Pregenerated sensors for ARCN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032096Ensembl transcript IDs: ENSMUST00000034607.10
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAAAGCATCTGGGAAGGGAGGAGGTGGACACGCGGAATCTGAGTaGACTACGTGCTTCAACTCAATCGCCCCACAGCACGGAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: GKASGKGGGGHAESE*TTCFNSIAPQHGEN Trigger: GTTCTCTCCGTGCTGTGGGGCGATTGAGTTGAAGCACGTAGTCCACTCAGATTCCGCGTGTCCACCTCCTCCCTTCCCAGATGCTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR TCA 90 bp | GTCATCTACTGTTTCCCATTGCTACTGCTTGCAGCCTTCAGCAACTaGTCGTCCATCCCGCCCAGTTCAGTGCTTGGCGGGTGGGATTGG | + |
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Preference number: 1 (lower is better) Translates to: VIYCFPLLLLAAFSN*SSIPPSSVLGGWDW Trigger: CCAATCCCACCCGCCAAGCACTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 90 bp | GCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATaGATAGTATACTCTTGCCAGGGAAGGCAGGTGTTCAGAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ASHPSHSLLWDCPAS*IVYSCQGRQVFRGR Trigger: TCTCCCTCTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 90 bp | AGGGAAGGCAGGTGTTCAGAGGGAGATCTCTGCTCTGCTCTGCTCTaGAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGC | + |
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Preference number: 1 (lower is better) Translates to: REGRCSEGDLCSALL*SHLREWRSSTVSHC Trigger: GCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCCTCTGAACACCTGCCTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 90 bp | AGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTaGTTGCAGCCTTCAGCAACTGATCGTCCATCCCGCCCAGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SHLREWRSSTVSHCY*LQPSATDRPSRPVQ Trigger: CTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 90 bp | TTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTaGTTCATGGATAGTATACTCTTGCCAGGGAAGGCAGGTGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: FFGKPSQPQSSVGLP*FMDSILLPGKAGVQ Trigger: CTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 90 bp | GAAATTTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTaGCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: EISLASHPSHSLLWD*PASWIVYSCQGRQV Trigger: CACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAAATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 90 bp | GAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: ESDLITDGCEPPCGC*DLNFGPSEDPLSHL Trigger: GAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 90 bp | AGGCTAGAAATTTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTaGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: RLEISLASHPSHSLL*DCPASWIVYSCQGR Trigger: CCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAAATTTCTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR TCA 90 bp | GTGTCATTTGTCAAAAATGTCTCTGTGACACCGCAACACTGGGTGTaGGTTGAGGGTCCTTGCGCGCAGAGAACGTGCACTGTATCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VSFVKNVSVTPQHWV*VEGPCAQRTCTVSE Trigger: TTCTGATACAGTGCACGTTCTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGGTGTCACAGAGACATTTTTGACAAATGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 90 bp | AAGGCAGAAGAGCTATTTACTGGGGCATTCCATTCCCTGGAGAGCTaGCTTCCTGCTGGCCAAAGAAATCAGCAGCCTTTCCCTTTATGT | + |
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Preference number: 1 (lower is better) Translates to: KAEELFTGAFHSLES*LPAGQRNQQPFPLC Trigger: ACATAAAGGGAAAGGCTGCTGATTTCTTTGGCCAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTCTTCTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 90 bp | CTGGCTACCTTTAATATTGACACAAATGGGATTCACAACACTGCCTaGAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATAAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LATFNIDTNGIHNTA*NWKGRAHKDDFIKR Trigger: TCTCTTTATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATCCCATTTGTGTCAATATTAAAGGTAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 90 bp | ACCTTTAATATTGACACAAATGGGATTCACAACACTGCCTGCAACTaGAAGGGCAGGGCTCACAAGGACGACTTCATAAAGAGATGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TFNIDTNGIHNTACN*KGRAHKDDFIKRWS Trigger: GCTCCATCTCTTTATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATCCCATTTGTGTCAATATTAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGACACTGGGTGTGAGTTaGGGGTCCTTGCGCGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SLASHPSHSLLWDCPASWTLGVS*GSLRAE Trigger: CTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGT...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR TCA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATCCGCAACACTGGGTGTaGGTTGAGGGTCCTTGCGCG | + |
