Pregenerated sensors for ARF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062421Ensembl transcript IDs: ENSMUST00000057921.10, ENSMUST00000063347.12
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTaGGCCTTCCTATCACTACATCTGCAAGACAACACAGCACACACT | + |
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Preference number: 1 (lower is better) Translates to: RAVWPEGLGLKPAPL*AFLSLHLQDNTAHT Trigger: AGTGTGTGCTGTGTTGTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR CCA 90 bp | AGAGTCCTGCCTCCTGCTGGGCCAGCAGCCCACAGAGTTTCCATTTaGCACGTTTGGAGCAGGCTGGAAACTTCTCTAGTGTTACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RVLPPAGPAAHRVSI*HVWSRLETSLVLQS Trigger: AGACTGTAACACTAGAGAAGTTTCCAGCCTGCTCCAAACGTGCCAAATGGAAACTCTGTGGGCTGCTGGCCCAGCAGGAGGCAGGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR TCA 90 bp | AACACAGCACACACTTCCAAGCCACTCTTCAGATGCCGCTGCCATTaGGGAGGGAGCCTATGCCTCGAGAGCAGTCTAAGTGAAAGATGC | + |
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Preference number: 1 (lower is better) Translates to: NTAHTSKPLFRCRCH*GGSLCLESSLSERC Trigger: GCATCTTTCACTTAGACTGCTCTCGAGGCATAGGCTCCCTCCTCAATGGCAGCGGCATCTGAAGAGTGGCTTGGAAGTGTGTGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR CCA 90 bp | TCCTTTTATAAAAGGACACTGACGTCCAACAGAATTCTGGGTGTATaGAGAGGCCAGACCCAGGTTGGCAACAACAGGACCTGTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SFYKRTLTSNRILGV*RGQTQVGNNRTCLA Trigger: AGCCAGACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCTCTCCATACACCCAGAATTCTGTTGGACGTCAGTGTCCTTTTATAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR TCA 90 bp | ATGGAAAGAATGACAGATCCTTCCTTTCCTTTTATAAAAGGACACTaGCGTCCAACAGAATTCTGGGTGTATGGAGAGGCCAGACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: MERMTDPSFPFIKGH*RPTEFWVYGEARPR Trigger: CCTGGGTCTGGCCTCTCCATACACCCAGAATTCTGTTGGACGTCAGTGTCCTTTTATAAAAGGAAAGGAAGGATCTGTCATTCTTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR TCA 90 bp | GTAATAATGCATCTTTTCTTCTCGGGAGCTTTAAAGCACTACAAGTaGGCTGCTAGCTTTGGCACAATGGAAAGAATGACAGATCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: VIMHLFFSGALKHYK*AASFGTMERMTDPS Trigger: GGAAGGATCTGTCATTCTTTCCATTGTGCCAAAGCTAGCAGCTCACTTGTAGTGCTTTAAAGCTCCCGAGAAGAAAAGATGCATTATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCAGCCACACAGCCCCCTaGGCTCCTCACACGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: AQSCVARGLRAEASSSLGSHTAP*APHTLT Trigger: TGTGAGCGTGTGAGGAGCCCAGGGGGCTGTGTGGCT...GCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTCCACCGTGGACCATaGGGCTTAAGGGAAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: AQSCVARGLRAEASSSLGLHRGP*GLREES Trigger: GGACTCTTCCCTTAAGCCTCATGGTCCACGGTGGAG...GCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCACAGAGCAGAGAAGTaGGAGCAGCAGCCTCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: AQSCVARGLRAEASSSLGHRAEK*EQQPQG Trigger: CCCTTGAGGCTGCTGCTCCCACTTCTCTGCTCTGTG...GCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTCCTAGGCCAGACCCAGGTTaGCAACAACAGGACCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SCVARGLRAEASSSLGLPRPDPG*QQQDLS Trigger: AGACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCT...AGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTGAGTATCGGGGCCACTaGGAACATCATCTCCTACAT | + |
