Pregenerated sensors for ARF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051853Ensembl transcript IDs: ENSMUST00000053183.12
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGGGAGGAGGGAGGAGGAGGAGGAGGAGGAAGGCAAGGCGCTTaGTGGGCATGTGGACATGATACCCAGGACCTTGGCCACTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: RREEGGGGGGGRQGA*WACGHDTQDLGHFQ Trigger: TTGAAAGTGGCCAAGGTCCTGGGTATCATGTCCACATGCCCAGCAAGCGCCTTGCCTTCCTCCTCCTCCTCCTCCTCCCTCCTCCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | AGGGAGGAGGGAGGAGGAGGAGGAGGAGGAAGGCAAGGCGCTTGCTaGGCATGTGGACATGATACCCAGGACCTTGGCCACTTTCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: REEGGGGGGGRQGAC*ACGHDTQDLGHFQE Trigger: CTCTTGAAAGTGGCCAAGGTCCTGGGTATCATGTCCACATGCCCAGCAAGCGCCTTGCCTTCCTCCTCCTCCTCCTCCTCCCTCCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | CCAAGCTGCAGAGAGCCCAGGGTCCTGACCTTAGCAGAGAGGTTATaGGCAGCTGTTTTGGAGCTCAGGGCGCAGCCAGCACACACAGGA | + |
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Preference number: 1 (lower is better) Translates to: PSCREPRVLTLAERL*AAVLELRAQPAHTG Trigger: TCCTGTGTGTGCTGGCTGCGCCCTGAGCTCCAAAACAGCTGCCCATAACCTCTCTGCTAAGGTCAGGACCCTGGGCTCTCTGCAGCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | CCACTGAGTGGAGGAACTCAGAACAGGCCTCTGGGAAGAGTCCCTTaGCCAAGCTGCAGAGAGCCCAGGGTCCTGACCTTAGCAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PLSGGTQNRPLGRVP*PSCREPRVLTLAER Trigger: CCTCTCTGCTAAGGTCAGGACCCTGGGCTCTCTGCAGCTTGGCCAAGGGACTCTTCCCAGAGGCCTGTTCTGAGTTCCTCCACTCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR TCA 90 bp | GAGGGCGGCACCACGCCTTTCCTCTGTGTGGAACGGTGTCTTCAGTaGCAGCCGGAGACACCAGAGCAATGGAACAGGAACGGGAATGTA | + |
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Preference number: 1 (lower is better) Translates to: EGGTTPFLCVERCLQ*QPETPEQWNRNGNV Trigger: TACATTCCCGTTCCTGTTCCATTGCTCTGGTGTCTCCGGCTGTCACTGAAGACACCGTTCCACACAGAGGAAAGGCGTGGTGCCGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR GCA 90 bp | GACAGATGGCCGAAGGCGCCCATCATGTATCCCAACATCCAGGAATaGCACCTGCAGAGAGGAAAACAACGGGACCCACCCACATCCCCT | + |
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Preference number: 1 (lower is better) Translates to: DRWPKAPIMYPNIQE*HLQRGKQRDPPTSP Trigger: AGGGGATGTGGGTGGGTCCCGTTGTTTTCCTCTCTGCAGGTGGCATTCCTGGATGTTGGGATACATGATGGGCGCCTTCGGCCATCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR GCA 90 bp | ACCTCGCACAGCTCAGCTGACGGTAGGCTGGGGAACCTATCTGCCTaGTATAGACAAAGGTGGCAAGAAACCTGGCCACTGAGTGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: TSHSSADGRLGNLSA*YRQRWQETWPLSGG Trigger: TCCTCCACTCAGTGGCCAGGTTTCTTGCCACCTTTGTCTATAGCAGGCAGATAGGTTCCCCAGCCTACCGTCAGCTGAGCTGTGCGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | GCTGACGGTAGGCTGGGGAACCTATCTGCCTGCTATAGACAAAGGTaGCAAGAAACCTGGCCACTGAGTGGAGGAACTCAGAACAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: ADGRLGNLSACYRQR*QETWPLSGGTQNRP Trigger: AGGCCTGTTCTGAGTTCCTCCACTCAGTGGCCAGGTTTCTTGCCACCTTTGTCTATAGCAGGCAGATAGGTTCCCCAGCCTACCGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | ATGTTTACCCCATGTTTACTGTCCTGCCCAGATGAGTCAGCGTGGTaGCGCACGCGTTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: MFTPCLLSCPDESAW*RTRFNSSTWEAEAG Trigger: GCCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAACGCGTGCGCCACCACGCTGACTCATCTGGGCAGGACAGTAAACATGGGGTAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR GCA 90 bp | TTACCAAGGTGCTACTGCTCCCTGCTGGATGTGTCTGGAGCAGCATaGACCAAGGCAACATTCAAGGCTGCTTTAGCCTGCTCAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LPRCYCSLLDVSGAA*TKATFKAALACSAS Trigger: TGAGGCTGAGCAGGCTAAAGCAGCCTTGAATGTTGCCTTGGTGCATGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCACCTTGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR TCA 90 bp | GTCAGTCCTCATCAGGCCAGCAGAACTACTAAGGGGAAAGATCTCTaGCAGACCAGAAGGCAGGAACAGGACTGCTCCATGCCTTACCTT | + |
