RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARCN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032096

Ensembl transcript IDs: ENSMUST00000034607.10

Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAAAGCATCTGGGAAGGGAGGAGGTGGACACGCGGAATCTGAGTaGACTACGTGCTTCAACTCAATCGCCCCACAGCACGGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: GKASGKGGGGHAESE*TTCFNSIAPQHGEN
Trigger: GTTCTCTCCGTGCTGTGGGGCGATTGAGTTGAAGCACGTAGTCCACTCAGATTCCGCGTGTCCACCTCCTCCCTTCCCAGATGCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 90 bp GTCATCTACTGTTTCCCATTGCTACTGCTTGCAGCCTTCAGCAACTaGTCGTCCATCCCGCCCAGTTCAGTGCTTGGCGGGTGGGATTGG +
Preference number: 1 (lower is better)
Translates to: VIYCFPLLLLAAFSN*SSIPPSSVLGGWDW
Trigger: CCAATCCCACCCGCCAAGCACTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 90 bp GCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATaGATAGTATACTCTTGCCAGGGAAGGCAGGTGTTCAGAGGGAGA +
Preference number: 1 (lower is better)
Translates to: ASHPSHSLLWDCPAS*IVYSCQGRQVFRGR
Trigger: TCTCCCTCTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 90 bp AGGGAAGGCAGGTGTTCAGAGGGAGATCTCTGCTCTGCTCTGCTCTaGAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGC +
Preference number: 1 (lower is better)
Translates to: REGRCSEGDLCSALL*SHLREWRSSTVSHC
Trigger: GCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCCTCTGAACACCTGCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 90 bp AGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTaGTTGCAGCCTTCAGCAACTGATCGTCCATCCCGCCCAGTTCAG +
Preference number: 1 (lower is better)
Translates to: SHLREWRSSTVSHCY*LQPSATDRPSRPVQ
Trigger: CTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 90 bp TTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTaGTTCATGGATAGTATACTCTTGCCAGGGAAGGCAGGTGTTCAG +
Preference number: 1 (lower is better)
Translates to: FFGKPSQPQSSVGLP*FMDSILLPGKAGVQ
Trigger: CTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 90 bp GAAATTTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTaGCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: EISLASHPSHSLLWD*PASWIVYSCQGRQV
Trigger: CACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 90 bp GAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTC +
Preference number: 1 (lower is better)
Translates to: ESDLITDGCEPPCGC*DLNFGPSEDPLSHL
Trigger: GAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 90 bp AGGCTAGAAATTTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTaGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: RLEISLASHPSHSLL*DCPASWIVYSCQGR
Trigger: CCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAAATTTCTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 90 bp GTGTCATTTGTCAAAAATGTCTCTGTGACACCGCAACACTGGGTGTaGGTTGAGGGTCCTTGCGCGCAGAGAACGTGCACTGTATCAGAA +
Preference number: 1 (lower is better)
Translates to: VSFVKNVSVTPQHWV*VEGPCAQRTCTVSE
Trigger: TTCTGATACAGTGCACGTTCTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGGTGTCACAGAGACATTTTTGACAAATGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 90 bp AAGGCAGAAGAGCTATTTACTGGGGCATTCCATTCCCTGGAGAGCTaGCTTCCTGCTGGCCAAAGAAATCAGCAGCCTTTCCCTTTATGT +
Preference number: 1 (lower is better)
Translates to: KAEELFTGAFHSLES*LPAGQRNQQPFPLC
Trigger: ACATAAAGGGAAAGGCTGCTGATTTCTTTGGCCAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTCTTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 90 bp CTGGCTACCTTTAATATTGACACAAATGGGATTCACAACACTGCCTaGAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATAAAGAGA +
Preference number: 1 (lower is better)
Translates to: LATFNIDTNGIHNTA*NWKGRAHKDDFIKR
Trigger: TCTCTTTATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATCCCATTTGTGTCAATATTAAAGGTAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 90 bp ACCTTTAATATTGACACAAATGGGATTCACAACACTGCCTGCAACTaGAAGGGCAGGGCTCACAAGGACGACTTCATAAAGAGATGGAGC +
Preference number: 1 (lower is better)