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Preference number: 2 (lower is better) Translates to: QSCVARGLRAEASSSLGLEYRGH*EHHLLH Trigger: ATGTAGGAGATGATGTTCCCAGTGGCCCCGATACTC...AAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | AGCCATGACGCCAGAACACAAGAGCTACCTCCCTTCACTTCCTCCAGCCAACCTCCTCACACGCTCACATaGACACGGGAAAGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SHDARTQELPPFTSSSQPPHTLT*TRERPA Trigger: AGCTGGCCTTTCCCGTGTGCATGTGAGCGTGTGAGG...AGGTTGGCTGGAGGAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR CAA 90 bp | AAGAGTCCTGCCTCCTGCTGGGCCAGCAGCCCACAGAGTTTCCATTaGGCACGTTTGGAGCAGGCTGGAAACTTCTCTAGTGTTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: KSPASCWASSPQSFH*ARLEQAGNFSSVTV Trigger: GACTGTAACACTAGAGAAGTTTCCAGCCTGCTCCAAACGTGCCAAATGGAAACTCTGTGGGCTGCTGGCCCAGCAGGAGGCAGGACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTAGGCCTCAGCAAAAATaGCCATCAAAGCTAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: QSCVARGLRAEASSSLGLRPQQK*PSKLVK Trigger: TTTCACTAGCTTTGATGGTCATTTTTGCTGAGGCCT...AAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | ACAACGGGACACAGTGACAACTCCACCCAGGACAACTGTCTGCTTCATGTGAACTTAAGGGAAGAGTCCTaGCTCCTGCTGGGCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TTGHSDNSTQDNCLLHVNLREES*LLLGQQ Trigger: CTGCTGGCCCAGCAGGAGGCAGGACTCTTCCCTTAA...GTTCACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCACTGTGTCCCGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | CAACAACAGGACCTGTCTGGCTCCTGCTTTCTTCTTTTCCAGGCTAGAGATTCTAGCCACACAGCCCCCTaGGCTCCTCACACGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: QQQDLSGSCFLLFQARDSSHTAP*APHTLT Trigger: TGTGAGCGTGTGAGGAGCCCAGGGGGCTGTGTGGCT...AGAATCTCTAGCCTGGAAAAGAAGAAAGCAGGAGCCAGACAGGTCCTGTTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | ACTCCACCGTGGACCATGAGGCTTAAGGGAAGAGTCCTGCCTCCTGCTGGGCCAACAACAGGACCTGTCTaGCTCCTGCTTTCTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TPPWTMRLKGRVLPPAGPTTGPV*LLLSSF Trigger: AAAAGAAGAAAGCAGGAGCCAGACAGGTCCTGTTGT...TGGCCCAGCAGGAGGCAGGACTCTTCCCTTAAGCCTCATGGTCCACGGTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | TTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACAAGGCCAGCTGGCTTTaGCACAATGCATGGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: LGLKPAPLWAFLSLHLQDKASWL*HNAWGM Trigger: CATTCCCCATGCATTGTGGCAAAGCCAGCTGGCCTT...GTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCTCCGACCTGTCTGGCTCCTaGTTTCTTCTTTTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QPSTRPGTLSIITKGKSSDLSGS*FLLFQA Trigger: AGCCTGGAAAAGAAGAAAGCAGGAGCCAGACAGGTC...GGAGCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACAACACAGCAAGGCCAGACCCAGGTTaGCAACAACAGGACCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KPAPLWAFLSLHLQDNTARPDPG*QQQDLS Trigger: AGACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCT...TGCTGTGTTGTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | TCGGAGCACAGTTTAGCACCATCTCAGGGAGTATCGGGGCCACTGGGAACATCAAGAATTCTGGGTGTATaGAGAGGCCAGACCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SEHSLAPSQGVSGPLGTSRILGV*RGQTQV Trigger: AACCTGGGTCTGGCCTCTCCATACACCCAGAATTCT...TGATGTTCCCAGTGGCCCCGATACTCCCTGAGATGGTGCTAAACTGTGCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | ACAACGGGACACAGTGACAACTCCACCCAGGACAACTGTCTGCTTCATGTGAACAAGGCCAGCTGGCTTTaGCACAATGCATGGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: TTGHSDNSTQDNCLLHVNKASWL*HNAWGM Trigger: CATTCCCCATGCATTGTGGCAAAGCCAGCTGGCCTT...GTTCACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCACTGTGTCCCGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | CATGACGCCAGAACACAAGAGCTACCTCCCTTCACTTCCTCCAGCCAACCTTCAGACCTGTCTGGCTCCTaGTTTCTTCTTTTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HDARTQELPPFTSSSQPSDLSGS*FLLFQA Trigger: AGCCTGGAAAAGAAGAAAGCAGGAGCCAGACAGGTC...TGAAGGTTGGCTGGAGGAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | CCGCAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCGAGCTAACAGAACTTTaGGGAAGTAGTCCCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PQPSTRPGTLSIITKGKSELTEL*GSSPSE Trigger: TTCAGAGGGACTACTTCCCCAAAGTTCTGTTAGCTC...GCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | CCGCAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCAGGCCTCAGCAAAAATaGCCATCAAAGCTAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PQPSTRPGTLSIITKGKSRPQQK*PSKLVK Trigger: TTTCACTAGCTTTGATGGTCATTTTTGCTGAGGCCT...GCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | GGAGCACAGTTTAGCACCATCTCAGGGAGTATCGGGGCCACTGGGAACATCATCTTAAAGCACTACAAGTaGGCTGCTAGCTTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: GAQFSTISGSIGATGNIILKHYK*AASFGT Trigger: TGTGCCAAAGCTAGCAGCTCACTTGTAGTGCTTTAA...GATGATGTTCCCAGTGGCCCCGATACTCCCTGAGATGGTGCTAAACTGTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTTCAAAGCTAGTGAAATaGAAGGTAGCATTCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QSCVARGLRAEASSSLGLSKLVK*KVAFKM Trigger: CATTTTGAATGCTACCTTCCATTTCACTAGCTTTGA...AAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACAACACAGCACGTCCAACAGAATTCTaGGTGTATGGAGAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KPAPLWAFLSLHLQDNTARPTEF*VYGEAR Trigger: TCTGGCCTCTCCATACACCCAGAATTCTGTTGGACG...TGCTGTGTTGTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGCATAATTACAAAGGGCAAGAGCTCCCAGCCAATGGGAGGTGTACAATTCTCCACCGTGGACCATaGGGCTTAAGGGAAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: TKHNYKGQELPANGRCTILHRGP*GLREES Trigger: GGACTCTTCCCTTAAGCCTCATGGTCCACGGTGGAG...AATTGTACACCTCCCATTGGCTGGGAGCTCTTGCCCTTTGTAATTATGCTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGCTATCACACCCAGGGAGGCCTCAGCAAAAATGACCATCAAAGCTAGTCTGGCTTTGCCACAATaGATGGGGAATGGGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SLAITPREASAKMTIKASLALPQ*MGNGLL Trigger: AAGCAACCCATTCCCCATGCATTGTGGCAAAGCCAG...ACTAGCTTTGATGGTCATTTTTGCTGAGGCCTCCCTGGGTGTGATAGCCAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | AGATTCTCTGGCTATCACACCCAGGGAGGCCTCAGCAAAAATGACCATCAAAGCCTGGCTTTGCCACAATaGATGGGGAATGGGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RFSGYHTQGGLSKNDHQSLALPQ*MGNGLL Trigger: AAGCAACCCATTCCCCATGCATTGTGGCAAAGCCAG...GCTTTGATGGTCATTTTTGCTGAGGCCTCCCTGGGTGTGATAGCCAGAGAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | ACTAAGCATAATTACAAAGGGCAAGAGCTCCCAGCCAATGGGAGGTGTACAATTTTAAGGGAAGAGTCCTaGCTCCTGCTGGGCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TKHNYKGQELPANGRCTILREES*LLLGQQ Trigger: CTGCTGGCCCAGCAGGAGGCAGGACTCTTCCCTTAA...AATTGTACACCTCCCATTGGCTGGGAGCTCTTGCCCTTTGTAATTATGCTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | ACATTAACCTCCCGACTTTCTCACAAACTCTCAGAACTCACGGTGCGCAGTTCTAGGCTAGAGATTCTCTaGCTATCACACCCAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TLTSRLSHKLSELTVRSSRLEIL*LSHPGR Trigger: CCTCCCTGGGTGTGATAGCCAGAGAATCTCTAGCCT...AGAACTGCGCACCGTGAGTTCTGAGAGTTTGTGAGAAAGTCGGGAGGTTAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | ACAACGGGACACAGTGACAACTCCACCCAGGACAACTGTCTGCTTCATGTGAACTTAAAGCACTACAAGTaGGCTGCTAGCTTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: TTGHSDNSTQDNCLLHVNLKHYK*AASFGT Trigger: TGTGCCAAAGCTAGCAGCTCACTTGTAGTGCTTTAA...GTTCACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCACTGTGTCCCGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | ACATTAACCTCCCGACTTTCTCACAAACTCTCAGAACTCACGGTGCGCAGTTCTAGAATTCTGGGTGTATaGAGAGGCCAGACCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TLTSRLSHKLSELTVRSSRILGV*RGQTQV Trigger: AACCTGGGTCTGGCCTCTCCATACACCCAGAATTCT...AGAACTGCGCACCGTGAGTTCTGAGAGTTTGTGAGAAAGTCGGGAGGTTAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | ACTAAGCATAATTACAAAGGGCAAGAGCTCCCAGCCAATGGGAGGTGTACAATTCGTCCAACAGAATTCTaGGTGTATGGAGAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TKHNYKGQELPANGRCTIRPTEF*VYGEAR Trigger: TCTGGCCTCTCCATACACCCAGAATTCTGTTGGACG...AATTGTACACCTCCCATTGGCTGGGAGCTCTTGCCCTTTGTAATTATGCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CCA 90 bp | CATGACGCCAGAACACAAGAGCTACCTCCCTTCACTTCCTCCAGCCAACCTTCATCAAAGCTAGTGAAATaGAAGGTAGCATTCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: HDARTQELPPFTSSSQPSSKLVK*KVAFKM Trigger: CATTTTGAATGCTACCTTCCATTTCACTAGCTTTGA...TGAAGGTTGGCTGGAGGAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR GCA 90 bp | ACTAAGCATAATTACAAAGGGCAAGAGCTCCCAGCCAATGGGAGGTGTACAATTTCCTATCACTACATCTaGAAGACAACACAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: TKHNYKGQELPANGRCTISYHYI*KTTQHT Trigger: TGTGTGCTGTGTTGTCTTGCAGATGTAGTGATAGGA...AATTGTACACCTCCCATTGGCTGGGAGCTCTTGCCCTTTGTAATTATGCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTCCCAGCCAATGGGAGGTGTACAATTTCAACATTTCTCAGGAATTCATAATGAAAAAGGTCACTaGTTCCTTGGGCTAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: KSSQPMGGVQFQHFSGIHNEKGH*FLGLKP Trigger: TGGTTTTAGCCCAAGGAATCAGTGACCTTTTTCATT...ATGAATTCCTGAGAAATGTTGAAATTGTACACCTCCCATTGGCTGGGAGCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR GCA 72 bp | AGCCACACAGCCCCCTGGGCTCCTCACACGCTCACATaGACACGGGAAAGGCCAGCTGGCTTTGCCACAATG | + |
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Preference number: 3 (lower is better) Translates to: SHTAPWAPHTLT*TRERPAGFATM Trigger: CATTGTGGCAAAGCCAGCTGGCCTTTCCCGTGTGCATGTGAGCGTGTGAGGAGCCCAGGGGGCTGTGTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR TCA 72 bp | ACTTCCTCCAGCCAACCTTCACTCCACCGTGGACCATaGGGCTTAAGGGAAGAGTCCTGCCTCCTGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TSSSQPSLHRGP*GLREESCLLLG Trigger: GCCCAGCAGGAGGCAGGACTCTTCCCTTAAGCCTCATGGTCCACGGTGGAGTGAAGGTTGGCTGGAGGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR-3UTR CAA 90 bp | CCGCAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCGAGGCCAGACCCAGGTaGGCAACAACAGGACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: PQPSTRPGTLSIITKGKSEARPR*ATTGPV Trigger: GACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCTC...GCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR TCA 72 bp | GAGAAGTGGGAGCAGCAGCCTCAAGGGCCTGAGCCATaGCGCCAGAACACAAGAGCTACCTCCCTTCACTTC | + |
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Preference number: 3 (lower is better) Translates to: EKWEQQPQGPEP*RQNTRATSLHF Trigger: GAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATGGCTCAGGCCCTTGAGGCTGCTGCTCCCACTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
