVM Trigger: CATCACCCTCAAGGCTATCAATCCCATCAACACCTT...CACCCCTGCTGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 90 bp | TCTTCTCATCAATGGAGGCCAGCTTCAACTGGTTCAGAGCTTGGCTaGTGTCATCCAGCGTCAGGTCATCTTGCAGCTCTGAGAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHQWRPASTGSELG*CHPASGHLAALREG Trigger: ACCCTCTCTCAGAGCTGCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 90 bp | CACCAGGAAGGCAGTCAGGAAATGAAGCACCTGGTAGTTCTCCTCTaGCAGAGTTTGGAGAACCTGCTGTGTCACTTCCACTCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQEGSQEMKHLVVLL*QSLENLLCHFHSLA Trigger: AGCCAGAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCAGGTGCTTCATTTCCTGACTGCCTTCCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGAGGATAAGCAGAGTTTaGATGAACATGGTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQRISRV*MNMVGC Trigger: GCACCCAACCATGTTCATCAAAACTCTGCTTATCCT...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTAGGATAAGCAGAGTTTaGATGAACATGGTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GWGLTAALVAPETCYNSGRISRV*MNMVGC Trigger: GCACCCAACCATGTTCATCAAAACTCTGCTTATCCT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCATCATACTTGAGCACTaGGCGAGGGATCCCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LWHQRPATTVVQERASEVIILEH*ARDPQL Trigger: CAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGAT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTAGGAAGTCATCATACTaGAGCACTTGGCGAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ALSVFRASEFLTLRESPGRKSSY*STWRGI Trigger: GATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCACCGGCAGCCCCATATaGTATTTCTGCTGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGTGSPI*YFCCTS Trigger: GGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGT...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAATGGGATTGATAGCCTaGAGGGTGATGGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GQCSLPSNQEREDQPQLPMGLIA*RVMAAS Trigger: AGATGCTGCCATCACCCTCAAGGCTATCAATCCCAT...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGAAGGTGTTGATGGGATaGATAGCCTTGAGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLAIRKERTSPSYQHSQQKVLMG*IALRVM Trigger: CATCACCCTCAAGGCTATCAATCCCATCAACACCTT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGGGGAACAATTCCCCTaGATGATCCAGGAGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: GQCSLPSNQEREDQPQLPGEQFP*MIQEEL Trigger: AAGTTCCTCCTGGATCATCAAGGGGAATTGTTCCCC...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTGGGGAACAATTCCCCTaGATGATCCAGGAGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: ALSVFRASEFLTLRESPGGEQFP*MIQEEL Trigger: AAGTTCCTCCTGGATCATCAAGGGGAATTGTTCCCC...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS CCA 90 bp | CAGTTCTTCTCATCAATGGAGGCCAGCTTCAACTGGTTCAGAGCTTaGCTGGTGTCATCCAGCGTCAGGTCATCTTGCAGCTCTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QFFSSMEASFNWFRA*LVSSSVRSSCSSER Trigger: TCTCTCAGAGCTGCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS CCA 90 bp | TCATCAGAAGGCCAGTTCTTCTCATCAATGGAGGCCAGCTTCAACTaGTTCAGAGCTTGGCTGGTGTCATCCAGCGTCAGGTCATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEGQFFSSMEASFN*FRAWLVSSSVRSSC Trigger: GCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACTGGCCTTCTGATGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 90 bp | AGGAATGTCTTGAGGATGACAGCGGGCAAGTGCAGCTCGTTGTACTaGTCAAAGTCCACCGGCAGCCCCATATTGTATTTCTGCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RNVLRMTAGKCSSLY*SKSTGSPILYFCCT Trigger: AGTGCAGCAGAAATACAATATGGGGCTGCCGGTGGACTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCAACTGGTTCAGAGCTaGGCTGGTGTCATCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VKALSVFRASEFLTLRESQLVQS*AGVIQR Trigger: ACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTG...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGTTGGAGTCATCTGACTaGGGGAAGTCTGGCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLPSNQEREDQPQLPAQLESSD*GKSGIS Trigger: TGAAATGCCAGACTTCCCCAAGTCAGATGACTCCAA...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAAGGATAAGCAGAGTTTaGATGAACATGGTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QEALWPPHSPKEAARTYPRISRV*MNMVGC Trigger: GCACCCAACCATGTTCATCAAAACTCTGCTTATCCT...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGGATAAGCAGAGTTTaGATGAACATGGTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WGLTAALVAPETCYNSGARISRV*MNMVGC Trigger: GCACCCAACCATGTTCATCAAAACTCTGCTTATCCT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTATCTTCCGTCCAAACTaGAAACTGATGAGAGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GWGLTAALVAPETCYNSGIFRPN*KLMRGL Trigger: TAAGCCTCTCATCAGTTTCAAGTTTGGACGGAAGAT...ACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCATTAGTGTTGGTCATCTaGTTCTGGTCACAGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQCSLPSNQEREDQPQLPLVLVI*FWSQWA Trigger: TGCCCACTGTGACCAGAACAAGATGACCAACACTAA...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAACAGCCAAGTTAGTGTaGGTCATCTTGTTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGLTAALVAPETCYNSGATAKLV*VILFWS Trigger: TGACCAGAACAAGATGACCAACACTAACTTGGCTGT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGAACTTAGTGAAGGTGTaGATGGGATTGATAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQNLVKV*MGLIAL Trigger: CAAGGCTATCAATCCCATCAACACCTTCACTAAGTT...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS CCA 90 bp | TGGGGAAGTCTGGCATTTCATCAGAAGGCCAGTTCTTCTCATCAATaGAGGCCAGCTTCAACTGGTTCAGAGCTTGGCTGGTGTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGSLAFHQKASSSHQ*RPASTGSELGWCHP Trigger: TGGATGACACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAGACTTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTTCTGGAGAGCTGCTTTaGGAGTCATCTGACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSCKIISTDLMVASTTSSGELL*ESSDLG Trigger: CCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGA...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCAACGATGTACAGAGCCTaGATGTTCTTCTTGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QEALWPPHSPKEAARTYPTMYRA*MFFLYL Trigger: CAAGTACAAGAAGAACATCAAGGCTCTGTACATCGT...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCCAGCAGACGATGTACAGAGCCTaGATGTTCTTCTTGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLAIRKERTSPSYQHSQQTMYRA*MFFLYL Trigger: CAAGTACAAGAAGAACATCAAGGCTCTGTACATCGT...CTGCTGGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAATCTTCCGTCCAAACTaGAAACTGATGAGAGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WGLTAALVAPETCYNSGAIFRPN*KLMRGL Trigger: TAAGCCTCTCATCAGTTTCAAGTTTGGACGGAAGAT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGCTTTTCTGTGTGGATTaGAGGAAGTCATCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLGTDSSTCGTRDLLQQLFCVD*RKSSYL Trigger: CAAGTATGATGACTTCCTCAAATCCACACAGAAAAG...CTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCAGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGACGGACAACCTGGGTGTaGGCAGACCTCCGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLVKALSVFRASEFLTLRRTTWV*ADLRKM Trigger: CATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCCG...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | AGCTACCAATCATCACTGGGGCTCAGCTTTCTGAAAGACAAGAGGCCCTGTGGCTTAGTGTTGGTCATCTaGTTCTGGTCACAGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SYQSSLGLSFLKDKRPCGLVLVI*FWSQWA Trigger: TGCCCACTGTGACCAGAACAAGATGACCAACACTAA...GCCACAGGGCCTCTTGTCTTTCAGAAAGCTGAGCCCCAGTGATGATTGGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GGCCAATGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAACAGCCAAGTTAGTGTaGGTCATCTTGTTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQCSLPSNQEREDQPQLPTAKLV*VILFWS Trigger: TGACCAGAACAAGATGACCAACACTAACTTGGCTGT...TGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCATTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCAAGGTGTTGATGGGATaGATAGCCTTGAGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LWHQRPATTVVQERASEVKVLMG*IALRVM Trigger: CATCACCCTCAAGGCTATCAATCCCATCAACACCTT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGACTGACAGCAGCACTTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAACTTAGTGAAGGTGTaGATGGGATTGATAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGLTAALVAPETCYNSGANLVKV*MGLIAL Trigger: CAAGGCTATCAATCCCATCAACACCTTCACTAAGTT...TGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAAGTGCTGCTGTCAGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 90 bp | ACTTCCACTCTCTGGCTTTCATCAATATTGAGGAAGCCCACAACATaGGGGTACAGGTCAAAGGTTAGCAAGGGTTCAGGAAGCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TSTLWLSSILRKPTT*GYRSKVSKGSGSSR Trigger: TCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTGTACCCCCATGTTGTGGGCTTCCTCAATATTGATGAAAGCCAGAGAGTGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 90 bp | TTAGGGCCGAAGACTACAGCCAAGTTAGTGTTGGTCATCTTGTTCTaGTCACAGTGGGCAGATATCTGCACCAGGAAGGCAGTCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGPKTTAKLVLVILF*SQWADICTRKAVRK Trigger: TTTCCTGACTGCCTTCCTGGTGCAGATATCTGCCCACTGTGACCAGAACAAGATGACCAACACTAACTTGGCTGTAGTCTTCGGCCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCCCAGGTATCTTCCGTCCAAACTaGAAACTGATGAGAGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ALSVFRASEFLTLRESPGIFRPN*KLMRGL Trigger: TAAGCCTCTCATCAGTTTCAAGTTTGGACGGAAGAT...ACCTGGGGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCAGGAAGTCATCATACTaGAGCACTTGGCGAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VKALSVFRASEFLTLRESRKSSY*STWRGI Trigger: GATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCT...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGGCCCTGTGGCCACCACACTCCCCTAAGGAAGCTGCTAGAACCTATCCACTTTTCTGTGTGGATTaGAGGAAGTCATCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QEALWPPHSPKEAARTYPLFCVD*RKSSYL Trigger: CAAGTATGATGACTTCCTCAAATCCACACAGAAAAG...TGGATAGGTTCTAGCAGCTTCCTTAGGGGAGTGTGGTGGCCACAGGGCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | GTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAGAGTCCGGGGAACAATTCCCCTaGATGATCCAGGAGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VKALSVFRASEFLTLRESGEQFP*MIQEEL Trigger: AAGTTCCTCCTGGATCATCAAGGGGAATTGTTCCCC...GGACTCTCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGGCACCAGAGACCTGCTACAACAGTGGTGCAAGAAAGAGCCAGTGAGGTCACGATGTACAGAGCCTaGATGTTCTTCTTGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWHQRPATTVVQERASEVTMYRA*MFFLYL Trigger: CAAGTACAAGAAGAACATCAAGGCTCTGTACATCGT...GACCTCACTGGCTCTTTCTTGCACCACTGTTGTAGCAGGTCTCTGGTGCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCACTTCCTAGCAATCAGGAAAGAGAGGACCAGCCCCAGCTACCAGCACAGCTTTTCTGTGTGGATTaGAGGAAGTCATCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSLPSNQEREDQPQLPAQLFCVD*RKSSYL Trigger: CAAGTATGATGACTTCCTCAAATCCACACAGAAAAG...CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTTCCTGATTGCTAGGAAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | TGGACTCCAGTAAGGTTAATGCCAGGAGGACAAGTCCAACTCGGGCTGCCAGAGCTTTTCTGTGTGGATTaGAGGAAGTCATCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WTPVRLMPGGQVQLGLPELFCVD*RKSSYL Trigger: CAAGTATGATGACTTCCTCAAATCCACACAGAAAAG...CTCTGGCAGCCCGAGTTGGACTTGTCCTCCTGGCATTAACCTTACTGGAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGACTCCTCTGGCAGAGTTaGGAGAACCTGCTGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLVKALSVFRASEFLTLRLLWQS*ENLLCH Trigger: GTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAG...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTACGATGTACAGAGCCTaGATGTTCTTCTTGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSCKIISTDLMVASTTSTMYRA*MFFLYL Trigger: CAAGTACAAGAAGAACATCAAGGCTCTGTACATCGT...