RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARFGEF3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019852

Ensembl transcript IDs: ENSMUST00000019999.7, ENSMUST00000215836.2

Found 696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTaGGGAGAGTGGGATGGCCACTGTAGCCTGGGTGGTCAAGGGCTT +
Preference number: 1 (lower is better)
Translates to: HQRKSGGSGRGWTQS*GEWDGHCSLGGQGL
Trigger: AAGCCCTTGACCACCCAGGCTACAGTGGCCATCCCACTCTCCTCAGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp ACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATaGGAACACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAG +
Preference number: 1 (lower is better)
Translates to: TDSDVSHVTGQLADA*EHSWLESSEGLVWK
Trigger: CTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
3UTR GCA 90 bp ACTGGCGCGGCCAGCGGCCACCGCTGTGAAGACAGCAACTCACAATaGAAACAGTTCTTGAGATTCCAAGGACCTCGACTGGATGGGACT +
Preference number: 1 (lower is better)
Translates to: TGAASGHRCEDSNSQ*KQFLRFQGPRLDGT
Trigger: AGTCCCATCCAGTCGAGGTCCTTGGAATCTCAAGAACTGTTTGCATTGTGAGTTGCTGTCTTCACAGCGGTGGCCGCTGGCCGCGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp GTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTaGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTG +
Preference number: 1 (lower is better)
Translates to: VSHVTGQLADAWEHS*LESSEGLVWKDLNL
Trigger: CAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
3UTR CCA 90 bp GTGGGTGGACACAGTCCTGAGGAGAGTGGGATGGCCACTGTAGCCTaGGTGGTCAAGGGCTTAAGCCTCCTTAAGTCTAACAGAAAACCT +
Preference number: 1 (lower is better)
Translates to: VGGHSPEESGMATVA*VVKGLSLLKSNRKP
Trigger: AGGTTTTCTGTTAGACTTAAGGAGGCTTAAGCCCTTGACCACCCAGGCTACAGTGGCCATCCCACTCTCCTCAGGACTGTGTCCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp GAGGTGTCGAGGAGCAGCACATGGTCCTATACACACTGTCCTACCTaGAACGTCAGTCCACCTTGTGCAAACTGCTGTGTCCTTTCCCAA +
Preference number: 1 (lower is better)
Translates to: EVSRSSTWSYTHCPT*NVSPPCANCCVLSQ
Trigger: TTGGGAAAGGACACAGCAGTTTGCACAAGGTGGACTGACGTTCCAGGTAGGACAGTGTGTATAGGACCATGTGCTGCTCCTCGACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp TGGGGAAGCCGGCAAAGGTGCTCTGCTGGCCGCAGGGCACTTTGTTaGTTAAATGATATACGACAAGTTCACAAATTACACATGCCCCTG +
Preference number: 1 (lower is better)
Translates to: WGSRQRCSAGRRALC*LNDIRQVHKLHMPL
Trigger: CAGGGGCATGTGTAATTTGTGAACTTGTCGTATATCATTTAACCAACAAAGTGCCCTGCGGCCAGCAGAGCACCTTTGCCGGCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp CTTGTTTCACCTATGAATCAGGTAGAGGTGTCGAGGAGCAGCACATaGTCCTATACACACTGTCCTACCTGGAACGTCAGTCCACCTTGT +
Preference number: 1 (lower is better)
Translates to: LVSPMNQVEVSRSST*SYTHCPTWNVSPPC
Trigger: ACAAGGTGGACTGACGTTCCAGGTAGGACAGTGTGTATAGGACCATGTGCTGCTCCTCGACACCTCTACCTGATTCATAGGTGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp TGCTTGATACGTCAGGCTGATCTGAAAGTAAATGATTTCTACCCTTaGGTTCCCAGAGTAGCAGCAGTGGCTTCATCTGGGAGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: CLIRQADLKVNDFYP*VPRVAAVASSGSLL
Trigger: CAGCAGGCTCCCAGATGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAGATCAGCCTGACGTATCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 90 bp CTGGATGGGACTTTGACTGTCGAGGTCAGCCGGTGCCTTCCTCTCTaGATGATGTTGCAAAGATATAGTGGAAGGTTTTGTGGTTTCTAC +
Preference number: 1 (lower is better)
Translates to: LDGTLTVEVSRCLPL*MMLQRYSGRFCGFY
Trigger: GTAGAAACCACAAAACCTTCCACTATATCTTTGCAACATCATGCAGAGAGGAAGGCACCGGCTGACCTCGACAGTCAAAGTCCCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 90 bp GAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTaGGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGACAG +
Preference number: 1 (lower is better)
Translates to: ESLEKALLLGSRDLV*VGWWLGKCSQLDGQ
Trigger: CTGTCCATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR CCA 90 bp CACCTTGTGCAAACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTaGGAGGAGGGTTATTTTGGTTTATCTGCAAGCTTTGGTGGTGAC +
Preference number: 1 (lower is better)
Translates to: HLVQTAVSFPKDLSI*EEGYFGLSASFGGD
Trigger: GTCACCACCAAAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTTTGCACAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 90 bp CCTGACAGTGGAGTCAGAGATAGTTATGAGACACCATGTGAGTACTaGGAACCAAACCTGAGTCTTTTGAGAGAGCAGCCAGTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: PDSGVRDSYETPCEY*EPNLSLLREQPVLL
Trigger: TAAGAGCACTGGCTGCTCTCTCAAAAGACTCAGGTTTGGTTCTCAGTACTCACATGGTGTCTCATAACTATCTCTGACTCCACTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 90 bp CTAAATCTTTCTGGGTTCCTAAGCACATTTGTGTCCTTCTATCACTaGAGGGCTCTGAACTCTGCTTCTTGTTTCACCTATGAATCAGGT +
Preference number: 1 (lower is better)
Translates to: LNLSGFLSTFVSFYH*RALNSASCFTYESG
Trigger: ACCTGATTCATAGGTGAAACAAGAAGCAGAGTTCAGAGCCCTGCAGTGATAGAAGGACACAAATGTGCTTAGGAACCCAGAAAGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 90 bp TACTGCCACTTGTATACTATGTTGGCATCCAGACTAACCCAAGGTTaGCTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCC +
Preference number: 1 (lower is better)
Translates to: YCHLYTMLASRLTQG*LGKESLEKALLLGS
Trigger: GGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAGTCAACCTTGGGTTAGTCTGGATGCCAACATAGTATACAAGTGGCAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 90 bp GACTATGGGTGTACACCATGCTGGGATGACACATATGTATCATCATaGCTGGCTTATATGGTACTATGTTGCCTGTTTCATGACATATAC +
Preference number: 1 (lower is better)
Translates to: DYGCTPCWDDTYVSS*LAYMVLCCLFHDIY
Trigger: GTATATGTCATGAAACAGGCAACATAGTACCATATAAGCCAGGCATGATGATACATATGTGTCATCCCAGCATGGTGTACACCCATAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 90 bp AATCTCACTCTACCGTCCAGGCAAAGCTCATACTTATGGTCCTCCTaGTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGT +
Preference number: 1 (lower is better)
Translates to: NLTLPSRQSSYLWSS*FSLLSRWTYVNETC
Trigger: ACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGGAGGACCATAAGTATGAGCTTTGCCTGGACGGTAGAGTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp TGTGTAAGAACCAATTGTCGTACAATAAAACTGAGAAGGGTGAACTaGAATGTTGTAAGTAATCTAATCCCATGCTGTCTGCCCACGGGT +
Preference number: 1 (lower is better)
Translates to: CVRTNCRTIKLRRVN*NVVSNLIPCCLPTG
Trigger: ACCCGTGGGCAGACAGCATGGGATTAGATTACTTACAACATTCCAGTTCACCCTTCTCAGTTTTATTGTACGACAATTGGTTCTTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp ATGGGTGTACACCATGCTGGGATGACACATATGTATCATCATGCCTaGCTTATATGGTACTATGTTGCCTGTTTCATGACATATACTTTT +
Preference number: 1 (lower is better)
Translates to: MGVHHAGMTHMYHHA*LIWYYVACFMTYTF
Trigger: AAAAGTATATGTCATGAAACAGGCAACATAGTACCATATAAGCCAGGCATGATGATACATATGTGTCATCCCAGCATGGTGTACACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp CACCATGCTGGGATGACACATATGTATCATCATGCCTGGCTTATATaGTACTATGTTGCCTGTTTCATGACATATACTTTTCTAAGAAAA +
Preference number: 1 (lower is better)
Translates to: HHAGMTHMYHHAWLI*YYVACFMTYTFLRK
Trigger: TTTTCTTAGAAAAGTATATGTCATGAAACAGGCAACATAGTACCATATAAGCCAGGCATGATGATACATATGTGTCATCCCAGCATGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 90 bp CAAAGCTCATACTTATGGTCCTCCTGCTTCAGTCTTCTTAGTAGATaGACTTACGTTAATGAAACTTGTTTTACTTGGGTGTTGAATTTA +
Preference number: 1 (lower is better)
Translates to: QSSYLWSSCFSLLSR*TYVNETCFTWVLNL
Trigger: TAAATTCAACACCCAAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGGAGGACCATAAGTATGAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 90 bp TGTCATAGCATTTTCGAAATGCTTATAATGTTAATGACCAATCCATaGCATAAAGTAACTGGCAAGCAAGCAATGACTCAAAAACCTCTG +
Preference number: 1 (lower is better)
Translates to: CHSIFEMLIMLMTNP*HKVTGKQAMTQKPL
Trigger: CAGAGGTTTTTGAGTCATTGCTTGCTTGCCAGTTACTTTATGTCATGGATTGGTCATTAACATTATAAGCATTTCGAAAATGCTATGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCAGCTGGCTGATGCATaGGAACACAGCTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PETWFEWDGGWENAVSWMQLADA*EHSWLE
Trigger: CTCCAGCCAGCTGTGTTCCCATGCATCAGCCAGCTG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
3UTR-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGACAGGTCAGCTGGCTaGTGCATGGGAACACAGCTG +
Preference number: 2 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSADRSAG*CMGTQL
Trigger: CAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTC...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
3UTR-3UTR CCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATGCCATGTGTGTGGCTaGTGCCCTCAGAGATCAGAA +
Preference number: 2 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQCHVCG*CPQRSE
Trigger: TTCTGATCTCTGAGGGCACCAGCCACACACATGGCA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTTCAAAGCACATACGTTaGCTTTCGCATATAGCCCGT +
Preference number: 2 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPSKHIR*LSHIAR
Trigger: ACGGGCTATATGCGAAAGTCAACGTATGTGCTTTGA...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR GCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGCCAGAGATCACTACTaGCACTTGTATACTATGTTG +
Preference number: 2 (lower is better)
Translates to: PETWFEWDGGWENAVSWMARDHY*HLYTML
Trigger: CAACATAGTATACAAGTGGCAGTAGTGATCTCTGGC...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGGGTCTGAGAACAAAGTaGGACGTGGAATGGACTCAC +
Preference number: 2 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWGLRTK*DVEWTH
Trigger: GTGAGTCCATTCCACGTCCCACTTTGTTCTCAGACC...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACACACCTCCCCTCTGGCTaGACTCTGAAGGATGCAGCG +
Preference number: 2 (lower is better)
Translates to: TKYTCKLAYRDPENSELTHLPSG*TLKDAA
Trigger: CGCTGCATCCTTCAGAGTCCAGCCAGAGGGGAGGTG...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 90 bp GGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTaGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGACA +
Preference number: 2 (lower is better)
Translates to: GELRKSFVTRFQRPG*SGMVVGKMQSAGWT
Trigger: TGTCCATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR CAA 90 bp ACTTGTCCATTTGGGAGGAGGGTTATTTTGGTTTATCTGCAAGCTTaGGTGGTGACAGGTATAAGCTTGGCATTTACTGGGGAAGCCGGC +
Preference number: 2 (lower is better)
Translates to: TCPFGRRVILVYLQA*VVTGISLAFTGEAG
Trigger: GCCGGCTTCCCCAGTAAATGCCAAGCTTATACCTGTCACCACCAAAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTCTGGTGCCAGATATATaGCTTTATATCAGCTTGACT +
Preference number: 2 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPLVPDI*LYISLT
Trigger: AGTCAAGCTGATATAAAGTCATATATCTGGCACCAG...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGGCTTTTATACTTTGTaGAGAGCCACATTTTGTGAC +
Preference number: 2 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPGFYTL*RATFCD
Trigger: GTCACAAAATGTGGCTCTTCACAAAGTATAAAAGCC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAACATCTGGGAGCCTGCTaGAAATGCAAATTGCCAAAT +
Preference number: 2 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQHLGAC*KCKLPN
Trigger: ATTTGGCAATTTGCATTTCCAGCAGGCTCCCAGATG...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 90 bp ACGTCAGTCCACCTTGTGCAAACTGCTGTGTCCTTTCCCAAGGACTaGTCCATTTGGGAGGAGGGTTATTTTGGTTTATCTGCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: TSVHLVQTAVSFPKD*SIWEEGYFGLSASF
Trigger: AAAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTTTGCACAAGGTGGACTGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTCCAGAGACCTGGTTTaGGTGGGATGGTGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSSRDLV*VGWWLG
Trigger: TCCCAACCACCATCCCACTCAAACCAGGTCTCTGGA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATCAGATGCTGAAGTTTaGGAACCATTGTTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSDAEV*EPLFFR
Trigger: TCTGAAGAACAATGGTTCTCAAACTTCAGCATCTGA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAATGCAGTCAGCTGGATaGACAGGCAGATGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: TKYTCKLAYRDPENSELTMQSAG*TGRCCR
Trigger: CCTACAGCATCTGCCTGTCCATCCAGCTGACTGCAT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTGAAAATGCAGTCAGCTaGATGGACAGGCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: LGKESLEKALLLGSRDLVENAVS*MDRQML
Trigger: CAGCATCTGCCTGTCCATCCAGCTGACTGCATTTTC...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCATCTGGGGGACCTCAGTaGTTCTATATTTCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASSGGPQ*FYISKP
Trigger: TGGCTTTGAAATATAGAACCACTGAGGTCCCCCAGA...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 90 bp ATGAGGACTCAAAATGGATCAGCCAAGGGCTTCCAAGGGAAAGTGTaGAAAATGACCCATTTGGGAATAACACTGCAAGCAAATGCGCTT +
Preference number: 2 (lower is better)
Translates to: MRTQNGSAKGFQGKV*KMTHLGITLQANAL
Trigger: AAGCGCATTTGCTTGCAGTGTTATTCCCAAATGGGTCATTTTCAACACTTTCCCTTGGAAGCCCTTGGCTGATCCATTTTGAGTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACTTGGAACCCTTAGGTaGATTCAGATGCTGAAGTTT +
Preference number: 2 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASLGTLR*IQMLKF
Trigger: AAACTTCAGCATCTGAATTCACCTAAGGGTTCCAAG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR GCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATTTCTTTTCTTTGTCTaGCTTGGGAACAGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQFLFFV*LGNRSK
Trigger: TTTGCTTCTGTTCCCAAGGCAGACAAAGAAAAGAAA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAGAAAATGCAGTCAGCTaGATGGACAGGCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: TKYTCKLAYRDPENSELTENAVS*MDRQML
Trigger: CAGCATCTGCCTGTCCATCCAGCTGACTGCATTTTC...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGACTATAGAGTGTAAGTaGGCTTGTCTGAAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWTIECK*ACLKSF
Trigger: AAAGCTTTTCAGACAAGCCCACTTACACTCTATAGT...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACGCAGGGCACTTTGTTaGTTAAATGATATACGACAA +
Preference number: 2 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASRRALC*LNDIRQ
Trigger: TTGTCGTATATCATTTAACCAACAAAGTGCCCTGCG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 90 bp CAACAAAGACTAAGGCACCAATTTTCTTTCTTTTCTTTGTCTGCCTaGGGAACAGAAGCAAAGACTCATGGTACACACAGGGTAGTCAGT +
Preference number: 2 (lower is better)
Translates to: QQRLRHQFSFFSLSA*GTEAKTHGTHRVVS
Trigger: ACTGACTACCCTGTGTGTACCATGAGTCTTTGCTTCTGTTCCCAAGGCAGACAAAGAAAAGAAAGAAAATTGGTGCCTTAGTCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAACACCATGTGAGTACTaGGAACCAAACCTGAGTCTT +
Preference number: 2 (lower is better)
Translates to: TKYTCKLAYRDPENSELTTPCEY*EPNLSL
Trigger: AAGACTCAGGTTTGGTTCTCAGTACTCACATGGTGT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR GCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATGGATGGACAGGCAGATaGTGTAGGCATTTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: ERVTNILQGYLYKETGFYGWTGR*CRHFLR
Trigger: CCTAAGGAAATGCCTACAGCATCTGCCTGTCCATCC...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR GCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTCCATCCCACAGTTCTTaGCCCTCCCCTGAGAAGTAT +
Preference number: 2 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLPSHSS*PSPEKY
Trigger: ATACTTCTCAGGGGAGGGGCAAGAACTGTGGGATGG...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCAGACTAACCCAAGGTTaGCTAGGTAAGGAGAGCTTA +
Preference number: 2 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSRLTQG*LGKESL
Trigger: TAAGCTCTCCTTACCTAGTCAACCTTGGGTTAGTCT...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR GCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGTCTGCCTTTATGTCTaGATGCCATGTGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLVCLYV*MPCVWL
Trigger: CAGCCACACACATGGCATGCAGACATAAAGGCAGAC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTTTCTTTGTCTGCCTTaGGAACAGAAGCAAAGACTC +
Preference number: 2 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSFLCLP*EQKQRL
Trigger: GAGTCTTTGCTTCTGTTCCCAAGGCAGACAAAGAAA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGTAAGTGGGCTTGTCTaGAAAGCTTTAGTCATTATT +
Preference number: 2 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSVSGLV*KALVII
Trigger: AATAATGACTAAAGCTTTTCAGACAAGCCCACTTAC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTAGTATGCTCACCAAATaGAGGACTCTGAGTTCCTTT +
Preference number: 2 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSMLTK*RTLSSF
Trigger: AAAGGAACTCAGAGTCCTCCATTTGGTGAGCATACT...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACATTGCAGGTAAGGAATTaGGTACATTCTCATTCTTTT +
Preference number: 2 (lower is better)
Translates to: TKYTCKLAYRDPENSELTLQVRN*VHSHSF
Trigger: AAAAGAATGAGAATGTACCCAATTCCTTACCTGCAA...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAAATTTTGTCTTCATGTaGAAATATGGGGCTATCCTA +
Preference number: 2 (lower is better)
Translates to: TKYTCKLAYRDPENSELTNFVFM*KYGAIL
Trigger: TAGGATAGCCCCATATTTCCACATGAAGACAAAATT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 90 bp GACTCACAAAGGATTGATAGGAGGCTAATGCCAATATTTACAACATaGCAGGTAAGGAATTGGGTACATTCTCATTCTTTTATTCTCAAG +
Preference number: 2 (lower is better)
Translates to: DSQRIDRRLMPIFTT*QVRNWVHSHSFILK
Trigger: CTTGAGAATAAAAGAATGAGAATGTACCCAATTCCTTACCTGCAATGTTGTAAATATTGGCATTAGCCTCCTATCAATCCTTTGTGAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTACATTTTTAGGCACTaGTTAAATGCCATGAATGCT +
Preference number: 2 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSYIFRH*LNAMNA
Trigger: AGCATTCATGGCATTTAACCAGTGCCTAAAAATGTA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR GCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTTCAAGGATATTTCTCTaGAAACAAGTTTGCCCTTTA +
Preference number: 2 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSRIFL*KQVCPL
Trigger: TAAAGGGCAAACTTGTTTGCAGAGAAATATCCTTGA...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp CCACCCCTTCCAGCTGTCTTCCCATCCCACAGTTCTTaGCCCTCCCCTGAGAAGTATGCTCACCAAATGGAG +
Preference number: 3 (lower is better)
Translates to: PPLPAVFPSHSS*PSPEKYAHQME
Trigger: CTCCATTTGGTGAGCATACTTCTCAGGGGAGGGGCAAGAACTGTGGGATGGGAAGACAGCTGGAAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp GTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTaGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: VTGQLADAWEHS*LESSEGLVWKD
Trigger: ATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
3UTR CCA 72 bp CAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTaGGTGGACACAGTCCTGAGGAGAGTGGGATGGCCA +
Preference number: 3 (lower is better)
Translates to: QNASEEKWRQWP*VDTVLRRVGWP
Trigger: TGGCCATCCCACTCTCCTCAGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CTCTGGCTGGACTCTGAAGGATGCAGCGGTCTTTTCTaGAGAGGGCTTGGAGGAGGTCTGAGAACAAAGTGG +
Preference number: 3 (lower is better)
Translates to: LWLDSEGCSGLF*RGLGGGLRTKW
Trigger: CCACTTTGTTCTCAGACCTCCTCCAAGCCCTCTCCAGAAAAGACCGCTGCATCCTTCAGAGTCCAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CACAGTCCTGAGGAGAGTGGGATGGCCACTGTAGCCTaGGTGGTCAAGGGCTTAAGCCTCCTTAAGTCTAAC +
Preference number: 3 (lower is better)
Translates to: HSPEESGMATVA*VVKGLSLLKSN
Trigger: GTTAGACTTAAGGAGGCTTAAGCCCTTGACCACCCAGGCTACAGTGGCCATCCCACTCTCCTCAGGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCCATTCCCTCACAGCTaGACGGACTCGGATGTCAGT +
Preference number: 3 (lower is better)
Translates to: PETWFEWDGGWENAVSWMPFPHS*TDSDVS
Trigger: ACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
3UTR TCA 72 bp GCAGCGGTCTTTTCTGGAGAGGGCTTGGAGGAGGTCTaGGAACAAAGTGGGACGTGGAATGGACTCACAAAG +
Preference number: 3 (lower is better)
Translates to: AAVFSGEGLEEV*EQSGTWNGLTK
Trigger: CTTTGTGAGTCCATTCCACGTCCCACTTTGTTCTCAGACCTCCTCCAAGCCCTCTCCAGAAAAGACCGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp GCCAGCGGCCACCGCTGTGAAGACAGCAACTCACAATaGAAACAGTTCTTGAGATTCCAAGGACCTCGACTG +
Preference number: 3 (lower is better)
Translates to: ASGHRCEDSNSQ*KQFLRFQGPRL
Trigger: CAGTCGAGGTCCTTGGAATCTCAAGAACTGTTTGCATTGTGAGTTGCTGTCTTCACAGCGGTGGCCGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp AGGAGCAGCACATGGTCCTATACACACTGTCCTACCTaGAACGTCAGTCCACCTTGTGCAAACTGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: RSSTWSYTHCPT*NVSPPCANCCV
Trigger: GACACAGCAGTTTGCACAAGGTGGACTGACGTTCCAGGTAGGACAGTGTGTATAGGACCATGTGCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATTCACACTGCAGAGCTaGCTCAGTGCTGACAGACCA +
Preference number: 3 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQFTLQS*LSADRP
Trigger: TGGTCTGTCAGCACTGAGCAAGCTCTGCAGTGTGAA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp TGTCCTACCTGGAACGTCAGTCCACCTTGTGCAAACTaGTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGA +
Preference number: 3 (lower is better)
Translates to: CPTWNVSPPCAN*CVLSQGLVHLG
Trigger: TCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTTTGCACAAGGTGGACTGACGTTCCAGGTAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CCTATGAATCAGGTAGAGGTGTCGAGGAGCAGCACATaGTCCTATACACACTGTCCTACCTGGAACGTCAGT +
Preference number: 3 (lower is better)
Translates to: PMNQVEVSRSST*SYTHCPTWNVS
Trigger: ACTGACGTTCCAGGTAGGACAGTGTGTATAGGACCATGTGCTGCTCCTCGACACCTCTACCTGATTCATAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp AGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATaGACAGGCAGATGCTGTAGGCATTTCCTTAGGATT +
Preference number: 3 (lower is better)
Translates to: SGMVVGKMQSAG*TGRCCRHFLRI
Trigger: AATCCTAAGGAAATGCCTACAGCATCTGCCTGTCCATCCAGCTGACTGCATTTTCCCAACCACCATCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR CCA 72 bp CGTCAGGCTGATCTGAAAGTAAATGATTTCTACCCTTaGGTTCCCAGAGTAGCAGCAGTGGCTTCATCTGGG +
Preference number: 3 (lower is better)
Translates to: RQADLKVNDFYP*VPRVAAVASSG
Trigger: CCCAGATGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAGATCAGCCTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACCAAACCTGAGTCTTTaGAGAGAGCAGCCAGTGCTC +
Preference number: 3 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASPNLSL*REQPVL
Trigger: GAGCACTGGCTGCTCTCTCAAAAGACTCAGGTTTGG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp ACTTTGACTGTCGAGGTCAGCCGGTGCCTTCCTCTCTaGATGATGTTGCAAAGATATAGTGGAAGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: TLTVEVSRCLPL*MMLQRYSGRFC
Trigger: ACAAAACCTTCCACTATATCTTTGCAACATCATGCAGAGAGGAAGGCACCGGCTGACCTCGACAGTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp GGAGTCAGAGATAGTTATGAGACACCATGTGAGTACTaGGAACCAAACCTGAGTCTTTTGAGAGAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GVRDSYETPCEY*EPNLSLLREQP
Trigger: TGGCTGCTCTCTCAAAAGACTCAGGTTTGGTTCTCAGTACTCACATGGTGTCTCATAACTATCTCTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp TCTGGGTTCCTAAGCACATTTGTGTCCTTCTATCACTaGAGGGCTCTGAACTCTGCTTCTTGTTTCACCTAT +
Preference number: 3 (lower is better)
Translates to: SGFLSTFVSFYH*RALNSASCFTY