Translates to: TFNIDTNGIHNTACN*KGRAHKDDFIKRWS
Trigger: GCTCCATCTCTTTATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATCCCATTTGTGTCAATATTAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR TCA 90 bp TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGACACTGGGTGTGAGTTaGGGGTCCTTGCGCGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLASHPSHSLLWDCPASWTLGVS*GSLRAE
Trigger: CTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGT...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR TCA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATCCGCAACACTGGGTGTaGGTTGAGGGTCCTTGCGCG +
Preference number: 2 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHPQHWV*VEGPCA
Trigger: CGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGG...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCGCCCAGTTCAGTGCTTaGCGGGTGGGATTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: LNFGPSEDPLSHLTSPISAQFSA*RVGLAD
Trigger: ATCAGCCAATCCCACCCGCCAAGCACTGAACTGGGC...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGGCATTCCATTCCCTaGAGAGCTGGCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: TLQKRESDLITDGCEPPCGHSIP*RAGFLL
Trigger: CAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCC...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CAA 90 bp CACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTaGCAGCCTTCAGCAACTGATCGTCCATCCCGCCCAGTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: HLREWRSSTVSHCYC*QPSATDRPSRPVQC
Trigger: GCACTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CAA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGC +
Preference number: 2 (lower is better)
Translates to: DLITDGCEPPCGCWD*NFGPSEDPLSHLTS
Trigger: GCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR GCA 90 bp CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGTGCTCTGCTCTGCTCTaGAGCCACCTGAGAGAATGG +
Preference number: 2 (lower is better)
Translates to: QSSVGLPCFMDSILLPGKCSALL*SHLREW
Trigger: CCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCA...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR GCA 90 bp CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGATTCACAACACTGCCTaGAACTGGAAGGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: QSSVGLPCFMDSILLPGKIHNTA*NWKGRA
Trigger: AGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAAT...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR GCA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGGGAGATCTCTGCTCTaGTCTGCTCTGCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: DLITDGCEPPCGCWDLNFGRSLL*SALQPP
Trigger: AGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCC...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATAACACTGCCTGCAACTaGAAGGGCAGGGCTCACAAG +
Preference number: 2 (lower is better)
Translates to: HCSCLQTLQKRESDLITDNTACN*KGRAHK
Trigger: CTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTT...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR GCA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATTGCGCGCAGAGAACGTaGACTGTATCAGAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: HCSCLQTLQKRESDLITDCAQRT*TVSEKG
Trigger: CCCCTTTTCTGATACAGTGCACGTTCTCTGCGCGCA...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR GCA 90 bp ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTCCCATTGCTACTGCTTaGAGCCTTCAGCAACTGATC +
Preference number: 2 (lower is better)
Translates to: TLQKRESDLITDGCEPPCPIATA*SLQQLI
Trigger: GATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGG...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGTTGGGGGACCTCCAATaGCTTGTAAATTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: SLASHPSHSLLWDCPASWLGDLQ*LVNLEN
Trigger: GTTTTCCAAATTTACAAGCCATTGGAGGTCCCCCAA...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR GCA 90 bp ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGTTTCCCATTGCTACTaGTTGCAGCCTTCAGCAACT +
Preference number: 2 (lower is better)
Translates to: TLQKRESDLITDGCEPPCVSHCY*LQPSAT
