Pregenerated sensors for ARG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019987Ensembl transcript IDs: ENSMUST00000020161.10
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATACATGTTTCCTAGTTTTATAGCTGTTTTGATTTCCACATCCTaGATTTCATACCAGAAAGGAACTGCTGGGATACATACTTACTGG | + |
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Preference number: 1 (lower is better) Translates to: EYMFPSFIAVLISTS*ISYQKGTAGIHTYW Trigger: CCAGTAAGTATGTATCCCAGCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAACTAGGAAACATGTATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| 3UTR-3UTR GCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCGGAGGAGAAGGCGTTTaGTTAGTTCTGTCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: FYSCFDFHILNFIPERNCGGEGV*LVLSAL Trigger: CAAAGCAGACAGAACTAAGCAAACGCCTTCTCCTCC...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| 3UTR GCA 72 bp | GCCCTTGGGAGGAGAAGGCGTTTGCTTAGTTCTGTCTaGTTTGCTGTGATGCCCCAGATGGTTTTCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: ALGRRRRLLSSV*FAVMPQMVFMW Trigger: CCACATGAAAACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCTCCCAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| 3UTR TCA 72 bp | GGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTaGTGCCCCAGATGGTTTTCATGTGGCGCATTCACA | + |
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Preference number: 3 (lower is better) Translates to: GEGVCLVLSALL*CPRWFSCGAFT Trigger: TGTGAATGCGCCACATGAAAACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| 3UTR TCA 72 bp | TTTCCTAGTTTTATAGCTGTTTTGATTTCCACATCCTaGATTTCATACCAGAAAGGAACTGCTGGGATACAT | + |
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Preference number: 3 (lower is better) Translates to: FPSFIAVLISTS*ISYQKGTAGIH Trigger: ATGTATCCCAGCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAACTAGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTGGGTGGACCCTGGCGTaGCCAGAGATGCTTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVGWTLA*PEMLPT Trigger: AGTTGGAAGCATCTCTGGCCACGCCAGGGTCCACCC...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR GCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTATTCTTCTGGACCTCTaGCACCACACCAGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVILLDL*HHTSQL Trigger: GAGCTGGCTGGTGTGGTGGCAGAGGTCCAGAAGAAT...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR GCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTTGGCGTGGCCAGAGATaGTTCCAACTGCCAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVWRGQR*FQLPDC Trigger: ACAGTCTGGCAGTTGGAAGCATCTCTGGCCACGCCA...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTCAGCCAGCTCTTCATTaGCTTTCCCCACAGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVQPALH*LSPQTV Trigger: CACGGTCTGTGGGGAAAGCCAATGAAGAGCTGGCTG...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR GCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTACCAGCTTTCCTCAGTaGTGCAGGGCCTTTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVTSFPQ*CRAFLY Trigger: GTAGAGAAAGGCCCTGCAGCACTGAGGAAAGCTGGT...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR GCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTGACACAGGTTGCCCATaGAGATTCCCAGAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVDTGCP*RFPELV Trigger: AACCAGCTCTGGGAATCTGCATGGGCAACCTGTGTC...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTTCGAGGCTGTCCTTTTaGGAAAGGCGCTCCGATAAT | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVSRLSF*ERRSDN Trigger: ATTATCGGAGCGCCTTTCTCAAAAGGACAGCCTCGA...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR GCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTTGTCTTTGGCAGATATaGAGGGAGTCACCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVCLWQI*RESPRR Trigger: TCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACA...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTCACCCAGGAGAATCCTaGTACATCTGGGAACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVHPGES*YIWELS Trigger: GGAAAGTTCCCAGATGTACCAGGATTCTCCTGGGTG...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| 3UTR CAA 72 bp | TTTCTAAAAGAACAAGCCCTTGGGAGGAGAAGGCGTTaGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLKEQALGRRRR*LSSVCFAVMPQ Trigger: CTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCTCCCAAGGGCTTGTTCTTTTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTTTGGGTTCACTTCCATaGTATCTAGTCCTGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVLGSLP*YLVLKG Trigger: TCCTTTCAGGACTAGATATCATGGAAGTGAACCCAA...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTTGTAAATTTCTTCTGTaGTGTAGAGACCTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVCKFLL*CRDLLC Trigger: ACAGAGAAGGTCTCTACATCACAGAAGAAATTTACA...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCCCAACTGCCAGACTGTaGTCTCCACCCAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCPTARL*SPPSTT Trigger: TGTGGTGCTGGGTGGAGACCACAGTCTGGCAGTTGG...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCGAGCATCCACCCAAATaGCACATAGGTCAGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCEHPPK*HIGQGG Trigger: TCCACCCTGACCTATGTGTCATTTGGGTGGATGCTC...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCTTCCCAGCAGGTAGCTaGAGGTCTCTTCCATCACCT | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCFPAGS*RSLPSP Trigger: AGGTGATGGAAGAGACCTTCAGCTACCTGCTGGGAA...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR GCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCAGAGATGCTTCCAACTaGCAGACTGTGGTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCRDASN*QTVVST Trigger: GGTGGAGACCACAGTCTGGCAGTTGGAAGCATCTCT...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCTTGTCAGGGGAGTGTTaGTGTCAGTGTGAGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCLSGEC*CQCEHP Trigger: TGGATGCTCACACTGACATCAACACTCCCCTGACAA...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCACTCTTCCATTCTTCTaGACCTCTGCCACCACACCA | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCTLPFF*TSATTP Trigger: TGGTGTGGTGGCAGAGGTCCAGAAGAATGGAAGAGT...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR TCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCGGGTTCTTCACAATTTaGAAGGAGCTGTCATTAGGG | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCGFFTI*KELSLG Trigger: CCCTAATGACAGCTCCTTTCAAATTGTGAAGAACCC...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCTGTACACGATGTCTTTaGCAGATATGCAGGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCCTRCL*QICRES Trigger: TGACTCCCTGCATATCTGCCAAAGACATCGTGTACA...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CCA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCTTTCCCCACAGACCGTaGGTTCTTCACAATTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: FYSCFDFHILNFIPERNCFPHRP*VLHNLK Trigger: TTTCAAATTGTGAAGAACCCACGGTCTGTGGGGAAA...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 90 bp | GGGTGGACCCTGGCGTGGCCAGAGATGCTTCCAACTGCCAGACTGTaGTCTCCACCCAGCACCACACTGACTCTTCCATTCTTCTGGACC | + |
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Preference number: 5 (lower is better) Translates to: GWTLAWPEMLPTARL*SPPSTTLTLPFFWT Trigger: GGTCCAGAAGAATGGAAGAGTCAGTGTGGTGCTGGGTGGAGACCACAGTCTGGCAGTTGGAAGCATCTCTGGCCACGCCAGGGTCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 90 bp | AGATGCTTCCAACTGCCAGACTGTGGTCTCCACCCAGCACCACACTaGCTCTTCCATTCTTCTGGACCTCTGCCACCACACCAGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RCFQLPDCGLHPAPH*LFHSSGPLPPHQPA Trigger: AGCTGGCTGGTGTGGTGGCAGAGGTCCAGAAGAATGGAAGAGTCAGTGTGGTGCTGGGTGGAGACCACAGTCTGGCAGTTGGAAGCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 90 bp | GTTCCCCAGGGTCTACGTCTCGCAAGCCAATGTACACGATGTCTTTaGCAGATATGCAGGGAGTCACCCAGGAGAATCCTGGTACATCTG | + |