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGCTGCAAGATCATCAGTACAGATCTCATGGTAGCCAGTACCACCTCTAACTTAGTGAAGGTGTaGATGGGATTGATAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSCKIISTDLMVASTTSNLVKV*MGLIAL Trigger: CAAGGCTATCAATCCCATCAACACCTTCACTAAGTT...AGAGGTGGTACTGGCTACCATGAGATCTGTACTGATGATCTTGCAGCTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAAAGGTGTTGATGGGATaGATAGCCTTGAGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLVKALSVFRASEFLTLRKVLMG*IALRVM Trigger: CATCACCCTCAAGGCTATCAATCCCATCAACACCTT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAACAGCCAAGTTAGTGTaGGTCATCTTGTTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVKALSVFRASEFLTLRTAKLV*VILFWS Trigger: TGACCAGAACAAGATGACCAACACTAACTTGGCTGT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
||
| CDS-3UTR CAA 90 bp | CTATTAGTAAAAGCTCTGTCAGTCTTCAGGGCTTCTGAGTTTCTGACTCTCCGAAACTTAGTGAAGGTGTaGATGGGATTGATAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVKALSVFRASEFLTLRNLVKV*MGLIAL Trigger: CAAGGCTATCAATCCCATCAACACCTTCACTAAGTT...TCGGAGAGTCAGAAACTCAGAAGCCCTGAAGACTGACAGAGCTTTTACTAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAATTGGAGTCATCTGACTaGGGGAAGTCTGGCATTTCA | + |
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Preference number: 5 (lower is better) Translates to: SANGKIHDWCQGNRGKCELESSD*GKSGIS Trigger: TGAAATGCCAGACTTCCCCAAGTCAGATGACTCCAA...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAACAGCCAAGTTAGTGTaGGTCATCTTGTTCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SANGKIHDWCQGNRGKCETAKLV*VILFWS Trigger: TGACCAGAACAAGATGACCAACACTAACTTGGCTGT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS-3UTR CAA 90 bp | AGTGCAAACGGTAAAATACATGATTGGTGCCAAGGAAATCGTGGTAAATGTGAAATCTTCCGTCCAAACTaGAAACTGATGAGAGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: SANGKIHDWCQGNRGKCEIFRPN*KLMRGL Trigger: TAAGCCTCTCATCAGTTTCAAGTTTGGACGGAAGAT...TTCACATTTACCACGATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS TCA 72 bp | GGGTGTTGGCAGACCTCCGGAAGATGCCCTCAGTGGTaGGAGCGTGAGCCTGCAAGTAGGCGACGGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GCWQTSGRCPQW*EREPASRRRSP Trigger: GGGAGACCGTCGCCTACTTGCAGGCTCACGCTCTCACCACTGAGGGCATCTTCCGGAGGTCTGCCAACACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 72 bp | GAGAGGGTCCATGGCTCGTTCCGGCAATGCTTCCTCTaGCACGCCTGTCAAAGCTCGGCAAACATCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ERVHGSFRQCFL*HACQSSANIRL Trigger: GAGCCGGATGTTTGCCGAGCTTTGACAGGCGTGGCAGAGGAAGCATTGCCGGAACGAGCCATGGACCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
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| CDS TCA 72 bp | TGCGGTCAAACTCTCGGTAGGCATCCCGTAGCCAGCTaGGGGAGGGCTTGTTGTCACTGGTCAGGCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: CGQTLGRHPVAS*GRACCHWSGHG Trigger: ACCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTTGACCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 72 bp | AGAGCTTGGCTGGTGTCATCCAGCGTCAGGTCATCTTaGAGCTCTGAGAGAGGGTCCATGGCTCGTTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: RAWLVSSSVRSS*SSERGSMARSG Trigger: GCCGGAACGAGCCATGGACCCTCTCTCAGAGCTGCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
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| CDS TCA 72 bp | GCTGGTGTCATCCAGCGTCAGGTCATCTTGCAGCTCTaGGAGAGGGTCCATGGCTCGTTCCGGCAATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AGVIQRQVILQL*ERVHGSFRQCF Trigger: GAAGCATTGCCGGAACGAGCCATGGACCCTCTCTCAGAGCTGCAAGATGACCTGACGCTGGATGACACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111331.9 |