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Preference number: 1 (lower is better) Translates to: VSPHQASRTTKGKDL*QTRRQEQDCSMPYL Trigger: AAGGTAAGGCATGGAGCAGTCCTGTTCCTGCCTTCTGGTCTGTCAGAGATCTTTCCCCTTAGTAGTTCTGCTGGCCTGATGAGGACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | AATGCAGGGAATGGAAGGAACCCATTTAAAATGGAACAGAATCCCTaGCACCCCCATGTAGAGAACACACACACACACTCACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: NAGNGRNPFKMEQNP*HPHVENTHTHSHTH Trigger: GTGTGTGTGTGAGTGTGTGTGTGTGTTCTCTACATGGGGGTGCCAGGGATTCTGTTCCATTTTAAATGGGTTCCTTCCATTCCCTGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 90 bp | AAAACCTATCTGGAACTAGCATCTAAGCAGGAAGGTCAGAAAGTGTaGCAGAGCAAAAGGCAAAGTCCTCACCAATCTCAAAGCAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: KTYLELASKQEGQKV*QSKRQSPHQSQSKD Trigger: ATCTTTGCTTTGAGATTGGTGAGGACTTTGCCTTTTGCTCTGCCACACTTTCTGACCTTCCTGCTTAGATGCTAGTTCCAGATAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR TCA 90 bp | GCTTACTGTAACTTTGCTACTGTTATGAATCATGATGTAAATGTTTaGTATGCAGGATATCTGATATGTGACCCTCAAAGGGGTCACAAC | + |
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Preference number: 1 (lower is better) Translates to: AYCNFATVMNHDVNV*YAGYLICDPQRGHN Trigger: GTTGTGACCCCTTTGAGGGTCACATATCAGATATCCTGCATATCAAACATTTACATCATGATTCATAACAGTAGCAAAGTTACAGTAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CAA 90 bp | GAGCCCAGGGTCCTGACCTTAGCAGAGAGGTTATGGGCAGCTGTTTaGGAGCTCAGGGCGCAGCCAGCACACACAGGAGCCCACAGAACA | + |
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Preference number: 2 (lower is better) Translates to: EPRVLTLAERLWAAV*ELRAQPAHTGAHRT Trigger: TGTTCTGTGGGCTCCTGTGTGTGCTGGCTGCGCCCTGAGCTCCAAAACAGCTGCCCATAACCTCTCTGCTAAGGTCAGGACCCTGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CAA 90 bp | GCCACTGAGTGGAGGAACTCAGAACAGGCCTCTGGGAAGAGTCCCTaGGCCAAGCTGCAGAGAGCCCAGGGTCCTGACCTTAGCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ATEWRNSEQASGKSP*AKLQRAQGPDLSRE Trigger: CTCTCTGCTAAGGTCAGGACCCTGGGCTCTCTGCAGCTTGGCCAAGGGACTCTTCCCAGAGGCCTGTTCTGAGTTCCTCCACTCAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCCCACAGAACAGCCACAGCTTCAGTGCAGTGACAAGTCAGGACCCAGGTCTCCCTCTGAGTTCCTaGGGAGCAGATCTGAGGACG | + |
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Preference number: 2 (lower is better) Translates to: RSPQNSHSFSAVTSQDPGLPLSS*GADLRT Trigger: CGTCCTCAGATCTGCTCCTCAGGAACTCAGAGGGAG...ACCTGGGTCCTGACTTGTCACTGCACTGAAGCTGTGGCTGTTCTGTGGGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTACTGCTCCCTGCTGGATGTGTCTGGAGCAGCATGCACCAAGGCAACATACCTGCAGCAGCAGCTaGACAAGCAGAGGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GATAPCWMCLEQHAPRQHTCSSS*TSRGWR Trigger: CCTCCATCCTCTGCTTGTTCAGCTGCTGCTGCAGGT...ATGTTGCCTTGGTGCATGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCCTGAAGATCACAGTTCCAGGCTCAGCCATGCAGGGTCCTACGGCATCTGGAAGGCAAGGCGCTTaGTGGGCATGTGGACATGAT | + |
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Preference number: 2 (lower is better) Translates to: RALKITVPGSAMQGPTASGRQGA*WACGHD Trigger: ATCATGTCCACATGCCCAGCAAGCGCCTTGCCTTCC...AGATGCCGTAGGACCCTGCATGGCTGAGCCTGGAACTGTGATCTTCAGGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | AAGATGCACCCAAGACATCCCTTCGAGTTAGCTGCCTGGCAACAGGATCCACACGTCCCTTGGCCAAGCTaGAGAGAGCCCAGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KMHPRHPFELAAWQQDPHVPWPS*REPRVL Trigger: CAGGACCCTGGGCTCTCTGCAGCTTGGCCAAGGGAC...GTGTGGATCCTGTTGCCAGGCAGCTAACTCGAAGGGATGTCTTGGGTGCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCCTGAAGATCACAGTTCCAGGCTCAGCCATGCAGGGTCCTACGGCATCTTCCAGGAATGCCACCTaGAGAGAGGAAAACAACGGG | + |