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Preference number: 2 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHPQHWV*VEGPCA Trigger: CGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGG...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCGCCCAGTTCAGTGCTTaGCGGGTGGGATTGGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LNFGPSEDPLSHLTSPISAQFSA*RVGLAD Trigger: ATCAGCCAATCCCACCCGCCAAGCACTGAACTGGGC...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGGCATTCCATTCCCTaGAGAGCTGGCTTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TLQKRESDLITDGCEPPCGHSIP*RAGFLL Trigger: CAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCC...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CAA 90 bp | CACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTaGCAGCCTTCAGCAACTGATCGTCCATCCCGCCCAGTTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HLREWRSSTVSHCYC*QPSATDRPSRPVQC Trigger: GCACTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CAA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGCWD*NFGPSEDPLSHLTS Trigger: GCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGTGCTCTGCTCTGCTCTaGAGCCACCTGAGAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: QSSVGLPCFMDSILLPGKCSALL*SHLREW Trigger: CCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCA...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGATTCACAACACTGCCTaGAACTGGAAGGGCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QSSVGLPCFMDSILLPGKIHNTA*NWKGRA Trigger: AGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAAT...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR GCA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGGAGATCTCTGCTCTaGTCTGCTCTGCAGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGCWDLNFGRSLL*SALQPP Trigger: AGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCC...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATAACACTGCCTGCAACTaGAAGGGCAGGGCTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: HCSCLQTLQKRESDLITDNTACN*KGRAHK Trigger: CTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTT...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR GCA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATTGCGCGCAGAGAACGTaGACTGTATCAGAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HCSCLQTLQKRESDLITDCAQRT*TVSEKG Trigger: CCCCTTTTCTGATACAGTGCACGTTCTCTGCGCGCA...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTCCCATTGCTACTGCTTaGAGCCTTCAGCAACTGATC | + |
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Preference number: 2 (lower is better) Translates to: TLQKRESDLITDGCEPPCPIATA*SLQQLI Trigger: GATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGG...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGTTGGGGGACCTCCAATaGCTTGTAAATTTGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SLASHPSHSLLWDCPASWLGDLQ*LVNLEN Trigger: GTTTTCCAAATTTACAAGCCATTGGAGGTCCCCCAA...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGTTTCCCATTGCTACTaGTTGCAGCCTTCAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: TLQKRESDLITDGCEPPCVSHCY*LQPSAT Trigger: AGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAAC...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAGAGCTGGCTTCCTGCTaGCCAAAGAAATCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FSSTLLHDRLPIPVPFLRELASC*PKKSAA Trigger: GGCTGCTGATTTCTTTGGCCAGCAGGAAGCCAGCTC...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CAA 90 bp | CAACTGATCGTCCATCCCGCCCAGTTCAGTGCTTGGCGGGTGGGATaGGCTGATTCAGCCTCTATTGAAAAGGTAATAGATCAAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: QLIVHPAQFSAWRVG*ADSASIEKVIDQNE Trigger: CTCATTTTGATCTATTACCTTTTCAATAGAGGCTGAATCAGCCAATCCCACCCGCCAAGCACTGAACTGGGCGGGATGGACGATCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTGAAAGCAAAGGGGTGTaGAAGACTCAAATCCATAGA | + |
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Preference number: 2 (lower is better) Translates to: SLLCSALQPPERMEVIYCESKGV*KTQIHR Trigger: TCTATGGATTTGAGTCTTTCACACCCCTTTGCTTTC...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGATCAAAAATGTCTCTGTaGCACCGCAACACTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: FSSTLLHDRLPIPVPFLRSKMSL*HRNTGC Trigger: ACACCCAGTGTTGCGGTGTCACAGAGACATTTTTGA...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR TCA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGATGACCCCAGTGTGTaGCTAAGTGTACTGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGCWDLNFDDPSV*LSVLKE Trigger: TTCTTTCAGTACACTTAGTCACACACTGGGGTCATC...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACTCAAAATGCTACCACTaGAATGGTAAAGATGGATCT | + |