Trigger: ATAGGTGAAACAAGAAGCAGAGTTCAGAGCCCTGCAGTGATAGAAGGACACAAATGTGCTTAGGAACCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAGGCTATGACTTTGCATaGAGCAATGCTCCATTTGAA +
Preference number: 3 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASGYDFA*SNAPFE
Trigger: TTCAAATGGAGCATTGCTCAATGCAAAGTCATAGCC...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp CAGAAACCTGGGCATTTGTGGCTTGGAACCCTTAGGTaGATTCAGATGCTGAAGTTTGAGAACCATTGTTCT +
Preference number: 3 (lower is better)
Translates to: QKPGHLWLGTLR*IQMLKFENHCS
Trigger: AGAACAATGGTTCTCAAACTTCAGCATCTGAATTCACCTAAGGGTTCCAAGCCACAAATGCCCAGGTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CAAACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTaGGAGGAGGGTTATTTTGGTTTATCTGCAAGCTTT +
Preference number: 3 (lower is better)
Translates to: QTAVSFPKDLSI*EEGYFGLSASF
Trigger: AAAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAAACAAGAAGCCTGTGTaGTTCATCATACCAGGAATT +
Preference number: 3 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASNKKPV*FIIPGI
Trigger: AATTCCTGGTATGATGAACAACACAGGCTTCTTGTT...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp TCAAAAGCTCACTTTGACCTTGATCTTCAGTCTAAGTaGCTAGGGAAAAACTACAGGGCCCATTCAGAGACT +
Preference number: 3 (lower is better)
Translates to: SKAHFDLDLQSK*LGKNYRAHSET
Trigger: AGTCTCTGAATGGGCCCTGTAGTTTTTCCCTAGTCACTTAGACTGAAGATCAAGGTCAAAGTGAGCTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp AATAGAAGTCTTTTGGCATGGGTAGAGAATAAACATTaGGTTCTAGCTCACCTCCTTATCCCCAACATCCCC +
Preference number: 3 (lower is better)
Translates to: NRSLLAWVENKH*VLAHLLIPNIP
Trigger: GGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAATGTTTATTCTCTACCCATGCCAAAAGACTTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CACCATGCTGGGATGACACATATGTATCATCATGCCTaGCTTATATGGTACTATGTTGCCTGTTTCATGACA +
Preference number: 3 (lower is better)
Translates to: HHAGMTHMYHHA*LIWYYVACFMT
Trigger: TGTCATGAAACAGGCAACATAGTACCATATAAGCCAGGCATGATGATACATATGTGTCATCCCAGCATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGATCACTACTGCCACTaGTATACTATGTTGGCATCC +
Preference number: 3 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIDHYCH*YTMLAS
Trigger: GGATGCCAACATAGTATACAAGTGGCAGTAGTGATC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp AACCGACACCATCATTTCACAACTGTATATTGTAGTTaGAGACTTACAATGATTCTATCACAGCCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: NRHHHFTTVYCS*RLTMILSQPQP
Trigger: GGGCTGGGGCTGTGATAGAATCATTGTAAGTCTTCAACTACAATATACAGTTGTGAAATGATGGTGTCGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp ACATCCCCTCACAAACCACACCCAAACTTCCTAGAATaGAAAGTAACCTTTCTCTCTAGGTACCTTTTCCTA +
Preference number: 3 (lower is better)
Translates to: TSPHKPHPNFLE*KVTFLSRYLFL
Trigger: TAGGAAAAGGTACCTAGAGAGAAAGGTTACTTTTCATTCTAGGAAGTTTGGGTGTGGTTTGTGAGGGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp TGTTCTGTAATAATGTTCAAGGCCAGAGATCACTACTaGCACTTGTATACTATGTTGGCATCCAGACTAACC +
Preference number: 3 (lower is better)
Translates to: CSVIMFKARDHY*HLYTMLASRLT
Trigger: GGTTAGTCTGGATGCCAACATAGTATACAAGTGGCAGTAGTGATCTCTGGCCTTGAACATTATTACAGAACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp TGTACACCATGCTGGGATGACACATATGTATCATCATaGCTGGCTTATATGGTACTATGTTGCCTGTTTCAT +
Preference number: 3 (lower is better)
Translates to: CTPCWDDTYVSS*LAYMVLCCLFH
Trigger: ATGAAACAGGCAACATAGTACCATATAAGCCAGGCATGATGATACATATGTGTCATCCCAGCATGGTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTTTCCAAGGGAAAGTGTaGAAAATGACCCATTTGGGA +
Preference number: 3 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIFQGKV*KMTHLG
Trigger: TCCCAAATGGGTCATTTTCAACACTTTCCCTTGGAA...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAATACTTCAGGGGTATTaGTACAAGGAAACTGGCTTT +
Preference number: 3 (lower is better)
Translates to: TKYTCKLAYRDPENSELTILQGY*YKETGF
Trigger: AAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTAT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR GCA 72 bp ATTAAAACTGATACCTTGTTCTACAGGATTTCATGTTaGAGGGCTGGCTTCGAATCCCAGTGTGACTTAAAA +
Preference number: 3 (lower is better)
Translates to: IKTDTLFYRISC*RAGFESQCDLK
Trigger: TTTTAAGTCACACTGGGATTCGAAGCCAGCCCTGCAACATGAAATCCTGTAGAACAAGGTATCAGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CTGGAGGTCACTCTTTTTCCTTATACTCTCCTGTGCTaGGGTTATAGGCATATATCTGGCTTGATTAAAAAT +
Preference number: 3 (lower is better)
Translates to: LEVTLFPYTLLC*GYRHISGLIKN
Trigger: ATTTTTAATCAAGCCAGATATATGCCTATAACCCCAGCACAGGAGAGTATAAGGAAAAAGAGTGACCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR-3UTR CAA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACATTTTCTTTCTTTTCTTaGTCTGCCTTGGGAACAGAA +
Preference number: 3 (lower is better)
Translates to: TKYTCKLAYRDPENSELTFSFFS*SALGTE
Trigger: TTCTGTTCCCAAGGCAGACAAAGAAAAGAAAGAAAA...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp TTGTATACTATGTTGGCATCCAGACTAACCCAAGGTTaGCTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: LYTMLASRLTQG*LGKESLEKALL
Trigger: TAACAAAGCTTTTTCTAAGCTCTCCTTACCTAGTCAACCTTGGGTTAGTCTGGATGCCAACATAGTATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR TCA 72 bp ATTTGTGGCTTGGAACCCTTAGGTGAATTCAGATGCTaGAGTTTGAGAACCATTGTTCTTCAGACAAAAGAA +
Preference number: 3 (lower is better)
Translates to: ICGLEPLGEFRC*SLRTIVLQTKE
Trigger: TTCTTTTGTCTGAAGAACAATGGTTCTCAAACTTCAGCATCTGAATTCACCTAAGGGTTCCAAGCCACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp CACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTaGACTGACAGATTGTATCAAACCAGTTATATTAAC +
Preference number: 3 (lower is better)
Translates to: HLQACLQRPRKQ*TDRLYQTSYIN
Trigger: GTTAATATAACTGGTTTGATACAATCTGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp TACTTATGGTCCTCCTGCTTCAGTCTTCTTAGTAGATaGACTTACGTTAATGAAACTTGTTTTACTTGGGTG +
Preference number: 3 (lower is better)
Translates to: YLWSSCFSLLSR*TYVNETCFTWV
Trigger: CACCCAAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGGAGGACCATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp AGGAGCTATATAACAAGAAACGGATTGCTATCATATTaGTTTCAAAATGCATCAGAGGAAAAGTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: RSYITRNGLLSY*FQNASEEKWRQ
Trigger: CTGCCTCCACTTTTCCTCTGATGCATTTTGAAATCAATATGATAGCAATCCGTTTCTTGTTATATAGCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp ACCTCAAGCAATATACTTTTGGTAAATACAAGCAACTaGAAGCAACACATAAAACCCTGCTCTACTTACTTC +
Preference number: 3 (lower is better)
Translates to: TSSNILLVNTSN*KQHIKPCSTYF
Trigger: GAAGTAAGTAGAGCAGGGTTTTATGTGTTGCTTTCAGTTGCTTGTATTTACCAAAAGTATATTGCTTGAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp AGGCATATATCTGGCTTGATTAAAAATACTGGAATCTaGTCTGTAATTCCTGTTAGCATTTTTCCAGGTCCT +
Preference number: 3 (lower is better)
Translates to: RHISGLIKNTGI*SVIPVSIFPGP
Trigger: AGGACCTGGAAAAATGCTAACAGGAATTACAGATCAGATTCCAGTATTTTTAATCAAGCCAGATATATGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp CTAATGCCAATATTTACAACATTGCAGGTAAGGAATTaGGTACATTCTCATTCTTTTATTCTCAAGACCCAC +
Preference number: 3 (lower is better)
Translates to: LMPIFTTLQVRN*VHSHSFILKTH
Trigger: GTGGGTCTTGAGAATAAAAGAATGAGAATGTACCCAATTCCTTACCTGCAATGTTGTAAATATTGGCATTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CCA 72 bp GTAGTTCAGAGATTACGAAACTCTATTGAGATACTCTaGTACCTTCCTATATTTAAGGCTATTGGTCTCTAT +
Preference number: 3 (lower is better)
Translates to: VVQRLRNSIEIL*YLPIFKAIGLY
Trigger: ATAGAGACCAATAGCCTTAAATATAGGAAGGTACCAGAGTATCTCAATAGAGTTTCGTAATCTCTGAACTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR TCA 72 bp GGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTaGAGAGCCACATTTTGTGACATGCTATATAATTCT +
Preference number: 3 (lower is better)
Translates to: GYLYKETGFYTL*RATFCDMLYNS
Trigger: AGAATTATATAGCATGTCACAAAATGTGGCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCCAGCAGCGCATCACGTaGAGCAGGGGCCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLQQRIT*SRGRAL
Trigger: CAAAGCCCGGCCCCTGCTCCACGTGATGCGCTGCTG...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTAGGTCACCCAGCATCTaGCTGAGCGTTGCACGCACG +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCRSPSI*LSVART
Trigger: CGTGCGTGCAACGCTCAGTCAGATGCTGGGTGACCT...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGGGCCACAGGCCCACTaGGGGTGGGTGCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGGPQAH*GWVQCR
Trigger: CCTGCACTGCACCCACCCTCAGTGGGCCTGTGGCCC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGACCTCAGCTCCAAGGATaGAGGCCAACCCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGPQLQG*RPTPWS
Trigger: GCTCCAAGGGGTTGGCCTTCATCCTTGGAGCTGAGG...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGTGGCTTGAGGGTGGCTaGGAAGGCGTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLWLEGG*EGVLKG
Trigger: GCCCTTCAGGACGCCTTCTCAGCCACCCTCAAGCCA...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCCACTCGGTGCTGGGGTaGGGGATACAGGAGCACTCG +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLHSVLG*GIQEHS
Trigger: CGAGTGCTCCTGTATCCCCCACCCCAGCACCGAGTG...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGACAGCAGTCCGGGTTGTaGCTTCCCATCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGQQSGL*LPISRP
Trigger: AGGCCTGGAGATGGGAAGCCACAACCCGGACTGCTG...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGACACCCTGAACACGTGTaGCCAGCAGTCCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGHPEHV*PAVRVV
Trigger: CACAACCCGGACTGCTGGCCACACGTGTTCAGGGTG...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTAGTGCAGGAGCAGCCTaGGCCCCGGCCGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: HSWLESSEGLVWKDLNLISAGAA*APAVVR
Trigger: TCTGACCACGGCCGGGGCTCAGGCTGCTCCTGCACT...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGCTGAGAAGGCGTCCTaGAGGGCACAGCATGCAAGT +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCAEKAS*RAQHAS
Trigger: ACTTGCATGCTGTGCCCTTCAGGACGCCTTCTCAGC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCCATGCTGGTGCTGGTaGTGGTGCTGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQPCWCW*WCCEQR
Trigger: CCTCTGCTCACAGCACCAGCACCAGCACCAGCATGG...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCCGACTCCATGCTGGTaGTGGTGCTGGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWPTPCW*WCWCCE
Trigger: CTCACAGCACCAGCACCAGCACCAGCATGGAGTCGG...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATCAGAGTCCGACTCCATaGTGGTGCTGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PHSLTDSDVSHVTGQLADQSPTP*WCWCWC
Trigger: GCACCAGCACCAGCACCAGCATGGAGTCGGACTCTG...ATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACATGGCTTCCACTCGGTaGTGGGGTGGGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDMASTR*WGGGYR
Trigger: CCTGTATCCCCCACCCCAGCACCGAGTGGAAGCCAT...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGAACAGTCGGGCGCTGTaGTGGTCTGCCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQNSRAL*WSASWF
Trigger: GAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTT...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGGCAGGGGCCGGGCTTTaGTCCTCACAATCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLAGAGL*SSQSSA
Trigger: TGCTGAGGATTGTGAGGAGCAAAGCCCGGCCCCTGC...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACTCCTCGAGCCAGGCCTaGGAGAAGACCATGAGCACG +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDSSSQA*EKTMST
Trigger: CGTGCTCATGGTCTTCTCCCAGGCCTGGCTCGAGGA...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTTGGATGGAGTGTGGCTaGACCACAGGGGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCWMECG*TTGAVF
Trigger: GAACACAGCCCCTGTGGTCCAGCCACACTCCATCCA...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGAAGAGCCTGTCGGCCTaGGTGGAAAGGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWKSLSA*VERLST
Trigger: GGTGCTCAGCCTTTCCACCCAGGCCGACAGGCTCTT...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGGGTCGCCATCCCGACTaGATCTGTGCAGAGCACACC +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLGRHPD*ICAEHT
Trigger: GGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACC...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTAGCCCACCCTGGAGATaGTTTCTGTGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCSPPWR*FLWAWP
Trigger: TGGCCAAGCCCACAGAAACCATCTCCAGGGTGGGCT...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGCCGCTGAAGCAGTaGGGAGTCAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGWPLKQ*GVRTPG
Trigger: CCCCGGGGTCCTGACTCCCCACTGCTTCAGCGGCCA...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGGGGCCACAGGCCCACTaGGGGTGGGTGCAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWGPQAH*GWVQCR
Trigger: CCTGCACTGCACCCACCCTCAGTGGGCCTGTGGCCC...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGGTCCCCTTGCCTTCCTaGATGGCTGGTGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWVPLPS*MAGDLS
Trigger: GCTCAAGTCACCAGCCATTCAGGAAGGCAAGGGGAC...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGGATGTCTTCTGTGGCTaGTGGATGGTCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWDVFCG*WMVRGG
Trigger: GCCCCCTCTGACCATCCATCAGCCACAGAAGACATC...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGAGAGCTCTAGCTGCATaGTGCGCTCAAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLRALAA*CAQRAG
Trigger: TCCGGCCCTTTGAGCGCATCATGCAGCTAGAGCTCT...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCCGACCCTCAGACTCTaGGGCTCACTCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMPTLRL*GSLRCS
Trigger: GGAGCACCTGAGTGAGCCTCAGAGTCTGAGGGTCGG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGCTCTGGGCCTGCGCTaGAGGAATGGCGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGALGLR*RNGASA
Trigger: GGCAGATGCGCCATTCCTTCAGCGCAGGCCCAGAGC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGTGTTGTCCTCAGGGCTaGCCCAGTAGCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWCCPQG*PSSQLL
Trigger: GAGAAGCTGGCTACTGGGGCAGCCCTGAGGACAACA...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACCCCTTGGAGCTTCCTaGCATCCGACCAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEPLGAS*HPTSQG
Trigger: CCCTTGACTGGTCGGATGGCAGGAAGCTCCAAGGGG...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATCCCGACTGGATCTGTaGAGAGCACACCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGSRLDL*RAHLNQ
Trigger: CTGGTTGAGGTGTGCTCTGCACAGATCCAGTCGGGA...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGAGTCCGACTCCATGCTaGTGCTGGTGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQSPTPC*CWCWCC
Trigger: ACAGCACCAGCACCAGCACCAGCATGGAGTCGGACT...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGTCGGGCGCTGTGCTaGTCTGCCTCCTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDSRALC*SASWFF
Trigger: AAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACT...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGAACTGTGTGGCTTCTCTaGACCACATCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGTVWLL*TTSGWS
Trigger: AGACCAGCCAGATGTGGTTCAGAGAAGCCACACAGT...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGGTCTCCTGCTCTGGGTaGAAGGTGACTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLVSCSG*KVTPLK
Trigger: CTTCAGTGGAGTCACCTTTCACCCAGAGCAGGAGAC...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGTCTCCAGGCCTACGCTaGGAATGGCATCCATGCACA +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWSPGLR*EWHPCT
Trigger: TGTGCATGGATGCCATTCTCAGCGTAGGCCTGGAGA...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACCCGGACGCATCTCTCTaGAGCTTCCTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDPDASL*SFLRIS
Trigger: AGAGATCCTGAGGAAGCTGCAGAGAGATGCGTCCGG...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGACAGCACTCTCCGCTaGCAGCGGAAGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPDSTLR*QRKSAS
Trigger: TGAGGCTGACTTCCGCTGGCAGCGGAGAGTGCTGTC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGAACAGTCGGGCGCTGTaGTGGTCTGCCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMNSRAL*WSASWF
Trigger: GAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGGGAAGCTCAGGCTACTaGCTCCATCAAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLGSSGY*LHQSQE
Trigger: CTCCTGGCTTTGATGGAGGCAGTAGCCTGAGCTTCC...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAAAGACGTGGGCTGTGTaGAGCCACACCCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGKTWAV*SHTPCT
Trigger: GGTGCAGGGGGTGTGGCTGCACACAGCCCACGTCTT...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTAAGACGTGGGCTGTGTaGAGCCACACCCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAKTWAV*SHTPCT
Trigger: GGTGCAGGGGGTGTGGCTGCACACAGCCCACGTCTT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACCCTGCTCCAGGCTCTaGTCCTGGGATGAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEPCSRL*SWDELL
Trigger: TAAGAGCTCATCCCAGGAGCAGAGCCTGGAGCAGGG...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCGAGGTCTCTTCTCCTaGCTCAGCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMRGLFS*LSSSGP
Trigger: AGGCCCAGAGCTGCTGAGGCAGGAGAAGAGACCTCG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGACACTCGGTGCTGGGGTaGGGGATACAGGAGCACTCG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGHSVLG*GIQEHS
Trigger: CGAGTGCTCCTGTATCCCCCACCCCAGCACCGAGTG...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCACCACCTCTTCCACACTaGACAGGGCCAGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPPPLPH*TGPAAG
Trigger: CCCGGCTGCTGGCCCTGTCCAGTGTGGAAGAGGTGG...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACATGGTCAGAGGGGGCTaGGAGATACCATCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDMVRGG*EIPSLK
Trigger: CTTCAGCGATGGTATCTCCCAGCCCCCTCTGACCAT...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCTCCTGGATGGAGTGTaGCTGGACCACAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMLLDGV*LDHRGC
Trigger: ACAGCCCCTGTGGTCCAGCCACACTCCATCCAGGAG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGCTGCTACGCGCACCTaGCAGCCTTCCCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGAATRT*QPSPLK
Trigger: CTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTACACCTGCTGGGCCATaGCCCGGATGCGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSATPAGP*PGCAST
Trigger: AGTACTGGCGCATCCGGGCCATGGCCCAGCAGGTGT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGCCTGCAGGTCCTCATTaGGTGACGGTGTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLPAGPH*VTVSLS
Trigger: TGAAAGTGACACCGTCACTCAATGAGGACCTGCAGG...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTAGGTCACCCAGCATCTaGCTGAGCGTTGCACGCACG +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSARSPSI*LSVART
Trigger: CGTGCGTGCAACGCTCAGTCAGATGCTGGGTGACCT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCTCCTCTGGTGTCGTCTaGCCCAATTCTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLSSGVV*PNSPSK
Trigger: CTTGGAAGGAGAATTGGGTCAGACGACACCAGAGGA...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCACCTGGGAGAAGACCATaGGCACGCCGCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPPGRRP*ARRWSA
Trigger: TGCAGACCAGCGGCGTGCTCATGGTCTTCTCCCAGG...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTAGAGCTCTAGCTGCATaGTGCGCTCAAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPRALAA*CAQRAG
Trigger: TCCGGCCCTTTGAGCGCATCATGCAGCTAGAGCTCT...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGACAGGTCAGCTGGCTaGTGCATGGGAACACAGCTG +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPDRSAG*CMGTQL
Trigger: CAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGACAGAGTCCGACTCCATaGTGGTGCTGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGQSPTP*WCWCWC
Trigger: GCACCAGCACCAGCACCAGCATGGAGTCGGACTCTG...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTATGGCTTCCACTCGGTaGTGGGGTGGGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAMASTR*WGGGYR
Trigger: CCTGTATCCCCCACCCCAGCACCGAGTGGAAGCCAT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCGTAGGACCTTGTCCTaGAGTCCACTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQRRTLS*SPLTGS
Trigger: ACTTCCTGTCAGTGGACTGCAGGACAAGGTCCTACG...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTTGTTGTCCTCAGGGCTaGCCCAGTAGCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPCCPQG*PSSQLL
Trigger: GAGAAGCTGGCTACTGGGGCAGCCCTGAGGACAACA...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACTCGCTGAAGTGGGTGTaGTCCAGTGTACCCACATAC +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDSLKWV*SSVPTY
Trigger: GTATGTGGGTACACTGGAGCACACCCACTTCAGCGA...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGGTGGGTGGTTGGTGTTaGCTTGGACAGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQVGGWC*LGQLDT
Trigger: TGTGTCCAACTGTCCAAGGCAACACCAACCACCCAC...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGACAGACCAATGGCGTaGTTGAAGTTAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCDRPMA*LKLADA
Trigger: GGCATCTGCTAACTTCAAGCACGCCATTGGTCTGTC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGAGCTGGCTGTCATTTATaGAGGCTTGGAGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGAGCHL*RLGASH
Trigger: GTGAGAAGCTCCAAGCCTCCATAAATGACAGCCAGC...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATCTGACACTTTGCCCATaGTCCCCTTGCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PHSLTDSDVSHVTGQLADLTLCP*SPCLPE
Trigger: TTCAGGAAGGCAAGGGGACCATGGGCAAAGTGTCAG...ATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGCATTCATCAGCATCTaGAAGCTCAGGCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCAFISI*KLRLLP
Trigger: AGGCAGTAGCCTGAGCTTCCAGATGCTGATGAATGC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCAACACCTGCTACCGTaGAGTCATCAAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQQHLLP*SHQVSC
Trigger: GCAGGAGACTTGATGACTCCACGGTAGCAGGTGTTG...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAAGATGCAGCTGCCATTTaGGCAAGAGCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEDAAAI*ARAEAQ
Trigger: CTGTGCCTCAGCTCTTGCCCAAATGGCAGCTGCATC...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGTCCATGCACAAGACGTaGGCTGTGTGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMSMHKT*AVCSHT
Trigger: GGTGTGGCTGCACACAGCCCACGTCTTGTGCATGGA...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCATACCATCGCTGAAGTaGGTGTGCTCCAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLIPSLK*VCSSVP
Trigger: GGGTACACTGGAGCACACCCACTTCAGCGATGGTAT...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATCCAGGCTCTGCTCCTaGGATGAGCTCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGSRLCS*DELLNS
Trigger: TGAGTTTAAGAGCTCATCCCAGGAGCAGAGCCTGGA...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCTCCTGGATGGAGTGTaGCTGGACCACAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSALLDGV*LDHRGC
