Pregenerated sensors for ARF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020440Ensembl transcript IDs: ENSMUST00000020717.12, ENSMUST00000169841.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAAGAGTGGGGAGGAAGGGCACTGCCTGAGGAGTCCGGGAGTCTaGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: RKSGEEGHCLRSPGV*SSRDARGSFRAAGA Trigger: GGCCCCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTCCTCAGGCAGTGCCCTTCCTCCCCACTCTTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| 3UTR CCA 90 bp | CAAATTAAATCCAGATCCCTGCTCCTCCCCTGGAAGAGGGGGCCTTaGCCAGGAAGCCCATCCACAGGTCCCAGCAGGCAGGAGAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: QIKSRSLLLPWKRGP*PGSPSTGPSRQESR Trigger: TCTGCTCTCCTGCCTGCTGGGACCTGTGGATGGGCTTCCTGGCCAAGGCCCCCTCTTCCAGGGGAGGAGCAGGGATCTGGATTTAATTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020717.12 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCGCTGGTCATCCCGGGATaGACGCGGGAGCTTCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: PREQGSRLQRQERACRQALVIPG*TRELPG Trigger: GCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAG...CGCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCGAGGAGTCCGGGAGTCTaGTCATCCCGGGATGCACGC | + |
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Preference number: 2 (lower is better) Translates to: PREQGSRLQRQERACRQARSPGV*SSRDAR Trigger: GCGTGCATCCCGGGATGACCAGACTCCCGGACTCCT...CGCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCGCAGGAAGGAAGGGCACTGCCTaGGGAGTCCGGGAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RARLQAPTTRESMQAGAGRKGTA*GVRESG Trigger: ACCAGACTCCCGGACTCCTCAGGCAGTGCCCTTCCT...TCCTGCGCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGAGGAGTCCGGGAGTCTaGTCATCCCGGGATGCACGC | + |
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Preference number: 2 (lower is better) Translates to: CPESKAPGSNDKREHAGRRSPGV*SSRDAR Trigger: GCGTGCATCCCGGGATGACCAGACTCCCGGACTCCT...CCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAACCACAGCAAATTTATTACTCAATATCCAGTTCCACGTCATAGCACCACCGCAGAGGCCTGTCTGTaGGGAGGAAGAGTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TNHSKFITQYPVPRHSTTAEACL*GGRVGR Trigger: CCTCCCCACTCTTCCTCCCCACAGACAGGCCTCTGC...GGTGGTGCTATGACGTGGAACTGGATATTGAGTAATAAATTTGCTGTGGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020717.12 |
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| 3UTR GCA 72 bp | CTGCCTGAGGAGTCCGGGAGTCTGGTCATCCCGGGATaGACGCGGGAGCTTCCGGGCAGCAGGGGCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LPEESGSLVIPG*TRELPGSRGLP Trigger: GGGCAGGCCCCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTCCTCAGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| 3UTR CCA 72 bp | TCCAGATCCCTGCTCCTCCCCTGGAAGAGGGGGCCTTaGCCAGGAAGCCCATCCACAGGTCCCAGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SRSLLLPWKRGP*PGSPSTGPSRQ Trigger: CTGCCTGCTGGGACCTGTGGATGGGCTTCCTGGCCAAGGCCCCCTCTTCCAGGGGAGGAGCAGGGATCTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020717.12 |
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| CDS-3UTR CCA 90 bp | TCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGGGCTACAGGCCTGTGCCTTaGGTGGCACAGGTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SGSLVIPGCTRELPGSRGYRPVP*VAQVAW Trigger: CCAGGCCACCTGTGCCACCCAAGGCACAGGCCTGTA...GCCCCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | GAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGCTTGGGTGGCACAGGTaGCCTGGACGTACCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: ESGSLVIPGCTRELPGSRLGWHR*PGRTTC Trigger: GCACGTGGTACGTCCAGGCCACCTGTGCCACCCAAG...CCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCTCATCAGCAGACTCCTaGACCCGCTCCCGGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: PEESGSLVIPGCTRELPGSSADS*TRSRSL Trigger: CAACGACCGGGAGCGGGTCCAGGAGTCTGCTGATGA...GCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTCCTCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | GAAGGGCACTGCCTGAGGAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGGTGGCACAGGTGGCCTaGACGTACCACGTGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: EGHCLRSPGVWSSRDARGVAQVA*TYHVRL Trigger: TAGCCGCACGTGGTACGTCCAGGCCACCTGTGCCAC...CCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTCCTCAGGCAGTGCCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR TCA 90 bp | CCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCGCGGCTACGCAGGTGCTaGAGGCCCAGCTTGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PREQGSRLQRQERACRQARLRRC*RPSLSV Trigger: GACTGACAAGCTGGGCCTTCAGCACCTGCGTAGCCG...CGCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCGTGGCACAGGTGGCCTaGACGTACCACGTGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: AQRARLQAPTTRESMQAGVAQVA*TYHVRL Trigger: TAGCCGCACGTGGTACGTCCAGGCCACCTGTGCCAC...GCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR TCA 90 bp | CTGTGCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCCGGCTACGCAGGTGCTaGAGGCCCAGCTTGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LCPESKAPGSNDKREHAGRLRRC*RPSLSV Trigger: GACTGACAAGCTGGGCCTTCAGCACCTGCGTAGCCG...GCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCTCATCAGCAGACTCCTaGACCCGCTCCCGGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: AQRARLQAPTTRESMQAGSSADS*TRSRSL Trigger: CAACGACCGGGAGCGGGTCCAGGAGTCTGCTGATGA...GCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCTCCTGCAGCATCTTCTaGAGTTCATCAGCAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: PEESGSLVIPGCTRELPGSCSIF*SSSADS Trigger: GGAGTCTGCTGATGAACTCCAGAAGATGCTGCAGGA...GCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTCCTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | GAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGTCCTGCAGCATCTTCTaGAGTTCATCAGCAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: ESGSLVIPGCTRELPGSRSCSIF*SSSADS Trigger: GGAGTCTGCTGATGAACTCCAGAAGATGCTGCAGGA...CCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCGCTCGCTCACGGGCATaGCATTGGGCATGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AQRARLQAPTTRESMQAGARSRA*HWACPA Trigger: AGCAGGACATGCCCAATGCCATGCCCGTGAGCGAGC...GCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | CTGTGCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCCTTGGGTGGCACAGGTaGCCTGGACGTACCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCPESKAPGSNDKREHAGLGWHR*PGRTTC Trigger: GCACGTGGTACGTCCAGGCCACCTGTGCCACCCAAG...GCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CCA 90 bp | CTGTGCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCTACAGGCCTGTGCCTTaGGTGGCACAGGTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCPESKAPGSNDKREHAGYRPVP*VAQVAW Trigger: CCAGGCCACCTGTGCCACCCAAGGCACAGGCCTGTA...GCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCTGTCTACCACAAAGATaGGGCCCTGAGTGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AQRARLQAPTTRESMQAGCLPQR*GPECSG Trigger: TCCAGAACACTCAGGGCCTCATCTTTGTGGTAGACA...GCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR TCA 90 bp | TGCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGTGTCTACCACAAAGATaGGGCCCTGAGTGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CPESKAPGSNDKREHAGRCLPQR*GPECSG Trigger: TCCAGAACACTCAGGGCCTCATCTTTGTGGTAGACA...CCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | CCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGGGCCATACAGGCCTGTGCCTaGGGTGGCACAGGTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGVWSSRDARGSFRAAGAIQACA*GGTGGL Trigger: CAGGCCACCTGTGCCACCCAAGGCACAGGCCTGTAT...GGCCCCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | GAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGTACAGGATGGTAGTCTaGCCAGCCGCATCCAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ESGSLVIPGCTRELPGSRYRMVV*PAASKP Trigger: TGGCTTGGATGCGGCTGGCAAGACTACCATCCTGTA...CCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | CCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCAGGGGCCTCCACTGTTTCCACATaGAAGCCTATAGTGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: PGVWSSRDARGSFRAAGASTVST*KPIVGM Trigger: CATCCCCACTATAGGCTTCAATGTGGAAACAGTGGA...GGCCCCTGCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGCAGGCATACAGGCCTGTGCCTaGGGTGGCACAGGTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AQRARLQAPTTRESMQAGIQACA*GGTGGL Trigger: CAGGCCACCTGTGCCACCCAAGGCACAGGCCTGTAT...GCCTGCCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGTCCGGGAGTCTGGTCATCCCGGGATGCACGCGGGAGCTTCCGGGCAGCTCCACTGTTTCCACATaGAAGCCTATAGTGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: EESGSLVIPGCTRELPGSSTVST*KPIVGM Trigger: CATCCCCACTATAGGCTTCAATGTGGAAACAGTGGA...GCTGCCCGGAAGCTCCCGCGTGCATCCCGGGATGACCAGACTCCCGGACTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGCCCAGAGAGCAAGGCTCCAGGCTCCAACGACAAGAGAGAGCATGCAGGTACAGGATGGTAGTCTaGCCAGCCGCATCCAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SVPREQGSRLQRQERACRYRMVV*PAASKP Trigger: TGGCTTGGATGCGGCTGGCAAGACTACCATCCTGTA...CCTGCATGCTCTCTCTTGTCGTTGGAGCCTGGAGCCTTGCTCTCTGGGCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020717.12 ENSMUST00000169841.2 |
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| CDS-3UTR CAA 90 bp | ACAAACCACAGCAAATTTATTACTCAATATCCAGTTCCACGTCATAGCACCACCACCCGCTCCCGGTCGTaGCTGTCTACCACAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: TNHSKFITQYPVPRHSTTTRSRS*LSTTKM Trigger: CATCTTTGTGGTAGACAGCAACGACCGGGAGCGGGT...GGTGGTGCTATGACGTGGAACTGGATATTGAGTAATAAATTTGCTGTGGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020717.12 |
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