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Preference number: 2 (lower is better) Translates to: WLLGFELRTFGRPTEPSHSKCYH*NGKDGS Trigger: AGATCCATCTTTACCATTTCAGTGGTAGCATTTTGA...GTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATAGATGGAGCAATGGATaGATACAGGAGAGAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: HCSCLQTLQKRESDLITDRWSNG*IQERKQ Trigger: TTGTTTTCTCTCCTGTATCCATCCATTGCTCCATCT...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAAGCTGCTTCCCAGCTaGCTACCTTTAATATTGACA | + |
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Preference number: 2 (lower is better) Translates to: DLITDGCEPPCGCWDLNFKLLPS*LPLILT Trigger: TGTCAATATTAAAGGTAGCCAGCTGGGAAGCAGCTT...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAAGAGATGGAGCAATaGATGGATACAGGAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: FSSTLLHDRLPIPVPFLRKEMEQ*MDTGEK Trigger: TTTCTCTCCTGTATCCATCCATTGCTCCATCTCTTT...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 72 bp | CAGGGAAGGCAGGTGTTCAGAGGGAGATCTCTGCTCTaGTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QGRQVFRGRSLL*SALQPPERMEV Trigger: GACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCCTCTGAACACCTGCCTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR TCA 72 bp | AGCATCTGGGAAGGGAGGAGGTGGACACGCGGAATCTaGGTGGACTACGTGCTTCAACTCAATCGCCCCACA | + |
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Preference number: 3 (lower is better) Translates to: SIWEGRRWTRGI*VDYVLQLNRPT Trigger: TGTGGGGCGATTGAGTTGAAGCACGTAGTCCACTCAGATTCCGCGTGTCCACCTCCTCCCTTCCCAGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR TCA 72 bp | TGTTTCCCATTGCTACTGCTTGCAGCCTTCAGCAACTaGTCGTCCATCCCGCCCAGTTCAGTGCTTGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: CFPLLLLAAFSN*SSIPPSSVLGG Trigger: CCCGCCAAGCACTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 72 bp | CCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATaGATAGTATACTCTTGCCAGGGAAGGCAGGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PSHSLLWDCPAS*IVYSCQGRQVF Trigger: GAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR TCA 72 bp | AAATGTCTCTGTGACACCGCAACACTGGGTGTGAGTTaGGGGTCCTTGCGCGCAGAGAACGTGCACTGTATC | + |
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Preference number: 3 (lower is better) Translates to: KCLCDTATLGVS*GSLRAENVHCI Trigger: GATACAGTGCACGTTCTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGGTGTCACAGAGACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR TCA 72 bp | GTCAAAAATGTCTCTGTGACACCGCAACACTGGGTGTaGGTTGAGGGTCCTTGCGCGCAGAGAACGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: VKNVSVTPQHWV*VEGPCAQRTCT Trigger: AGTGCACGTTCTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGGTGTCACAGAGACATTTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 72 bp | CTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTaGCAGGGAAGGCAGGTGTTCAGAGGGAGATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LWDCPASWIVYS*QGRQVFRGRSL Trigger: CAGAGATCTCCCTCTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 72 bp | AAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTaGTTCATGGATAGTATACTCTTGCCAGGGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KPSQPQSSVGLP*FMDSILLPGKA Trigger: TGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 72 bp | TTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTaGCCTGCTTCATGGATAGTATACTCTTGCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LASHPSHSLLWD*PASWIVYSCQG Trigger: TCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 72 bp | AATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTaGAGCCTTCAGCAACTGATCGTCCATCCCGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NGGHLLFPIATA*SLQQLIVHPAQ Trigger: CTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR GCA 72 bp | AGGTGTTCAGAGGGAGATCTCTGCTCTGCTCTGCTCTaGAGCCACCTGAGAGAATGGAGGTCATCTACTGTT | + |
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Preference number: 3 (lower is better) Translates to: RCSEGDLCSALL*SHLREWRSSTV Trigger: AACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCCTCTGAACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| 3UTR CCA 72 bp | GAGCTATTTACTGGGGCATTCCATTCCCTGGAGAGCTaGCTTCCTGCTGGCCAAAGAAATCAGCAGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELFTGAFHSLES*LPAGQRNQQPF Trigger: GAAAGGCTGCTGATTTCTTTGGCCAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR CCA 72 bp | AGGCAGAAGAGCTATTTACTGGGGCATTCCATTCCCTaGAGAGCTGGCTTCCTGCTGGCCAAAGAAATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RQKSYLLGHSIP*RAGFLLAKEIS Trigger: GCTGATTTCTTTGGCCAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTCTTCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR CCA 72 bp | CTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGACCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNFGPSEDPL Trigger: CAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGGCTTGGCGGGTGGGATaGGCTGATTCAGCCTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: CSHLREWRSSTVSHCYCLAWRVG*ADSASI Trigger: AATAGAGGCTGAATCAGCCAATCCCACCCGCCAAGC...