Trigger: ACAGCCCCTGTGGTCCAGCCACACTCCATCCAGGAG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGTCCCGAACAAGCTCCTaGATGGAGTGTGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMSRTSS*MECGWT
Trigger: GGTCCAGCCACACTCCATCCAGGAGCTTGTTCGGGA...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTTTTCTCCTTGCCTCGTaGGGGGCTCACCTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAFLLAS*GAHLRS
Trigger: ACTGCGCAGGTGAGCCCCCCACGAGGCAAGGAGAAA...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATCATTCAGGATCTGATTaGGCAGCTGCTTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: PHSLTDSDVSHVTGQLADHSGSD*AAASHR
Trigger: CCGATGAGAAGCAGCTGCTCAATCAGATCCTGAATG...ATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp GATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGCTGTTAAGCCTTGACTCCTaGATTCCTGTGGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: DVSHVTGQLADAWEHSWLLSLDS*IPVGHL
Trigger: CAGATGCCCCACAGGAATTCAGGAGTCAAGGCTTAA...CAGCCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGAGCAGCTGCTGCACTTaGGTGTCATTCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQSSCCT*VSFKPF
Trigger: GAAAGGCTTGAATGACACTCAAGTGCAGCAGCTGCT...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAATATAGCCTCAGGTTCTaGCACTTTGCCCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEYSLRF*HFAHGP
Trigger: GGGACCATGGGCAAAGTGTCAGAACCTGAGGCTATA...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGAAGAGTGCATCATGCCTaGGCAGAAAGTAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGRVHHA*AESRGK
Trigger: TTTGCCTCTACTTTCTGCTCAGGCATGATGCACTCT...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGGGAGAGCTTCAGGTTaGGCAGTAGGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGGRASG*AVGHSV
Trigger: CACACTGTGCCCTACTGCTCAACCTGAAGCTCTCCC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTTCTCCAGGCCTACGCTaGGAATGGCATCCATGCACA +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPSPGLR*EWHPCT
Trigger: TGTGCATGGATGCCATTCTCAGCGTAGGCCTGGAGA...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGCTCACTCCAGTCAGTaGGAACCTCTGTCAAGATAT +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCAHSSQ*EPLSRY
Trigger: ATATCTTGACAGAGGTTCTCACTGACTGGAGTGAGC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATCCACATCTCCTCCGTaGACACGGGACCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGSTSPP*TRDLLS
Trigger: TGACAGCAGGTCCCGTGTTCACGGAGGAGATGTGGA...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGCTGAGAAGGCGTCCTaGAGGGCACAGCATGCAAGT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGAEKAS*RAQHAS
Trigger: ACTTGCATGCTGTGCCCTTCAGGACGCCTTCTCAGC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACGTTTGGAGTCTTTGGTaGGCACTGGGTGTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDVWSLW*ALGVQH
Trigger: ATGTTGGACACCCAGTGCTCACCAAAGACTCCAAAC...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCATTCCCTCACAGCTTaGCGGACTCGGATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMHSLTA*RTRMSV
Trigger: GACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAAGAGCTTCTGCATTCCTaGCAAAGCATGTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEELLHS*QSMLGQ
Trigger: CTGGCCCAACATGCTTTGGCAGGAATGCAGAAGCTC...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCAGACAGCACTCTCCGCTaGCAGCGGAAGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPDSTLR*QRKSAS
Trigger: TGAGGCTGACTTCCGCTGGCAGCGGAGAGTGCTGTC...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCTGACTTGTTCCCACTaGGCACGGTCTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSALTCSH*ARSPEH
Trigger: GTGCTCTGGAGACCGTGCGCAGTGGGAACAAGTCAG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATCCTCGAGCCAGGCCTaGGAGAAGACCATGAGCACG +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSSSQA*EKTMST
Trigger: CGTGCTCATGGTCTTCTCCCAGGCCTGGCTCGAGGA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGTCAAGTCTCCTGCTCTaGGTGAAAGGTGACTCCACT +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWSSLLL*VKGDST
Trigger: AGTGGAGTCACCTTTCACCCAGAGCAGGAGACTTGA...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATCTTCTTTCTCTTCTTaGACACAGGATGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGSSFSS*TQDAAA
Trigger: GGCAGCTGCATCCTGTGTCCAAGAAGAGAAAGAAGA...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGTGGAGATGGTTTCTGTaGGCTTGGCCACGCATACTA +
Preference number: 4 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQWRWFL*AWPRIL
Trigger: TAGTATGCGTGGCCAAGCCCACAGAAACCATCTCCA...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCAGCTGGCTGATGCATaGGAACACAGCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAQLADA*EHSWLE
Trigger: CTCCAGCCAGCTGTGTTCCCATGCATCAGCCAGCTG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGACAAATCTCTCTTCTaGCAGGAGCTTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLDKSLF*QELLHS
Trigger: GGAATGCAGAAGCTCCTGTCAGAAGAGAGATTTGTC...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATCTTCAATGCCTCCTTTaGTGCATGCTTCTGTCATGC +
Preference number: 4 (lower is better)
Translates to: PHSLTDSDVSHVTGQLADLQCLL*CMLLSC
Trigger: GCATGACAGAAGCATGCATCAAAGGAGGCATTGAAG...ATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTAGCCTTTCCCTTGGCTaGGTTCATCCAGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSASLSLG*VHPEPQ
Trigger: TTGGGGCTCTGGATGAACTCAGCCAAGGGAAAGGCT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAATTCCTGAATGGCTGGTaGCTTGAGCCCATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEFLNGW*LEPILV
Trigger: CACAAGAATGGGCTCAAGTCACCAGCCATTCAGGAA...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGTTCTTTAGCAGTTTaGGAGACAAAGCAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLGSLAV*ETKQRF
Trigger: GAACCGCTGCTTTGTCTCTCAAACTGCTAAAGAACC...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACCTGGGAGAAGACCATaGGCACGCCGCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASPGRRP*ARRWSA
Trigger: TGCAGACCAGCGGCGTGCTCATGGTCTTCTCCCAGG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAATCTGGTTCTGCTCTTTaGTACCCTCAGCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWESGSAL*YPQLQG
Trigger: TCCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGA...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCATTTGGGCAAGAGCTaGGGCACAGTTAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAHLGKS*GTVSSD
Trigger: GTCGCTGCTAACTGTGCCTCAGCTCTTGCCCAAATG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGCTCACCAATGGAGGTaGCCACCTGGTCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGAHQWR*PPGLGH
Trigger: ATGTCCAAGACCAGGTGGTCACCTCCATTGGTGAGC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTGTACTCCTTCACCTCTaGCTTGTTCCCACTGCGCAC +
Preference number: 4 (lower is better)
Translates to: HSWLESSEGLVWKDLNLIVLLHL*LVPTAH
Trigger: GTGCGCAGTGGGAACAAGTCAGAGGTGAAGGAGTAC...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAAGCTGCTCCAACAGGATaGTCCAGACTTCTATCAGAC +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEAAPTG*SRLLSD
Trigger: GTCTGATAGAAGTCTGGATCATCCTGTTGGAGCAGC...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGACCGGACGCATCTCTCTaGAGCTTCCTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGPDASL*SFLRIS
Trigger: AGAGATCCTGAGGAAGCTGCAGAGAGATGCGTCCGG...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGTATTCTCCTGTCTCTaGCGTAACTGTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCVFSCL*RNCKVR
Trigger: CCTGACTTTACAGTTACGGCAGAGACAGGAGAATAC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTTCTGTGAAGCCCCTGTaGAGGTGCATGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSASVKPL*RCMEEE
Trigger: CTCTTCCTCCATGCACCTGCACAGGGGCTTCACAGA...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCATGCCCATGGTCCCCTTaGCTTCCTGAATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPCPWSP*LPEWLV
Trigger: CACCAGCCATTCAGGAAGGCAAGGGGACCATGGGCA...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCACTGACTTGTTCCCACTaGGCACGGTCTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPLTCSH*ARSPEH
Trigger: GTGCTCTGGAGACCGTGCGCAGTGGGAACAAGTCAG...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGAAGCTGTAGCTGCTaGCTGTCATTTATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDRSCSC*LSFMEA
Trigger: AGCCTCCATAAATGACAGCCAGCAGCTACAGCTTCT...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAGCTTCCACTCGGTGCTaGGGTGGGGGATACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASASTRC*GGGYRS
Trigger: GCTCCTGTATCCCCCACCCCAGCACCGAGTGGAAGC...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACATTCTTGTGGTCCTCTaGTGTCGTCTGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDILVVL*CRLTQF
Trigger: GAATTGGGTCAGACGACACCAGAGGACCACAAGAAT...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTCTCTTTCATCATGCCTaGTGCCACGGTTGGTCGCTT +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPLFHHA*CHGWSL
Trigger: AAGCGACCAACCGTGGCACCAGGCATGATGAAAGAG...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACAAGGCTCATGCAGATaGCATCTCGCTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEQGSCR*HLALSG
Trigger: ACCAGAAAGAGCGAGATGCCATCTGCATGAGCCTTG...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCATCCATGCACAAGACGTaGGCTGTGTGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPSMHKT*AVCSHT
Trigger: GGTGTGGCTGCACACAGCCCACGTCTTGTGCATGGA...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGAACAAGCTCCTGGATaGAGTGTGGCTGGACCACAG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGEQAPG*SVAGPQ
Trigger: CTGTGGTCCAGCCACACTCCATCCAGGAGCTTGTTC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAACATGGCGTTCTTTATaGCAGGCAGCCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGTWRSL*QAASTR
Trigger: CCTGGTGGAGGCTGCCTGCCATAAAGAACGCCATGT...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAAAAAGTGGAAGTGAGGTaGCTCACTCCAGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEKVEVR*LTPVSE
Trigger: CTCACTGACTGGAGTGAGCCACCTCACTTCCACTTT...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCTTGGCATGTCCATTTaGTTTCTCATCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCLGMSI*FLIMRQ
Trigger: CTGCCTCATGATGAGAAACCAAATGGACATGCCAAG...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGGCCAGCTTGGTGTCTaGTACTTGGACTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPGQLGV*YLDCLL
Trigger: GAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGTGGACGATTCGGACTaGAAGGAGGGGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMVDDSD*KEGRMK
Trigger: CTTCATTCTCCCCTCCTTCCAGTCCGAATCGTCCAC...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAAGTGCAGGAGCAGCCTaGGCCCCGGCCGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTSAGAA*APAVVR
Trigger: TCTGACCACGGCCGGGGCTCAGGCTGCTCCTGCACT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACCTTGGTCATCTACACTaGAGTTGCTCTCACTATACC +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDLGHLH*SCSHYT
Trigger: GGTATAGTGAGAGCAACTTCAGTGTAGATGACCAAG...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGTCCACATCTCCTCCGTaGACACGGGACCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWSTSPP*TRDLLS
Trigger: TGACAGCAGGTCCCGTGTTCACGGAGGAGATGTGGA...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACTACAGAAGCTGTAGCTaGTGGCTGTCATTTATGGAG +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDYRSCS*WLSFME
Trigger: CTCCATAAATGACAGCCAGCAGCTACAGCTTCTGTA...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAATCAAAGCCAGGAGAGTaGATCATGCCTGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWESKPGE*IMPEQK
Trigger: TTTCTGCTCAGGCATGATGCACTCTCCTGGCTTTGA...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAAGCACGCCGCTGGTCTaGACCTGTTTCATGAACTCT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGSTPLV*TCFMNS
Trigger: AGAGTTCATGAAACAGGTGCAGACCAGCGGCGTGCT...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCAGACTCAATAGAGCTTaGTCCTGCCAAGTCATACAG +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLRLNRA*SCQVIQ
Trigger: CTGTATGACTTGGCAGGACCAAGCTCTATTGAGTCT...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGACCTTCCAAGGTAGTCTaGCCTGTGTCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGPSKVV*PVSVVT
Trigger: TGTCACCACAGACACAGGCCAGACTACCTTGGAAGG...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGCATTCATCAGCATCTaGAAGCTCAGGCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPAFISI*KLRLLP
Trigger: AGGCAGTAGCCTGAGCTTCCAGATGCTGATGAATGC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGACTCTTTCATCATGCCTaGTGCCACGGTTGGTCGCTT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGLFHHA*CHGWSL
Trigger: AAGCGACCAACCGTGGCACCAGGCATGATGAAAGAG...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTCCCAGATGTCTTCTGTaGCTGATGGATGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSWLESSEGLVWKDLNLIPRCLL*LMDGQR
Trigger: CCTCTGACCATCCATCAGCCACAGAAGACATCTGGG...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATCTGTCAAGATATCATaGATGAAGGAAACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGSVKIS*MKETAF
Trigger: GAAGGCCGTTTCCTTCATCCATGATATCTTGACAGA...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAGGTCGCCATCCCGACTaGATCTGTGCAGAGCACACC +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASGRHPD*ICAEHT
Trigger: GGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACC...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACGCGTTAGCAAAGACCTaGATGTTGTCGGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDALAKT*MLSVLR
Trigger: TCTCAATACCGACAACATCCAGGTCTTTGCTAACGC...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCAGAGTAAATCTAAGGTaGGTGGTTGGTGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLRVNLR*VVGVAL
Trigger: CAAGGCAACACCAACCACCCACCTTAGATTTACTCT...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAACCTTCTTCTCTGTCTTaGGGCTGGGAGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQPSSLS*GWEAAS
Trigger: TGATGCTGCCTCCCAGCCCCAAGACAGAGAAGAAGG...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGATGTCGGGGTGTAGGTaGTGCACAGTAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMMSGCR*CTVKPS
Trigger: TGAAGGTTTTACTGTGCATCACCTACACCCCGACAT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATTAAGCCTTGACTCCTaGATTCCTGTGGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGLSLDS*IPVGHL
Trigger: CAGATGCCCCACAGGAATTCAGGAGTCAAGGCTTAA...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAACTGTGTGGCTTCTCTaGACCACATCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQTVWLL*TTSGWS
Trigger: AGACCAGCCAGATGTGGTTCAGAGAAGCCACACAGT...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGGATGTTGTCGGTATTaGGAAAAGCTTCAAACACAT +
Preference number: 4 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCGCCRY*EKLQTH
Trigger: ATGTGTTTGAAGCTTTTCTCAATACCGACAACATCC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGAGTGTAGAAAGCTTTaGATGTGTTCCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPECRKL*MCSTTS
Trigger: GCTGGTGGTGGAACACATTCAAAGCTTTCTACACTC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTGGCTTGAGGGTGGCTaGGAAGGCGTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVWLEGG*EGVLKG
Trigger: GCCCTTCAGGACGCCTTCTCAGCCACCCTCAAGCCA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCATGCCCATGGTCCCCTTaGCTTCCTGAATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASCPWSP*LPEWLV
Trigger: CACCAGCCATTCAGGAAGGCAAGGGGACCATGGGCA...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGGGAAGCTCAGGCTACTaGCTCCATCAAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWGSSGY*LHQSQE
Trigger: CTCCTGGCTTTGATGGAGGCAGTAGCCTGAGCTTCC...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGTGTGTACAAGCTGTCTaGATTCATCAGCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWCVQAV*IHQHLE
Trigger: TTCCAGATGCTGATGAATGCAGACAGCTTGTACACA...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCAAGCACGCCGCTGGTCTaGACCTGTTTCATGAACTCT +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPSTPLV*TCFMNS
Trigger: AGAGTTCATGAAACAGGTGCAGACCAGCGGCGTGCT...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACTGGGCTCTTGGGATTaGCTTTCTTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWELGSWD*LSSFSS
Trigger: AGAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAG...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTCACTCAGGTGCTCCCTaGGGTCATCTTCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVHSGAP*GHLPRG
Trigger: CCCCCTCGGAAGATGACCGCAGGGAGCACCTGAGTG...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTAAGGAATGGCGCATCTaGCCTTGGTCTATGAGATGC +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAKEWRI*PWSMRC
Trigger: GCATCTCATAGACCAAGGGCAGATGCGCCATTCCTT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCGGAGTCTGTCTCCATaGAGACAAATCTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMRSLSP*RQISLL
Trigger: CAGAAGAGAGATTTGTCTCCATGGAGACAGACTCCG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGAGAAGCTGTAGCTGCTaGCTGTCATTTATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMRSCSC*LSFMEA
Trigger: AGCCTCCATAAATGACAGCCAGCAGCTACAGCTTCT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTGCTTCCACTCGGTGCTaGGGTGGGGGATACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVASTRC*GGGYRS
Trigger: GCTCCTGTATCCCCCACCCCAGCACCGAGTGGAAGC...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAACCTTCCAAGGTAGTCTaGCCTGTGTCTGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQPSKVV*PVSVVT
Trigger: TGTCACCACAGACACAGGCCAGACTACCTTGGAAGG...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACCTTTTCTGCCGCCATaGAATACTGATCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEPFLPP*NTDHRN
Trigger: ATTCCTGTGATCAGTATTCCATGGCGGCAGAAAAGG...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGCATCTCGCTCTTTCTaGTTCTGCTCTTTGATACCC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMASRSF*FCSLIP
Trigger: GGGTATCAAAGAGCAGAACCAGAAAGAGCGAGATGC...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCAAGGCTCATGCAGATaGCATCTCGCTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAQGSCR*HLALSG
Trigger: ACCAGAAAGAGCGAGATGCCATCTGCATGAGCCTTG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGATGGTCAGAGGGGGCTaGGAGATACCATCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWMVRGG*EIPSLK
Trigger: CTTCAGCGATGGTATCTCCCAGCCCCCTCTGACCAT...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCATCTGTGGCTGATGGATaGTCAGAGGGGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASSVADG*SEGAGR
Trigger: TCTCCCAGCCCCCTCTGACCATCCATCAGCCACAGA...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGTCTTTGGTGAGCACTaGGTGTCCAACATAAACACC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMVFGEH*VSNINT
Trigger: GGTGTTTATGTTGGACACCCAGTGCTCACCAAAGAC...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGTTGGTGTCTGGTACTTaGACTGTCTTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMLVSGT*TVFSSP
Trigger: GGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAA...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAAGGTGCAGCTCTCTTTaGTGGCTTTGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGRCSSL*WLCICS
Trigger: GGAGCAAATACAAAGCCATCAAAGAGAGCTGCACCT...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTACTGCATTCAGGATCTaGTTGAGCAGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSATAFRI*LSSCFS
Trigger: TGAGAAGCAGCTGCTCAATCAGATCCTGAATGCAGT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGCCGCCATGGAATACTaGTCACAGGAATCAAATTCA +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMAAMEY*SQESNS
Trigger: TGAATTTGATTCCTGTGATCAGTATTCCATGGCGGC...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATCTGGTTCTGCTCTTTaGTACCCTCAGCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSGSAL*YPQLQG
Trigger: TCCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGAGTGTAGAAAGCTTTaGATGTGTTCCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAECRKL*MCSTTS
Trigger: GCTGGTGGTGGAACACATTCAAAGCTTTCTACACTC...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAGTTTGGAGTCTTTGGTaGGCACTGGGTGTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQVWSLW*ALGVQH
Trigger: ATGTTGGACACCCAGTGCTCACCAAAGACTCCAAAC...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACCGGAGAGGGGCCTTTaGCAAACTCTTCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASPERGL*QTLPAE
Trigger: TTCTGCTGGAAGAGTTTGTCAAAGGCCCCTCTCCGG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGACTTTCTTATCTACTTTaGCTTCCTTGGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGLSYLL*LPWGRG
Trigger: CCCCCTTCCCCAAGGAAGTCAAAGTAGATAAGAAAG...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCACTTCTCACACAGAACTaGGAGCACAGAGATGACGTC +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPLLTQN*EHRDDV
Trigger: GACGTCATCTCTGTGCTCGCAGTTCTGTGTGAGAAG...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAACTTCTCACACAGAACTaGGAGCACAGAGATGACGTC +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQLLTQN*EHRDDV
Trigger: GACGTCATCTCTGTGCTCGCAGTTCTGTGTGAGAAG...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGTCGCTGAAGTGGGTGTaGTCCAGTGTACCCACATAC +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWSLKWV*SSVPTY
Trigger: GTATGTGGGTACACTGGAGCACACCCACTTCAGCGA...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGCTTGAAGTTAGCAGATaGCACATCCCAGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMLEVSR*HIPVGM
Trigger: CATTCCTACTGGGATGTGGCATCTGCTAACTTCAAG...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCGGAGTCTGTCTCCATaGAGACAAATCTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSARSLSP*RQISLL
Trigger: CAGAAGAGAGATTTGTCTCCATGGAGACAGACTCCG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGTCATACAGACGCTGTaGGCTCCCAAGTATCTCTTT +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAVIQTL*APKYLF
Trigger: AAAGAGATACTTGGGAGCCCACAGCGTCTGTATGAC...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGTCATACAGACGCTGTaGGCTCCCAAGTATCTCTTT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGVIQTL*APKYLF
Trigger: AAAGAGATACTTGGGAGCCCACAGCGTCTGTATGAC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGCAACACCTGCTACCGTaGAGTCATCAAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWQHLLP*SHQVSC
Trigger: GCAGGAGACTTGATGACTCCACGGTAGCAGGTGTTG...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCCAGCAGCGCATCACGTaGAGCAGGGGCCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSQQRIT*SRGRAL
Trigger: CAAAGCCCGGCCCCTGCTCCACGTGATGCGCTGCTG...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGTCTTTGGTGAGCACTaGGTGTCCAACATAAACACC +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGVFGEH*VSNINT