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Preference number: 2 (lower is better) Translates to: RALKITVPGSAMQGPTASSRNAT*REENNG Trigger: CCCGTTGTTTTCCTCTCTGCAGGTGGCATTCCTGGA...AGATGCCGTAGGACCCTGCATGGCTGAGCCTGGAACTGTGATCTTCAGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | CGTGCACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCACTGGGAAGAGTCCCTTaGCCAAGCTGCAGAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: RAPGCFMLRKASSLLSCPLGRVP*PSCREP Trigger: GGGCTCTCTGCAGCTTGGCCAAGGGACTCTTCCCAG...TGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGTGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | GAGAAAAGGAACGGTGTGGAAAGGACCACACAGCTCCCTACTGCCGCAGTGTTGGGGAAGGGACTCAGATaGCAAGAGCACAGCAACCAG | + |
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Preference number: 2 (lower is better) Translates to: EKRNGVERTTQLPTAAVLGKGLR*QEHSNQ Trigger: CTGGTTGCTGTGCTCTTGGCATCTGAGTCCCTTCCC...CAACACTGCGGCAGTAGGGAGCTGTGTGGTCCTTTCCACACCGTTCCTTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | CGTGCACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCACATCAGGACAGCAGTTaGGGGCTGACCGTGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RAPGCFMLRKASSLLSCPHQDSS*GLTVSV Trigger: CACTGACACGGTCAGCCCCCAACTGCTGTCCTGATG...TGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGTGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTGCCTGGCAACAGGATCCACACAGCCTCGTGCACCTGGCTGCTTTATGCAAGAAACCTGGCCACTaGGTGGAGGAACTCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: LAAWQQDPHSLVHLAALCKKPGH*VEELRT Trigger: TGTTCTGAGTTCCTCCACTCAGTGGCCAGGTTTCTT...GCATAAAGCAGCCAGGTGCACGAGGCTGTGTGGATCCTGTTGCCAGGCAGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGATGGATTAGGGAATGTAGAAAGCACCCCCACCTCCCCACAAAGCCAGGGATATGGGCAGCTGTTTTaGAGCTCAGGGCGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KDGLGNVESTPTSPQSQGYGQLF*SSGRSQ Trigger: CTGGCTGCGCCCTGAGCTCCAAAACAGCTGCCCATA...TCCCTGGCTTTGTGGGGAGGTGGGGGTGCTTTCTACATTCCCTAATCCATCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAATGCCACCTGCAGAGAGGAAAACAACGGGACCCACCCACATCCCCTTAGAGCACAGCAACCAGTaGCAAACAGCAAACAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PGMPPAERKTTGPTHIPLEHSNQ*QTANRE Trigger: TTCTCTGTTTGCTGTTTGGCACTGGTTGCTGTGCTC...TAAGGGGATGTGGGTGGGTCCCGTTGTTTTCCTCTCTGCAGGTGGCATTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCCACAGAACAGCCACAGCTTCAGTGCAGTGACAAGTCAGGACCCAGGTGGAAGAAGGGAAAATTaGGGTAAGGAGACAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RSPQNSHSFSAVTSQDPGGRREN*GKETAG Trigger: ACCTGCTGTCTCCTTACCCCAATTTTCCCTTCTTCC...ACCTGGGTCCTGACTTGTCACTGCACTGAAGCTGTGGCTGTTCTGTGGGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGCTGCCTGGCAACAGGATCCACACAGCCTCGTGCACCTGGCTGCTTTATGCGGAACCCATTTAAAATaGAACAGAATCCCTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: LAAWQQDPHSLVHLAALCGTHLK*NRIPGT Trigger: GGTGCCAGGGATTCTGTTCCATTTTAAATGGGTTCC...GCATAAAGCAGCCAGGTGCACGAGGCTGTGTGGATCCTGTTGCCAGGCAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | AAGATGCACCCAAGACATCCCTTCGAGTTAGCTGCCTGGCAACAGGATCCACACGAGCTCTTTAGGAGTTaGTCAGTCATAGAGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: KMHPRHPFELAAWQQDPHELFRS*SVIEPP Trigger: TGGGGGCTCTATGACTGACCAACTCCTAAAGAGCTC...GTGTGGATCCTGTTGCCAGGCAGCTAACTCGAAGGGATGTCTTGGGTGCATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAGATGTCAGCACTACTTGCACTaGGAGACATCCTGGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: TWLLYAEEGIQFTVLSRCQHYLH*ETSWNL Trigger: GAGGTTCCAGGATGTCTCTCAGTGCAAGTAGTGCTG...ACATCTGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | CGTGCACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAAACAGGACTGCTCCATaGCTTACCTTCTCCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: RAPGCFMLRKASSLLSCPNRTAP*LTFSSL Trigger: TAAGGAGGAGAAGGTAAGGCATGGAGCAGTCCTGTT...TGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGTGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGATGGATTAGGGAATGTAGAAAGCACCCCCACCTCCCCACAAAGCCAGGGATTACCAAGGTGCTACTaGTCCCTGCTGGATGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KDGLGNVESTPTSPQSQGLPRCY*SLLDVS Trigger: AGACACATCCAGCAGGGAGCAGTAGCACCTTGGTAA...TCCCTGGCTTTGTGGGGAGGTGGGGGTGCTTTCTACATTCCCTAATCCATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACTAGCATCTAAGCAGGAAGGTCAGAAAGTGTGGCAGAGCAAAAGGCAAAGGCAAGGCGCTTGCTaGGCATGTGGACATGATACC | + |
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Preference number: 2 (lower is better) Translates to: LELASKQEGQKVWQSKRQRQGAC*ACGHDT Trigger: GGTATCATGTCCACATGCCCAGCAAGCGCCTTGCCT...TTGCCTTTTGCTCTGCCACACTTTCTGACCTTCCTGCTTAGATGCTAGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CAA 90 bp | GTTTTAAATCCAGTAAATTGGAATGATTCATCATCAGGACAGCAGTaGGGGGCTGACCGTGTCAGTGTACAGGGAGGGAGGAGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VLNPVNWNDSSSGQQ*GADRVSVQGGRREE Trigger: CTCCTCCCTCCTCCCTCCCTGTACACTGACACGGTCAGCCCCCAACTGCTGTCCTGATGATGAATCATTCCAATTTACTGGATTTAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACTAGCATCTAAGCAGGAAGGTCAGAAAGTGTGGCAGAGCAAAAGGCAATCTCGTTACTCCACTTaGTCAGTCCTCATCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LELASKQEGQKVWQSKRQSRYST*SVLIRP Trigger: TGGCCTGATGAGGACTGACCAAGTGGAGTAACGAGA...TTGCCTTTTGCTCTGCCACACTTTCTGACCTTCCTGCTTAGATGCTAGTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | CCCAGATGTTTACCCTGTGCTTACTGTAACTTTGCTACTGTTATGAATCATGATAGGGAGGGAGGGCCCTaGAGATCACAGTTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PRCLPCAYCNFATVMNHDREGGP*RSQFQA Trigger: AGCCTGGAACTGTGATCTTCAGGGCCCTCCCTCCCT...ATCATGATTCATAACAGTAGCAAAGTTACAGTAAGCACAGGGTAAACATCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAGATGTAGGATATCTGATATGTaGCCCTCAAAGGGGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: TWLLYAEEGIQFTVLSRCRISDM*PSKGSQ Trigger: TTGTGACCCCTTTGAGGGTCACATATCAGATATCCT...ACATCTGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | CGTGCACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAGAGTGGACTCATGTCTaGAATGTACAAAACCTATCT | + |
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Preference number: 2 (lower is better) Translates to: RAPGCFMLRKASSLLSCPEWTHV*NVQNLS Trigger: AGATAGGTTTTGTACATTGCAGACATGAGTCCACTC...TGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGTGCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR CCA 90 bp | CCCAGATGTTTACCCTGTGCTTACTGTAACTTTGCTACTGTTATGAATCATGATGGACAGGGTGAGGACTaGGGAAAGCTGCCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRCLPCAYCNFATVMNHDGQGED*GKLPGR Trigger: CCTTCCTGGCAGCTTTCCCCAGTCCTCACCCTGTCC...ATCATGATTCATAACAGTAGCAAAGTTACAGTAAGCACAGGGTAAACATCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR TCA 90 bp | CCCAGATGTTTACCCTGTGCTTACTGTAACTTTGCTACTGTTATGAATCATGATCTGGGCATGTGGACATaGTACCCAGGACCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRCLPCAYCNFATVMNHDLGMWT*YPGPWP Trigger: TGGCCAAGGTCCTGGGTATCATGTCCACATGCCCAG...ATCATGATTCATAACAGTAGCAAAGTTACAGTAAGCACAGGGTAAACATCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAGATGTATTTACCATTTTCTATaGTGCCCAGATGTTTACCCT | + |