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR GCA 72 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTCGGACCTTCGGAAGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WDLNFGPSEDP Trigger: TGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR CCA 72 bp | ATTTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTaGGACTGCCCTGCTTCATGGATAGTATACTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ISLASHPSHSLL*DCPASWIVYSC Trigger: GCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAGGCTAGAAATTTCTTaGGCAAGCCATCCCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DLITDGCEPPCGCWDLNFRLEIS*ASHPSH Trigger: GTGGCTGGGATGGCTTGCCAAAGAAATTTCTAGCCT...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCCCTCTGCTTTCGGGATaGAGTGTGTGTACTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: TCKYTVAVFRPSRRGSQIPLLSG*SVCTQT Trigger: TGTTTGAGTACACACACTCAATCCCGAAAGCAGAGG...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR TCA 72 bp | GCATCCCCCATCCCTATTCATTTACTCATCACTGTCTaGCAAAGGGCAGGCTTCAGGATACTGCAGAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASPIPIHLLITV*QRAGFRILQND Trigger: ATCATTCTGCAGTATCCTGAAGCCTGCCCTTTGTCAGACAGTGATGAGTAAATGAATAGGGATGGGGGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR GCA 72 bp | TTTAATATTGACACAAATGGGATTCACAACACTGCCTaGAACTGGAAGGGCAGGGCTCACAAGGACGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: FNIDTNGIHNTA*NWKGRAHKDDF Trigger: GAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATCCCATTTGTGTCAATATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGTGGCTACCTTTAATATaGACACAAATGGGATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: CSHLREWRSSTVSHCYCLWLPLI*TQMGFT Trigger: TGTGAATCCCATTTGTGTCAATATTAAAGGTAGCCA...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGATTAGATGGGGTATATTaGAGTAACCCCTCACTATAC | + |
|
Preference number: 3 (lower is better) Translates to: FSSTLLHDRLPIPVPFLRLDGVY*SNPSLY Trigger: GTATAGTGAGGGGTTACTCAAATATACCCCATCTAA...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR TCA 72 bp | TGTTCTCAGAGTGCTGAACACAGTACAACAGACAGATaGCCCCAGTGTGTGACTAAGTGTACTGAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CSQSAEHSTTDR*PQCVTKCTERK Trigger: TTTTCTTTCAGTACACTTAGTCACACACTGGGGTCATCTGTCTGTTGTACTGTGTTCAGCACTCTGAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR TCA 72 bp | AAGCCTAATTCTACCAAAAACCTCTGCTTTCGGGATTaGGTGTGTGTACTCAAACACACAACAGAGGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: KPNSTKNLCFRD*VCVLKHTTEAQ Trigger: TTGTGCCTCTGTTGTGTGTTTGAGTACACACACTCAATCCCGAAAGCAGAGGTTTTTGGTAGAATTAGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTGGGGCCTGAAGGTCTaGCTGGTGCAGGCGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLCSALQPPERMEVIYCWGLKV*LVQAPL Trigger: AAGTGGCGCCTGCACCAGCCAGACCTTCAGGCCCCA...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATGCTGCCCAGGAATGCTaGACTCCAGGCTGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHAAQEC*TPGCHS Trigger: AGAGTGGCAGCCTGGAGTTCAGCATTCCTGGGCAGC...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCTCTCCGTGGAAAACCTaGCGGGGCTGTTTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNFGPSEDPLSHLTSPISSPWKT*RGCFHP Trigger: TGGATGGAAACAGCCCCGTCAGGTTTTCCACGGAGA...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCAGCCTTGCTGGGGCCTaGAGGTCTGGCTGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLYYMTDFLSQSPSSENLSLAGA*RSGWCR Trigger: CCTGCACCAGCCAGACCTTCAGGCCCCAGCAAGGCT...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGCAGAAGAGCTATTTACTGGGGCATTCCATTCCCTGGAGAGCTGGCTTCCGCTGCCTCCAGACACTaGAGAACTACCAAATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRRAIYWGIPFPGELASAASRH*RTTKSA Trigger: GGCGGATTTGGTAGTTCTGCAGTGTCTGGAGGCAGC...GGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTCTTCTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATTCATGGCTGCTGTGCTaGCTCCAGACACTGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHSWLLC*LQTLQN Trigger: GTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGA...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTCTCTGTGATCATGGCTaGTGTGCTGCCTCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLCSALQPPERMEVIYCLCDHG*CAASRH Trigger: GTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAG...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTCGCGCCAACACCCGATaGGAGTGGGATAGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQKRESDLITDGCEPPCRANTR*EWDSDD Trigger: GTCATCACTATCCCACTCCCATCGGGTGTTGGCGCG...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGACCCACTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NFGPSEDPLSH Trigger: ATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGCCCCTACATCACTGTTaGCTGGAAATGACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLASHPSHSLLWDCPASWPLHHC*LEMTSL Trigger: CAGAGAAGTCATTTCCAGTCAACAGTGATGTAGGGG...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGCCTTTCCCGCTTTCGTaGAGACTGCTGCTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QSSVGLPCFMDSILLPGKPFPLS*RLLLPT Trigger: TGTTGGCAGCAGCAGTCTGCACGAAAGCGGGAAAGG...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCTTTGGCATCAATCACTaGCAGGCACCACTCCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LNFGPSEDPLSHLTSPISFGINH*QAPLQR Trigger: ACGTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAA...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR CAA 72 bp | TCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTaGCCAGGGAAGGCAGGTGTTCAGAGGGAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVGLPCFMDSIL*PGKAGVQREIS Trigger: AGAGATCTCCCTCTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGGTTCTTGAGTCTCTCTaGCTGCTCGGAATACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLASHPSHSLLWDCPASWVLESL*LLGILS Trigger: AGAAAGTATTCCGAGCAGTCAGAGAGACTCAAGAAC...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCGGATGCGTCTGTAGCTaGACCCCTTTCTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNFGPSEDPLSHLTSPISGCVCS*TPFLSS Trigger: TGAAGATAAGAAAGGGGTGCAGCTACAGACGCATCC...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCGTGGAGCATGCACTTTaGTTGCTTCTGAGGTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNFGPSEDPLSHLTSPISVEHAL*LLLRYV Trigger: AACGTACCTCAGAAGCAACCAAAGTGCATGCTCCAC...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCCGCTTTCGTGCAGACTaGTGCTGCCAACAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLITDGCEPPCGCWDLNFRFRAD*CCQQHH Trigger: ATGGTGCTGTTGGCAGCAGCAGTCTGCACGAAAGCG...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATCAAGTTTCAAAGCCTTaGTGGGGCCTGAAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKRESDLITDQVSKP*WGLKVW Trigger: CCAGACCTTCAGGCCCCAGCAAGGCTTTGAAACTTG...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATAAGAAGTCATTAGGCTaGCCAGGAATGCTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHKKSLG*PGMLNS Trigger: GGAGTTCAGCATTCCTGGGCAGCCTAATGACTTCTT...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| 3UTR CAA 72 bp | GTCCATCCCGCCCAGTTCAGTGCTTGGCGGGTGGGATaGGCTGATTCAGCCTCTATTGAAAAGGTAATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHPAQFSAWRVG*ADSASIEKVID Trigger: ATCTATTACCTTTTCAATAGAGGCTGAATCAGCCAATCCCACCCGCCAAGCACTGAACTGGGCGGGATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATTTGAGTCTCTCTGACTaGTCGGAATACTTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHLSLSD*SEYFLL Trigger: GAGGAGAAAGTATTCCGAGCAGTCAGAGAGACTCAA...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCTTTCCCCTGTCTCTCTaGATCTCTTCGGGCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLYYMTDFLSQSPSSENLFPLSL*ISSGLL Trigger: CAACAGGCCCGAAGAGATGCAGAGAGACAGGGGAAA...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATTTATCCACATTTGGATaGGTCTGTAGCTGCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKRESDLITDLSTFG*VCSCTP Trigger: AGGGGTGCAGCTACAGACGCATCCAAATGTGGATAA...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGCTGTTTCCATCCACCTaGGTCACTTTGGTAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLREWRSSTVSHCYCLLFPST*VTLVTC Trigger: ACAGGTTACCAAAGTGACCCAGGTGGATGGAAACAG...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATTCTTCATTTTCTACATaGAGACGAATCCGGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHSSFST*RRIRPN Trigger: ATTTGGCCGGATTCGTCTTCATGTAGAAAATGAAGA...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACTGCAGGCGCCACTTTTaGTTTATCAGTTTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLLGFELRTFGRPTEPSHCRRHF*FISFND Trigger: ATCATTGAAACTGATAAACCAAAAGTGGCGCCTGCA...GTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCATATTAATAGGTaGAGCATGCACTTTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLCSALQPPERMEVIYCFHINR*SMHFGC Trigger: GCAACCAAAGTGCATGCTCCACCTATTAATATGGAA...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCAACACCCGATGGGAGTaGGATAGTGATGACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LLYYMTDFLSQSPSSENLNTRWE*DSDDHI Trigger: GATGTGGTCATCACTATCCCACTCCCATCGGGTGTT...