Trigger: GGTGTTTATGTTGGACACCCAGTGCTCACCAAAGAC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGGTCCACGCCTTTTCTTaGCATGTCCATTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PETWFEWDGGWENAVSWMVHAFS*HVHLVS
Trigger: AGAAACCAAATGGACATGCCAAGAAAAGGCGTGGAC...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGCTGTGATAGTTTCTTaGTTGGTGAGAACCGCGCAA +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAAVIVS*LVRTAQ
Trigger: TTGCGCGGTTCTCACCAACCAAGAAACTATCACAGC...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCATCTCTGTCTTGGGGCTaGGAGGCAGCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASSLSWG*EAASAC
Trigger: ACATGCTGATGCTGCCTCCCAGCCCCAAGACAGAGA...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACAGTTAGCACCATGTTaGTCCACGCCTGGATCTGCG +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASQLAPC*STPGSA
Trigger: CGCAGATCCAGGCGTGGACCAACATGGTGCTAACTG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp GTTTATCTGCAAGCTTTGGTGGTGACAGGTATAAGCTaGGCATTTACTGGGGAAGCCGGCAAAGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VYLQALVVTGIS*AFTGEAGKGAL
Trigger: CAGAGCACCTTTGCCGGCTTCCCCAGTAAATGCCAAGCTTATACCTGTCACCACCAAAGCTTGCAGATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAAGGTGCAGCTCTCTTTaGTGGCTTTGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQRCSSL*WLCICS
Trigger: GGAGCAAATACAAAGCCATCAAAGAGAGCTGCACCT...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACACCATGCTGGTGCTGGTaGTGGTGCTGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTPCWCW*WCCEQR
Trigger: CCTCTGCTCACAGCACCAGCACCAGCACCAGCATGG...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTCCCTGCTCCAGGCTCTaGTCCTGGGATGAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVPCSRL*SWDELL
Trigger: TAAGAGCTCATCCCAGGAGCAGAGCCTGGAGCAGGG...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTCTTGAAGTTAGCAGATaGCACATCCCAGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: HSWLESSEGLVWKDLNLILEVSR*HIPVGM
Trigger: CATTCCTACTGGGATGTGGCATCTGCTAACTTCAAG...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR GCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGTGGAGCAGAACTTGGTaGGAGAGCAAGCTAACCACA +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWWSRTW*ESKLTT
Trigger: TGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCA...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAGTGGCTCCTCCAAGCTaGTCTCCAGGTCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTVAPPS*SPGPGA
Trigger: TGCACCTGGACCTGGAGAGCAGCTTGGAGGAGCCAC...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTCTGCAAGGTAATAGATaGTGCGGGCCACAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVLQGNR*CGPQAH
Trigger: GTGGGCCTGTGGCCCGCACCATCTATTACCTTGCAG...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCACTGACACTTTGCCCATaGTCCCCTTGCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASLTLCP*SPCLPE
Trigger: TTCAGGAAGGCAAGGGGACCATGGGCAAAGTGTCAG...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCCACCTCTTCCACACTaGACAGGGCCAGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYPPLPH*TGPAAG
Trigger: CCCGGCTGCTGGCCCTGTCCAGTGTGGAAGAGGTGG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATCTTCTTTCTCTTCTTaGACACAGGATGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSSFSS*TQDAAA
Trigger: GGCAGCTGCATCCTGTGTCCAAGAAGAGAAAGAAGA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCAGCATCACTGGGCTCTTaGGATTGCCTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPASLGS*DCLSSF
Trigger: GAAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGC...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTCTGTGGCTGATGGATaGTCAGAGGGGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVSVADG*SEGAGR
Trigger: TCTCCCAGCCCCCTCTGACCATCCATCAGCCACAGA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTGGATGGAGTGTGGCTaGACCACAGGGGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVWMECG*TTGAVF
Trigger: GAACACAGCCCCTGTGGTCCAGCCACACTCCATCCA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTAGCCCACCCTGGAGATaGTTTCTGTGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVSPPWR*FLWAWP
Trigger: TGGCCAAGCCCACAGAAACCATCTCCAGGGTGGGCT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR CAA 72 bp GTCGAGGTCAGCCGGTGCCTTCCTCTCTGCATGATGTaGCAAAGATATAGTGGAAGGTTTTGTGGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: VEVSRCLPLCMM*QRYSGRFCGFY
Trigger: GTAGAAACCACAAAACCTTCCACTATATCTTTGCAACATCATGCAGAGAGGAAGGCACCGGCTGACCTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGTCCCCTTGCCTTCCTaGATGGCTGGTGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIVPLPS*MAGDLS
Trigger: GCTCAAGTCACCAGCCATTCAGGAAGGCAAGGGGAC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAGGGAGAGCTTCAGGTTaGGCAGTAGGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTGRASG*AVGHSV
Trigger: CACACTGTGCCCTACTGCTCAACCTGAAGCTCTCCC...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCATCTGCACCTGTTTCATaGACTCTTTCATCATGCCTG +
Preference number: 4 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPSAPVS*TLSSCL
Trigger: CAGGCATGATGAAAGAGTTCATGAAACAGGTGCAGA...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR TCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATCTGAATCTGATTaGGAACAGTTAGCACCATGT +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAGSESD*EQLAPC
Trigger: ACATGGTGCTAACTGTTCTCAATCAGATTCAGATCC...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGTCAAAGCCAGGAGAGTaGATCATGCCTGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWSKPGE*IMPEQK
Trigger: TTTCTGCTCAGGCATGATGCACTCTCCTGGCTTTGA...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAACTGGGCTCTTGGGATTaGCTTTCTTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQLGSWD*LSSFSS
Trigger: AGAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAG...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGCAGGGGCCGGGCTTTaGTCCTCACAATCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSAGAGL*SSQSSA
Trigger: TGCTGAGGATTGTGAGGAGCAAAGCCCGGCCCCTGC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAATCACAGCCAGGTTCTaGATGGAAATGTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQITARF*MEMYLR
Trigger: CCTCAGATACATTTCCATGCAGAACCTGGCTGTGAT...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGCGGTAGAGGTTGGCTaGTCCTCCAATGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIAVEVG*SSNARH
Trigger: GTGTCTGGCATTGGAGGAGCAGCCAACCTCTACCGC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTCCATGCACAGCTTGTaGAGCCTCTTGACCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVSMHSL*SLLTSH
Trigger: GTGGCTGGTCAAGAGGCTGCACAAGCTGTGCATGGA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGGCATCACTGGGCTCTTaGGATTGCCTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWASLGS*DCLSSF
Trigger: GAAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGC...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTGAACAAGCTCCTGGATaGAGTGTGGCTGGACCACAG +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVEQAPG*SVAGPQ
Trigger: CTGTGGTCCAGCCACACTCCATCCAGGAGCTTGTTC...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTACATGGCGTTCTTTATaGCAGGCAGCCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVTWRSL*QAASTR
Trigger: CCTGGTGGAGGCTGCCTGCCATAAAGAACGCCATGT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTTCTGTCAAGATATCATaGATGAAGGAAACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSASVKIS*MKETAF
Trigger: GAAGGCCGTTTCCTTCATCCATGATATCTTGACAGA...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGATGTCATACAGGTTCTaGAGCAGAACTTGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWMSYRF*SRTWCE
Trigger: CTCGCACCAAGTTCTGCTCCAGAACCTGTATGACAT...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCCTGCCTCAGCAGCTCTaGGCCTGCGCTGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSLPQQL*ACAEGM
Trigger: CATTCCTTCAGCGCAGGCCCAGAGCTGCTGAGGCAG...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAAGAGTGCATCATGCCTaGGCAGAAAGTAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASRVHHA*AESRGK
Trigger: TTTGCCTCTACTTTCTGCTCAGGCATGATGCACTCT...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTCATTTGGGCAAGAGCTaGGGCACAGTTAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIHLGKS*GTVSSD
Trigger: GTCGCTGCTAACTGTGCCTCAGCTCTTGCCCAAATG...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGATGTCTTCTGTGGCTaGTGGATGGTCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSDVFCG*WMVRGG
Trigger: GCCCCCTCTGACCATCCATCAGCCACAGAAGACATC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCCGGATGTCAGTCACGTaGCAGGTCAGCTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSRMSVT*QVSWLM
Trigger: CATCAGCCAGCTGACCTGTCACGTGACTGACATCCG...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTCGTAGGACCTTGTCCTaGAGTCCACTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVRRTLS*SPLTGS
Trigger: ACTTCCTGTCAGTGGACTGCAGGACAAGGTCCTACG...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCCCCTTGGAGCTTCCTaGCATCCGACCAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYPLGAS*HPTSQG
Trigger: CCCTTGACTGGTCGGATGGCAGGAAGCTCCAAGGGG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTTCCCGACTGGATCTGTaGAGAGCACACCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERISRLDL*RAHLNQ
Trigger: CTGGTTGAGGTGTGCTCTGCACAGATCCAGTCGGGA...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTCCATCTTCACTGCTTaGCGACTGCTCCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVSIFTA*RLLLKP
Trigger: AGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATTCCTGTGGGGCATCTaGGTTTTCAATTATCGTATT +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGFLWGI*VFNYRI
Trigger: AATACGATAATTGAAAACCCAGATGCCCCACAGGAA...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCAGCAGTCCGGGTTGTaGCTTCCCATCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYQQSGL*LPISRP
Trigger: AGGCCTGGAGATGGGAAGCCACAACCCGGACTGCTG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTATACCATCGCTGAAGTaGGTGTGCTCCAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVIPSLK*VCSSVP
Trigger: GGGTACACTGGAGCACACCCACTTCAGCGATGGTAT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATAAGAGCCTGTCGGCCTaGGTGGAAAGGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYKSLSA*VERLST
Trigger: GGTGCTCAGCCTTTCCACCCAGGCCGACAGGCTCTT...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTGGTTGGTGTTGCCTTaGACAGTTGGACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVWLVLP*TVGHSC
Trigger: GCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGCTGCTACGCGCACCTaGCAGCCTTCCCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLAATRT*QPSPLK
Trigger: CTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp CACTGCAGAGCTTGCTCAGTGCTGACAGACCAACATTaGAGGAAGCATGTGGCCTTTCAACTCAAGGATATT +
Preference number: 4 (lower is better)
Translates to: HCRACSVLTDQH*RKHVAFQLKDI
Trigger: AATATCCTTGAGTTGAAAGGCCACATGCTTCCTCAAATGTTGGTCTGTCAGCACTGAGCAAGCTCTGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCATCTGCACCTGTTTCATaGACTCTTTCATCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASSAPVS*TLSSCL
Trigger: CAGGCATGATGAAAGAGTTCATGAAACAGGTGCAGA...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCCCTCAGCTCCAAGGATaGAGGCCAACCCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTPQLQG*RPTPWS
Trigger: GCTCCAAGGGGTTGGCCTTCATCCTTGGAGCTGAGG...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGCTCACCAATGGAGGTaGCCACCTGGTCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSAHQWR*PPGLGH
Trigger: ATGTCCAAGACCAGGTGGTCACCTCCATTGGTGAGC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGTACTCCTTCACCTCTaGCTTGTTCCCACTGCGCAC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSVLLHL*LVPTAH
Trigger: GTGCGCAGTGGGAACAAGTCAGAGGTGAAGGAGTAC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTCCGACTCCATGCTGGTaGTGGTGCTGGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLPTPCW*WCWCCE
Trigger: CTCACAGCACCAGCACCAGCACCAGCATGGAGTCGG...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCTGCAAGGTAATAGATaGTGCGGGCCACAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYLQGNR*CGPQAH
Trigger: GTGGGCCTGTGGCCCGCACCATCTATTACCTTGCAG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCCACCCTGAACACGTGTaGCCAGCAGTCCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTHPEHV*PAVRVV
Trigger: CACAACCCGGACTGCTGGCCACACGTGTTCAGGGTG...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATTCCCGAACAAGCTCCTaGATGGAGTGTGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYSRTSS*MECGWT
Trigger: GGTCCAGCCACACTCCATCCAGGAGCTTGTTCGGGA...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGCATTTTGTAGATCTTaGCCAATAACTGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGAFCRS*PITENN
Trigger: GTTGTTCTCAGTTATTGGCCAAGATCTACAAAATGC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
3UTR CAA 72 bp GCAAACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTaGGGAGGAGGGTTATTTTGGTTTATCTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: ANCCVLSQGLVH*GGGLFWFICKL
Trigger: AAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp CACCTTGTGCAAACTGCTGTGTCCTTTCCCAAGGACTaGTCCATTTGGGAGGAGGGTTATTTTGGTTTATCT +
Preference number: 4 (lower is better)
Translates to: HLVQTAVSFPKD*SIWEEGYFGLS
Trigger: AGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTTTGCACAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTACTGCATTCAGGATCTaGTTGAGCAGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVTAFRI*LSSCFS
Trigger: TGAGAAGCAGCTGCTCAATCAGATCCTGAATGCAGT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAAGCAGCTGCTGCACTTaGGTGTCATTCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTSSCCT*VSFKPF
Trigger: GAAAGGCTTGAATGACACTCAAGTGCAGCAGCTGCT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTTTCCTGAATGGCTGGTaGCTTGAGCCCATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIFLNGW*LEPILV
Trigger: CACAAGAATGGGCTCAAGTCACCAGCCATTCAGGAA...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTATAGCCTCAGGTTCTaGCACTTTGCCCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSYSLRF*HFAHGP
Trigger: GGGACCATGGGCAAAGTGTCAGAACCTGAGGCTATA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATTCTGCCCTTGGTCTATaGGATGCTGTGGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYSALGL*DAVAAE
Trigger: TTCAGCGGCCACAGCATCTCATAGACCAAGGGCAGA...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGAGCTTCTGCATTCCTaGCAAAGCATGTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSELLHS*QSMLGQ
Trigger: CTGGCCCAACATGCTTTGGCAGGAATGCAGAAGCTC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGTGGGTGGTTGGTGTTaGCTTGGACAGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSVGGWC*LGQLDT
Trigger: TGTGTCCAACTGTCCAAGGCAACACCAACCACCCAC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTAGGCGTGCCCGCCATTaGCTTTTCTCCTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLRRARH*LFSLPR
Trigger: ACGAGGCAAGGAGAAAAGGCAATGGCGGGCACGCCT...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTAGTCCGACTCCATGCTaGTGCTGGTGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSPTPC*CWCWCC
Trigger: ACAGCACCAGCACCAGCACCAGCATGGAGTCGGACT...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCAGTCGGGCGCTGTGCTaGTCTGCCTCCTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTSRALC*SASWFF
Trigger: AAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACT...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTGCATCTCGCTCTTTCTaGTTCTGCTCTTTGATACCC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVASRSF*FCSLIP
Trigger: GGGTATCAAAGAGCAGAACCAGAAAGAGCGAGATGC...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTTCCAGGCTCTGCTCCTaGGATGAGCTCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERISRLCS*DELLNS
Trigger: TGAGTTTAAGAGCTCATCCCAGGAGCAGAGCCTGGA...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTGGTTGGTGTTGCCTTaGACAGTTGGACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSWLVLP*TVGHSC
Trigger: GCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCACTGGCGGTAGAGGTTaGCTGCTCCTCCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTTGGRG*LLLQCQ
Trigger: CTGGCATTGGAGGAGCAGCCAACCTCTACCGCCAGT...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCCCTGCGCTGAAGGAATaGCGCATCTGCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTPALKE*RICPWS
Trigger: AGACCAAGGGCAGATGCGCCATTCCTTCAGCGCAGG...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp TTTGGGAGGAGGGTTATTTTGGTTTATCTGCAAGCTTaGGTGGTGACAGGTATAAGCTTGGCATTTACTGGG +
Preference number: 4 (lower is better)
Translates to: FGRRVILVYLQA*VVTGISLAFTG
Trigger: CCCAGTAAATGCCAAGCTTATACCTGTCACCACCAAAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp TTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTaGGTTTATCTGCAAGCTTTGGTGGTGACAGGTATA +
Preference number: 4 (lower is better)
Translates to: FPRTCPFGRRVI*VYLQALVVTGI
Trigger: TATACCTGTCACCACCAAAGCTTGCAGATAAACCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGACAAATCTCTCTTCTaGCAGGAGCTTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIDKSLF*QELLHS
Trigger: GGAATGCAGAAGCTCCTGTCAGAAGAGAGATTTGTC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCAGCCTTTCCCTTGGCTaGGTTCATCCAGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTSLSLG*VHPEPQ
Trigger: TTGGGGCTCTGGATGAACTCAGCCAAGGGAAAGGCT...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAGGTTCTTTAGCAGTTTaGGAGACAAAGCAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTGSLAV*ETKQRF
Trigger: GAACCGCTGCTTTGTCTCTCAAACTGCTAAAGAACC...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCGTCTCCTGCTCTGGGTaGAAGGTGACTCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTVSCSG*KVTPLK
Trigger: CTTCAGTGGAGTCACCTTTCACCCAGAGCAGGAGAC...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTTCTGTGAAGCCCCTGTaGAGGTGCATGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSVKPL*RCMEEE
Trigger: CTCTTCCTCCATGCACCTGCACAGGGGCTTCACAGA...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGACAGACCAATGGCGTaGTTGAAGTTAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSDRPMA*LKLADA
Trigger: GGCATCTGCTAACTTCAAGCACGCCATTGGTCTGTC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCCCACCACTCTTTCTTaGGGCCAGGATCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYPTTLS*GQDPSS
Trigger: AGAAGAAGGATCCTGGCCGCAAGAAAGAGTGGTGGG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGCAAATCTTGTTCCCTaGACTCTCCCACCACTCTTT +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIANLVP*TLPPLF
Trigger: AAAGAGTGGTGGGAGAGTGCAGGGAACAAGATTTGC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTGTCAGCGGCCATTGTaGAAATCTTGTTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSCQRPL*KSCSLH
Trigger: GTGCAGGGAACAAGATTTGCACAATGGCCGCTGACA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCATTCCTGTGGGGCATCTaGGTTTTCAATTATCGTATT +
Preference number: 4 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASFLWGI*VFNYRI
Trigger: AATACGATAATTGAAAACCCAGATGCCCCACAGGAA...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTACTCCTGAATTCCTGTaGGGCATCTGGGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVTPEFL*GIWVFN
Trigger: ATTGAAAACCCAGATGCCCCACAGGAATTCAGGAGT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGCTGGCTGTCATTTATaGAGGCTTGGAGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSAGCHL*RLGASH
Trigger: GTGAGAAGCTCCAAGCCTCCATAAATGACAGCCAGC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTCCTTTTCTGCCGCCATaGAATACTGATCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVPFLPP*NTDHRN
Trigger: ATTCCTGTGATCAGTATTCCATGGCGGCAGAAAAGG...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGATGCAGCTGCCATTTaGGCAAGAGCTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLDAAAI*ARAEAQ
Trigger: CTGTGCCTCAGCTCTTGCCCAAATGGCAGCTGCATC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp GTAATAATGTTCAAGGCCAGAGATCACTACTGCCACTaGTATACTATGTTGGCATCCAGACTAACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VIMFKARDHYCH*YTMLASRLTQG
Trigger: ACCTTGGGTTAGTCTGGATGCCAACATAGTATACAAGTGGCAGTAGTGATCTCTGGCCTTGAACATTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp AAGGGCTTCCAAGGGAAAGTGTTGAAAATGACCCATTaGGGAATAACACTGCAAGCAAATGCGCTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KGFQGKVLKMTH*GITLQANALGN
Trigger: ATTTCCAAGCGCATTTGCTTGCAGTGTTATTCCCAAATGGGTCATTTTCAACACTTTCCCTTGGAAGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCCCTGCAGGTCCTCATTaGGTGACGGTGTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTPAGPH*VTVSLS
Trigger: TGAAAGTGACACCGTCACTCAATGAGGACCTGCAGG...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCCTTCAATGCCTCCTTTaGTGCATGCTTCTGTCATGC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSLQCLL*CMLLSC
Trigger: GCATGACAGAAGCATGCATCAAAGGAGGCATTGAAG...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTTCCTCTGGTGTCGTCTaGCCCAATTCTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSSGVV*PNSPSK
Trigger: CTTGGAAGGAGAATTGGGTCAGACGACACCAGAGGA...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAGCCGCCATGGAATACTaGTCACAGGAATCAAATTCA +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTAAMEY*SQESNS
Trigger: TGAATTTGATTCCTGTGATCAGTATTCCATGGCGGC...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGCTCACTCCAGTCAGTaGGAACCTCTGTCAAGATAT +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSAHSSQ*EPLSRY
Trigger: ATATCTTGACAGAGGTTCTCACTGACTGGAGTGAGC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCTCCATCTTCACTGCTTaGCGACTGCTCCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTSIFTA*RLLLKP
Trigger: AGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGA...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTCATTTATGGAGGCTTaGAGCTTCTCACACAGAACT +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVSFMEA*SFSHRT
Trigger: AGTTCTGTGTGAGAAGCTCCAAGCCTCCATAAATGA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACAAGACTCAATAGAGCTTaGTCCTGCCAAGTCATACAG +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTRLNRA*SCQVIQ
Trigger: CTGTATGACTTGGCAGGACCAAGCTCTATTGAGTCT...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCCCCAGATGTCTTCTGTaGCTGATGGATGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTPRCLL*LMDGQR