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| 3UTR CCA 72 bp | TCCTCACACGCTCACATGCACACGGGAAAGGCCAGCTaGCTTTGCCACAATGCATGGGGAATGGGTTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSHAHMHTGKAS*LCHNAWGMGCF Trigger: GAAGCAACCCATTCCCCATGCATTGTGGCAAAGCCAGCTGGCCTTTCCCGTGTGCATGTGAGCGTGTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CCA 72 bp | CCTCCTGCTGGGCCAGCAGCCCACAGAGTTTCCATTTaGCACGTTTGGAGCAGGCTGGAAACTTCTCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPAGPAAHRVSI*HVWSRLETSLV Trigger: CACTAGAGAAGTTTCCAGCCTGCTCCAAACGTGCCAAATGGAAACTCTGTGGGCTGCTGGCCCAGCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR TCA 72 bp | CACACTTCCAAGCCACTCTTCAGATGCCGCTGCCATTaGGGAGGGAGCCTATGCCTCGAGAGCAGTCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTSKPLFRCRCH*GGSLCLESSLS Trigger: ACTTAGACTGCTCTCGAGGCATAGGCTCCCTCCTCAATGGCAGCGGCATCTGAAGAGTGGCTTGGAAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CCA 72 bp | TGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTaGGCCTTCCTATCACTACATCTGCAAGACAACACA | + |
|
Preference number: 3 (lower is better) Translates to: WPEGLGLKPAPL*AFLSLHLQDNT Trigger: TGTGTTGTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CCA 72 bp | CAGAATTCTGGGTGTATGGAGAGGCCAGACCCAGGTTaGCAACAACAGGACCTGTCTGGCTCCTGCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QNSGCMERPDPG*QQQDLSGSCFL Trigger: AAGAAAGCAGGAGCCAGACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCTCTCCATACACCCAGAATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR TCA 72 bp | GTGACAACTCCACCCAGGACAACTGTCTGCTTCATGTaGACAACACTCAGCACAGAGCAGAGAAGTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VTTPPRTTVCFM*TTLSTEQRSGS Trigger: GCTCCCACTTCTCTGCTCTGTGCTGAGTGTTGTTCACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR GCA 72 bp | AGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTaGAAGACAACACAGCACACACTTCCAAGCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SQLLSGPSYHYI*KTTQHTLPSHS Trigger: AGAGTGGCTTGGAAGTGTGTGCTGTGTTGTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CCA 72 bp | AAAAGGACACTGACGTCCAACAGAATTCTGGGTGTATaGAGAGGCCAGACCCAGGTTGGCAACAACAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: KRTLTSNRILGV*RGQTQVGNNRT Trigger: GGTCCTGTTGTTGCCAACCTGGGTCTGGCCTCTCCATACACCCAGAATTCTGTTGGACGTCAGTGTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAGCATAATTACAAAGGGCAAGAGCTCCCAGCCAATGGGAGGTGTACAATTGAGGCCAGACCCAGGTaGGCAACAACAGGACCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TKHNYKGQELPANGRCTIEARPR*ATTGPV Trigger: GACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCTC...AATTGTACACCTCCCATTGGCTGGGAGCTCTTGCCCTTTGTAATTATGCTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR TCA 72 bp | CAAATGCCTACAGTAGACTGGGACAACGGGACACAGTaGCAACTCCACCCAGGACAACTGTCTGCTTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QMPTVDWDNGTQ*QLHPGQLSASC Trigger: ACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCACTGTGTCCCGTTGTCCCAGTCTACTGTAGGCATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR TCA 72 bp | TTGAGGAGGGAGCCTATGCCTCGAGAGCAGTCTAAGTaGAAGATGCTTCTCGGAGCACAGTTTAGCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: LRREPMPREQSK*KMLLGAQFSTI Trigger: GATGGTGCTAAACTGTGCTCCGAGAAGCATCTTTCACTTAGACTGCTCTCGAGGCATAGGCTCCCTCCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR GCA 72 bp | CCTCCCGACTTTCTCACAAACTCTCAGAACTCACGGTaGGCAGTTCTGGAAACAGATACTAACCAAATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPDFLTNSQNSR*AVLETDTNQMP Trigger: AGGCATTTGGTTAGTATCTGTTTCCAGAACTGCGCACCGTGAGTTCTGAGAGTTTGTGAGAAAGTCGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR TCA 72 bp | ATGACAGATCCTTCCTTTCCTTTTATAAAAGGACACTaGCGTCCAACAGAATTCTGGGTGTATGGAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MTDPSFPFIKGH*RPTEFWVYGEA Trigger: GGCCTCTCCATACACCCAGAATTCTGTTGGACGTCAGTGTCCTTTTATAAAAGGAAAGGAAGGATCTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR TCA 72 bp | CATCTTTTCTTCTCGGGAGCTTTAAAGCACTACAAGTaGGCTGCTAGCTTTGGCACAATGGAAAGAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: HLFFSGALKHYK*AASFGTMERMT Trigger: TGTCATTCTTTCCATTGTGCCAAAGCTAGCAGCTCACTTGTAGTGCTTTAAAGCTCCCGAGAAGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CAA 72 bp | GCCTCCTGCTGGGCCAGCAGCCCACAGAGTTTCCATTaGGCACGTTTGGAGCAGGCTGGAAACTTCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASCWASSPQSFH*ARLEQAGNFSS Trigger: ACTAGAGAAGTTTCCAGCCTGCTCCAAACGTGCCAAATGGAAACTCTGTGGGCTGCTGGCCCAGCAGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR TCA 90 bp | ACAACGGGACACAGTGACAACTCCACCCAGGACAACTGTCTGCTTCATGTGAACCTTCCCGGGCCTCATTaGCCCGCTCTCGGTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: TTGHSDNSTQDNCLLHVNLPGPH*PALGHY Trigger: GTAATGACCGAGAGCGGGTCAATGAGGCCCGGGAAG...GTTCACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCACTGTGTCCCGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CAA 72 bp | ACACACTTCCAAGCCACTCTTCAGATGCCGCTGCCATaGAGGAGGGAGCCTATGCCTCGAGAGCAGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: THFQATLQMPLP*RREPMPREQSK Trigger: CTTAGACTGCTCTCGAGGCATAGGCTCCCTCCTCAATGGCAGCGGCATCTGAAGAGTGGCTTGGAAGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTAAACACCAACAAGACTaGATCTCTGAGCTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSCVARGLRAEASSSLGLKHQQD*ISELIF Trigger: GAAGATGAGCTCAGAGATGCAGTCTTGTTGGTGTTT...AAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTCCTCTTGTCTGTGATCTCTaGTGCATTCATAGCATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCVARGLRAEASSSLGLPLVCDL*CIHSIR Trigger: CCTAATGCTATGAATGCAGCAGAGATCACAGACAAG...AGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CAA 72 bp | ACAGAATTCTGGGTGTATGGAGAGGCCAGACCCAGGTaGGCAACAACAGGACCTGTCTGGCTCCTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEFWVYGEARPR*ATTGPVWLLLS Trigger: AGAAAGCAGGAGCCAGACAGGTCCTGTTGTTGCCAACCTGGGTCTGGCCTCTCCATACACCCAGAATTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR TCA 90 bp | TCGGAGCACAGTTTAGCACCATCTCAGGGAGTATCGGGGCCACTGGGAACATCAACAAGACTGCATCTCTaGGCTCATCTTCTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEHSLAPSQGVSGPLGTSTRLHL*AHLLLA Trigger: TGCTAGCAGAAGATGAGCTCAGAGATGCAGTCTTGT...TGATGTTCCCAGTGGCCCCGATACTCCCTGAGATGGTGCTAAACTGTGCTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CCA 90 bp | AGCCATGACGCCAGAACACAAGAGCTACCTCCCTTCACTTCCTCCAGCCAACCTGGTCTAATTTTGTCCTaGCCACCAACATCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SHDARTQELPPFTSSSQPGLILS*PPTSQT Trigger: AGTCTGGGATGTTGGTGGCCAGGACAAAATTAGACC...AGGTTGGCTGGAGGAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR GCA 90 bp | CCGCAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCGTCTGTGATCTCTGCTaGATTCATAGCATTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSTRPGTLSIITKGKSVCDLC*IHSIRK Trigger: CTTCCTAATGCTATGAATGCAGCAGAGATCACAGAC...GCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGCTCCCAGCCAATGGGAGGTGTACAATTTCAACATTTCTCAGGAATTCATCTTCCCGGGCCTCATTaGCCCGCTCTCGGTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: KSSQPMGGVQFQHFSGIHLPGPH*PALGHY Trigger: GTAATGACCGAGAGCGGGTCAATGAGGCCCGGGAAG...ATGAATTCCTGAGAAATGTTGAAATTGTACACCTCCCATTGGCTGGGAGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR TCA 90 bp | ACAACGGGACACAGTGACAACTCCACCCAGGACAACTGTCTGCTTCATGTGAACACAAGACTGCATCTCTaGGCTCATCTTCTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTGHSDNSTQDNCLLHVNTRLHL*AHLLLA Trigger: TGCTAGCAGAAGATGAGCTCAGAGATGCAGTCTTGT...GTTCACATGAAGCAGACAGTTGTCCTGGGTGGAGTTGTCACTGTGTCCCGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR GCA 90 bp | TTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACGTCTGTGATCTCTGCTaGATTCATAGCATTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKPAPLWAFLSLHLQDVCDLC*IHSIRK Trigger: CTTCCTAATGCTATGAATGCAGCAGAGATCACAGAC...GTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACAACACAGCAAAACACCAACAAGACTaGATCTCTGAGCTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPAPLWAFLSLHLQDNTAKHQQD*ISELIF Trigger: GAAGATGAGCTCAGAGATGCAGTCTTGTTGGTGTTT...TGCTGTGTTGTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGCTCCCAGCCAATGGGAGGTGTACAATTTCAACATTTCTCAGGAATTCATGGTCTAATTTTGTCCTaGCCACCAACATCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSSQPMGGVQFQHFSGIHGLILS*PPTSQT Trigger: AGTCTGGGATGTTGGTGGCCAGGACAAAATTAGACC...ATGAATTCCTGAGAAATGTTGAAATTGTACACCTCCCATTGGCTGGGAGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CAA 72 bp | TTGTTACCAATGAACAAGATTTATTTGAAGTTCAGCTaGTGTTCCCCCTCCTGTAGCAGCAGGGATCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPMNKIYLKFS*CSPSCSSRDQF Trigger: AAATTGATCCCTGCTGCTACAGGAGGGGGAACACAAGCTGAACTTCAAATAAATCTTGTTCATTGGTAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| 3UTR CAA 72 bp | CCTAGTATAACTTTGTTACCAATGAACAAGATTTATTaGAAGTTCAGCTTGTGTTCCCCCTCCTGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSITLLPMNKIY*KFSLCSPSCSS Trigger: GCTGCTACAGGAGGGGGAACACAAGCTGAACTTCAAATAAATCTTGTTCATTGGTAACAAAGTTATACTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCTCTTCCCGGGCCTCATaGACCCGCTCTCGGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: AQSCVARGLRAEASSSLGSSRAS*TRSRSL Trigger: TAATGACCGAGAGCGGGTCAATGAGGCCCGGGAAGA...GCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGCTGTGTGGCCAGAGGGCTTAGGGCTGAAGCCAGCTCCTCTCTGGGCTCTACTGTCTCCACATaGAAACCTATGGTAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AQSCVARGLRAEASSSLGSTVST*KPMVGM Trigger: CATCCCTACCATAGGTTTCAATGTGGAGACAGTAGA...GCCCAGAGAGGAGCTGGCTTCAGCCCTAAGCCCTCTGGCCACACAGCTCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | TTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACTCTTCCCGGGCCTCATaGACCCGCTCTCGGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: LGLKPAPLWAFLSLHLQDSSRAS*TRSRSL Trigger: TAATGACCGAGAGCGGGTCAATGAGGCCCGGGAAGA...GTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | TCGGAGCACAGTTTAGCACCATCTCAGGGAGTATCGGGGCCACTGGGAACATCATGGTTTTTGAGCTGGTaGGAGAGCCAGTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SEHSLAPSQGVSGPLGTSWFLSW*ESQSRP Trigger: AGGCCTGGACTGGCTCTCCAACCAGCTCAAAAACCA...TGATGTTCCCAGTGGCCCCGATACTCCCTGAGATGGTGCTAAACTGTGCTCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | CCGCAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCCACAAAGGTCTAATTTaGTCCTGGCCACCAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: PQPSTRPGTLSIITKGKSHKGLI*SWPPTS Trigger: GGATGTTGGTGGCCAGGACAAAATTAGACCTTTGTG...GCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | TTAGGGCTGAAGCCAGCTCCTCTCTGGGCCTTCCTATCACTACATCTGCAAGACTACAAGATCGTCGTTTaGCCAGCTGCATCTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLKPAPLWAFLSLHLQDYKIVV*PAASKP Trigger: GGGCTTAGATGCAGCTGGCAAAACGACGATCTTGTA...GTCTTGCAGATGTAGTGATAGGAAGGCCCAGAGAGGAGCTGGCTTCAGCCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | CATGACGCCAGAACACAAGAGCTACCTCCCTTCACTTCCTCCAGCCAACCTTCATACAAGATCGTCGTTTaGCCAGCTGCATCTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HDARTQELPPFTSSSQPSYKIVV*PAASKP Trigger: GGGCTTAGATGCAGCTGGCAAAACGACGATCTTGTA...TGAAGGTTGGCTGGAGGAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | CATGACGCCAGAACACAAGAGCTACCTCCCTTCACTTCCTCCAGCCAACCTTCAGAGTGTAAGCCAAGCTaGTCTGTGATCTCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HDARTQELPPFTSSSQPSECKPS*SVISAA Trigger: TGCAGCAGAGATCACAGACAAGCTTGGCTTACACTC...TGAAGGTTGGCTGGAGGAAGTGAAGGGAGGTAGCTCTTGTGTTCTGGCGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | ACACCCAGGGAGGCCTCAGCAAAAATGACCATCAAAGCTAGTGAAATGGAAGGTTGGTTTTTGAGCTGGTaGGAGAGCCAGTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPREASAKMTIKASEMEGWFLSW*ESQSRP Trigger: AGGCCTGGACTGGCTCTCCAACCAGCTCAAAAACCA...ACCTTCCATTTCACTAGCTTTGATGGTCATTTTTGCTGAGGCCTCCCTGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | CCGCAGCCCAGCACCAGGCCAGGCACACTAAGCATAATTACAAAGGGCAAGAGCTTAGGAAGATCCTGTTaGTTTACAAACACCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQPSTRPGTLSIITKGKSLGRSC*FTNTNK Trigger: CTTGTTGGTGTTTGTAAACAAACAGGATCTTCCTAA...GCTCTTGCCCTTTGTAATTATGCTTAGTGTGCCTGGCCTGGTGCTGGGCTGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | CAACAACAGGACCTGTCTGGCTCCTGCTTTCTTCTTTTCCAGGCTAGAGATTCTGAGTGTAAGCCAAGCTaGTCTGTGATCTCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QQQDLSGSCFLLFQARDSECKPS*SVISAA Trigger: TGCAGCAGAGATCACAGACAAGCTTGGCTTACACTC...AGAATCTCTAGCCTGGAAAAGAAGAAAGCAGGAGCCAGACAGGTCCTGTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | ACATTAACCTCCCGACTTTCTCACAAACTCTCAGAACTCACGGTGCGCAGTTCTTCTACTGTCTCCACATaGAAACCTATGGTAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLTSRLSHKLSELTVRSSSTVST*KPMVGM Trigger: CATCCCTACCATAGGTTTCAATGTGGAGACAGTAGA...AGAACTGCGCACCGTGAGTTCTGAGAGTTTGTGAGAAAGTCGGGAGGTTAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS-3UTR CAA 90 bp | ACATTAACCTCCCGACTTTCTCACAAACTCTCAGAACTCACGGTGCGCAGTTCTTTAGGAAGATCCTGTTaGTTTACAAACACCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLTSRLSHKLSELTVRSSLGRSC*FTNTNK Trigger: CTTGTTGGTGTTTGTAAACAAACAGGATCTTCCTAA...AGAACTGCGCACCGTGAGTTCTGAGAGTTTGTGAGAAAGTCGGGAGGTTAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||
| CDS TCA 72 bp | AGATCGTCGTTTTGCCAGCTGCATCTAAGCCCACCATaGGAATCCGCATTTCCTTTTTCCCAAATAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSFCQLHLSPP*ESAFPFSQIGF Trigger: AAAGCCTATTTGGGAAAAAGGAAATGCGGATTCTCATGGTGGGCTTAGATGCAGCTGGCAAAACGACGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057921.10 ENSMUST00000063347.12 |
||