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Preference number: 2 (lower is better) Translates to: TWLLYAEEGIQFTVLSRCIYHFL*CPDVYP Trigger: AGGGTAAACATCTGGGCAGCATAGAAAATGGTAAAT...ACATCTGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR GCA 72 bp | GAGGGAGGAGGAGGAGGAGGAGGAAGGCAAGGCGCTTaGTGGGCATGTGGACATGATACCCAGGACCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: EGGGGGGGRQGA*WACGHDTQDLG Trigger: GCCAAGGTCCTGGGTATCATGTCCACATGCCCAGCAAGCGCCTTGCCTTCCTCCTCCTCCTCCTCCTCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 72 bp | GGAGGAGGAGGAGGAGGAGGAAGGCAAGGCGCTTGCTaGGCATGTGGACATGATACCCAGGACCTTGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GGGGGGGRQGAC*ACGHDTQDLGH Trigger: GTGGCCAAGGTCCTGGGTATCATGTCCACATGCCCAGCAAGCGCCTTGCCTTCCTCCTCCTCCTCCTCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR GCA 72 bp | CCCCACCTCCCCACAAAGCCAGGGATGTTACCAAGGTaGTACTGCTCCCTGCTGGATGTGTCTGGAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PHLPTKPGMLPR*YCSLLDVSGAA Trigger: TGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCACCTTGGTAACATCCCTGGCTTTGTGGGGAGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 72 bp | AGAGAGCCCAGGGTCCTGACCTTAGCAGAGAGGTTATaGGCAGCTGTTTTGGAGCTCAGGGCGCAGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: REPRVLTLAERL*AAVLELRAQPA Trigger: TGCTGGCTGCGCCCTGAGCTCCAAAACAGCTGCCCATAACCTCTCTGCTAAGGTCAGGACCCTGGGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
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| 3UTR CCA 72 bp | GGAGGAACTCAGAACAGGCCTCTGGGAAGAGTCCCTTaGCCAAGCTGCAGAGAGCCCAGGGTCCTGACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GGTQNRPLGRVP*PSCREPRVLTL Trigger: TAAGGTCAGGACCCTGGGCTCTCTGCAGCTTGGCCAAGGGACTCTTCCCAGAGGCCTGTTCTGAGTTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | TGCTTACTGAGGGCGGCACCACGCCTTTCCTCTGTGTaGAACGGTGTCTTCAGTGACAGCCGGAGACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLLRAAPRLSSV*NGVFSDSRRHQ Trigger: CTGGTGTCTCCGGCTGTCACTGAAGACACCGTTCCACACAGAGGAAAGGCGTGGTGCCGCCCTCAGTAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CCGAAGGCGCCCATCATGTATCCCAACATCCAGGAATaGCACCTGCAGAGAGGAAAACAACGGGACCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PKAPIMYPNIQE*HLQRGKQRDPP Trigger: GGGTGGGTCCCGTTGTTTTCCTCTCTGCAGGTGGCATTCCTGGATGTTGGGATACATGATGGGCGCCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CTCCCCACAAAGCCAGGGATGTTACCAAGGTGCTACTaGTCCCTGCTGGATGTGTCTGGAGCAGCATGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LPTKPGMLPRCY*SLLDVSGAACT Trigger: GGTGCATGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCACCTTGGTAACATCCCTGGCTTTGTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | AAGGAACGGTGTGGAAAGGACCACACAGCTCCCTACTaGCGCAGTGTTGCTCAAGGACAAAGGGCTGCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KERCGKDHTAPY*RSVAQGQRAAP Trigger: TGGCGCAGCCCTTTGTCCTTGAGCAACACTGCGGCAGTAGGGAGCTGTGTGGTCCTTTCCACACCGTTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CGCCCATCATGTATCCCAACATCCAGGAATGCCACCTaGAGAGAGGAAAACAACGGGACCCACCCACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: RPSCIPTSRNAT*REENNGTHPHP Trigger: GGGATGTGGGTGGGTCCCGTTGTTTTCCTCTCTGCAGGTGGCATTCCTGGATGTTGGGATACATGATGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | AAGATGCACCCAAGACATCCCTTCGAGTTAGCTGCCTaGCAACAGGATCCACACAGCCTCGTGCACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KMHPRHPFELAA*QQDPHSLVHLA Trigger: AGCCAGGTGCACGAGGCTGTGTGGATCCTGTTGCCAGGCAGCTAACTCGAAGGGATGTCTTGGGTGCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | AGGAGGAAGGCAAGGCGCTTGCTGGGCATGTGGACATaGTACCCAGGACCTTGGCCACTTTCAAGAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRKARRLLGMWT*YPGPWPLSRGR Trigger: TCTTCCTCTTGAAAGTGGCCAAGGTCCTGGGTATCATGTCCACATGCCCAGCAAGCGCCTTGCCTTCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | CCCAATAAACCTGCGTTCCGCCATGACTCCACGCGCTaGGGTGTGTCTTCCCACCTCTGCAGAGAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PNKPAFRHDSTR*GVSSHLCREKE Trigger: TTCCTTTTCTCTGCAGAGGTGGGAAGACACACCTCAGCGCGTGGAGTCATGGCGGAACGCAGGTTTATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | ACCACGCCTTTCCTCTGTGTGGAACGGTGTCTTCAGTaGCAGCCGGAGACACCAGAGCAATGGAACAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TTPFLCVERCLQ*QPETPEQWNRN Trigger: GTTCCTGTTCCATTGCTCTGGTGTCTCCGGCTGTCACTGAAGACACCGTTCCACACAGAGGAAAGGCGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CACACACAGGAGCCCACAGAACAGCCACAGCTTCAGTaGAGTGACAAGTCAGGACCCAGGTCAGATCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HTQEPTEQPQLQ*SDKSGPRSDLL Trigger: CAGAAGATCTGACCTGGGTCCTGACTTGTCACTGCACTGAAGCTGTGGCTGTTCTGTGGGCTCCTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | AGCTCAGCTGACGGTAGGCTGGGGAACCTATCTGCCTaGTATAGACAAAGGTGGCAAGAAACCTGGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSADGRLGNLSA*YRQRWQETWPL Trigger: CAGTGGCCAGGTTTCTTGCCACCTTTGTCTATAGCAGGCAGATAGGTTCCCCAGCCTACCGTCAGCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | GCATGCACCAAGGCAACATTCAAGGCTGCTTTAGCCTaGTCAGCCTCAGGTTGGTCCCAGGAGGTGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ACTKATFKAALA*SASGWSQEVEK Trigger: TTTCTCCACCTCCTGGGACCAACCTGAGGCTGAGCAGGCTAAAGCAGCCTTGAATGTTGCCTTGGTGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | TGCTACTGCTCCCTGCTGGATGTGTCTGGAGCAGCATaGACCAAGGCAACATTCAAGGCTGCTTTAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CYCSLLDVSGAA*TKATFKAALAC Trigger: GCAGGCTAAAGCAGCCTTGAATGTTGCCTTGGTGCATGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CAAAGCCAGGGATGTTACCAAGGTGCTACTGCTCCCTaGTGGATGTGTCTGGAGCAGCATGCACCAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSQGCYQGATAP*WMCLEQHAPRQ Trigger: TTGCCTTGGTGCATGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCACCTTGGTAACATCCCTGGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CTGGCAACAGGATCCACACAGCCTCGTGCACCTGGCTaGTTTATGCTGAGGAAGGCATCCAGTTTACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LATGSTQPRAPG*FMLRKASSLLS Trigger: GGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGTGCACGAGGCTGTGTGGATCCTGTTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | AGCCAGGGATGTTACCAAGGTGCTACTGCTCCCTGCTaGATGTGTCTGGAGCAGCATGCACCAAGGCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SQGCYQGATAPC*MCLEQHAPRQH Trigger: ATGTTGCCTTGGTGCATGCTGCTCCAGACACATCCAGCAGGGAGCAGTAGCACCTTGGTAACATCCCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | TGTGTCTTCCCACCTCTGCAGAGAAAAGGAACGGTGTaGAAAGGACCACACAGCTCCCTACTGCCGCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CVFPPLQRKGTV*KGPHSSLLPQC Trigger: ACACTGCGGCAGTAGGGAGCTGTGTGGTCCTTTCCACACCGTTCCTTTTCTCTGCAGAGGTGGGAAGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | CCTGCTATAGACAAAGGTGGCAAGAAACCTGGCCACTaGGTGGAGGAACTCAGAACAGGCCTCTGGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PAIDKGGKKPGH*VEELRTGLWEE Trigger: CTCTTCCCAGAGGCCTGTTCTGAGTTCCTCCACTCAGTGGCCAGGTTTCTTGCCACCTTTGTCTATAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | GGGAAGGGACTCAGATGCCAAGAGCACAGCAACCAGTaGCAAACAGCAAACAGAGAACACCCCACTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GKGLRCQEHSNQ*QTANREHPTLP Trigger: AGGAAGAGTGGGGTGTTCTCTGTTTGCTGTTTGGCACTGGTTGCTGTGCTCTTGGCATCTGAGTCCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | ACTAAAGATGCACCCAAGACATCCCTTCGAGTTAGCTaGCTGGCAACAGGATCCACACAGCCTCGTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: TKDAPKTSLRVS*LATGSTQPRAP Trigger: AGGTGCACGAGGCTGTGTGGATCCTGTTGCCAGGCAGCTAACTCGAAGGGATGTCTTGGGTGCATCTTTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | AGGCTGGGGAACCTATCTGCCTGCTATAGACAAAGGTaGCAAGAAACCTGGCCACTGAGTGGAGGAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLGNLSACYRQR*QETWPLSGGTQ Trigger: CTGAGTTCCTCCACTCAGTGGCCAGGTTTCTTGCCACCTTTGTCTATAGCAGGCAGATAGGTTCCCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | GAAAGGAGGGGCAGTGAGTGCAGATTAAACAGTCCATaGCAGGATGTGGGACTCAAGCTCTGCAGCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ERRGSECRLNSP*QDVGLKLCSKG