Trigger: CCTCTGACCATCCATCAGCCACAGAAGACATCTGGG...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTAGACTTGACTTCACCTaGCATTGTCAGAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: LGKESLEKALLLGSRDLVRLDFT*HCQRVI
Trigger: GATTACTCTCTGACAATGCCAGGTGAAGTCAAGTCT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGCGTTAGCAAAGACCTaGATGTTGTCGGTATTGAGA +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIALAKT*MLSVLR
Trigger: TCTCAATACCGACAACATCCAGGTCTTTGCTAACGC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGCTCTTGAAGGTAAGTaGCTCCTCCAAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLALEGK*LLQAAL
Trigger: GAGAGCAGCTTGGAGGAGCCACTTACCTTCAAGAGC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATATGTCGGGGTGTAGGTaGTGCACAGTAAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYMSGCR*CTVKPS
Trigger: TGAAGGTTTTACTGTGCATCACCTACACCCCGACAT...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGCTGCTCCAACAGGATaGTCCAGACTTCTATCAGAC +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLAAPTG*SRLLSD
Trigger: GTCTGATAGAAGTCTGGATCATCCTGTTGGAGCAGC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCTACAGAAGCTGTAGCTaGTGGCTGTCATTTATGGAG +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSYRSCS*WLSFME
Trigger: CTCCATAAATGACAGCCAGCAGCTACAGCTTCTGTA...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR GCA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACATGTGTACAAGCTGTCTaGATTCATCAGCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: TKYTCKLAYRDPENSELTCVQAV*IHQHLE
Trigger: TTCCAGATGCTGATGAATGCAGACAGCTTGTACACA...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTTCAAGTCTCCTGCTCTaGGTGAAAGGTGACTCCACT +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSSLLL*VKGDST
Trigger: AGTGGAGTCACCTTTCACCCAGAGCAGGAGACTTGA...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTAAAGTGGAAGTGAGGTaGCTCACTCCAGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLKVEVR*LTPVSE
Trigger: CTCACTGACTGGAGTGAGCCACCTCACTTCCACTTT...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCTGGAGATGGTTTCTGTaGGCTTGGCCACGCATACTA +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTWRWFL*AWPRIL
Trigger: TAGTATGCGTGGCCAAGCCCACAGAAACCATCTCCA...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCATTCTTGTGGTCCTCTaGTGTCGTCTGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTILVVL*CRLTQF
Trigger: GAATTGGGTCAGACGACACCAGAGGACCACAAGAAT...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCAGACTTGACTTCACCTaGCATTGTCAGAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSRLDFT*HCQRVI
Trigger: GATTACTCTCTGACAATGCCAGGTGAAGTCAAGTCT...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCTTGGCATGTCCATTTaGTTTCTCATCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYLGMSI*FLIMRQ
Trigger: CTGCCTCATGATGAGAAACCAAATGGACATGCCAAG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTTCATCAGCTTTGAGATaGTCTTGTCAGCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLSSALR*SCQRPL
Trigger: CAATGGCCGCTGACAAGACCATCTCAAAGCTGATGA...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTCTTGGTCATCTACACTaGAGTTGCTCTCACTATACC +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLLGHLH*SCSHYT
Trigger: GGTATAGTGAGAGCAACTTCAGTGTAGATGACCAAG...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTGCATTTTGTAGATCTTaGCCAATAACTGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIAFCRS*PITENN
Trigger: GTTGTTCTCAGTTATTGGCCAAGATCTACAAAATGC...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTAGAGTAAATCTAAGGTaGGTGGTTGGTGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLRVNLR*VVGVAL
Trigger: CAAGGCAACACCAACCACCCACCTTAGATTTACTCT...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp TTAACTGAAGTACTACTCACTGGCTATGACTTTGCATaGAGCAATGCTCCATTTGAAACTATAAACACCTCC +
Preference number: 4 (lower is better)
Translates to: LTEVLLTGYDFA*SNAPFETINTS
Trigger: GGAGGTGTTTATAGTTTCAAATGGAGCATTGCTCAATGCAAAGTCATAGCCAGTGAGTAGTACTTCAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp AACCTAGATTGGCTTTCAAGTCCTCTCTCCCACTTTTaGGCAACAGCTATTGAAACAGTTTGGAAAAATTAT +
Preference number: 4 (lower is better)
Translates to: NLDWLSSPLSHF*ATAIETVWKNY
Trigger: ATAATTTTTCCAAACTGTTTCAATAGCTGTTGCCAAAAAGTGGGAGAGAGGACTTGAAAGCCAATCTAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR TCA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGGATGTTGTCGGTATTaGGAAAAGCTTCAAACACAT +
Preference number: 4 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLGCCRY*EKLQTH
Trigger: ATGTGTTTGAAGCTTTTCTCAATACCGACAACATCC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CCA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATAAGAGACACTTTTCTTaGCATGTCCATTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ERVTNILQGYLYKETGFYKRHFS*HVHLVS
Trigger: AGAAACCAAATGGACATGCCAAGAAAAGTGTCTCTT...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp GCTAATGCCAATATTTACAACATTGCAGGTAAGGAATaGGGTACATTCTCATTCTTTTATTCTCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: ANANIYNIAGKE*GTFSFFYSQDP
Trigger: TGGGTCTTGAGAATAAAAGAATGAGAATGTACCCAATTCCTTACCTGCAATGTTGTAAATATTGGCATTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp TTTCAAGTCCTCTCTCCCACTTTTTGGCAACAGCTATaGAAACAGTTTGGAAAAATTATTTGTAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: FQVLSPTFWQQL*KQFGKIICRDG
Trigger: TCCATCTCTACAAATAATTTTTCCAAACTGTTTCAATAGCTGTTGCCAAAAAGTGGGAGAGAGGACTTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
3UTR CAA 72 bp AAGGAGCTATATAACAAGAAACGGATTGCTATCATATaGATTTCAAAATGCATCAGAGGAAAAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KELYNKKRIAII*ISKCIRGKVEA
Trigger: TGCCTCCACTTTTCCTCTGATGCATTTTGAAATCAATATGATAGCAATCCGTTTCTTGTTATATAGCTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp GCCTCCACCAGGTGCGGGGCCACGAGGCTCCAGCAGCGCATCACGTaGAGCAGGGGCCGGGCTTTGCTCCTCACAATCCTCAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: ASTRCGATRLQQRIT*SRGRALLLTILSMA
Trigger: TGCCATGCTGAGGATTGTGAGGAGCAAAGCCCGGCCCCTGCTCCACGTGATGCGCTGCTGGAGCCTCGTGGCCCCGCACCTGGTGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp CCGGATGCGCCAGTACTCAGCCTCAGCACTCGGGGAGGAAGAGGGTaGTGCTACGCGCACCTGGCAGCCTTCCCCACTGAAGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PDAPVLSLSTRGGRG*CYAHLAAFPTEALC
Trigger: ACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCTCTTCCTCCCCGAGTGCTGAGGCTGAGTACTGGCGCATCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp CTGGGAGGCAGCATCAGCATGTCCCCACTGCCGACCCTCAGACTCTaGGGCTCACTCAGGTGCTCCCTGCGGTCATCTTCCGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LGGSISMSPLPTLRL*GSLRCSLRSSSEGV
Trigger: CACCCCCTCGGAAGATGACCGCAGGGAGCACCTGAGTGAGCCTCAGAGTCTGAGGGTCGGCAGTGGGGACATGCTGATGCTGCCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 90 bp GATGCGCCAGTACTCAGCCTCAGCACTCGGGGAGGAAGAGGGTGCTaGTACGCGCACCTGGCAGCCTTCCCCACTGAAGCCCTCTGTACC +
Preference number: 5 (lower is better)
Translates to: DAPVLSLSTRGGRGC*YAHLAAFPTEALCT
Trigger: GGTACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCTCTTCCTCCCCGAGTGCTGAGGCTGAGTACTGGCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp TCAGCCTCAGCACTCGGGGAGGAAGAGGGTGCTGCTACGCGCACCTaGCAGCCTTCCCCACTGAAGCCCTCTGTACCACCGTGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SASALGEEEGAATRT*QPSPLKPSVPPWKQ
Trigger: CTGCTTCCACGGTGGTACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCTCTTCCTCCCCGAGTGCTGAGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp GGGAGGAAGAGGGTGCTGCTACGCGCACCTGGCAGCCTTCCCCACTaGAGCCCTCTGTACCACCGTGGAAGCAGCCTAGCAGGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GRKRVLLRAPGSLPH*SPLYHRGSSLAGPS
Trigger: TGAAGGACCTGCTAGGCTGCTTCCACGGTGGTACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCTCTTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp AGTCCGAGGTCCGGCCACGGCTACATTCCCGAACAAGCTCCTGGATaGAGTGTGGCTGGACCACAGGGGCTGTGTTCAGGGAAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SPRSGHGYIPEQAPG*SVAGPQGLCSGKAP
Trigger: AGGGGCCTTCCCTGAACACAGCCCCTGTGGTCCAGCCACACTCCATCCAGGAGCTTGTTCGGGAATGTAGCCGTGGCCGGACCTCGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CGGAAGTCCGAGGTCCGGCCACGGCTACATTCCCGAACAAGCTCCTaGATGGAGTGTGGCTGGACCACAGGGGCTGTGTTCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RKSEVRPRLHSRTSS*MECGWTTGAVFREG
Trigger: GCCTTCCCTGAACACAGCCCCTGTGGTCCAGCCACACTCCATCCAGGAGCTTGTTCGGGAATGTAGCCGTGGCCGGACCTCGGACTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp ACGCGCACCTGGCAGCCTTCCCCACTGAAGCCCTCTGTACCACCGTaGAAGCAGCCTAGCAGGTCCTTCACTGGCTTGAGGGTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TRTWQPSPLKPSVPP*KQPSRSFTGLRVAE
Trigger: CTCAGCCACCCTCAAGCCAGTGAAGGACCTGCTAGGCTGCTTCCACGGTGGTACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp GAGCGACGGCAGGCGTGCCCGCCATTGCCTTTTCTCCTTGCCTCGTaGGGGGCTCACCTGCGCAGTCTCCTCAAAGATGTCTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: ERRQACPPLPFLLAS*GAHLRSLLKDVFIL
Trigger: GAGGATGAAGACATCTTTGAGGAGACTGCGCAGGTGAGCCCCCCACGAGGCAAGGAGAAAAGGCAATGGCGGGCACGCCTGCCGTCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp GTGGCCAGCAGTCCGGGTTGTGGCTTCCCATCTCCAGGCCTACGCTaGGAATGGCATCCATGCACAAGACGTGGGCTGTGTGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: VASSPGCGFPSPGLR*EWHPCTRRGLCAAT
Trigger: TGTGGCTGCACACAGCCCACGTCTTGTGCATGGATGCCATTCTCAGCGTAGGCCTGGAGATGGGAAGCCACAACCCGGACTGCTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp TGTCGGTCGCGTCATCAAAGAGCCTGTCGGCCTGGGTGGAAAGGCTaGGCACCACCTTGGCAGCACTGTTCCCACTCAGACTACCTCCCC +
Preference number: 5 (lower is better)
Translates to: CRSRHQRACRPGWKG*APPWQHCSHSDYLP
Trigger: GGGGAGGTAGTCTGAGTGGGAACAGTGCTGCCAAGGTGGTGCTCAGCCTTTCCACCCAGGCCGACAGGCTCTTTGATGACGCGACCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp TGCAGCCTCTTGACCAGCCACACCCAGTCTGCATTGCTTACTGGCTaGACACTGAGCGACGGCAGGCGTGCCCGCCATTGCCTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CSLLTSHTQSALLTG*TLSDGRRARHCLFS
Trigger: GGAGAAAAGGCAATGGCGGGCACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp CTGCGCACGGTCTCCAGAGCACTGAACAGGGGTCGCCATCCCGACTaGATCTGTGCAGAGCACACCTCAACCAGCTCACCAATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LRTVSRALNRGRHPD*ICAEHTSTSSPMEV
Trigger: CACCTCCATTGGTGAGCTGGTTGAGGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACCCCTGTTCAGTGCTCTGGAGACCGTGCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp CCTTCACCTCTGACTTGTTCCCACTGCGCACGGTCTCCAGAGCACTaGACAGGGGTCGCCATCCCGACTGGATCTGTGCAGAGCACACCT +
Preference number: 5 (lower is better)
Translates to: PSPLTCSHCARSPEH*TGVAIPTGSVQSTP
Trigger: AGGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACCCCTGTTCAGTGCTCTGGAGACCGTGCGCAGTGGGAACAAGTCAGAGGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp GGTCTCCAGAGCACTGAACAGGGGTCGCCATCCCGACTGGATCTGTaGAGAGCACACCTCAACCAGCTCACCAATGGAGGTGACCACCTG +
Preference number: 5 (lower is better)
Translates to: GLQSTEQGSPSRLDL*RAHLNQLTNGGDHL
Trigger: CAGGTGGTCACCTCCATTGGTGAGCTGGTTGAGGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACCCCTGTTCAGTGCTCTGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CTTGTGCAGCCTCTTGACCAGCCACACCCAGTCTGCATTGCTTACTaGCTGCACACTGAGCGACGGCAGGCGTGCCCGCCATTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LVQPLDQPHPVCIAY*LHTERRQACPPLPF
Trigger: AAAAGGCAATGGCGGGCACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGGCTGCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp TCTCCCACCACTCTTTCTTGCGGCCAGGATCCTTCTTCTCTGTCTTaGGGCTGGGAGGCAGCATCAGCATGTCCCCACTGCCGACCCTCA +
Preference number: 5 (lower is better)
Translates to: SPTTLSCGQDPSSLS*GWEAASACPHCRPS
Trigger: TGAGGGTCGGCAGTGGGGACATGCTGATGCTGCCTCCCAGCCCCAAGACAGAGAAGAAGGATCCTGGCCGCAAGAAAGAGTGGTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCATGAGGGGAAGGCTGTaGTCCTCAGGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLMRGRL*SSGLPQ
Trigger: CTGGGGCAGCCCTGAGGACAACAGCCTTCCCCTCAT...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS TCA 90 bp CCTAGCAGGTCCTTCACTGGCTTGAGGGTGGCTGAGAAGGCGTCCTaGAGGGCACAGCATGCAAGTCTCCACATCTCCTCCGTGAACACG +
Preference number: 5 (lower is better)
Translates to: PSRSFTGLRVAEKAS*RAQHASLHISSVNT
Trigger: CGTGTTCACGGAGGAGATGTGGAGACTTGCATGCTGTGCCCTTCAGGACGCCTTCTCAGCCACCCTCAAGCCAGTGAAGGACCTGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp AGAGCAGGGCAGAGGCTTTTCCAGATGAGGTCTGTGAAGCCCCTGTaGAGGTGCATGGAGGAAGAGGAGCTGCTGAGCACGGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: RAGQRLFQMRSVKPL*RCMEEEELLSTERM
Trigger: CATCCTCTCCGTGCTCAGCAGCTCCTCTTCCTCCATGCACCTGCACAGGGGCTTCACAGACCTCATCTGGAAAAGCCTCTGCCCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp ATGCTGATGTCAGGGCTCCTCTCATTGCCTGACTCCCATGGAGTGTaGTCCGAAGACAGCACTCTCCGCTGCCAGCGGAAGTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: MLMSGLLSLPDSHGV*SEDSTLRCQRKSAS
Trigger: TGAGGCTGACTTCCGCTGGCAGCGGAGAGTGCTGTCTTCGGAGCACACTCCATGGGAGTCAGGCAATGAGAGGAGCCCTGACATCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp GGCACAGCATGCAAGTCTCCACATCTCCTCCGTGAACACGGGACCTaGTGTCACGAGGACGTACCTAATGCAGGAACAGCCCACCCTGGA +
Preference number: 5 (lower is better)
Translates to: GTACKSPHLLREHGT*CHEDVPNAGTAHPG
Trigger: TCCAGGGTGGGCTGTTCCTGCATTAGGTACGTCCTCGTGACAGCAGGTCCCGTGTTCACGGAGGAGATGTGGAGACTTGCATGCTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp ACCACTCTTTCTTGCGGCCAGGATCCTTCTTCTCTGTCTTGGGGCTaGGAGGCAGCATCAGCATGTCCCCACTGCCGACCCTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: TTLSCGQDPSSLSWG*EAASACPHCRPSDS
Trigger: AGAGTCTGAGGGTCGGCAGTGGGGACATGCTGATGCTGCCTCCCAGCCCCAAGACAGAGAAGAAGGATCCTGGCCGCAAGAAAGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp TGTCCAGGCCACCTAGGGTTTCCAGGGCCCAGGTGCAGCTCTCTTTaGTGGCTTTGTATTTGCTCCCGGACGCATCTCTCTGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: CPGHLGFPGPRCSSL*WLCICSRTHLSAAS
Trigger: GGAAGCTGCAGAGAGATGCGTCCGGGAGCAAATACAAAGCCATCAAAGAGAGCTGCACCTGGGCCCTGGAAACCCTAGGTGGCCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp CGGTTGGTCGCTTCCGGTAGTAGTCACCGTGGGAGAGCTTCAGGTTaGGCAGTAGGGCACAGTGTGCCGCTGTGTACAAGCTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RLVASGSSHRGRASG*AVGHSVPLCTSCLH
Trigger: ATGCAGACAGCTTGTACACAGCGGCACACTGTGCCCTACTGCTCAACCTGAAGCTCTCCCACGGTGACTACTACCGGAAGCGACCAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp TCCTCGAGCCAGGCCTGGGAGAAGACCATGAGCACGCCGCTGGTCTaGACCTGTTTCATGAACTCTTTCATCATGCCTGGTGCCACGGTT +
Preference number: 5 (lower is better)
Translates to: SSSQAWEKTMSTPLV*TCFMNSFIMPGATV
Trigger: AACCGTGGCACCAGGCATGATGAAAGAGTTCATGAAACAGGTGCAGACCAGCGGCGTGCTCATGGTCTTCTCCCAGGCCTGGCTCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp TGGATGGTCAGAGGGGGCTGGGAGATACCATCGCTGAAGTGGGTGTaGTCCAGTGTACCCACATACTCACACACCCTGAACACGTGTGGC +
Preference number: 5 (lower is better)
Translates to: WMVRGGWEIPSLKWV*SSVPTYSHTLNTCG
Trigger: GCCACACGTGTTCAGGGTGTGTGAGTATGTGGGTACACTGGAGCACACCCACTTCAGCGATGGTATCTCCCAGCCCCCTCTGACCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp ACATACTCACACACCCTGAACACGTGTGGCCAGCAGTCCGGGTTGTaGCTTCCCATCTCCAGGCCTACGCTGAGAATGGCATCCATGCAC +
Preference number: 5 (lower is better)
Translates to: TYSHTLNTCGQQSGL*LPISRPTLRMASMH
Trigger: GTGCATGGATGCCATTCTCAGCGTAGGCCTGGAGATGGGAAGCCACAACCCGGACTGCTGGCCACACGTGTTCAGGGTGTGTGAGTATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTGGCCAGCAGTCCGGGTaGTGGCTTCCCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HSWLESSEGLVWKDLNLIGQQSG*WLPISR
Trigger: CCTGGAGATGGGAAGCCACAACCCGGACTGCTGGCC...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGAGCAGGGGCCGGGCTTaGCTCCTCACAATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: PETWFEWDGGWENAVSWMSRGRA*LLTILS
Trigger: GCTGAGGATTGTGAGGAGCAAAGCCCGGCCCCTGCT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGTGGGTGGTTGGTGTaGCCTTGGACAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLGGWLV*PWTVGH
Trigger: GTGTCCAACTGTCCAAGGCAACACCAACCACCCACC...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS TCA 90 bp TCAATTTCCCCAAGGAGGCCAGAGCTCCCAGATGTCTTCTGTGGCTaGTGGATGGTCAGAGGGGGCTGGGAGATACCATCGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SISPRRPELPDVFCG*WMVRGGWEIPSLKW
Trigger: CCACTTCAGCGATGGTATCTCCCAGCCCCCTCTGACCATCCATCAGCCACAGAAGACATCTGGGAGCTCTGGCCTCCTTGGGGAAATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp GCCTTTTCCCATAGAGTAGTCCCCAACCAGGTACTCCTTCACCTCTaGCTTGTTCCCACTGCGCACGGTCTCCAGAGCACTGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: AFSHRVVPNQVLLHL*LVPTAHGLQSTEQG
Trigger: CCCCTGTTCAGTGCTCTGGAGACCGTGCGCAGTGGGAACAAGTCAGAGGTGAAGGAGTACCTGGTTGGGGACTACTCTATGGGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp ACTGCGCTGGTGGCAGCTGCACGTGTAGGTCTCGATGCACACCTCTaGGATCTTCAGAACGGCACTCCCATTCATGTCAAATGTCGGGGT +
Preference number: 5 (lower is better)
Translates to: TALVAAARVGLDAHL*DLQNGTPIHVKCRG
Trigger: ACCCCGACATTTGACATGAATGGGAGTGCCGTTCTGAAGATCGCAGAGGTGTGCATCGAGACCTACACGTGCAGCTGCCACCAGCGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp CACCAGCTCGCAGGACAGACCAATGGCGTGCTTGAAGTTAGCAGATaGCACATCCCAGTAGGAATGGTCCTTGTGGCTACGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: HQLAGQTNGVLEVSR*HIPVGMVLVATEEP
Trigger: TGGCTCCTCCGTAGCCACAAGGACCATTCCTACTGGGATGTGGCATCTGCTAACTTCAAGCACGCCATTGGTCTGTCCTGCGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CTCCAATGCCAGACACTTTCTTCAGCAGGCATTTCAGCCCTGGGCTaGTGTCGAATTCCCGGGCAGTCCTATAGGAGTCCAGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LQCQTLSSAGISALG*CRIPGQSYRSPAAG
Trigger: ACCTGCTGCTGGACTCCTATAGGACTGCCCGGGAATTCGACACCAGCCCAGGGCTGAAATGCCTGCTGAAGAAAGTGTCTGGCATTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp TGCTCCTCCAATGCCAGACACTTTCTTCAGCAGGCATTTCAGCCCTaGGCTGGTGTCGAATTCCCGGGCAGTCCTATAGGAGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CSSNARHFLQQAFQP*AGVEFPGSPIGVQQ
Trigger: CTGCTGGACTCCTATAGGACTGCCCGGGAATTCGACACCAGCCCAGGGCTGAAATGCCTGCTGAAGAAAGTGTCTGGCATTGGAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp TTCTCCTGTCTCTGCCGTAACTGTAAAGTCAGGTCACCCAGCATCTaGCTGAGCGTTGCACGCACGGCAGTGTTGATACTGCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: FSCLCRNCKVRSPSI*LSVARTAVLILRWW
Trigger: CCACCAGCGCAGTATCAACACTGCCGTGCGTGCAACGCTCAGTCAGATGCTGGGTGACCTGACTTTACAGTTACGGCAGAGACAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp ACAGTCGGGCGCTGTGCTGGTCTGCCTCCTGGTTCTTTAGCAGTTTaGGAGACAAAGCAGCGGTTCGAAGGGACCGATGGCCTATGTAGT +
Preference number: 5 (lower is better)
Translates to: TVGRCAGLPPGSLAV*ETKQRFEGTDGLCS
Trigger: ACTACATAGGCCATCGGTCCCTTCGAACCGCTGCTTTGTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp ATGCAACACCTGCTACCGTGGAGTCATCAAGTCTCCTGCTCTGGGTaGAAGGTGACTCCACTGAAGCTGACGCCATCAACTGGCCACCGA +
Preference number: 5 (lower is better)
Translates to: MQHLLPWSHQVSCSG*KVTPLKLTPSTGHR
Trigger: TCGGTGGCCAGTTGATGGCGTCAGCTTCAGTGGAGTCACCTTTCACCCAGAGCAGGAGACTTGATGACTCCACGGTAGCAGGTGTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp GAGCTGACAGGACTGAGCGTGATCGAAGTTGTTTGGAGTCTTTGGTaGGCACTGGGTGTCCAACATAAACACCTGCTGGGCCATGGCCCG +
Preference number: 5 (lower is better)
Translates to: ELTGLSVIEVVWSLW*ALGVQHKHLLGHGP
Trigger: CGGGCCATGGCCCAGCAGGTGTTTATGTTGGACACCCAGTGCTCACCAAAGACTCCAAACAACTTCGATCACGCTCAGTCCTGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp CGGGGTAGGAGGCCCTCAAGGGACTGTATAAACAGTCGGGCGCTGTaGTGGTCTGCCTCCTGGTTCTTTAGCAGTTTGAGAGACAAAGCA +
Preference number: 5 (lower is better)
Translates to: RGRRPSRDCINSRAL*WSASWFFSSLRDKA
Trigger: TGCTTTGTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTTTATACAGTCCCTTGAGGGCCTCCTACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp GGTAGGAGGCCCTCAAGGGACTGTATAAACAGTCGGGCGCTGTGCTaGTCTGCCTCCTGGTTCTTTAGCAGTTTGAGAGACAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: GRRPSRDCINSRALC*SASWFFSSLRDKAA
Trigger: CGCTGCTTTGTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTTTATACAGTCCCTTGAGGGCCTCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CTGCTCTGGGTGAAAGGTGACTCCACTGAAGCTGACGCCATCAACTaGCCACCGATTGCGCTACTCTCTAGACCATCGATATCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLWVKGDSTEADAIN*PPIALLSRPSISVS
Trigger: GCTCACCGATATCGATGGTCTAGAGAGTAGCGCAATCGGTGGCCAGTTGATGGCGTCAGCTTCAGTGGAGTCACCTTTCACCCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CTGGAAGGAGGGGAGAATGAAGAACGGGTCGCTCTTGAAGGTAAGTaGCTCCTCCAAGCTGCTCTCCAGGTCCAGGTGCATCTGGATGTA +
Preference number: 5 (lower is better)
Translates to: LEGGENEERVALEGK*LLQAALQVQVHLDV
Trigger: TACATCCAGATGCACCTGGACCTGGAGAGCAGCTTGGAGGAGCCACTTACCTTCAAGAGCGACCCGTTCTTCATTCTCCCCTCCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCACCTGCAGGTCCTCATaGAGTGACGGTGTCACTTTC +
Preference number: 5 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLTCRSS*SDGVTF
Trigger: GAAAGTGACACCGTCACTCAATGAGGACCTGCAGGT...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTGGCATCACTGGGCTCTaGGGATTGCCTTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCGITGL*GLPFFF
Trigger: AAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGCC...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTAGGCTGAGCACCACCTaGGCAGCACTGTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSARLSTT*AALFPL
Trigger: GAGTGGGAACAGTGCTGCCAAGGTGGTGCTCAGCCT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAAGCAGGGGCCGGGCTTaGCTCCTCACAATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSRGRA*LLTILS
Trigger: GCTGAGGATTGTGAGGAGCAAAGCCCGGCCCCTGCT...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGTCCTTCACCTCTGACTaGTTCCCACTGCGCACGGTC +
Preference number: 5 (lower is better)
Translates to: PETWFEWDGGWENAVSWMSFTSD*FPLRTV
Trigger: GACCGTGCGCAGTGGGAACAAGTCAGAGGTGAAGGA...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAACAGGCGTGCCCGCCATaGCCTTTTCTCCTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQQACPP*PFLLAS
Trigger: CGAGGCAAGGAGAAAAGGCAATGGCGGGCACGCCTG...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp GAAGCAGCTGCTGCACTTGAGTGTCATTCAAGCCTTTCCCTTGGCTaGGTTCATCCAGAGCCCCAAGCAAGGTGCAGACACAGGACACAG +
Preference number: 5 (lower is better)
Translates to: EAAAALECHSSLSLG*VHPEPQARCRHRTQ
Trigger: CTGTGTCCTGTGTCTGCACCTTGCTTGGGGCTCTGGATGAACTCAGCCAAGGGAAAGGCTTGAATGACACTCAAGTGCAGCAGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp ATGGCTGGTGACTTGAGCCCATTCTTGTGGTCCTCTGGTGTCGTCTaGCCCAATTCTCCTTCCAAGGTAGTCTGGCCTGTGTCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: MAGDLSPFLWSSGVV*PNSPSKVVWPVSVV