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Preference number: 5 (lower is better) Translates to: VPQGLRLASQCTRCL*QICRESPRRILVHL Trigger: CAGATGTACCAGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACATCGTGTACATTGGCTTGCGAGACGTAGACCCTGGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 90 bp | AGCTCTTCATTGGCTTTCCCCACAGACCGTGGGTTCTTCACAATTTaGAAGGAGCTGTCATTAGGGACATCAACAAAGGCCAGGTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: SSSLAFPTDRGFFTI*KELSLGTSTKARSP Trigger: CGGGGACCTGGCCTTTGTTGATGTCCCTAATGACAGCTCCTTTCAAATTGTGAAGAACCCACGGTCTGTGGGGAAAGCCAATGAAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 90 bp | CAAAGCTCAGGTGAATCGGCCTTTTCTTCCTTCCCAGCAGGTAGCTaGAGGTCTCTTCCATCACCTTGCCAATCCCCAGCTTGTCTACTT | + |
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Preference number: 5 (lower is better) Translates to: QSSGESAFSSFPAGS*RSLPSPCQSPACLL Trigger: AAGTAGACAAGCTGGGGATTGGCAAGGTGATGGAAGAGACCTTCAGCTACCTGCTGGGAAGGAAGAAAAGGCCGATTCACCTGAGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS GCA 90 bp | GGTCTACGTCTCGCAAGCCAATGTACACGATGTCTTTGGCAGATATaGAGGGAGTCACCCAGGAGAATCCTGGTACATCTGGGAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: GLRLASQCTRCLWQI*RESPRRILVHLGTF Trigger: GAAAGTTCCCAGATGTACCAGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACATCGTGTACATTGGCTTGCGAGACGTAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 90 bp | TGCCACCACACCAGCCAGCTCTTCATTGGCTTTCCCCACAGACCGTaGGTTCTTCACAATTTGAAAGGAGCTGTCATTAGGGACATCAAC | + |
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Preference number: 5 (lower is better) Translates to: CHHTSQLFIGFPHRP*VLHNLKGAVIRDIN Trigger: GTTGATGTCCCTAATGACAGCTCCTTTCAAATTGTGAAGAACCCACGGTCTGTGGGGAAAGCCAATGAAGAGCTGGCTGGTGTGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CAA 90 bp | AGGAGAAGGCGTTTGCTTAGTTCTGTCTGCTTTGCTGTGATGCCCCAGATGGTTGTCTCTTCCATCACCTaGCCAATCCCCAGCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: RRRRLLSSVCFAVMPQMVVSSIT*PIPSLS Trigger: AGACAAGCTGGGGATTGGCAAGGTGATGGAAGAGAC...AACCATCTGGGGCATCACAGCAAAGCAGACAGAACTAAGCAAACGCCTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 90 bp | TCTTCACCTCCTCTGCTGTCTTCCCAAGAGTTGGGTTCACTTCCATaGTATCTAGTCCTGAAAGGAGCCCTGTCTTGTAAATTTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SSPPLLSSQELGSLP*YLVLKGALSCKFLL Trigger: CAGAAGAAATTTACAAGACAGGGCTCCTTTCAGGACTAGATATCATGGAAGTGAACCCAACTCTTGGGAAGACAGCAGAGGAGGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS-3UTR CAA 90 bp | TTTTATAGCTGTTTTGATTTCCACATCCTGAATTTCATACCAGAAAGGAACTGCCCAGCCAGCTCTTCATaGGCTTTCCCCACAGACCGT | + |
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Preference number: 5 (lower is better) Translates to: FYSCFDFHILNFIPERNCPASSS*AFPTDR Trigger: ACGGTCTGTGGGGAAAGCCAATGAAGAGCTGGCTGG...GCAGTTCCTTTCTGGTATGAAATTCAGGATGTGGAAATCAAAACAGCTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS GCA 72 bp | CACATAGGTCAGGGTGGACCCTGGCGTGGCCAGAGATaGTTCCAACTGCCAGACTGTGGTCTCCACCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HIGQGGPWRGQR*FQLPDCGLHPA Trigger: TGCTGGGTGGAGACCACAGTCTGGCAGTTGGAAGCATCTCTGGCCACGCCAGGGTCCACCCTGACCTATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 72 bp | CAACTGCCAGACTGTGGTCTCCACCCAGCACCACACTaGCTCTTCCATTCTTCTGGACCTCTGCCACCACAC | + |
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Preference number: 6 (lower is better) Translates to: QLPDCGLHPAPH*LFHSSGPLPPH Trigger: GTGTGGTGGCAGAGGTCCAGAAGAATGGAAGAGTCAGTGTGGTGCTGGGTGGAGACCACAGTCTGGCAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 72 bp | ACCCAAATGACACATAGGTCAGGGTGGACCCTGGCGTaGCCAGAGATGCTTCCAACTGCCAGACTGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: TQMTHRSGWTLA*PEMLPTARLWS Trigger: AGACCACAGTCTGGCAGTTGGAAGCATCTCTGGCCACGCCAGGGTCCACCCTGACCTATGTGTCATTTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 72 bp | GGTGAATCGGCCTTTTCTTCCTTCCCAGCAGGTAGCTaGAGGTCTCTTCCATCACCTTGCCAATCCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GESAFSSFPAGS*RSLPSPCQSPA Trigger: AGCTGGGGATTGGCAAGGTGATGGAAGAGACCTTCAGCTACCTGCTGGGAAGGAAGAAAAGGCCGATTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS GCA 72 bp | TTCTTTAAGTTTTTCCAGCAGACCAGCTTTCCTCAGTaGTGCAGGGCCTTTCTCTACCCCTCCTCGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FFKFFQQTSFPQ*CRAFLYPSSRL Trigger: CAGCCTCGAGGAGGGGTAGAGAAAGGCCCTGCAGCACTGAGGAAAGCTGGTCTGCTGGAAAAACTTAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 72 bp | GGTCTACGTCTCGCAAGCCAATGTACACGATGTCTTTaGCAGATATGCAGGGAGTCACCCAGGAGAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLRLASQCTRCL*QICRESPRRIL Trigger: CAGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACATCGTGTACATTGGCTTGCGAGACGTAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CAA 72 bp | GGGTCTACGTCTCGCAAGCCAATGTACACGATGTCTTaGGCAGATATGCAGGGAGTCACCCAGGAGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: GSTSRKPMYTMS*ADMQGVTQENP Trigger: AGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACATCGTGTACATTGGCTTGCGAGACGTAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CAA 90 bp | TGTTCCCCAGGGTCTACGTCTCGCAAGCCAATGTACACGATGTCTTaGGCAGATATGCAGGGAGTCACCCAGGAGAATCCTGGTACATCT | + |
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Preference number: 6 (lower is better) Translates to: CSPGSTSRKPMYTMS*ADMQGVTQENPGTS Trigger: AGATGTACCAGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACATCGTGTACATTGGCTTGCGAGACGTAGACCCTGGGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CAA 90 bp | CAGCTCTTCATTGGCTTTCCCCACAGACCGTGGGTTCTTCACAATTaGAAAGGAGCTGTCATTAGGGACATCAACAAAGGCCAGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: QLFIGFPHRPWVLHN*KGAVIRDINKGQVP Trigger: GGGGACCTGGCCTTTGTTGATGTCCCTAATGACAGCTCCTTTCAAATTGTGAAGAACCCACGGTCTGTGGGGAAAGCCAATGAAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS GCA 72 bp | CTCGCAAGCCAATGTACACGATGTCTTTGGCAGATATaGAGGGAGTCACCCAGGAGAATCCTGGTACATCTG | + |
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Preference number: 6 (lower is better) Translates to: LASQCTRCLWQI*RESPRRILVHL Trigger: CAGATGTACCAGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAAGACATCGTGTACATTGGCTTGCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 72 bp | ACCAGCCAGCTCTTCATTGGCTTTCCCCACAGACCGTaGGTTCTTCACAATTTGAAAGGAGCTGTCATTAGG | + |
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Preference number: 6 (lower is better) Translates to: TSQLFIGFPHRP*VLHNLKGAVIR Trigger: CCTAATGACAGCTCCTTTCAAATTGTGAAGAACCCACGGTCTGTGGGGAAAGCCAATGAAGAGCTGGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CCA 72 bp | TTTGGCAGATATGCAGGGAGTCACCCAGGAGAATCCTaGTACATCTGGGAACTTTCCTTTCAGTTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: FGRYAGSHPGES*YIWELSFQFLQ Trigger: CTGAAGGAACTGAAAGGAAAGTTCCCAGATGTACCAGGATTCTCCTGGGTGACTCCCTGCATATCTGCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 72 bp | CCTCTGCTGTCTTCCCAAGAGTTGGGTTCACTTCCATaGTATCTAGTCCTGAAAGGAGCCCTGTCTTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: PLLSSQELGSLP*YLVLKGALSCK Trigger: TTTACAAGACAGGGCTCCTTTCAGGACTAGATATCATGGAAGTGAACCCAACTCTTGGGAAGACAGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS TCA 72 bp | GTCCTGAAAGGAGCCCTGTCTTGTAAATTTCTTCTGTaGTGTAGAGACCTTCTCTGTAAGATAGGCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VLKGALSCKFLL*CRDLLCKIGLP Trigger: TGGGAGGCCTATCTTACAGAGAAGGTCTCTACATCACAGAAGAAATTTACAAGACAGGGCTCCTTTCAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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| CDS CAA 72 bp | CTGAAGGTCTCTTCCATCACCTTGCCAATCCCCAGCTaGTCTACTTCAGTCATGGAGAAATACTTAATTCCC | + |
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Preference number: 6 (lower is better) Translates to: LKVSSITLPIPS*STSVMEKYLIP Trigger: GGGAATTAAGTATTTCTCCATGACTGAAGTAGACAAGCTGGGGATTGGCAAGGTGATGGAAGAGACCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020161.10 |
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