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| CDS GCA 72 bp | TCATCATACTTGAGCACTTGGCGAGGGATCCCCAACTaGTCCAGCTTCACGTGCTCGCTCAGCTCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSYLSTWRGIPN*SSFTCSLSSLR Trigger: CCTGAGTGAGCTGAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 72 bp | TCCCGAAGGAATGTCTTGAGGATGACAGCGGGCAAGTaGAGCTCGTTGTACTGGTCAAAGTCCACCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SRRNVLRMTAGK*SSLYWSKSTGS Trigger: GCTGCCGGTGGACTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATTCCTTCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 72 bp | TCAAAGTCCACCGGCAGCCCCATATTGTATTTCTGCTaGACTTCCCGGACAACCTGGGTGTTGGCAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: SKSTGSPILYFC*TSRTTWVLADL Trigger: GAGGTCTGCCAACACCCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGTGGACTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 72 bp | TGGTCAAAGTCCACCGGCAGCCCCATATTGTATTTCTaGTGCACTTCCCGGACAACCTGGGTGTTGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: WSKSTGSPILYF*CTSRTTWVLAD Trigger: GTCTGCCAACACCCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGGGCTGCCGGTGGACTTTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | GGCCAGTTCTTCTCATCAATGGAGGCCAGCTTCAACTaGTTCAGAGCTTGGCTGGTGTCATCCAGCGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GQFFSSMEASFN*FRAWLVSSSVR Trigger: CCTGACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACTGGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | CCCATATTGTATTTCTGCTGCACTTCCCGGACAACCTaGGTGTTGGCAGACCTCCGGAAGATGCCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PILYFCCTSRTT*VLADLRKMPSV Trigger: CACTGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGTGCAGCAGAAATACAATATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 72 bp | TTGTATTTCTGCTGCACTTCCCGGACAACCTGGGTGTaGGCAGACCTCCGGAAGATGCCCTCAGTGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LYFCCTSRTTWV*ADLRKMPSVVR Trigger: TCTCACCACTGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTTGTCCGGGAAGTGCAGCAGAAATACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 72 bp | CTCATCAATGGAGGCCAGCTTCAACTGGTTCAGAGCTaGGCTGGTGTCATCCAGCGTCAGGTCATCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LINGGQLQLVQS*AGVIQRQVILQ Trigger: CTGCAAGATGACCTGACGCTGGATGACACCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 72 bp | AATGTCTTGAGGATGACAGCGGGCAAGTGCAGCTCGTaGTACTGGTCAAAGTCCACCGGCAGCCCCATATTG | + |
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Preference number: 6 (lower is better) Translates to: NVLRMTAGKCSS*YWSKSTGSPIL Trigger: CAATATGGGGCTGCCGGTGGACTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 72 bp | GTTAGCAAGGGTTCAGGAAGCTCCCGAAGGAATGTCTaGAGGATGACAGCGGGCAAGTGCAGCTCGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VSKGSGSSRRNV*RMTAGKCSSLY Trigger: GTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 90 bp | TCCCGAAGGAATGTCTTGAGGATGACAGCGGGCAAGTGCAGCTCGTaGTACTGGTCAAAGTCCACCGGCAGCCCCATATTGTATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRRNVLRMTAGKCSS*YWSKSTGSPILYFC Trigger: GCAGAAATACAATATGGGGCTGCCGGTGGACTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATTCCTTCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS GCA 72 bp | CATCCCACTTCAGGTGTGTCACAGGTTCTGGAGAGCTaGTTTTGGAGTCATCTGACTTGGGGAAGTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HPTSGVSQVLES*FWSHLTWGSLA Trigger: TGCCAGACTTCCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTGACACACCTGAAGTGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | TGTGTGGATTTGAGGAAGTCATCATACTTGAGCACTTaGCGAGGGATCCCCAACTGCTCCAGCTTCACGTGC | + |