Trigger: CACCACAGACACAGGCCAGACTACCTTGGAAGGAGAATTGGGTCAGACGACACCAGAGGACCACAAGAATGGGCTCAAGTCACCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp ACACTTTGCCCATGGTCCCCTTGCCTTCCTGAATGGCTGGTGACTTaGGCCCATTCTTGTGGTCCTCTGGTGTCGTCTGACCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: TLCPWSPCLPEWLVT*AHSCGPLVSSDPIL
Trigger: GAGAATTGGGTCAGACGACACCAGAGGACCACAAGAATGGGCTCAAGTCACCAGCCATTCAGGAAGGCAAGGGGACCATGGGCAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp AAGTATCTCTTTCATGATCTTGATGGCTTCCACTCGGTGCTGGGGTaGGGGATACAGGAGCACTCGGTGATAGAGGGACTGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: KYLFHDLDGFHSVLG*GIQEHSVIEGLEHW
Trigger: CCAGTGCTCCAGTCCCTCTATCACCGAGTGCTCCTGTATCCCCCACCCCAGCACCGAGTGGAAGCCATCAAGATCATGAAAGAGATACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CTGCACCTGTTTCATGAACTCTTTCATCATGCCTGGTGCCACGGTTaGTCGCTTCCGGTAGTAGTCACCGTGGGAGAGCTTCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: LHLFHELFHHAWCHG*SLPVVVTVGELQVE
Trigger: CTCAACCTGAAGCTCTCCCACGGTGACTACTACCGGAAGCGACCAACCGTGGCACCAGGCATGATGAAAGAGTTCATGAAACAGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp AAACTCAATTTCCCCAAGGAGGCCAGAGCTCCCAGATGTCTTCTGTaGCTGATGGATGGTCAGAGGGGGCTGGGAGATACCATCGCTGAA +
Preference number: 5 (lower is better)
Translates to: KLNFPKEARAPRCLL*LMDGQRGLGDTIAE
Trigger: TTCAGCGATGGTATCTCCCAGCCCCCTCTGACCATCCATCAGCCACAGAAGACATCTGGGAGCTCTGGCCTCCTTGGGGAAATTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp GTTCTGCATGGAAATGTATCTGAGGAAGCCGGCCAGCTTGGTGTCTaGTACTTGGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: VLHGNVSEEAGQLGV*YLDCLLFSRRGAFD
Trigger: GTCAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATACATTTCCATGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp TGCGCAGTCTCCTCAAAGATGTCTTCATCCTCCGACGAGCACTGTTaGGAGGAATCCGAGCTCCTCTCCTCCTCTTCGAATAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: CAVSSKMSSSSDEHC*EESELLSSSSNSTF
Trigger: GAAGGTGCTATTCGAAGAGGAGGAGAGGAGCTCGGATTCCTCCCAACAGTGCTCGTCGGAGGATGAAGACATCTTTGAGGAGACTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCTTGATGGCTTTGTATTaGCTCCCGGACGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLLMALY*LPDASL
Trigger: GAGAGATGCGTCCGGGAGCAAATACAAAGCCATCAA...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGATGAGGGGAAGGCTGTaGTCCTCAGGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWMRGRL*SSGLPQ
Trigger: CTGGGGCAGCCCTGAGGACAACAGCCTTCCCCTCAT...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCTTCTGGTTCTGCTCTTaGATACCCTCAGCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLFWFCS*IPSAPR
Trigger: CCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGAA...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTACTGGGCTCTTGGGATaGCCTTTCTTCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RHGPLFPAIPSQLDGLGCTGLLG*PFFFLF
Trigger: GAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAGT...ACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATCCTTCACCTCTGACTaGTTCCCACTGCGCACGGTC +
Preference number: 5 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGSFTSD*FPLRTV
Trigger: GACCGTGCGCAGTGGGAACAAGTCAGAGGTGAAGGA...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCAAGGTCCTTCACTGGCTaGAGGGTGGCTGAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPRSFTG*RVAEKA
Trigger: CGCCTTCTCAGCCACCCTCAAGCCAGTGAAGGACCT...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGACGTGATCGAAGTTGTTaGGAGTCTTTGGTGAGCACT +
Preference number: 5 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGRDRSC*ESLVST
Trigger: AGTGCTCACCAAAGACTCCAAACAACTTCGATCACG...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGACAGTTAGCACCATGTaGGTCCACGCCTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: PETWFEWDGGWENAVSWMTVSTM*VHAWIC
Trigger: GCAGATCCAGGCGTGGACCAACATGGTGCTAACTGT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 90 bp AGCCCATCAAGGCTCATGCAGATGGCATCTCGCTCTTTCTGGTTCTaGTCTTTGATACCCTCAGCTCCAAGGATGAAGGCCAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: SPSRLMQMASRSFWF*SLIPSAPRMKANPL
Trigger: CAAGGGGTTGGCCTTCATCCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGAAAGAGCGAGATGCCATCTGCATGAGCCTTGATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CTGAGCACGGAGAGGATGCATTCCAGGTACAGAAGCTGTAGCTGCTaGCTGTCATTTATGGAGGCTTGGAGCTTCTCACACAGAACTGCG +
Preference number: 5 (lower is better)
Translates to: LSTERMHSRYRSCSC*LSFMEAWSFSHRTA
Trigger: CGCAGTTCTGTGTGAGAAGCTCCAAGCCTCCATAAATGACAGCCAGCAGCTACAGCTTCTGTACCTGGAATGCATCCTCTCCGTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp TCAAGGGACTGTATAAACAGTCGGGCGCTGTGCTGGTCTGCCTCCTaGTTCTTTAGCAGTTTGAGAGACAAAGCAGCGGTTCGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRDCINSRALCWSAS*FFSSLRDKAAVRRD
Trigger: GTCCCTTCGAACCGCTGCTTTGTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTTTATACAGTCCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TGTCATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCTCCTGCCAAAGCATGTaGGGCCAGCTTCACATTTTT +
Preference number: 5 (lower is better)
Translates to: CHRHGPLFPAIPSQLDGLSCQSM*GQLHIF
Trigger: AAAAATGTGAAGCTGGCCCAACATGCTTTGGCAGGA...GAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp TCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAACACAGCTGGTTCTTCTTTCTCTTCTaGGACACAGGATGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SDVSHVTGQLADAWEHSWFFFLF*DTGCSC
Trigger: GCAGCTGCATCCTGTGTCCAAGAAGAGAAAGAAGAA...CCAGCTGTGTTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGACCTCCCCCAGCCCCTaGACAAATTTCATAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PETWFEWDGGWENAVSWMTSPSP*TNFIRH
Trigger: GTGCCTTATGAAATTTGTCAAGGGGCTGGGGGAGGT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGAGTGGTTGGTGTTGCCTaGGACAGTTGGACACAGCTG +
Preference number: 5 (lower is better)
Translates to: FQRPGLSGMVVGKMQSAGVVGVA*DSWTQL
Trigger: CAGCTGTGTCCAACTGTCCAAGGCAACACCAACCAC...TCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAAAGACCAATGGCGTGCTaGAAGTTAGCAGATGCCACA +
Preference number: 5 (lower is better)
Translates to: LTDSDVSHVTGQLADAWERPMAC*KLADAT
Trigger: TGTGGCATCTGCTAACTTCAAGCACGCCATTGGTCT...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp CATAGACACGGCCCACTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATCCTTCAGCATGGTGTaGATCATACTCTCATACCTG +
Preference number: 5 (lower is better)
Translates to: HRHGPLFPAIPSQLDGLGSFSMV*IILSYL
Trigger: CAGGTATGAGAGTATGATCAACACCATGCTGAAGGA...TCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAGTGGGCCGTGTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGTTCTGGAGCAGAACTaGGTGCGAGAGCAAGCTAAC +
Preference number: 5 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPVLEQN*VREQAN
Trigger: GTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAAC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTGGCTGTGATAGTTTCTaGGTTGGTGAGAACCGCGCA +
Preference number: 5 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPGCDSF*VGENRA
Trigger: TGCGCGGTTCTCACCAACCAAGAAACTATCACAGCC...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAAGCTCCATGCACAGCTaGTGCAGCCTCTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSSMHS*CSLLTS
Trigger: GCTGGTCAAGAGGCTGCACAAGCTGTGCATGGAGCT...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGCGGAGAAGCCACCTGTaGATGGGGTGGACGATTCGG +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWRRSHL*MGWTIR
Trigger: CCGAATCGTCCACCCCATCAACAGGTGGCTTCTCCG...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTCCATTCCCTCACAGCTaGACGGACTCGGATGTCAGT +
Preference number: 5 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAPFPHS*TDSDVS
Trigger: ACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGG...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp GCTCTCACTATACCTAGATCCGTAGGACCTTGTCCTGCAGTCCACTaGCAGGAAGTTGGTGATATCGGGGTAAGGGACTGTGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ALTIPRSVGPCPAVH*QEVGDIGVRDCVAS
Trigger: AGAAGCCACACAGTCCCTTACCCCGATATCACCAACTTCCTGTCAGTGGACTGCAGGACAAGGTCCTACGGATCTAGGTATAGTGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp GTGAGAACCTCTGTCAAGATATCATGGATGAAGGAAACGGCCTTCTaGGACACATGGCGTTCTTTATGGCAGGCAGCCTCCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VRTSVKISWMKETAF*DTWRSLWQAASTRC
Trigger: GCACCTGGTGGAGGCTGCCTGCCATAAAGAACGCCATGTGTCTCAGAAGGCCGTTTCCTTCATCCATGATATCTTGACAGAGGTTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp ATGGAAATGTATCTGAGGAAGCCGGCCAGCTTGGTGTCTGGTACTTaGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTTGACAAACTCT +
Preference number: 5 (lower is better)
Translates to: MEMYLRKPASLVSGT*TVFSSPGEGPLTNS
Trigger: AGAGTTTGTCAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATACATTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCATGGGAAGCTTCAATGCCTCCTTaGATGCATGCTTCTGTCATG +
Preference number: 5 (lower is better)
Translates to: LTDSDVSHVTGQLADAWEASMPP*MHASVM
Trigger: CATGACAGAAGCATGCATCAAAGGAGGCATTGAAGC...TTCCCATGCATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp GATTTGAGTCCTCTAAGTGATGATGTCATAGACACGGCCCACTCTTCCCAGCCATGGGAGAGCTTCAGGTaGAGCAGTAGGGCACAGTGT +
Preference number: 5 (lower is better)
Translates to: DLSPLSDDVIDTAHSSQPWESFR*SSRAQC
Trigger: ACACTGTGCCCTACTGCTCAACCTGAAGCTCTCCCA...TGGCTGGGAAGAGTGGGCCGTGTCTATGACATCATCACTTAGAGGACTCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp CCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGCTGGCTGATGCAAAGACCTGGATGTaGTCGGTATTGAGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: PHSLTDSDVSHVTGQLADAKTWM*SVLRKA
Trigger: AGCTTTTCTCAATACCGACAACATCCAGGTCTTTGC...ATCAGCCAGCTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGGGTGGGTGGTTGGTGTaGCCTTGGACAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWGGWLV*PWTVGH
Trigger: GTGTCCAACTGTCCAAGGCAACACCAACCACCCACC...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGAGCTTTGAGATGGTCTaGTCAGCGGCCATTGTGCAA +
Preference number: 5 (lower is better)
Translates to: PETWFEWDGGWENAVSWMSFEMV*SAAIVQ
Trigger: TTGCACAATGGCCGCTGACAAGACCATCTCAAAGCT...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp GCAGCAGGTCAAATATCACAGCCAGGTTCTGCATGGAAATGTATCTaGGGAAGCCGGCCAGCTTGGTGTCTGGTACTTGGACTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: AAGQISQPGSAWKCI*GSRPAWCLVLGLSS
Trigger: AGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATACATTTCCATGCAGAACCTGGCTGTGATATTTGACCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 90 bp TGTACAAGCTGTCTGCATTCATCAGCATCTGGAAGCTCAGGCTACTaGCTCCATCAAAGCCAGGAGAGTGCATCATGCCTGAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: CTSCLHSSASGSSGY*LHQSQESASCLSRK
Trigger: CTTTCTGCTCAGGCATGATGCACTCTCCTGGCTTTGATGGAGGCAGTAGCCTGAGCTTCCAGATGCTGATGAATGCAGACAGCTTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp GGTGGTTGGTGTTGCCTTGGACAGTTGGACACAGCTGCTGTTAGCTaGTCCAACAGGATGATCCAGACTTCTATCAGACCAGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: GGWCCLGQLDTAAVS*SNRMIQTSIRPVSS
Trigger: TGATGACACTGGTCTGATAGAAGTCTGGATCATCCTGTTGGAGCAGCTAACAGCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp AAAGTAAATGTTAAAGCTCATGGCCGACTGGCGGTAGAGGTTGGCTaGTCCTCCAATGCCAGACACTTTCTTCAGCAGGCATTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: KVNVKAHGRLAVEVG*SSNARHFLQQAFQP
Trigger: GGGCTGAAATGCCTGCTGAAGAAAGTGTCTGGCATTGGAGGAGCAGCCAACCTCTACCGCCAGTCGGCCATGAGCTTTAACATTTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 90 bp GAATCCGAGCTCCTCTCCTCCTCTTCGAATAGCACCTTCTTTACTTaGTCGGCTGTGATAGTTTCTTGGTTGGTGAGAACCGCGCAAACC +
Preference number: 5 (lower is better)
Translates to: ESELLSSSSNSTFFT*SAVIVSWLVRTAQT
Trigger: GGTTTGCGCGGTTCTCACCAACCAAGAAACTATCACAGCCGAGCAAGTAAAGAAGGTGCTATTCGAAGAGGAGGAGAGGAGCTCGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp TTCCTTAGCCCATCAAGGCTCATGCAGATGGCATCTCGCTCTTTCTaGTTCTGCTCTTTGATACCCTCAGCTCCAAGGATGAAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FLSPSRLMQMASRSF*FCSLIPSAPRMKAN
Trigger: GTTGGCCTTCATCCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGAAAGAGCGAGATGCCATCTGCATGAGCCTTGATGGGCTAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp GCGCTCAAAGGGCCGGAAGAGTGCTTCGTTAAAGTGGAAGTGAGGTaGCTCACTCCAGTCAGTGAGAACCTCTGTCAAGATATCATGGAT +
Preference number: 5 (lower is better)
Translates to: ALKGPEECFVKVEVR*LTPVSENLCQDIMD
Trigger: ATCCATGATATCTTGACAGAGGTTCTCACTGACTGGAGTGAGCCACCTCACTTCCACTTTAACGAAGCACTCTTCCGGCCCTTTGAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp GAGGGGCCTTTGACAAACTCTTCCAGCAGAATGTCATACAGGTTCTaGAGCAGAACTTGGTGCGAGAGCAAGCTAACCACAATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: EGPLTNSSSRMSYRF*SRTWCESKLTTISL
Trigger: CAGGGAGATTGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTTTGTCAAAGGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTCTCTCTTTGATGGCTTaGTATTTGCTCCCGGACGCA +
Preference number: 5 (lower is better)
Translates to: HSWLESSEGLVWKDLNLILSLMA*YLLPDA
Trigger: TGCGTCCGGGAGCAAATACAAAGCCATCAAAGAGAG...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATCAGCCAGGGAACAGTaGTCTGACCCAATGTCTGAC +
Preference number: 5 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSAREQ*SDPMSD
Trigger: GTCAGACATTGGGTCAGACAACTGTTCCCTGGCTGA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TCAAAATGCATCAGAGGAAAAGTGGAGGCAGTGGCCGTGGGTGGACACAGTCCTCGTGATCGAAGTTGTTaGGAGTCTTTGGTGAGCACT +
Preference number: 5 (lower is better)
Translates to: SKCIRGKVEAVAVGGHSPRDRSC*ESLVST
Trigger: AGTGCTCACCAAAGACTCCAAACAACTTCGATCACG...AGGACTGTGTCCACCCACGGCCACTGCCTCCACTTTTCCTCTGATGCATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CACAGCTGGCTGGAGAGCAGTGAAGGTCTGGTCTGGAAGGATCTGAATCTGATTGGTCCACGCCTTTTCTaGGCATGTCCATTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: HSWLESSEGLVWKDLNLIGPRLF*ACPFGF
Trigger: GAAACCAAATGGACATGCCAAGAAAAGGCGTGGACC...AATCAGATTCAGATCCTTCCAGACCAGACCTTCACTGCTCTCCAGCCAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS TCA 90 bp ATGATGCGCTCAAAGGGCCGGAAGAGTGCTTCGTTAAAGTGGAAGTaGGGTGGCTCACTCCAGTCAGTGAGAACCTCTGTCAAGATATCA +
Preference number: 5 (lower is better)
Translates to: MMRSKGRKSASLKWK*GGSLQSVRTSVKIS
Trigger: TGATATCTTGACAGAGGTTCTCACTGACTGGAGTGAGCCACCTCACTTCCACTTTAACGAAGCACTCTTCCGGCCCTTTGAGCGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp GACAGGACTGATTCAATTCCATCTTCACTGCTTGCCGACTGCTCCTaGAGCCTTCGTGGCAAACTGGCAAGTCGCCCACTAAGGAATATT +
Preference number: 5 (lower is better)
Translates to: DRTDSIPSSLLADCS*SLRGKLASRPLRNI
Trigger: AATATTCCTTAGTGGGCGACTTGCCAGTTTGCCACGAAGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGAATTGAATCAGTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp TGTCTGGTACTTGGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTTaGCAAACTCTTCCAGCAGAATGTCATACAGGTTCTGGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: CLVLGLSSLLPERGL*QTLPAECHTGSGAE
Trigger: TTCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTTTGTCAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 90 bp ACAGGACACAGCAGCGTAGCAGGCTTCAATGCCTCCTTTGATGCATaGTTCTGTCATGCCGTCCATGATGAGTTTGAGAAGATCCAAGTG +
Preference number: 5 (lower is better)
Translates to: TGHSSVAGFNASFDA*FCHAVHDEFEKIQV
Trigger: CACTTGGATCTTCTCAAACTCATCATGGACGGCATGACAGAAGCATGCATCAAAGGAGGCATTGAAGCCTGCTACGCTGCTGTGTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp TCTCTCAACAGCTCAAAGAGTAAATCTAAGGTGGGTGGTTGGTGTTaGCTTGGACAGTTGGACACAGCTGCTGTTAGCTGCTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: SLNSSKSKSKVGGWC*LGQLDTAAVSCSNR
Trigger: CCTGTTGGAGCAGCTAACAGCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCACCCACCTTAGATTTACTCTTTGAGCTGTTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp ACGGAGGAGCCACAGAGACATCACAGGAAGGAGAAGGTGAACAACTaGATAGATTCCAAACCCAGGGCCAGGTGTTTTGGTAACATCTCT +
Preference number: 5 (lower is better)
Translates to: TEEPQRHHRKEKVNN*IDSKPRARCFGNIS
Trigger: AGAGATGTTACCAAAACACCTGGCCCTGGGTTTGGAATCTATGCAGTTGTTCACCTTCTCCTTCCTGTGATGTCTCTGTGGCTCCTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTATCTCTTTCATGATCTaGATGGCTTCCACTCGGTGC +
Preference number: 5 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAISFMI*MASTRC
Trigger: GCACCGAGTGGAAGCCATCAAGATCATGAAAGAGAT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTAAGCAGCTGCTGCACTaGAGTGTCATTCAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAKQLLH*SVIQAF
Trigger: AAAGGCTTGAATGACACTCAAGTGCAGCAGCTGCTT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACAGGTCAGTCATCTACACTGAAGTaGCTCTCACTATACCTAGAT +
Preference number: 5 (lower is better)
Translates to: QPFPHSLTDSDVSHVTGQSSTLK*LSLYLD
Trigger: ATCTAGGTATAGTGAGAGCAACTTCAGTGTAGATGA...CTGACCTGTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTACTGGGCTCTTGGGATaGCCTTTCTTCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSATGLLG*PFFFLF
Trigger: GAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAGT...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTAGGCTGAGCACCACCTaGGCAGCACTGTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: LGKESLEKALLLGSRDLVRLSTT*AALFPL
Trigger: GAGTGGGAACAGTGCTGCCAAGGTGGTGCTCAGCCT...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CTCTTCCCAGCCATTCCCTCACAGCTTGACGGACTCGGATGTCAGTCACGTGACTGGATGTTGTCGGTATaGAGAAAAGCTTCAAACACA +
Preference number: 5 (lower is better)
Translates to: LFPAIPSQLDGLGCQSRDWMLSV*RKASNT
Trigger: TGTGTTTGAAGCTTTTCTCAATACCGACAACATCCA...GTCACGTGACTGACATCCGAGTCCGTCAAGCTGTGAGGGAATGGCTGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019999.7
CDS-3UTR CAA 90 bp AGGTTCCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGCTGCCTTCTCTTCTaGTACTCAGTCATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: RFQRPGLSGMVVGKMQSAGCLLF*YSVISF
Trigger: AAAGCTGATGACTGAGTACAAGAAGAGAAGGCAGCC...AGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp GACACATCAGACCTCCCTGAGTCCTTTTCTGCCGCCATGGAATACTaGTCACAGGAATCAAATTCAGTCCTCGACAGGTCTTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: DTSDLPESFSAAMEY*SQESNSVLDRSWSS
Trigger: AGATGACCAAGACCTGTCGAGGACTGAATTTGATTCCTGTGATCAGTATTCCATGGCGGCAGAAAAGGACTCAGGGAGGTCTGATGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp GTGTTGATCATACTCTCATACCTGATGTCTGAGTGTAGAAAGCTTTaGATGTGTTCCACCACCAGCTCGCAGGACAGACCAATGGCGTGC +
Preference number: 5 (lower is better)
Translates to: VLIILSYLMSECRKL*MCSTTSSQDRPMAC
Trigger: GCACGCCATTGGTCTGTCCTGCGAGCTGGTGGTGGAACACATTCAAAGCTTTCTACACTCAGACATCAGGTATGAGAGTATGATCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 90 bp CAGGTTATGTGGCTGCCTTCTCTTCTTGTACTCAGTCATCAGCTTTaGGATGGTCTTGTCAGCGGCCATTGTGCAAATCTTGTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: QVMWLPSLLVLSHQL*DGLVSGHCANLVPC
Trigger: GCAGGGAACAAGATTTGCACAATGGCCGCTGACAAGACCATCTCAAAGCTGATGACTGAGTACAAGAAGAGAAGGCAGCCACATAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp GTAACATCTCTCAACAGCTCAAAGAGTAAATCTAAGGTGGGTGGTTaGTGTTGCCTTGGACAGTTGGACACAGCTGCTGTTAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VTSLNSSKSKSKVGG*CCLGQLDTAAVSCS
Trigger: GGAGCAGCTAACAGCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCACCCACCTTAGATTTACTCTTTGAGCTGTTGAGAGATGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGTTGATGGCTTTGTATTaGCTCCCGGACGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWLMALY*LPDASL
Trigger: GAGAGATGCGTCCGGGAGCAAATACAAAGCCATCAA...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAACCTGCAGGTCCTCATaGAGTGACGGTGTCACTTTC +
Preference number: 5 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASTCRSS*SDGVTF
Trigger: GAAAGTGACACCGTCACTCAATGAGGACCTGCAGGT...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAAGTCATTTATGGAGGCTaGGAGCTTCTCACACAGAAC +
Preference number: 5 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQVIYGG*ELLTQN
Trigger: GTTCTGTGTGAGAAGCTCCAAGCCTCCATAAATGAC...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGACTCAGTCATCAGCTTaGAGATGGTCTTGTCAGCGG +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWTQSSA*RWSCQR
Trigger: CCGCTGACAAGACCATCTCAAAGCTGATGACTGAGT...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp GCCTTGGACAGTTGGACACAGCTGCTGTTAGCTGCTCCAACAGGATaGTCCAGACTTCTATCAGACCAGTGTCATCATCAAAATCTGACA +
Preference number: 5 (lower is better)
Translates to: ALDSWTQLLLAAPTG*SRLLSDQCHHQNLT
Trigger: TGTCAGATTTTGATGATGACACTGGTCTGATAGAAGTCTGGATCATCCTGTTGGAGCAGCTAACAGCAGCTGTGTCCAACTGTCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp TGTCATCATCAAAATCTGACAGGACTGATTCAATTCCATCTTCACTaGTTGCCGACTGCTCCTGAAGCCTTCGTGGCAAACTGGCAAGTC +
Preference number: 5 (lower is better)
Translates to: CHHQNLTGLIQFHLH*LPTAPEAFVANWQV
Trigger: GACTTGCCAGTTTGCCACGAAGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGAATTGAATCAGTCCTGTCAGATTTTGATGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 90 bp CAATGTCTGACACATCAGACCTCCCTGAGTCCTTTTCTGCCGCCATaGAATACTGATCACAGGAATCAAATTCAGTCCTCGACAGGTCTT +
Preference number: 5 (lower is better)
Translates to: QCLTHQTSLSPFLPP*NTDHRNQIQSSTGL
Trigger: AAGACCTGTCGAGGACTGAATTTGATTCCTGTGATCAGTATTCCATGGCGGCAGAAAAGGACTCAGGGAGGTCTGATGTGTCAGACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGAAGCAGCTGCTGCACTaGAGTGTCATTCAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWKQLLH*SVIQAF
Trigger: AAAGGCTTGAATGACACTCAAGTGCAGCAGCTGCTT...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTGGCCAGCAGTCCGGGTaGTGGCTTCCCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLGQQSG*WLPISR
Trigger: CCTGGAGATGGGAAGCCACAACCCGGACTGCTGGCC...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CCAGAGACCTGGTTTGAGTGGGATGGTGGTTGGGAAAATGCAGTCAGCTGGATGTGGATGTTGTCGGTATaGAGAAAAGCTTCAAACACA +
Preference number: 5 (lower is better)
Translates to: PETWFEWDGGWENAVSWMWMLSV*RKASNT
Trigger: TGTGTTTGAAGCTTTTCTCAATACCGACAACATCCA...CATCCAGCTGACTGCATTTTCCCAACCACCATCCCACTCAAACCAGGTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCAGGTCCTTCACTGGCTaGAGGGTGGCTGAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSRSFTG*RVAEKA
Trigger: CGCCTTCTCAGCCACCCTCAAGCCAGTGAAGGACCT...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 90 bp AGCACAGAGATGACGTCATCACAAAGGGCCTCTACTGTTAAGCCTTaGCTCCTGAATTCCTGTGGGGCATCTGGGTTTTCAATTATCGTA +
Preference number: 5 (lower is better)
Translates to: STEMTSSQRASTVKP*LLNSCGASGFSIIV
Trigger: TACGATAATTGAAAACCCAGATGCCCCACAGGAATTCAGGAGTCAAGGCTTAACAGTAGAGGCCCTTTGTGATGACGTCATCTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp ACTTTTAGTTTCACTTGTGCTAGGGCATCACTGGGCTCTTGGGATTaGCTTTCTTCTTTCTCTTCTTGGACACAGGATGCAGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: TFSFTCARASLGSWD*LSSFSSWTQDAAAI