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGTTAGCCTCACGTTCTTaGGTCTCTCTGACTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQKTSCENEARDKDSSLLASRS*VSLTAR Trigger: CCGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAA...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCGTTCGTACTCTATGTTaGCATCACAGCCATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCKYTVAVFRPSRRGSQIVRTLC*HHSHFH Trigger: GTGGAAATGGCTGTGATGTCAACATAGAGTACGAAC...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR GCA 90 bp | GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAAAGGTTCTGATCTGTaGCAGGTTAACATTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLITDGCEPPCGCWDLNFKGSDL*QVNILP Trigger: CGGGAGAATGTTAACCTGGCACAGATCAGAACCTTT...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR TCA 90 bp | ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCGCCAAATTTGTCATCTaGGATCCTAAGCATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCKYTVAVFRPSRRGSQIAKFVI*DPKHDH Trigger: ATGATCATGCTTAGGATCTCAGATGACAAATTTGGC...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATAGTTTCTCCATAGGTTaGTACACATATCTTACACTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKRESDLITDSFSIG*YTYLTL Trigger: GAGTGTAAGATATGTGTACCAACCTATGGAGAAACT...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGTGCCACTCTTATTTTTaGCATCAATCACTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQKTSCENEARDKDSSLCHSYF*HQSLAG Trigger: GCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCA...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR TCA 90 bp | CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGGTTTTCCAGTGTTCATaGGTTTTGGGAAAGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: LPQKTSCENEARDKDSSLVFQCS*VLGKLL Trigger: TAGCAGCTTTCCCAAAACTCATGAACACTGGAAAAC...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR GCA 90 bp | CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCAGCATGATCATGCCATaGAACTCCATATTCTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LLYYMTDFLSQSPSSENLSMIMP*NSIFCN Trigger: ATTACAGAATATGGAGTTGCATGGCATGATCATGCT...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCATTCAGGGATCACCCTaGAGAAGAGCCTTAAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LNFGPSEDPLSHLTSPISIQGSP*RRALKS Trigger: AGACTTTAAGGCTCTTCTCAAGGGTGATCCCTGAAT...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATCGAATCCGGCCAAATTaGTCATCTGAGATCCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: DSQHCLQLEGQGSQGRLHRIRPN*SSEILS Trigger: GCTTAGGATCTCAGATGACAAATTTGGCCGGATTCG...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCCCAAGTTTCAAAGCCTaGCTGGGGCCTGAAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLYYMTDFLSQSPSSENLPSFKA*LGPEGL Trigger: CAGACCTTCAGGCCCCAGCAAGGCTTTGAAACTTGG...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCGGTGGAGCATGCACTTaGGTTGCTTCTGAGGTACGT | + |
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Preference number: 5 (lower is better) Translates to: TCKYTVAVFRPSRRGSQIGGACT*VASEVR Trigger: ACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACC...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGCTGCCACTCTTATTTTaGGCATCAATCACTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QSSVGLPCFMDSILLPGKLPLLF*ASITGR Trigger: CCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAG...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGTCCACCTGGGTCACTTaGGTAACCTGTATGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CSHLREWRSSTVSHCYCLSTWVT*VTCMLQ Trigger: CTGCAACATACAGGTTACCAAAGTGACCCAGGTGGA...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGCCTGTTGTAATTCCTTaGCTTTACGCCGCATCTCAG | + |
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Preference number: 5 (lower is better) Translates to: CSHLREWRSSTVSHCYCLPVVIP*LYAASQ Trigger: CTGAGATGCGGCGTAAAGCAAAGGAATTACAACAGG...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CCA 90 bp | AATGCTGAACTCCAGGCTGCCACTCTTATTTTTGGCATCAATCACTaGCAGGCACCACTCCAACGTATTTCTCCGACTGTCATGTCGATA | + |
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Preference number: 5 (lower is better) Translates to: NAELQAATLIFGINH*QAPLQRISPTVMSI Trigger: TATCGACATGACAGTCGGAGAAATACGTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAGCCTGGAGTTCAGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGCTTAGCCTCACGTTCTaGAGTCTCTCTGACTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LPQKTSCENEARDKDSSLLSLTF*SLSDCS Trigger: CGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAAG...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 90 bp | TACTTTCTCCTCGTGAGAGTCCATTTCTGTAAAGGTTCTGATCTGTaGCAGGTTAACATTCTCCCGGTATCCCAGGGCAACAATTTCATC | + |