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Preference number: 6 (lower is better) Translates to: CVDLRKSSYLST*RGIPNCSSFTC Trigger: GCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCTCAAATCCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | TTGAGGATGACAGCGGGCAAGTGCAGCTCGTTGTACTaGTCAAAGTCCACCGGCAGCCCCATATTGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: LRMTAGKCSSLY*SKSTGSPILYF Trigger: GAAATACAATATGGGGCTGCCGGTGGACTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 90 bp | AGGTCAAAGGTTAGCAAGGGTTCAGGAAGCTCCCGAAGGAATGTCTaGAGGATGACAGCGGGCAAGTGCAGCTCGTTGTACTGGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RSKVSKGSGSSRRNV*RMTAGKCSSLYWSK Trigger: CTTTGACCAGTACAACGAGCTGCACTTGCCCGCTGTCATCCTCAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 90 bp | TTAGCCCAGAGCAGGTTAGGGCCGAAGACTACAGCCAAGTTAGTGTaGGTCATCTTGTTCTGGTCACAGTGGGCAGATATCTGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LAQSRLGPKTTAKLV*VILFWSQWADICTR Trigger: CCTGGTGCAGATATCTGCCCACTGTGACCAGAACAAGATGACCAACACTAACTTGGCTGTAGTCTTCGGCCCTAACCTGCTCTGGGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | CTGGCATTTCATCAGAAGGCCAGTTCTTCTCATCAATaGAGGCCAGCTTCAACTGGTTCAGAGCTTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LAFHQKASSSHQ*RPASTGSELGW Trigger: CCAGCCAAGCTCTGAACCAGTTGAAGCTGGCCTCCATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 72 bp | GAAATGAAGCACCTGGTAGTTCTCCTCTGGCAGAGTTaGGAGAACCTGCTGTGTCACTTCCACTCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: EMKHLVVLLWQS*ENLLCHFHSLA Trigger: AGCCAGAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCAGGTGCTTCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 90 bp | GGCAGTCAGGAAATGAAGCACCTGGTAGTTCTCCTCTGGCAGAGTTaGGAGAACCTGCTGTGTCACTTCCACTCTCTGGCTTTCATCAAT | + |
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Preference number: 6 (lower is better) Translates to: GSQEMKHLVVLLWQS*ENLLCHFHSLAFIN Trigger: ATTGATGAAAGCCAGAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCAGGTGCTTCATTTCCTGACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | GCCAAGTTAGTGTTGGTCATCTTGTTCTGGTCACAGTaGGCAGATATCTGCACCAGGAAGGCAGTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AKLVLVILFWSQ*ADICTRKAVRK Trigger: TTTCCTGACTGCCTTCCTGGTGCAGATATCTGCCCACTGTGACCAGAACAAGATGACCAACACTAACTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 72 bp | AGCAGGTTAGGGCCGAAGACTACAGCCAAGTTAGTGTaGGTCATCTTGTTCTGGTCACAGTGGGCAGATATC | + |
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Preference number: 6 (lower is better) Translates to: SRLGPKTTAKLV*VILFWSQWADI Trigger: GATATCTGCCCACTGTGACCAGAACAAGATGACCAACACTAACTTGGCTGTAGTCTTCGGCCCTAACCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | AAGACTACAGCCAAGTTAGTGTTGGTCATCTTGTTCTaGTCACAGTGGGCAGATATCTGCACCAGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: KTTAKLVLVILF*SQWADICTRKA Trigger: TGCCTTCCTGGTGCAGATATCTGCCCACTGTGACCAGAACAAGATGACCAACACTAACTTGGCTGTAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | AGAGTTTGGAGAACCTGCTGTGTCACTTCCACTCTCTaGCTTTCATCAATATTGAGGAAGCCCACAACATGG | + |
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Preference number: 6 (lower is better) Translates to: RVWRTCCVTSTL*LSSILRKPTTW Trigger: CCATGTTGTGGGCTTCCTCAATATTGATGAAAGCCAGAGAGTGGAAGTGACACAGCAGGTTCTCCAAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CAA 90 bp | CCAAACTTGAAACTGATGAGAGGCTTAAAGAGGATAAGCAGAGTTTaGATGAACATGGTTGGGTGCACGATGTACAGAGCCTTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: PNLKLMRGLKRISRV*MNMVGCTMYRALMF Trigger: GAACATCAAGGCTCTGTACATCGTGCACCCAACCATGTTCATCAAAACTCTGCTTATCCTCTTTAAGCCTCTCATCAGTTTCAAGTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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| CDS CCA 72 bp | CTTAAAGAGGATAAGCAGAGTTTTGATGAACATGGTTaGGTGCACGATGTACAGAGCCTTGATGTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LKEDKQSFDEHG*VHDVQSLDVLL Trigger: AAGAAGAACATCAAGGCTCTGTACATCGTGCACCCAACCATGTTCATCAAAACTCTGCTTATCCTCTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090614.11 ENSMUST00000111329.8 ENSMUST00000111330.3 ENSMUST00000111331.9 |
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