Trigger: AATGGCAGCTGCATCCTGTGTCCAAGAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGCCCTAGCACAAGTGAAACTAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp AACTCTTCCAGCAGAATGTCATACAGGTTCTGGAGCAGAACTTGGTaGGAGAGCAAGCTAACCACAATCTCCCTGAAAGAGACACTTTTC +
Preference number: 5 (lower is better)
Translates to: NSSSRMSYRFWSRTW*ESKLTTISLKETLF
Trigger: GAAAAGTGTCTCTTTCAGGGAGATTGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp ACAAACTCTTCCAGCAGAATGTCATACAGGTTCTGGAGCAGAACTTaGTGCGAGAGCAAGCTAACCACAATCTCCCTGAAAGAGACACTT +
Preference number: 5 (lower is better)
Translates to: TNSSSRMSYRFWSRT*CESKLTTISLKETL
Trigger: AAGTGTCTCTTTCAGGGAGATTGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CTGAAAGTAAATGATTTCTACCCTTGGGTTCCCAGAGTAGCAGCAGTGGCTTCAATCTCTTTCATGATCTaGATGGCTTCCACTCGGTGC +
Preference number: 5 (lower is better)
Translates to: LKVNDFYPWVPRVAAVASISFMI*MASTRC
Trigger: GCACCGAGTGGAAGCCATCAAGATCATGAAAGAGAT...TGAAGCCACTGCTGCTACTCTGGGAACCCAAGGGTAGAAATCATTTACTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTTCAGCCAGGGAACAGTaGTCTGACCCAATGTCTGAC +
Preference number: 5 (lower is better)
Translates to: LGKESLEKALLLGSRDLVSAREQ*SDPMSD
Trigger: GTCAGACATTGGGTCAGACAACTGTTCCCTGGCTGA...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACATGGGAGAGCTTCAGGTaGAGCAGTAGGGCACAGTGT +
Preference number: 5 (lower is better)
Translates to: TKYTCKLAYRDPENSELTWESFR*SSRAQC
Trigger: ACACTGTGCCCTACTGCTCAACCTGAAGCTCTCCCA...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AACTGCTGTGTCCTTTCCCAAGGACTTGTCCATTTGGGAGGAGGGTTATTTTGGTCCTTCAGCATGGTGTaGATCATACTCTCATACCTG +
Preference number: 5 (lower is better)
Translates to: NCCVLSQGLVHLGGGLFWSFSMV*IILSYL
Trigger: CAGGTATGAGAGTATGATCAACACCATGCTGAAGGA...CCAAAATAACCCTCCTCCCAAATGGACAAGTCCTTGGGAAAGGACACAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCTCCGACGAGCACTGTaGGGAGGAATCCGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ERVTNILQGYLYKETGFYLRRAL*GGIRAP
Trigger: AGGAGCTCGGATTCCTCCCAACAGTGCTCGTCGGAG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACATCCCACCACTCTTTCTaGCGGCCAGGATCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TKYTCKLAYRDPENSELTSHHSF*RPGSFF
Trigger: GAAGAAGGATCCTGGCCGCAAGAAAGAGTGGTGGGA...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 90 bp TCTTTTGGAAATAGATCTTTTCCTTGGTTCAGACTCAATAGAGCTTaGTCCTGCCAAGTCATACAGACGCTGTGGGCTCCCAAGTATCTC +
Preference number: 5 (lower is better)
Translates to: SFGNRSFPWFRLNRA*SCQVIQTLWAPKYL
Trigger: GAGATACTTGGGAGCCCACAGCGTCTGTATGACTTGGCAGGACCAAGCTCTATTGAGTCTGAACCAAGGAAAAGATCTATTTCCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp TTGAGTTCTAGCTCACCTCCTTATCCCCAACATCCCCTCACAAACCACACCCAATCATCTACACTGAAGTaGCTCTCACTATACCTAGAT +
Preference number: 5 (lower is better)
Translates to: LSSSSPPYPQHPLTNHTQSSTLK*LSLYLD
Trigger: ATCTAGGTATAGTGAGAGCAACTTCAGTGTAGATGA...TTGGGTGTGGTTTGTGAGGGGATGTTGGGGATAAGGAGGTGAGCTAGAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCGTGGTTGGTGTTGCCTaGGACAGTTGGACACAGCTG +
Preference number: 5 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSVVGVA*DSWTQL
Trigger: CAGCTGTGTCCAACTGTCCAAGGCAACACCAACCAC...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATCCCGGAGAGGGGCCTTaGACAAACTCTTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: ERVTNILQGYLYKETGFYPGEGP*TNSSSR
Trigger: TCTGCTGGAAGAGTTTGTCAAAGGCCCCTCTCCGGG...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATAGCTTGTGCAGCCTCTaGACCAGCCACACCCAGTCT +
Preference number: 5 (lower is better)
Translates to: ERVTNILQGYLYKETGFYSLCSL*TSHTQS
Trigger: AGACTGGGTGTGGCTGGTCAAGAGGCTGCACAAGCT...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACTTTGTGAAGAGCATGGCGCATCTGCCCTaGGTCTATGAGATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: HTSGVFVQGNWLLYFVKSMAHLP*VYEMLW
Trigger: CCACAGCATCTCATAGACCAAGGGCAGATGCGCCAT...GCTCTTCACAAAGTATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp ACAAAATACACTTGCAAGCTTGCTTACAGAGACCCAGAAAACAGTGAACTGACACTCTCTTTGATGGCTTaGTATTTGCTCCCGGACGCA +
Preference number: 5 (lower is better)
Translates to: TKYTCKLAYRDPENSELTLSLMA*YLLPDA
Trigger: TGCGTCCGGGAGCAAATACAAAGCCATCAAAGAGAG...TGTCAGTTCACTGTTTTCTGGGTCTCTGTAAGCAAGCTTGCAAGTGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CTAGGTAAGGAGAGCTTAGAAAAAGCTTTGTTACTAGGTTCCAGAGACCTGGTTGTCATTTATGGAGGCTaGGAGCTTCTCACACAGAAC +
Preference number: 5 (lower is better)
Translates to: LGKESLEKALLLGSRDLVVIYGG*ELLTQN
Trigger: GTTCTGTGTGAGAAGCTCCAAGCCTCCATAAATGAC...AACCAGGTCTCTGGAACCTAGTAACAAAGCTTTTTCTAAGCTCTCCTTACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 90 bp CAGCCCCTTGACAAATTTCATAAGGCACATGATGTAACTAGTAGCTaGGTTAGCAAAGACCTGGATGTTGTCGGTATTGAGAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QPLDKFHKAHDVTSS*VSKDLDVVGIEKSF
Trigger: GAAGCTTTTCTCAATACCGACAACATCCAGGTCTTTGCTAACGCAGCTACTAGTTACATCATGTGCCTTATGAAATTTGTCAAGGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CACCGGGTGCTTCATGTTAACGTCACAGACTTAAAATCATGCTTGGAAAGAATTTTCTTCTTTCTCTTCTaGGACACAGGATGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HRVLHVNVTDLKSCLERIFFFLF*DTGCSC
Trigger: GCAGCTGCATCCTGTGTCCAAGAAGAGAAAGAAGAA...AATTCTTTCCAAGCATGATTTTAAGTCTGTGACGTTAACATGAAGCACCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATACCTCCCCCAGCCCCTaGACAAATTTCATAAGGCAC +
Preference number: 5 (lower is better)
Translates to: ERVTNILQGYLYKETGFYTSPSP*TNFIRH
Trigger: GTGCCTTATGAAATTTGTCAAGGGGCTGGGGGAGGT...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTAAGAACGGGTCGCTCTaGAAGGTAAGTGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLKNGSL*KVSGSS
Trigger: GGAGGAGCCACTTACCTTCAAGAGCGACCCGTTCTT...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATAGACCAATGGCGTGCTaGAAGTTAGCAGATGCCACA +
Preference number: 5 (lower is better)
Translates to: ERVTNILQGYLYKETGFYRPMAC*KLADAT
Trigger: TGTGGCATCTGCTAACTTCAAGCACGCCATTGGTCT...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp CCTGCTTCAGTCTTCTTAGTAGATGGACTTACGTTAATGAAACTTGTTTTACTTTTCTGGTTCTGCTCTTaGATACCCTCAGCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PASVFLVDGLTLMKLVLLFWFCS*IPSAPR
Trigger: CCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGAA...AAGTAAAACAAGTTTCATTAACGTAAGTCCATCTACTAAGAAGACTGAAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCGGCATCACTGGGCTCTaGGGATTGCCTTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTGITGL*GLPFFF
Trigger: AAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGCC...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp AAAGAATTTCCTTCCTTTAAAAACAGAGACATAAAGGCACAACAGTACCTTACCGCTTCAATGCCTCCTTaGATGCATGCTTCTGTCATG +
Preference number: 5 (lower is better)
Translates to: KEFPSFKNRDIKAQQYLTASMPP*MHASVM
Trigger: CATGACAGAAGCATGCATCAAAGGAGGCATTGAAGC...GGTAAGGTACTGTTGTGCCTTTATGTCTCTGTTTTTAAAGGAAGGAAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS-3UTR CAA 90 bp GAACGAGTAACTAACATACTTCAGGGGTATTTGTACAAGGAAACTGGCTTTTATGCAAAGACCTGGATGTaGTCGGTATTGAGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: ERVTNILQGYLYKETGFYAKTWM*SVLRKA
Trigger: AGCTTTTCTCAATACCGACAACATCCAGGTCTTTGC...ATAAAAGCCAGTTTCCTTGTACAAATACCCCTGAAGTATGTTAGTTACTCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp AGGTGCGGGGCCACGAGGCTCCAGCAGCGCATCACGTaGAGCAGGGGCCGGGCTTTGCTCCTCACAATCCTC +
Preference number: 6 (lower is better)
Translates to: RCGATRLQQRIT*SRGRALLLTIL
Trigger: GAGGATTGTGAGGAGCAAAGCCCGGCCCCTGCTCCACGTGATGCGCTGCTGGAGCCTCGTGGCCCCGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GCACTCGGGGAGGAAGAGGGTGCTGCTACGCGCACCTaGCAGCCTTCCCCACTGAAGCCCTCTGTACCACCG +
Preference number: 6 (lower is better)
Translates to: ALGEEEGAATRT*QPSPLKPSVPP
Trigger: CGGTGGTACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCTCTTCCTCCCCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CTGCAAGGTAATAGATGGTGCGGGCCACAGGCCCACTaGGGGTGGGTGCAGTGCAGGAGCAGCCTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: LQGNRWCGPQAH*GWVQCRSSLSP
Trigger: GGGGCTCAGGCTGCTCCTGCACTGCACCCACCCTCAGTGGGCCTGTGGCCCGCACCATCTATTACCTTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp GTACTCAGCCTCAGCACTCGGGGAGGAAGAGGGTGCTaGTACGCGCACCTGGCAGCCTTCCCCACTGAAGCC +
Preference number: 6 (lower is better)
Translates to: VLSLSTRGGRGC*YAHLAAFPTEA
Trigger: GGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCTCTTCCTCCCCGAGTGCTGAGGCTGAGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp AGGGTGCTGCTACGCGCACCTGGCAGCCTTCCCCACTaGAGCCCTCTGTACCACCGTGGAAGCAGCCTAGCA +
Preference number: 6 (lower is better)
Translates to: RVLLRAPGSLPH*SPLYHRGSSLA
Trigger: TGCTAGGCTGCTTCCACGGTGGTACAGAGGGCTTCAGTGGGGAAGGCTGCCAGGTGCGCGTAGCAGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp CCTCTTGACCAGCCACACCCAGTCTGCATTGCTTACTaGCTGCACACTGAGCGACGGCAGGCGTGCCCGCCA +
Preference number: 6 (lower is better)
Translates to: PLDQPHPVCIAY*LHTERRQACPP
Trigger: TGGCGGGCACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 72 bp AGCCTGTCGGCCTGGGTGGAAAGGCTGAGCACCACCTaGGCAGCACTGTTCCCACTCAGACTACCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: SLSAWVERLSTT*AALFPLRLPPR
Trigger: CCGGGGAGGTAGTCTGAGTGGGAACAGTGCTGCCAAGGTGGTGCTCAGCCTTTCCACCCAGGCCGACAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp ATTGCTTACTGGCTGCACACTGAGCGACGGCAGGCGTaGCCGCCATTGCCTTTTCTCCTTGCCTCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: IAYWLHTERRQA*PPLPFLLASWG
Trigger: CCCCCACGAGGCAAGGAGAAAAGGCAATGGCGGGCACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 72 bp TTGACCAGCCACACCCAGTCTGCATTGCTTACTGGCTaGACACTGAGCGACGGCAGGCGTGCCCGCCATTGC +
Preference number: 6 (lower is better)
Translates to: LTSHTQSALLTG*TLSDGRRARHC
Trigger: GCAATGGCGGGCACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp GAGGTCCGGCCACGGCTACATTCCCGAACAAGCTCCTaGATGGAGTGTGGCTGGACCACAGGGGCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: EVRPRLHSRTSS*MECGWTTGAVF
Trigger: GAACACAGCCCCTGTGGTCCAGCCACACTCCATCCAGGAGCTTGTTCGGGAATGTAGCCGTGGCCGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp CAGGCGTGCCCGCCATTGCCTTTTCTCCTTGCCTCGTaGGGGGCTCACCTGCGCAGTCTCCTCAAAGATGTC +
Preference number: 6 (lower is better)
Translates to: QACPPLPFLLAS*GAHLRSLLKDV
Trigger: GACATCTTTGAGGAGACTGCGCAGGTGAGCCCCCCACGAGGCAAGGAGAAAAGGCAATGGCGGGCACGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp TCTTGCGGCCAGGATCCTTCTTCTCTGTCTTGGGGCTaGGAGGCAGCATCAGCATGTCCCCACTGCCGACCC +
Preference number: 6 (lower is better)
Translates to: SCGQDPSSLSWG*EAASACPHCRP
Trigger: GGGTCGGCAGTGGGGACATGCTGATGCTGCCTCCCAGCCCCAAGACAGAGAAGAAGGATCCTGGCCGCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp ATGCACAGCTTGTGCAGCCTCTTGACCAGCCACACCCAGTCTGCATaGCTTACTGGCTGCACACTGAGCGACGGCAGGCGTGCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: MHSLCSLLTSHTQSA*LTGCTLSDGRRARH
Trigger: ATGGCGGGCACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGGCTGCACAAGCTGTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 72 bp CTGACTTGTTCCCACTGCGCACGGTCTCCAGAGCACTaGACAGGGGTCGCCATCCCGACTGGATCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LTCSHCARSPEH*TGVAIPTGSVQ
Trigger: CTGCACAGATCCAGTCGGGATGGCGACCCCTGTTCAGTGCTCTGGAGACCGTGCGCAGTGGGAACAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp AGCATCAGCATGTCCCCACTGCCGACCCTCAGACTCTaGGGCTCACTCAGGTGCTCCCTGCGGTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: SISMSPLPTLRL*GSLRCSLRSSS
Trigger: GGAAGATGACCGCAGGGAGCACCTGAGTGAGCCTCAGAGTCTGAGGGTCGGCAGTGGGGACATGCTGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 72 bp TCAGGGCTCCTCTCATTGCCTGACTCCCATGGAGTGTaGTCCGAAGACAGCACTCTCCGCTGCCAGCGGAAG +
Preference number: 6 (lower is better)
Translates to: SGLLSLPDSHGV*SEDSTLRCQRK
Trigger: CTTCCGCTGGCAGCGGAGAGTGCTGTCTTCGGAGCACACTCCATGGGAGTCAGGCAATGAGAGGAGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp CACACCCTGAACACGTGTGGCCAGCAGTCCGGGTTGTaGCTTCCCATCTCCAGGCCTACGCTGAGAATGGCA +
Preference number: 6 (lower is better)
Translates to: HTLNTCGQQSGL*LPISRPTLRMA
Trigger: TGCCATTCTCAGCGTAGGCCTGGAGATGGGAAGCCACAACCCGGACTGCTGGCCACACGTGTTCAGGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp TGGCAGCCTTCCCCACTGAAGCCCTCTGTACCACCGTaGAAGCAGCCTAGCAGGTCCTTCACTGGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: WQPSPLKPSVPP*KQPSRSFTGLR
Trigger: CCTCAAGCCAGTGAAGGACCTGCTAGGCTGCTTCCACGGTGGTACAGAGGGCTTCAGTGGGGAAGGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp TCCTGCCTCAGCAGCTCTGGGCCTGCGCTGAAGGAATaGCGCATCTGCCCTTGGTCTATGAGATGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: SCLSSSGPALKE*RICPWSMRCCG
Trigger: GCCACAGCATCTCATAGACCAAGGGCAGATGCGCCATTCCTTCAGCGCAGGCCCAGAGCTGCTGAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp TCATCAAAGAGCCTGTCGGCCTGGGTGGAAAGGCTGAGCACCACCTaGGCAGCACTGTTCCCACTCAGACTACCTCCCCGGAAGTCCGAG +
Preference number: 6 (lower is better)
Translates to: SSKSLSAWVERLSTT*AALFPLRLPPRKSE
Trigger: CTCGGACTTCCGGGGAGGTAGTCTGAGTGGGAACAGTGCTGCCAAGGTGGTGCTCAGCCTTTCCACCCAGGCCGACAGGCTCTTTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CCAAGGAGGCCAGAGCTCCCAGATGTCTTCTGTGGCTaGTGGATGGTCAGAGGGGGCTGGGAGATACCATCG +
Preference number: 6 (lower is better)
Translates to: PRRPELPDVFCG*WMVRGGWEIPS
Trigger: CGATGGTATCTCCCAGCCCCCTCTGACCATCCATCAGCCACAGAAGACATCTGGGAGCTCTGGCCTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CGTCATCAAAGAGCCTGTCGGCCTGGGTGGAAAGGCTaGGCACCACCTTGGCAGCACTGTTCCCACTCAGAC +
Preference number: 6 (lower is better)
Translates to: RHQRACRPGWKG*APPWQHCSHSD
Trigger: GTCTGAGTGGGAACAGTGCTGCCAAGGTGGTGCTCAGCCTTTCCACCCAGGCCGACAGGCTCTTTGATGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CCGTACAGAGACACTAAGGGAGCTTCCTGTGGAGCCTaGCCGAGGTCTCTTCTCCTGCCTCAGCAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PYRDTKGASCGA*PRSLLLPQQLW
Trigger: CCAGAGCTGCTGAGGCAGGAGAAGAGACCTCGGTCAGGCTCCACAGGAAGCTCCCTTAGTGTCTCTGTACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp TTCCCCAAGGAGGCCAGAGCTCCCAGATGTCTTCTGTaGCTGATGGATGGTCAGAGGGGGCTGGGAGATACC +
Preference number: 6 (lower is better)
Translates to: FPKEARAPRCLL*LMDGQRGLGDT
Trigger: GGTATCTCCCAGCCCCCTCTGACCATCCATCAGCCACAGAAGACATCTGGGAGCTCTGGCCTCCTTGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp AACTTGTCGGTCGCGTCATCAAAGAGCCTGTCGGCCTaGGTGGAAAGGCTGAGCACCACCTTGGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: NLSVASSKSLSA*VERLSTTLAAL
Trigger: CAGTGCTGCCAAGGTGGTGCTCAGCCTTTCCACCCAGGCCGACAGGCTCTTTGATGACGCGACCGACAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GTCTCCAGAGCACTGAACAGGGGTCGCCATCCCGACTaGATCTGTGCAGAGCACACCTCAACCAGCTCACCA +
Preference number: 6 (lower is better)
Translates to: VSRALNRGRHPD*ICAEHTSTSSP
Trigger: TGGTGAGCTGGTTGAGGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACCCCTGTTCAGTGCTCTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp TCACACACCCTGAACACGTGTGGCCAGCAGTCCGGGTaGTGGCTTCCCATCTCCAGGCCTACGCTGAGAATG +
Preference number: 6 (lower is better)
Translates to: SHTLNTCGQQSG*WLPISRPTLRM
Trigger: CATTCTCAGCGTAGGCCTGGAGATGGGAAGCCACAACCCGGACTGCTGGCCACACGTGTTCAGGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp TTGTGCAGCCTCTTGACCAGCCACACCCAGTCTGCATaGCTTACTGGCTGCACACTGAGCGACGGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: LCSLLTSHTQSA*LTGCTLSDGRR
Trigger: ACGCCTGCCGTCGCTCAGTGTGCAGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGGCTGCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp GACGATTCGGACTGGAAGGAGGGGAGAATGAAGAACGGGTCGCTCTaGAAGGTAAGTGGCTCCTCCAAGCTGCTCTCCAGGTCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: DDSDWKEGRMKNGSL*KVSGSSKLLSRSRC
Trigger: GCACCTGGACCTGGAGAGCAGCTTGGAGGAGCCACTTACCTTCAAGAGCGACCCGTTCTTCATTCTCCCCTCCTTCCAGTCCGAATCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 72 bp GCTTCCGGTAGTAGTCACCGTGGGAGAGCTTCAGGTTaGGCAGTAGGGCACAGTGTGCCGCTGTGTACAAGC +
Preference number: 6 (lower is better)
Translates to: ASGSSHRGRASG*AVGHSVPLCTS
Trigger: GCTTGTACACAGCGGCACACTGTGCCCTACTGCTCAACCTGAAGCTCTCCCACGGTGACTACTACCGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TACTGCGCTGGTGGCAGCTGCACGTGTAGGTCTCGATaGACACCTCTGCGATCTTCAGAACGGCACTCCCAT +
Preference number: 6 (lower is better)
Translates to: YCAGGSCTCRSR*TPLRSSERHSH
Trigger: ATGGGAGTGCCGTTCTGAAGATCGCAGAGGTGTGCATCGAGACCTACACGTGCAGCTGCCACCAGCGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp CAGAGGCTTTTCCAGATGAGGTCTGTGAAGCCCCTGTaGAGGTGCATGGAGGAAGAGGAGCTGCTGAGCACG +
Preference number: 6 (lower is better)
Translates to: QRLFQMRSVKPL*RCMEEEELLST
Trigger: CGTGCTCAGCAGCTCCTCTTCCTCCATGCACCTGCACAGGGGCTTCACAGACCTCATCTGGAAAAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGCACTGAACAGGGGTCGCCATCCCGACTGGATCTGTaGAGAGCACACCTCAACCAGCTCACCAATGGAGGT +
Preference number: 6 (lower is better)
Translates to: STEQGSPSRLDL*RAHLNQLTNGG
Trigger: ACCTCCATTGGTGAGCTGGTTGAGGTGTGCTCTGCACAGATCCAGTCGGGATGGCGACCCCTGTTCAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TGGCCGACTGGCGGTAGAGGTTGGCTGCTCCTCCAATaGCAGACACTTTCTTCAGCAGGCATTTCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: WPTGGRGWLLLQ*QTLSSAGISAL
Trigger: CAGGGCTGAAATGCCTGCTGAAGAAAGTGTCTGGCATTGGAGGAGCAGCCAACCTCTACCGCCAGTCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp CAGTGTACCCACATACTCACACACCCTGAACACGTGTaGCCAGCAGTCCGGGTTGTGGCTTCCCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: QCTHILTHPEHV*PAVRVVASHLQ
Trigger: CTGGAGATGGGAAGCCACAACCCGGACTGCTGGCCACACGTGTTCAGGGTGTGTGAGTATGTGGGTACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CCATGGTCCCCTTGCCTTCCTGAATGGCTGGTGACTTaGGCCCATTCTTGTGGTCCTCTGGTGTCGTCTGAC +
Preference number: 6 (lower is better)
Translates to: PWSPCLPEWLVT*AHSCGPLVSSD
Trigger: GTCAGACGACACCAGAGGACCACAAGAATGGGCTCAAGTCACCAGCCATTCAGGAAGGCAAGGGGACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CGCTGTGCTGGTCTGCCTCCTGGTTCTTTAGCAGTTTaGGAGACAAAGCAGCGGTTCGAAGGGACCGATGGC +
Preference number: 6 (lower is better)
Translates to: RCAGLPPGSLAV*ETKQRFEGTDG
Trigger: GCCATCGGTCCCTTCGAACCGCTGCTTTGTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GATGGATGGTCAGAGGGGGCTGGGAGATACCATCGCTaGAGTGGGTGTGCTCCAGTGTACCCACATACTCAC +
Preference number: 6 (lower is better)
Translates to: DGWSEGAGRYHR*SGCAPVYPHTH
Trigger: GTGAGTATGTGGGTACACTGGAGCACACCCACTTCAGCGATGGTATCTCCCAGCCCCCTCTGACCATCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGAGGGGGCTGGGAGATACCATCGCTGAAGTGGGTGTaGTCCAGTGTACCCACATACTCACACACCCTGAAC +
Preference number: 6 (lower is better)
Translates to: RGGWEIPSLKWV*SSVPTYSHTLN
Trigger: GTTCAGGGTGTGTGAGTATGTGGGTACACTGGAGCACACCCACTTCAGCGATGGTATCTCCCAGCCCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TGCAAGTCTCCACATCTCCTCCGTGAACACGGGACCTaGTGTCACGAGGACGTACCTAATGCAGGAACAGCC +
Preference number: 6 (lower is better)
Translates to: CKSPHLLREHGT*CHEDVPNAGTA
Trigger: GGCTGTTCCTGCATTAGGTACGTCCTCGTGACAGCAGGTCCCGTGTTCACGGAGGAGATGTGGAGACTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp ATGGTCAGAGGGGGCTGGGAGATACCATCGCTGAAGTaGGTGTGCTCCAGTGTACCCACATACTCACACACC +
Preference number: 6 (lower is better)
Translates to: MVRGGWEIPSLK*VCSSVPTYSHT
Trigger: GGTGTGTGAGTATGTGGGTACACTGGAGCACACCCACTTCAGCGATGGTATCTCCCAGCCCCCTCTGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp TATCTGAGGAAGCCGGCCAGCTTGGTGTCTGGTACTTaGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: YLRKPASLVSGT*TVFSSPGEGPL
Trigger: CAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp GGGGAGAATGAAGAACGGGTCGCTCTTGAAGGTAAGTaGCTCCTCCAAGCTGCTCTCCAGGTCCAGGTGCAT +
Preference number: 6 (lower is better)
Translates to: GENEERVALEGK*LLQAALQVQVH
Trigger: ATGCACCTGGACCTGGAGAGCAGCTTGGAGGAGCCACTTACCTTCAAGAGCGACCCGTTCTTCATTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp GAGAAGCCACCTGTTGATGGGGTGGACGATTCGGACTaGAAGGAGGGGAGAATGAAGAACGGGTCGCTCTTG +
Preference number: 6 (lower is better)
Translates to: EKPPVDGVDDSD*KEGRMKNGSLL
Trigger: CAAGAGCGACCCGTTCTTCATTCTCCCCTCCTTCCAGTCCGAATCGTCCACCCCATCAACAGGTGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 72 bp GTATCTGAGGAAGCCGGCCAGCTTGGTGTCTGGTACTaGGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: VSEEAGQLGVWY*DCLLFSRRGAF
Trigger: AAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 72 bp GACTGGAAGGAGGGGAGAATGAAGAACGGGTCGCTCTaGAAGGTAAGTGGCTCCTCCAAGCTGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: DWKEGRMKNGSL*KVSGSSKLLSR
Trigger: CCTGGAGAGCAGCTTGGAGGAGCCACTTACCTTCAAGAGCGACCCGTTCTTCATTCTCCCCTCCTTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp GCGCAGAAGCAGCTGCTGCACTTGAGTGTCATTCAAGCCTTTCCCTaGGCTGAGTTCATCCAGAGCCCCAAGCAAGGTGCAGACACAGGA +
Preference number: 6 (lower is better)
Translates to: AQKQLLHLSVIQAFP*AEFIQSPKQGADTG
Trigger: TCCTGTGTCTGCACCTTGCTTGGGGCTCTGGATGAACTCAGCCAAGGGAAAGGCTTGAATGACACTCAAGTGCAGCAGCTGCTTCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 90 bp ACAGCCAGGTTCTGCATGGAAATGTATCTGAGGAAGCCGGCCAGCTaGGTGTCTGGTACTTGGACTGTCTTCTCTTCTCCCGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: TARFCMEMYLRKPAS*VSGTWTVFSSPGEG
Trigger: CCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATACATTTCCATGCAGAACCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 72 bp CACCTAGGGTTTCCAGGGCCCAGGTGCAGCTCTCTTTaGTGGCTTTGTATTTGCTCCCGGACGCATCTCTCT +
Preference number: 6 (lower is better)
Translates to: HLGFPGPRCSSL*WLCICSRTHLS
Trigger: AGAGAGATGCGTCCGGGAGCAAATACAAAGCCATCAAAGAGAGCTGCACCTGGGCCCTGGAAACCCTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp TTTGCCCATGGTCCCCTTGCCTTCCTGAATGGCTGGTaGCTTGAGCCCATTCTTGTGGTCCTCTGGTGTCGT +
Preference number: 6 (lower is better)
Translates to: FAHGPLAFLNGW*LEPILVVLWCR
Trigger: ACGACACCAGAGGACCACAAGAATGGGCTCAAGTCACCAGCCATTCAGGAAGGCAAGGGGACCATGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GGTTACAGAGCTCCATGCACAGCTTGTGCAGCCTCTTaGCCAGCCACACCCAGTCTGCATTGCTTACTGGCT +
Preference number: 6 (lower is better)
Translates to: GYRAPCTACAAS*PATPSLHCLLA
Trigger: AGCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGGCTGCACAAGCTGTGCATGGAGCTCTGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 72 bp CAGGCCTGGGAGAAGACCATGAGCACGCCGCTGGTCTaGACCTGTTTCATGAACTCTTTCATCATGCCTGGT +
Preference number: 6 (lower is better)
Translates to: QAWEKTMSTPLV*TCFMNSFIMPG