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Preference number: 5 (lower is better) Translates to: YFLLVRVHFCKGSDL*QVNILPVSQGNNFI Trigger: GATGAAATTGTTGCCCTGGGATACCGGGAGAATGTTAACCTGGCACAGATCAGAACCTTTACAGAAATGGACTCTCACGAGGAGAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 90 bp | CACTTTTGGTTTATCAGTTTCAATGATAGTCTCTGTGATCATGGCTaGTGTGCTGCCTCCAGACACTGCAGAACTACCAAATCCGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: HFWFISFNDSLCDHG*CAASRHCRTTKSAK Trigger: TTTGGCGGATTTGGTAGTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAGACTATCATTGAAACTGATAAACCAAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATCAGTTTCTCCATAGGTaGGTACACATATCTTACACT | + |
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Preference number: 5 (lower is better) Translates to: HCSCLQTLQKRESDLITDQFLHR*VHISYT Trigger: AGTGTAAGATATGTGTACCAACCTATGGAGAAACTG...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 90 bp | ATCCGGCCAAATTTGTCATCTGAGATCCTAAGCATGATCATGCCATaGAACTCCATATTCTGTAATCCTCCATCTCTCCCACAGGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: IRPNLSSEILSMIMP*NSIFCNPPSLPQVS Trigger: ACTAACCTGTGGGAGAGATGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATTTGGCCGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGAGTTCGTACTCTATGTaGACATCACAGCCATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LPQKTSCENEARDKDSSLSSYSM*TSQPFP Trigger: TGGAAATGGCTGTGATGTCAACATAGAGTACGAACT...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 90 bp | TCTTCAATCTTCATGTGCACACTTTCCATATTAATAGGTGGAGCATaGACTTTGGTTGCTTCTGAGGTACGTTTTCCCATATTAGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSIFMCTLSILIGGA*TLVASEVRFPILED Trigger: GTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTGCACATGAAGATTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS TCA 90 bp | CACACTTTCCATATTAATAGGTGGAGCATGCACTTTGGTTGCTTCTaGGGTACGTTTTCCCATATTAGAAGACATAATAGTTTCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: HTFHINRWSMHFGCF*GTFSHIRRHNSFTF Trigger: GAAGGTGAAACTATTATGTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CCA 90 bp | CTGTTCTTTGTAGTGATCAATACCATGTACAGTTTCTCCATAGGTTaGTACACATATCTTACACTCTCTGTTTCAACAAAAGTATGTTGT | + |
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Preference number: 5 (lower is better) Translates to: LFFVVINTMYSFSIG*YTYLTLSVSTKVCC Trigger: ACAACATACTTTTGTTGAAACAGAGAGTGTAAGATATGTGTACCAACCTATGGAGAAACTGTACATGGTATTGATCACTACAAAGAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 72 bp | CTCTGTGATCATGGCTGCTGTGCTGCCTCCAGACACTaGAGAACTACCAAATCCGCCAAATCCTGGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LCDHGCCAASRH*RTTKSAKSWCF Trigger: AAAGCACCAGGATTTGGCGGATTTGGTAGTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS TCA 72 bp | ATTTGTCCACTAAGAAAGTGGTCTCCGTGGAAAACCTaGCGGGGCTGTTTCCATCCACCTGGGTCACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: ICPLRKWSPWKT*RGCFHPPGSLW Trigger: CCAAAGTGACCCAGGTGGATGGAAACAGCCCCGTCAGGTTTTCCACGGAGACCACTTTCTTAGTGGACAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CCA 72 bp | CTCCAGGCTGCCACTCTTATTTTTGGCATCAATCACTaGCAGGCACCACTCCAACGTATTTCTCCGACTGTC | + |
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Preference number: 6 (lower is better) Translates to: LQAATLIFGINH*QAPLQRISPTV Trigger: GACAGTCGGAGAAATACGTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAGCCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 72 bp | TGCTTTACGCCGCATCTCAGCCTTAGCCTCACGTTCTaGAGTCTCTCTGACTGCTCGGAATACTTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: CFTPHLSLSLTF*SLSDCSEYFLL Trigger: GAGGAGAAAGTATTCCGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAAGGCTGAGATGCGGCGTAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 72 bp | CTCGTGAGAGTCCATTTCTGTAAAGGTTCTGATCTGTaGCAGGTTAACATTCTCCCGGTATCCCAGGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LVRVHFCKGSDL*QVNILPVSQGN Trigger: GTTGCCCTGGGATACCGGGAGAATGTTAACCTGGCACAGATCAGAACCTTTACAGAAATGGACTCTCACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 72 bp | CTCAGCCTTAGCCTCACGTTCTTGAGTCTCTCTGACTaGTCGGAATACTTTCTCCTCGTGAGAGTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: LSLSLTFLSLSD*SEYFLLVRVHF Trigger: GAAATGGACTCTCACGAGGAGAAAGTATTCCGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAAGGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 90 bp | GGCGCGCCAACACCCGATGGGAGTGGGATAGTGATGACCACATCATaGAGCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: GAPTPDGSGIVMTTS*SSKLSSCSSYSMLT Trigger: TGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGCTCAATGATGTGGTCATCACTATCCCACTCCCATCGGGTGTTGGCGCGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS TCA 72 bp | GCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTTaGCATCACAGCCATTTCCACTTTCCGAAGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALNYLPVVRTLC*HHSHFHFPKAS Trigger: GCTGGCCTTCGGAAAGTGGAAATGGCTGTGATGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 72 bp | TTTATCAGTTTCAATGATAGTCTCTGTGATCATGGCTaGTGTGCTGCCTCCAGACACTGCAGAACTACCAAA | + |