Trigger: TCCCTTGCTGCAGAGCTTGAGTCCCACATCCTGCCATGGACTGTTTAATCTGCACTCACTGCCCCTCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | CATCAGGCCAGCAGAACTACTAAGGGGAAAGATCTCTaGCAGACCAGAAGGCAGGAACAGGACTGCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: HQASRTTKGKDL*QTRRQEQDCSM Trigger: CATGGAGCAGTCCTGTTCCTGCCTTCTGGTCTGTCAGAGATCTTTCCCCTTAGTAGTTCTGCTGGCCTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | ACAGGAGCCCACAGAACAGCCACAGCTTCAGTGCAGTaGCAAGTCAGGACCCAGGTCAGATCTTCTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: TGAHRTATASVQ*QVRTQVRSSGI Trigger: TATTCCAGAAGATCTGACCTGGGTCCTGACTTGTCACTGCACTGAAGCTGTGGCTGTTCTGTGGGCTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR GCA 72 bp | CCTCAAAGGGGTCACAACCCACAAGTTGAGAACCGCTaGCCTGAAAGTCTGTCAACAGGTGGTAAATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PQRGHNPQVENR*PESLSTGGKYR Trigger: CCTGTATTTACCACCTGTTGACAGACTTTCAGGGCAGCGGTTCTCAACTTGTGGGTTGTGACCCCTTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | TCCATGCCTTACCTTCTCCTCCTTATGACAGTAAGATaGAAAACTAGGCCTTCCCCGACCACTGTCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SMPYLLLLMTVR*KTRPSPTTVHL Trigger: GAGGTGGACAGTGGTCGGGGAAGGCCTAGTTTTCCATCTTACTGTCATAAGGAGGAGAAGGTAAGGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | GTTGATACTGAGGTCGGCTATGTTACCCCCAGTCCATaGCTTCTCGTTACTCCACTTGGTCAGTCCTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VDTEVGYVTPSP*LLVTPLGQSSS Trigger: TGATGAGGACTGACCAAGTGGAGTAACGAGAAGCCATGGACTGGGGGTAACATAGCCGACCTCAGTATCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR TCA 72 bp | AAGACAAAACCAAAACCAAACAGGCAAAGTGGTGAGTaGACGGAGAAGGCAAACAGGCGCTCACAGCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KTKPKPNRQSGE*TEKANRRSQQQ Trigger: TTGCTGCTGTGAGCGCCTGTTTGCCTTCTCCGTTCACTCACCACTTTGCCTGTTTGGTTTTGGTTTTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGATGTTTACCCTGTGCTTACTGTAACTTTGCTACTGTTATGAATCATGATCTGCTCAGCCTCAGGTaGGTCCCAGGAGGTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRCLPCAYCNFATVMNHDLLSLR*VPGGGE Trigger: TTCTCCACCTCCTGGGACCAACCTGAGGCTGAGCAG...ATCATGATTCATAACAGTAGCAAAGTTACAGTAAGCACAGGGTAAACATCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | CTGGAACTAGCATCTAAGCAGGAAGGTCAGAAAGTGTaGCAGAGCAAAAGGCAAAGTCCTCACCAATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LELASKQEGQKV*QSKRQSPHQSQ Trigger: TTGAGATTGGTGAGGACTTTGCCTTTTGCTCTGCCACACTTTCTGACCTTCCTGCTTAGATGCTAGTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CCA 72 bp | AATGGAAGGAACCCATTTAAAATGGAACAGAATCCCTaGCACCCCCATGTAGAGAACACACACACACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: NGRNPFKMEQNP*HPHVENTHTHS Trigger: TGAGTGTGTGTGTGTGTTCTCTACATGGGGGTGCCAGGGATTCTGTTCCATTTTAAATGGGTTCCTTCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CAA 72 bp | GTCCTGACCTTAGCAGAGAGGTTATGGGCAGCTGTTTaGGAGCTCAGGGCGCAGCCAGCACACACAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTLAERLWAAV*ELRAQPAHTGA Trigger: GGCTCCTGTGTGTGCTGGCTGCGCCCTGAGCTCCAAAACAGCTGCCCATAACCTCTCTGCTAAGGTCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CAA 72 bp | GTGGAAAGGACCACACAGCTCCCTACTGCCGCAGTGTaGCTCAAGGACAAAGGGCTGCGCCAGAGCTGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VERTTQLPTAAV*LKDKGLRQSCV Trigger: TACGCAGCTCTGGCGCAGCCCTTTGTCCTTGAGCAACACTGCGGCAGTAGGGAGCTGTGTGGTCCTTTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGAACGGTGTGGAAAGGACCACACAGCTCCCTACTGCCGCAGTGTTGGGCCCACCATCAGGATaGGCATCTCCTTCTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EKRNGVERTTQLPTAAVLGPPSG*ASPSCR Trigger: TCGGCAAGAAGGAGATGCGCATCCTGATGGTGGGCC...CAACACTGCGGCAGTAGGGAGCTGTGTGGTCCTTTCCACACCGTTCCTTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR GCA 90 bp | GGACAGCAGTTGGGGGCTGACCGTGTCAGTGTACAGGGAGGGAGGAGGGAGGAGCAAATCCTGTTTGTTTaGAAACACAAGGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQQLGADRVSVQGGRREEQILFV*KHKEHS Trigger: GCTGTGCTCCTTGTGTTTGCAAACAAACAGGATTTG...CTCCTCCCTCCTCCCTCCCTGTACACTGACACGGTCAGCCCCCAACTGCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR TCA 90 bp | ACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAGATGTATGTACCAATTGCGGTaGCGCAGGGAGTGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TWLLYAEEGIQFTVLSRCMYQLR*RRECSP Trigger: GGGGCTGCACTCCCTGCGTCACCGCAATTGGTACAT...ACATCTGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR GCA 90 bp | AGGTGGCAAGAAACCTGGCCACTGAGTGGAGGAACTCAGAACAGGCCTCTGGGATGCGCATCTCCTTCTTaGCGATTAGGCTCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWQETWPLSGGTQNRPLGCASPS*RLGSSE Trigger: TTCTGAAGAGCCTAATCGGCAAGAAGGAGATGCGCA...TCCCAGAGGCCTGTTCTGAGTTCCTCCACTCAGTGGCCAGGTTTCTTGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CAA 72 bp | CCAGTAAATTGGAATGATTCATCATCAGGACAGCAGTaGGGGGCTGACCGTGTCAGTGTACAGGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVNWNDSSSGQQ*GADRVSVQGGR Trigger: CCTCCCTCCCTGTACACTGACACGGTCAGCCCCCAACTGCTGTCCTGATGATGAATCATTCCAATTTACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGAACGGTGTGGAAAGGACCACACAGCTCCCTACTGCCGCAGTGTTGTTCTTGTTTTTGAGCTaGTTGGCCAGCCAGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKRNGVERTTQLPTAAVLFLFLS*LASQSK Trigger: CTTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAA...CAACACTGCGGCAGTAGGGAGCTGTGTGGTCCTTTCCACACCGTTCCTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR GCA 90 bp | ACCTGGCTGCTTTATGCTGAGGAAGGCATCCAGTTTACTGTCCTGTCCAGATGTCCTGAATGTACCAATTaGGGTGACGCAGGGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWLLYAEEGIQFTVLSRCPECTN*GDAGSA Trigger: TGCACTCCCTGCGTCACCGCAATTGGTACATTCAGG...ACATCTGGACAGGACAGTAAACTGGATGCCTTCCTCAGCATAAAGCAGCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR GCA 90 bp | CTGGAACTAGCATCTAAGCAGGAAGGTCAGAAAGTGTGGCAGAGCAAAAGGCAACTCGCTCCCGATCATTaGTGTCAACCACAAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LELASKQEGQKVWQSKRQLAPDH*CQPQIS Trigger: TGATATTTGTGGTTGACAGCAATGATCGGGAGCGAG...TTGCCTTTTGCTCTGCCACACTTTCTGACCTTCCTGCTTAGATGCTAGTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| 3UTR CAA 72 bp | CTGAAAGTCTGTCAACAGGTGGTAAATACAGGTAAATaGAGGACAGAGCTCTTTAGGAGTTGGTCAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LKVCQQVVNTGK*RTELFRSWSVI Trigger: TATGACTGACCAACTCCTAAAGAGCTCTGTCCTCAATTTACCTGTATTTACCACCTGTTGACAGACTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR CAA 90 bp | CCAGGAATGCCACCTGCAGAGAGGAAAACAACGGGACCCACCCACATCCCCTTAATGCGCATCTCCTTCTaGCCGATTAGGCTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGMPPAERKTTGPTHIPLMRISF*PIRLFR Trigger: TCTGAAGAGCCTAATCGGCAAGAAGGAGATGCGCAT...TAAGGGGATGTGGGTGGGTCCCGTTGTTTTCCTCTCTGCAGGTGGCATTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR CAA 90 bp | AAAGATGGATTAGGGAATGTAGAAAGCACCCCCACCTCCCCACAAAGCCAGGGAACTCGCTCCCGATCATaGCTGTCAACCACAAATATC | + |
|
Preference number: 5 (lower is better) Translates to: KDGLGNVESTPTSPQSQGTRSRS*LSTTNI Trigger: GATATTTGTGGTTGACAGCAATGATCGGGAGCGAGT...TCCCTGGCTTTGTGGGGAGGTGGGGGTGCTTTCTACATTCCCTAATCCATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGTTTACCCTGTGCTTACTGTAACTTTGCTACTGTTATGAATCATGATTTCGGCAAATCCTGTTaGTTTGCAAACACAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRCLPCAYCNFATVMNHDFGKSC*FANTRS Trigger: GCTCCTTGTGTTTGCAAACAAACAGGATTTGCCGAA...ATCATGATTCATAACAGTAGCAAAGTTACAGTAAGCACAGGGTAAACATCTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053183.12 |
||