Trigger: ACCAGGCATGATGAAAGAGTTCATGAAACAGGTGCAGACCAGCGGCGTGCTCATGGTCTTCTCCCAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp GTTAAAGCTCATGGCCGACTGGCGGTAGAGGTTGGCTaGTCCTCCAATGCCAGACACTTTCTTCAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: VKAHGRLAVEVG*SSNARHFLQQA
Trigger: TGCCTGCTGAAGAAAGTGTCTGGCATTGGAGGAGCAGCCAACCTCTACCGCCAGTCGGCCATGAGCTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 72 bp GGTCTTGTCAGCGGCCATTGTGCAAATCTTGTTCCCTaGACTCTCCCACCACTCTTTCTTGCGGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: GLVSGHCANLVP*TLPPLFLAARI
Trigger: GATCCTGGCCGCAAGAAAGAGTGGTGGGAGAGTGCAGGGAACAAGATTTGCACAATGGCCGCTGACAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp TTTCATGATCTTGATGGCTTCCACTCGGTGCTGGGGTaGGGGATACAGGAGCACTCGGTGATAGAGGGACTG +
Preference number: 6 (lower is better)
Translates to: FHDLDGFHSVLG*GIQEHSVIEGL
Trigger: CAGTCCCTCTATCACCGAGTGCTCCTGTATCCCCCACCCCAGCACCGAGTGGAAGCCATCAAGATCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GGAAATGTATCTGAGGAAGCCGGCCAGCTTGGTGTCTaGTACTTGGACTGTCTTCTCTTCTCCCGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GNVSEEAGQLGV*YLDCLLFSRRG
Trigger: CCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATACATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp CAGACACTTTCTTCAGCAGGCATTTCAGCCCTGGGCTaGTGTCGAATTCCCGGGCAGTCCTATAGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: QTLSSAGISALG*CRIPGQSYRSP
Trigger: TGGACTCCTATAGGACTGCCCGGGAATTCGACACCAGCCCAGGGCTGAAATGCCTGCTGAAGAAAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 72 bp GGCATCCCCCAGGCGGAACAGGTGGAGAGCGCTTTTTaGATCCTGGGTAGACTTGACTTCACCTGGCATTGT +
Preference number: 6 (lower is better)
Translates to: GIPQAEQVESAF*ILGRLDFTWHC
Trigger: ACAATGCCAGGTGAAGTCAAGTCTACCCAGGATCAAAAAAGCGCTCTCCACCTGTTCCGCCTGGGGGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp CAGGAACAGCCCACCCTGGAGATGGTTTCTGTGGGCTaGGCCACGCATACTACCAGTAGCTCAAAGAGATCC +
Preference number: 6 (lower is better)
Translates to: QEQPTLEMVSVG*ATHTTSSSKRS
Trigger: GGATCTCTTTGAGCTACTGGTAGTATGCGTGGCCAAGCCCACAGAAACCATCTCCAGGGTGGGCTGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp TGGTTACAGAGCTCCATGCACAGCTTGTGCAGCCTCTaGACCAGCCACACCCAGTCTGCATTGCTTACTGGC +
Preference number: 6 (lower is better)
Translates to: WLQSSMHSLCSL*TSHTQSALLTG
Trigger: GCCAGTAAGCAATGCAGACTGGGTGTGGCTGGTCAAGAGGCTGCACAAGCTGTGCATGGAGCTCTGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp TTCTGCTCTTTGATACCCTCAGCTCCAAGGATGAAGGCCAACCCCTaGGAGCTTCCTGCCATCCGACCAGTCAAGGGGGTTGACAGAGTA +
Preference number: 6 (lower is better)
Translates to: FCSLIPSAPRMKANP*ELPAIRPVKGVDRV
Trigger: TACTCTGTCAACCCCCTTGACTGGTCGGATGGCAGGAAGCTCCAAGGGGTTGGCCTTCATCCTTGGAGCTGAGGGTATCAAAGAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CTCTGCCGTAACTGTAAAGTCAGGTCACCCAGCATCTaGCTGAGCGTTGCACGCACGGCAGTGTTGATACTG +
Preference number: 6 (lower is better)
Translates to: LCRNCKVRSPSI*LSVARTAVLIL
Trigger: CAGTATCAACACTGCCGTGCGTGCAACGCTCAGTCAGATGCTGGGTGACCTGACTTTACAGTTACGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GCTGCACTTGAGTGTCATTCAAGCCTTTCCCTTGGCTaGGTTCATCCAGAGCCCCAAGCAAGGTGCAGACAC +
Preference number: 6 (lower is better)
Translates to: AALECHSSLSLG*VHPEPQARCRH
Trigger: GTGTCTGCACCTTGCTTGGGGCTCTGGATGAACTCAGCCAAGGGAAAGGCTTGAATGACACTCAAGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GACTTGAGCCCATTCTTGTGGTCCTCTGGTGTCGTCTaGCCCAATTCTCCTTCCAAGGTAGTCTGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: DLSPFLWSSGVV*PNSPSKVVWPV
Trigger: CACAGGCCAGACTACCTTGGAAGGAGAATTGGGTCAGACGACACCAGAGGACCACAAGAATGGGCTCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp TGCATCATGCCTGAGCAGAAAGTAGAGGCAAAGTTCTaGAGGGCGGAGTCCACCTCTTCCACACTGGACAGG +
Preference number: 6 (lower is better)
Translates to: CIMPEQKVEAKF*RAESTSSTLDR
Trigger: CCTGTCCAGTGTGGAAGAGGTGGACTCCGCCCTTCAGAACTTTGCCTCTACTTTCTGCTCAGGCATGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CTTGGAGCTTCCTGCCATCCGACCAGTCAAGGGGGTTaGCAGAGTATCAATCAGGTTCTTCCAGCAGCCAAC +
Preference number: 6 (lower is better)
Translates to: LGASCHPTSQGG*QSINQVLPAAN
Trigger: GTTGGCTGCTGGAAGAACCTGATTGATACTCTGTCAACCCCCTTGACTGGTCGGATGGCAGGAAGCTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GTGCAGAGCACACCTCAACCAGCTCACCAATGGAGGTaGCCACCTGGTCTTGGACATCTTCATCACAGAGCT +
Preference number: 6 (lower is better)
Translates to: VQSTPQPAHQWR*PPGLGHLHHRA
Trigger: AGCTCTGTGATGAAGATGTCCAAGACCAGGTGGTCACCTCCATTGGTGAGCTGGTTGAGGTGTGCTCTGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp GTGGCAGCTGCACGTGTAGGTCTCGATGCACACCTCTaGGATCTTCAGAACGGCACTCCCATTCATGTCAAA +
Preference number: 6 (lower is better)
Translates to: VAAARVGLDAHL*DLQNGTPIHVK
Trigger: TTTGACATGAATGGGAGTGCCGTTCTGAAGATCGCAGAGGTGTGCATCGAGACCTACACGTGCAGCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGGCCCTCAAGGGACTGTATAAACAGTCGGGCGCTGTaGTGGTCTGCCTCCTGGTTCTTTAGCAGTTTGAGA +
Preference number: 6 (lower is better)
Translates to: RPSRDCINSRAL*WSASWFFSSLR
Trigger: TCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTTTATACAGTCCCTTGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp CTGCACCTGTTTCATGAACTCTTTCATCATGCCTGGTaGCACGGTTGGTCGCTTCCGGTAGTAGTCACCGTG +
Preference number: 6 (lower is better)
Translates to: LHLFHELFHHAW*HGWSLPVVVTV
Trigger: CACGGTGACTACTACCGGAAGCGACCAACCGTGGCACCAGGCATGATGAAAGAGTTCATGAAACAGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp GCAGGACAGACCAATGGCGTGCTTGAAGTTAGCAGATaGCACATCCCAGTAGGAATGGTCCTTGTGGCTACG +
Preference number: 6 (lower is better)
Translates to: AGQTNGVLEVSR*HIPVGMVLVAT
Trigger: CGTAGCCACAAGGACCATTCCTACTGGGATGTGGCATCTGCTAACTTCAAGCACGCCATTGGTCTGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGAACAGTTAGCACCATGTTGGTCCACGCCTGGATCTaGGCTTCTGCATCCCGTACAGAGACACTAAGGGAG +
Preference number: 6 (lower is better)
Translates to: RTVSTMLVHAWI*ASASRTETLRE
Trigger: CTCCCTTAGTGTCTCTGTACGGGATGCAGAAGCGCAGATCCAGGCGTGGACCAACATGGTGCTAACTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp CCCTCAAGGGACTGTATAAACAGTCGGGCGCTGTGCTaGTCTGCCTCCTGGTTCTTTAGCAGTTTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: PSRDCINSRALC*SASWFFSSLRD
Trigger: GTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTTTATACAGTCCCTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp AGGAACAGCCCACCCTGGAGATGGTTTCTGTGGGCTTaGCCACGCATACTACCAGTAGCTCAAAGAGATCCT +
Preference number: 6 (lower is better)
Translates to: RNSPPWRWFLWA*PRILPVAQRDP
Trigger: AGGATCTCTTTGAGCTACTGGTAGTATGCGTGGCCAAGCCCACAGAAACCATCTCCAGGGTGGGCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp AATGCCAGACACTTTCTTCAGCAGGCATTTCAGCCCTaGGCTGGTGTCGAATTCCCGGGCAGTCCTATAGGA +
Preference number: 6 (lower is better)
Translates to: NARHFLQQAFQP*AGVEFPGSPIG
Trigger: TCCTATAGGACTGCCCGGGAATTCGACACCAGCCCAGGGCTGAAATGCCTGCTGAAGAAAGTGTCTGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 72 bp TCCCGAGGGGTCTGTTCTTCATCAGCCAGGGAACAGTaGTCTGACCCAATGTCTGACACATCAGACCTCCCT +
Preference number: 6 (lower is better)
Translates to: SRGVCSSSAREQ*SDPMSDTSDLP
Trigger: AGGGAGGTCTGATGTGTCAGACATTGGGTCAGACAACTGTTCCCTGGCTGATGAAGAACAGACCCCTCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp CCTTGGAGCTTCCTGCCATCCGACCAGTCAAGGGGGTaGACAGAGTATCAATCAGGTTCTTCCAGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: PWSFLPSDQSRG*TEYQSGSSSSQ
Trigger: TTGGCTGCTGGAAGAACCTGATTGATACTCTGTCAACCCCCTTGACTGGTCGGATGGCAGGAAGCTCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp CTCCTCAAAGATGTCTTCATCCTCCGACGAGCACTGTaGGGAGGAATCCGAGCTCCTCTCCTCCTCTTCGAA +
Preference number: 6 (lower is better)
Translates to: LLKDVFILRRAL*GGIRAPLLLFE
Trigger: TTCGAAGAGGAGGAGAGGAGCTCGGATTCCTCCCAACAGTGCTCGTCGGAGGATGAAGACATCTTTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp CATGGAAATGTATCTGAGGAAGCCGGCCAGCTTGGTGTCTGGTACTaGGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTTGACAAACTC +
Preference number: 6 (lower is better)
Translates to: HGNVSEEAGQLGVWY*DCLLFSRRGAFDKL
Trigger: GAGTTTGTCAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACACCAAGCTGGCCGGCTTCCTCAGATACATTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 72 bp AGGACCTTGTCCTGCAGTCCACTGACAGGAAGTTGGTaGTATCGGGGTAAGGGACTGTGTGGCTTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: RTLSCSPLTGSW*YRGKGLCGFSE
Trigger: TTCAGAGAAGCCACACAGTCCCTTACCCCGATATCACCAACTTCCTGTCAGTGGACTGCAGGACAAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp TCAAAGGGCCGGAAGAGTGCTTCGTTAAAGTGGAAGTaGGGTGGCTCACTCCAGTCAGTGAGAACCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SKGRKSASLKWK*GGSLQSVRTSV
Trigger: GACAGAGGTTCTCACTGACTGGAGTGAGCCACCTCACTTCCACTTTAACGAAGCACTCTTCCGGCCCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GATTCAATTCCATCTTCACTGCTTGCCGACTGCTCCTaGAGCCTTCGTGGCAAACTGGCAAGTCGCCCACTA +
Preference number: 6 (lower is better)
Translates to: DSIPSSLLADCS*SLRGKLASRPL
Trigger: TAGTGGGCGACTTGCCAGTTTGCCACGAAGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGAATTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GGACTGAGCGTGATCGAAGTTGTTTGGAGTCTTTGGTaGGCACTGGGTGTCCAACATAAACACCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GLSVIEVVWSLW*ALGVQHKHLLG
Trigger: GCCCAGCAGGTGTTTATGTTGGACACCCAGTGCTCACCAAAGACTCCAAACAACTTCGATCACGCTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TGTCTGCATTCATCAGCATCTGGAAGCTCAGGCTACTaGCTCCATCAAAGCCAGGAGAGTGCATCATGCCTG +
Preference number: 6 (lower is better)
Translates to: CLHSSASGSSGY*LHQSQESASCL
Trigger: CAGGCATGATGCACTCTCCTGGCTTTGATGGAGGCAGTAGCCTGAGCTTCCAGATGCTGATGAATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGGCTCATGCAGATGGCATCTCGCTCTTTCTGGTTCTaGTCTTTGATACCCTCAGCTCCAAGGATGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RLMQMASRSFWF*SLIPSAPRMKA
Trigger: GGCCTTCATCCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGAAAGAGCGAGATGCCATCTGCATGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TCAGTCGCGCAGCTTTCCTTAGCCCATCAAGGCTCATaGAGATGGCATCTCGCTCTTTCTGGTTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: SVAQLSLAHQGS*RWHLALSGSAL
Trigger: AAGAGCAGAACCAGAAAGAGCGAGATGCCATCTGCATGAGCCTTGATGGGCTAAGGAAAGCTGCGCGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GTGAAAGGTGACTCCACTGAAGCTGACGCCATCAACTaGCCACCGATTGCGCTACTCTCTAGACCATCGATA +
Preference number: 6 (lower is better)
Translates to: VKGDSTEADAIN*PPIALLSRPSI
Trigger: TATCGATGGTCTAGAGAGTAGCGCAATCGGTGGCCAGTTGATGGCGTCAGCTTCAGTGGAGTCACCTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GGGCCGGAAGAGTGCTTCGTTAAAGTGGAAGTGAGGTaGCTCACTCCAGTCAGTGAGAACCTCTGTCAAGAT +
Preference number: 6 (lower is better)
Translates to: GPEECFVKVEVR*LTPVSENLCQD
Trigger: ATCTTGACAGAGGTTCTCACTGACTGGAGTGAGCCACCTCACTTCCACTTTAACGAAGCACTCTTCCGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp ATGCAGATGGCATCTCGCTCTTTCTGGTTCTGCTCTTaGATACCCTCAGCTCCAAGGATGAAGGCCAACCCC +
Preference number: 6 (lower is better)
Translates to: MQMASRSFWFCS*IPSAPRMKANP
Trigger: GGGGTTGGCCTTCATCCTTGGAGCTGAGGGTATCAAAGAGCAGAACCAGAAAGAGCGAGATGCCATCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 90 bp TACCTAATGCAGGAACAGCCCACCCTGGAGATGGTTTCTGTGGGCTaGGCCACGCATACTACCAGTAGCTCAAAGAGATCCTTCAGCATG +
Preference number: 6 (lower is better)
Translates to: YLMQEQPTLEMVSVG*ATHTTSSSKRSFSM
Trigger: CATGCTGAAGGATCTCTTTGAGCTACTGGTAGTATGCGTGGCCAAGCCCACAGAAACCATCTCCAGGGTGGGCTGTTCCTGCATTAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 90 bp GTGTCTGGTACTTGGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTaGACAAACTCTTCCAGCAGAATGTCATACAGGTTCTGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: VSGTWTVFSSPGEGP*TNSSSRMSYRFWSR
Trigger: TCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTTTGTCAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGTACCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 72 bp GCAGCCAACCAAAATATAACGGGCAAATGCAACACCTaGTACCGTGGAGTCATCAAGTCTCCTGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: AANQNITGKCNT*YRGVIKSPALG
Trigger: ACCCAGAGCAGGAGACTTGATGACTCCACGGTAGCAGGTGTTGCATTTGCCCGTTATATTTTGGTTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GAGAGGATGCATTCCAGGTACAGAAGCTGTAGCTGCTaGCTGTCATTTATGGAGGCTTGGAGCTTCTCACAC +
Preference number: 6 (lower is better)
Translates to: ERMHSRYRSCSC*LSFMEAWSFSH
Trigger: GTGTGAGAAGCTCCAAGCCTCCATAAATGACAGCCAGCAGCTACAGCTTCTGTACCTGGAATGCATCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp TGTATAAACAGTCGGGCGCTGTGCTGGTCTGCCTCCTaGTTCTTTAGCAGTTTGAGAGACAAAGCAGCGGTT +
Preference number: 6 (lower is better)
Translates to: CINSRALCWSAS*FFSSLRDKAAV
Trigger: AACCGCTGCTTTGTCTCTCAAACTGCTAAAGAACCAGGAGGCAGACCAGCACAGCGCCCGACTGTTTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 90 bp CATCATCAAAATCTGACAGGACTGATTCAATTCCATCTTCACTGCTaGCCGACTGCTCCTGAAGCCTTCGTGGCAAACTGGCAAGTCGCC +
Preference number: 6 (lower is better)
Translates to: HHQNLTGLIQFHLHC*PTAPEAFVANWQVA
Trigger: GGCGACTTGCCAGTTTGCCACGAAGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGAATTGAATCAGTCCTGTCAGATTTTGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp TTGAGTGACGGTGTCACTTTCACTGCATTCAGGATCTaGTTGAGCAGCTGCTTCTCATCGGAGTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSDGVTFTAFRI*LSSCFSSESVS
Trigger: GGAGACAGACTCCGATGAGAAGCAGCTGCTCAATCAGATCCTGAATGCAGTGAAAGTGACACCGTCACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GACCTCCCTGAGTCCTTTTCTGCCGCCATGGAATACTaGTCACAGGAATCAAATTCAGTCCTCGACAGGTCT +
Preference number: 6 (lower is better)
Translates to: DLPESFSAAMEY*SQESNSVLDRS
Trigger: AGACCTGTCGAGGACTGAATTTGATTCCTGTGATCAGTATTCCATGGCGGCAGAAAAGGACTCAGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp TCTGTCAAGATATCATGGATGAAGGAAACGGCCTTCTaGGACACATGGCGTTCTTTATGGCAGGCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SVKISWMKETAF*DTWRSLWQAAS
Trigger: GGAGGCTGCCTGCCATAAAGAACGCCATGTGTCTCAGAAGGCCGTTTCCTTCATCCATGATATCTTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TCCATGGAGACAAATCTCTCTTCTGACAGGAGCTTCTaGATTCCTGCCAAAGCATGTTGGGCCAGCTTCACA +
Preference number: 6 (lower is better)
Translates to: SMETNLSSDRSF*IPAKACWASFT
Trigger: TGTGAAGCTGGCCCAACATGCTTTGGCAGGAATGCAGAAGCTCCTGTCAGAAGAGAGATTTGTCTCCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGCAGCGTAGCAGGCTTCAATGCCTCCTTTGATGCATaGTTCTGTCATGCCGTCCATGATGAGTTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: SSVAGFNASFDA*FCHAVHDEFEK
Trigger: CTTCTCAAACTCATCATGGACGGCATGACAGAAGCATGCATCAAAGGAGGCATTGAAGCCTGCTACGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TGTTGCCTTGGACAGTTGGACACAGCTGCTGTTAGCTaGTCCAACAGGATGATCCAGACTTCTATCAGACCA +
Preference number: 6 (lower is better)
Translates to: CCLGQLDTAAVS*SNRMIQTSIRP
Trigger: TGGTCTGATAGAAGTCTGGATCATCCTGTTGGAGCAGCTAACAGCAGCTGTGTCCAACTGTCCAAGGCAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGCTCAAAGAGTAAATCTAAGGTGGGTGGTTGGTGTTaGCTTGGACAGTTGGACACAGCTGCTGTTAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSKSKSKVGGWC*LGQLDTAAVSC
Trigger: GCAGCTAACAGCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCACCCACCTTAGATTTACTCTTTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp AATCTGACAGGACTGATTCAATTCCATCTTCACTGCTaGCCGACTGCTCCTGAAGCCTTCGTGGCAAACTGG +
Preference number: 6 (lower is better)
Translates to: NLTGLIQFHLHC*PTAPEAFVANW
Trigger: CCAGTTTGCCACGAAGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGAATTGAATCAGTCCTGTCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp ACTTGGACTGTCTTCTCTTCTCCCGGAGAGGGGCCTTaGACAAACTCTTCCAGCAGAATGTCATACAGGTTC +
Preference number: 6 (lower is better)
Translates to: TWTVFSSPGEGP*TNSSSRMSYRF
Trigger: GAACCTGTATGACATTCTGCTGGAAGAGTTTGTCAAAGGCCCCTCTCCGGGAGAAGAGAAGACAGTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp GCAGGTTATGTGGCTGCCTTCTCTTCTTGTACTCAGTCATCAGCTTaGAGATGGTCTTGTCAGCGGCCATTGTGCAAATCTTGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: AGYVAAFSSCTQSSA*RWSCQRPLCKSCSL
Trigger: CAGGGAACAAGATTTGCACAATGGCCGCTGACAAGACCATCTCAAAGCTGATGACTGAGTACAAGAAGAGAAGGCAGCCACATAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 72 bp ATCGGAGTCTGTCTCCATGGAGACAAATCTCTCTTCTaGCAGGAGCTTCTGCATTCCTGCCAAAGCATGTTG +
Preference number: 6 (lower is better)
Translates to: IGVCLHGDKSLF*QELLHSCQSML
Trigger: CAACATGCTTTGGCAGGAATGCAGAAGCTCCTGTCAGAAGAGAGATTTGTCTCCATGGAGACAGACTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp TTCACTTGTGCTAGGGCATCACTGGGCTCTTGGGATTaGCTTTCTTCTTTCTCTTCTTGGACACAGGATGCA +
Preference number: 6 (lower is better)
Translates to: FTCARASLGSWD*LSSFSSWTQDA
Trigger: TGCATCCTGTGTCCAAGAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGCCCTAGCACAAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp CAAAATCTGACAGGACTGATTCAATTCCATCTTCACTaGTTGCCGACTGCTCCTGAAGCCTTCGTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: QNLTGLIQFHLH*LPTAPEAFVAN
Trigger: GTTTGCCACGAAGGCTTCAGGAGCAGTCGGCAAGCAGTGAAGATGGAATTGAATCAGTCCTGTCAGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp AGCAGAATGTCATACAGGTTCTGGAGCAGAACTTGGTaGGAGAGCAAGCTAACCACAATCTCCCTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SRMSYRFWSRTW*ESKLTTISLKE
Trigger: CTCTTTCAGGGAGATTGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAACCTGTATGACATTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS GCA 72 bp CTCCTCTCCTCCTCTTCGAATAGCACCTTCTTTACTTaGTCGGCTGTGATAGTTTCTTGGTTGGTGAGAACC +
Preference number: 6 (lower is better)
Translates to: LLSSSSNSTFFT*SAVIVSWLVRT
Trigger: GGTTCTCACCAACCAAGAAACTATCACAGCCGAGCAAGTAAAGAAGGTGCTATTCGAAGAGGAGGAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp AATAGATCTTTTCCTTGGTTCAGACTCAATAGAGCTTaGTCCTGCCAAGTCATACAGACGCTGTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: NRSFPWFRLNRA*SCQVIQTLWAP
Trigger: GGGAGCCCACAGCGTCTGTATGACTTGGCAGGACCAAGCTCTATTGAGTCTGAACCAAGGAAAAGATCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp ACACATCAGACCTCCCTGAGTCCTTTTCTGCCGCCATaGAATACTGATCACAGGAATCAAATTCAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: THQTSLSPFLPP*NTDHRNQIQSS
Trigger: CGAGGACTGAATTTGATTCCTGTGATCAGTATTCCATGGCGGCAGAAAAGGACTCAGGGAGGTCTGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp CTCAACAGCTCAAAGAGTAAATCTAAGGTGGGTGGTTaGTGTTGCCTTGGACAGTTGGACACAGCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: LNSSKSKSKVGG*CCLGQLDTAAV
Trigger: AACAGCAGCTGTGTCCAACTGTCCAAGGCAACACCAACCACCCACCTTAGATTTACTCTTTGAGCTGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp GTGGCTGCCTTCTCTTCTTGTACTCAGTCATCAGCTTaGAGATGGTCTTGTCAGCGGCCATTGTGCAAATCT +
Preference number: 6 (lower is better)
Translates to: VAAFSSCTQSSA*RWSCQRPLCKS
Trigger: AGATTTGCACAATGGCCGCTGACAAGACCATCTCAAAGCTGATGACTGAGTACAAGAAGAGAAGGCAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 90 bp GACAAACTCTTCCAGCAGAATGTCATACAGGTTCTGGAGCAGAACTaGGTGCGAGAGCAAGCTAACCACAATCTCCCTGAAAGAGACACT +
Preference number: 6 (lower is better)
Translates to: DKLFQQNVIQVLEQN*VREQANHNLPERDT
Trigger: AGTGTCTCTTTCAGGGAGATTGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS TCA 72 bp AACCTTCATCACTTCCACCTGCAGGTCCTCATTGAGTaGCGGTGTCACTTTCACTGCATTCAGGATCTGATT +
Preference number: 6 (lower is better)
Translates to: NLHHFHLQVLIE*RCHFHCIQDLI
Trigger: AATCAGATCCTGAATGCAGTGAAAGTGACACCGTCACTCAATGAGGACCTGCAGGTGGAAGTGATGAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp GTAAAACCTTCATCACTTCCACCTGCAGGTCCTCATTaGGTGACGGTGTCACTTTCACTGCATTCAGGATCT +
Preference number: 6 (lower is better)
Translates to: VKPSSLPPAGPH*VTVSLSLHSGS
Trigger: AGATCCTGAATGCAGTGAAAGTGACACCGTCACTCAATGAGGACCTGCAGGTGGAAGTGATGAAGGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp CATCACAAAGGGCCTCTACTGTTAAGCCTTGACTCCTaGATTCCTGTGGGGCATCTGGGTTTTCAATTATCG +
Preference number: 6 (lower is better)
Translates to: HHKGPLLLSLDS*IPVGHLGFQLS
Trigger: CGATAATTGAAAACCCAGATGCCCCACAGGAATTCAGGAGTCAAGGCTTAACAGTAGAGGCCCTTTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp AGTTGGACACAGCTGCTGTTAGCTGCTCCAACAGGATaGTCCAGACTTCTATCAGACCAGTGTCATCATCAA +
Preference number: 6 (lower is better)
Translates to: SWTQLLLAAPTG*SRLLSDQCHHQ
Trigger: TTGATGATGACACTGGTCTGATAGAAGTCTGGATCATCCTGTTGGAGCAGCTAACAGCAGCTGTGTCCAACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS TCA 72 bp TGGCTGCCTTCTCTTCTTGTACTCAGTCATCAGCTTTaGGATGGTCTTGTCAGCGGCCATTGTGCAAATCTT +
Preference number: 6 (lower is better)
Translates to: WLPSLLVLSHQL*DGLVSGHCANL
Trigger: AAGATTTGCACAATGGCCGCTGACAAGACCATCTCAAAGCTGATGACTGAGTACAAGAAGAGAAGGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CCA 72 bp TTGACAAACTCTTCCAGCAGAATGTCATACAGGTTCTaGAGCAGAACTTGGTGCGAGAGCAAGCTAACCACA +
Preference number: 6 (lower is better)
Translates to: LTNSSSRMSYRF*SRTWCESKLTT
Trigger: TGTGGTTAGCTTGCTCTCGCACCAAGTTCTGCTCCAGAACCTGTATGACATTCTGCTGGAAGAGTTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215836.2
CDS CAA 72 bp AGTAAAACCTTCATCACTTCCACCTGCAGGTCCTCATaGAGTGACGGTGTCACTTTCACTGCATTCAGGATC +
Preference number: 6 (lower is better)
Translates to: SKTFITSTCRSS*SDGVTFTAFRI
Trigger: GATCCTGAATGCAGTGAAAGTGACACCGTCACTCAATGAGGACCTGCAGGTGGAAGTGATGAAGGTTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 72 bp GTAGCTGCGTTAGCAAAGACCTGGATGTTGTCGGTATaGAGAAAAGCTTCAAACACATCGAACACAGGAGCC +
Preference number: 6 (lower is better)
Translates to: VAALAKTWMLSV*RKASNTSNTGA
Trigger: GGCTCCTGTGTTCGATGTGTTTGAAGCTTTTCTCAATACCGACAACATCCAGGTCTTTGCTAACGCAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CCA 72 bp GCTCCACTTTTAGTTTCACTTGTGCTAGGGCATCACTaGGCTCTTGGGATTGCCTTTCTTCTTTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: APLLVSLVLGHH*ALGIAFLLSLL
Trigger: AAGAAGAGAAAGAAGAAAGGCAATCCCAAGAGCCCAGTGATGCCCTAGCACAAGTGAAACTAAAAGTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS CAA 90 bp CATGGAATACTGATCACAGGAATCAAATTCAGTCCTCGACAGGTCTaGGTCATCTACACTGAAGTTGCTCTCACTATACCTAGATCCGTA +
Preference number: 6 (lower is better)
Translates to: HGILITGIKFSPRQV*VIYTEVALTIPRSV
Trigger: TACGGATCTAGGTATAGTGAGAGCAACTTCAGTGTAGATGACCAAGACCTGTCGAGGACTGAATTTGATTCCTGTGATCAGTATTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2
CDS GCA 72 bp GACAAATTTCATAAGGCACATGATGTAACTAGTAGCTaGGTTAGCAAAGACCTGGATGTTGTCGGTATTGAG +
Preference number: 6 (lower is better)
Translates to: DKFHKAHDVTSS*VSKDLDVVGIE
Trigger: CTCAATACCGACAACATCCAGGTCTTTGCTAACGCAGCTACTAGTTACATCATGTGCCTTATGAAATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000019999.7
ENSMUST00000215836.2