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Preference number: 6 (lower is better) Translates to: FISFNDSLCDHG*CAASRHCRTTK Trigger: TTTGGTAGTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAGACTATCATTGAAACTGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 72 bp | ACACCCGATGGGAGTGGGATAGTGATGACCACATCATaGAGCTCTAAATTATCTTCCTGTAGTTCGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: TPDGSGIVMTTS*SSKLSSCSSYS Trigger: AGAGTACGAACTACAGGAAGATAATTTAGAGCTCAATGATGTGGTCATCACTATCCCACTCCCATCGGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS TCA 72 bp | TTCTACATGAAGACGAATCCGGCCAAATTTGTCATCTaGGATCCTAAGCATGATCATGCCATGCAACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FYMKTNPAKFVI*DPKHDHAMQLH Trigger: ATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATTTGGCCGGATTCGTCTTCATGTAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 72 bp | AGCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTaGACATCACAGCCATTTCCACTTTCCGAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSKLSSCSSYSM*TSQPFPLSEGQ Trigger: CTGGCCTTCGGAAAGTGGAAATGGCTGTGATGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS TCA 72 bp | TTTGTAGTCTCCACTTTAGTACCCCTACATCACTGTTaGCTGGAAATGACTTCTCTGGGTTTTTCAAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: FVVSTLVPLHHC*LEMTSLGFSSQ Trigger: TTGGCTTGAAAAACCCAGAGAAGTCATTTCCAGTCAACAGTGATGTAGGGGTACTAAAGTGGAGACTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS GCA 72 bp | AATTTGTCATCTGAGATCCTAAGCATGATCATGCCATaGAACTCCATATTCTGTAATCCTCCATCTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NLSSEILSMIMP*NSIFCNPPSLP Trigger: TGGGAGAGATGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 72 bp | TGCACACTTTCCATATTAATAGGTGGAGCATGCACTTaGGTTGCTTCTGAGGTACGTTTTCCCATATTAGAA | + |
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Preference number: 6 (lower is better) Translates to: CTLSILIGGACT*VASEVRFPILE Trigger: TTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 90 bp | ACATCATTGAGCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTaGACATCACAGCCATTTCCACTTTCCGAAGGCCAGCAATTAATT | + |
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Preference number: 6 (lower is better) Translates to: TSLSSKLSSCSSYSM*TSQPFPLSEGQQLI Trigger: AATTAATTGCTGGCCTTCGGAAAGTGGAAATGGCTGTGATGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGCTCAATGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 90 bp | ATCTTCATGTGCACACTTTCCATATTAATAGGTGGAGCATGCACTTaGGTTGCTTCTGAGGTACGTTTTCCCATATTAGAAGACATAATA | + |
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Preference number: 6 (lower is better) Translates to: IFMCTLSILIGGACT*VASEVRFPILEDII Trigger: TATTATGTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTGCACATGAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS TCA 72 bp | CATATTAATAGGTGGAGCATGCACTTTGGTTGCTTCTaGGGTACGTTTTCCCATATTAGAAGACATAATAGT | + |
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Preference number: 6 (lower is better) Translates to: HINRWSMHFGCF*GTFSHIRRHNS Trigger: ACTATTATGTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 90 bp | GCTGTTCTTTGTAGTGATCAATACCATGTACAGTTTCTCCATAGGTaGGTACACATATCTTACACTCTCTGTTTCAACAAAAGTATGTTG | + |
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Preference number: 6 (lower is better) Translates to: AVLCSDQYHVQFLHR*VHISYTLCFNKSML Trigger: CAACATACTTTTGTTGAAACAGAGAGTGTAAGATATGTGTACCAACCTATGGAGAAACTGTACATGGTATTGATCACTACAAAGAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CAA 90 bp | ATCACCCTTGAGAAGAGCCTTAAAGTCTCCAAATCTTCTAAGATATaGCTGTTCTTTGTAGTGATCAATACCATGTACAGTTTCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: ITLEKSLKVSKSSKI*LFFVVINTMYSFSI Trigger: TATGGAGAAACTGTACATGGTATTGATCACTACAAAGAACAGCAATATCTTAGAAGATTTGGAGACTTTAAGGCTCTTCTCAAGGGTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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| CDS CCA 72 bp | GTAGTGATCAATACCATGTACAGTTTCTCCATAGGTTaGTACACATATCTTACACTCTCTGTTTCAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: VVINTMYSFSIG*YTYLTLSVSTK Trigger: TTTTGTTGAAACAGAGAGTGTAAGATATGTGTACCAACCTATGGAGAAACTGTACATGGTATTGATCACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034607.10 |
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