Trigger: AGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAAC...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAGAGCTGGCTTCCTGCTaGCCAAAGAAATCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: FSSTLLHDRLPIPVPFLRELASC*PKKSAA
Trigger: GGCTGCTGATTTCTTTGGCCAGCAGGAAGCCAGCTC...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CAA 90 bp CAACTGATCGTCCATCCCGCCCAGTTCAGTGCTTGGCGGGTGGGATaGGCTGATTCAGCCTCTATTGAAAAGGTAATAGATCAAAATGAG +
Preference number: 2 (lower is better)
Translates to: QLIVHPAQFSAWRVG*ADSASIEKVIDQNE
Trigger: CTCATTTTGATCTATTACCTTTTCAATAGAGGCTGAATCAGCCAATCCCACCCGCCAAGCACTGAACTGGGCGGGATGGACGATCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR TCA 90 bp TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTGAAAGCAAAGGGGTGTaGAAGACTCAAATCCATAGA +
Preference number: 2 (lower is better)
Translates to: SLLCSALQPPERMEVIYCESKGV*KTQIHR
Trigger: TCTATGGATTTGAGTCTTTCACACCCCTTTGCTTTC...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR TCA 90 bp TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGATCAAAAATGTCTCTGTaGCACCGCAACACTGGGTGT +
Preference number: 2 (lower is better)
Translates to: FSSTLLHDRLPIPVPFLRSKMSL*HRNTGC
Trigger: ACACCCAGTGTTGCGGTGTCACAGAGACATTTTTGA...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR TCA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCGATGACCCCAGTGTGTaGCTAAGTGTACTGAAAGAA +
Preference number: 2 (lower is better)
Translates to: DLITDGCEPPCGCWDLNFDDPSV*LSVLKE
Trigger: TTCTTTCAGTACACTTAGTCACACACTGGGGTCATC...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR TCA 90 bp TGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACTCAAAATGCTACCACTaGAATGGTAAAGATGGATCT +
Preference number: 2 (lower is better)
Translates to: WLLGFELRTFGRPTEPSHSKCYH*NGKDGS
Trigger: AGATCCATCTTTACCATTTCAGTGGTAGCATTTTGA...GTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATAGATGGAGCAATGGATaGATACAGGAGAGAAAACAA +
Preference number: 2 (lower is better)
Translates to: HCSCLQTLQKRESDLITDRWSNG*IQERKQ
Trigger: TTGTTTTCTCTCCTGTATCCATCCATTGCTCCATCT...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAAGCTGCTTCCCAGCTaGCTACCTTTAATATTGACA +
Preference number: 2 (lower is better)
Translates to: DLITDGCEPPCGCWDLNFKLLPS*LPLILT
Trigger: TGTCAATATTAAAGGTAGCCAGCTGGGAAGCAGCTT...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CCA 90 bp TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAAGAGATGGAGCAATaGATGGATACAGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: FSSTLLHDRLPIPVPFLRKEMEQ*MDTGEK
Trigger: TTTCTCTCCTGTATCCATCCATTGCTCCATCTCTTT...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp CAGGGAAGGCAGGTGTTCAGAGGGAGATCTCTGCTCTaGTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTC +
Preference number: 3 (lower is better)
Translates to: QGRQVFRGRSLL*SALQPPERMEV
Trigger: GACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCCTCTGAACACCTGCCTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp AGCATCTGGGAAGGGAGGAGGTGGACACGCGGAATCTaGGTGGACTACGTGCTTCAACTCAATCGCCCCACA +
Preference number: 3 (lower is better)
Translates to: SIWEGRRWTRGI*VDYVLQLNRPT
Trigger: TGTGGGGCGATTGAGTTGAAGCACGTAGTCCACTCAGATTCCGCGTGTCCACCTCCTCCCTTCCCAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp TGTTTCCCATTGCTACTGCTTGCAGCCTTCAGCAACTaGTCGTCCATCCCGCCCAGTTCAGTGCTTGGCGGG +
Preference number: 3 (lower is better)
Translates to: CFPLLLLAAFSN*SSIPPSSVLGG
Trigger: CCCGCCAAGCACTGAACTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 72 bp CCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATaGATAGTATACTCTTGCCAGGGAAGGCAGGTGTTC +
Preference number: 3 (lower is better)
Translates to: PSHSLLWDCPAS*IVYSCQGRQVF
Trigger: GAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp AAATGTCTCTGTGACACCGCAACACTGGGTGTGAGTTaGGGGTCCTTGCGCGCAGAGAACGTGCACTGTATC +
Preference number: 3 (lower is better)
Translates to: KCLCDTATLGVS*GSLRAENVHCI
Trigger: GATACAGTGCACGTTCTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGGTGTCACAGAGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp GTCAAAAATGTCTCTGTGACACCGCAACACTGGGTGTaGGTTGAGGGTCCTTGCGCGCAGAGAACGTGCACT +
Preference number: 3 (lower is better)
Translates to: VKNVSVTPQHWV*VEGPCAQRTCT
Trigger: AGTGCACGTTCTCTGCGCGCAAGGACCCTCAACTCACACCCAGTGTTGCGGTGTCACAGAGACATTTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp CTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTaGCAGGGAAGGCAGGTGTTCAGAGGGAGATCTCTG +
Preference number: 3 (lower is better)
Translates to: LWDCPASWIVYS*QGRQVFRGRSL
Trigger: CAGAGATCTCCCTCTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp AAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTaGTTCATGGATAGTATACTCTTGCCAGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: KPSQPQSSVGLP*FMDSILLPGKA
Trigger: TGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp TTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTaGCCTGCTTCATGGATAGTATACTCTTGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: LASHPSHSLLWD*PASWIVYSCQG
Trigger: TCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp AATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTaGAGCCTTCAGCAACTGATCGTCCATCCCGCCCAG +
Preference number: 3 (lower is better)
Translates to: NGGHLLFPIATA*SLQQLIVHPAQ
Trigger: CTGGGCGGGATGGACGATCAGTTGCTGAAGGCTGCAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp AGGTGTTCAGAGGGAGATCTCTGCTCTGCTCTGCTCTaGAGCCACCTGAGAGAATGGAGGTCATCTACTGTT +
Preference number: 3 (lower is better)
Translates to: RCSEGDLCSALL*SHLREWRSSTV
Trigger: AACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGATCTCCCTCTGAACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 72 bp GAGCTATTTACTGGGGCATTCCATTCCCTGGAGAGCTaGCTTCCTGCTGGCCAAAGAAATCAGCAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: ELFTGAFHSLES*LPAGQRNQQPF
Trigger: GAAAGGCTGCTGATTTCTTTGGCCAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 72 bp AGGCAGAAGAGCTATTTACTGGGGCATTCCATTCCCTaGAGAGCTGGCTTCCTGCTGGCCAAAGAAATCAGC +
Preference number: 3 (lower is better)
Translates to: RQKSYLLGHSIP*RAGFLLAKEIS
Trigger: GCTGATTTCTTTGGCCAGCAGGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTCTTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 72 bp CTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGACCCACTG +
Preference number: 3 (lower is better)
Translates to: LITDGCEPPCGC*DLNFGPSEDPL
Trigger: CAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CAA 90 bp TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGGCTTGGCGGGTGGGATaGGCTGATTCAGCCTCTATT +
Preference number: 3 (lower is better)
Translates to: CSHLREWRSSTVSHCYCLAWRVG*ADSASI
Trigger: AATAGAGGCTGAATCAGCCAATCCCACCCGCCAAGC...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTCGGACCTTCGGAAGACCCA +
Preference number: 3 (lower is better)
Translates to: DLITDGCEPPCG*WDLNFGPSEDP
Trigger: TGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CCA 72 bp ATTTCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTaGGACTGCCCTGCTTCATGGATAGTATACTCTTGC +
Preference number: 3 (lower is better)
Translates to: ISLASHPSHSLL*DCPASWIVYSC
Trigger: GCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CAA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAGGCTAGAAATTTCTTaGGCAAGCCATCCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: DLITDGCEPPCGCWDLNFRLEIS*ASHPSH
Trigger: GTGGCTGGGATGGCTTGCCAAAGAAATTTCTAGCCT...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CAA 90 bp ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCCCTCTGCTTTCGGGATaGAGTGTGTGTACTCAAACA +
Preference number: 3 (lower is better)
Translates to: TCKYTVAVFRPSRRGSQIPLLSG*SVCTQT
Trigger: TGTTTGAGTACACACACTCAATCCCGAAAGCAGAGG...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp GCATCCCCCATCCCTATTCATTTACTCATCACTGTCTaGCAAAGGGCAGGCTTCAGGATACTGCAGAATGAT +
Preference number: 3 (lower is better)
Translates to: ASPIPIHLLITV*QRAGFRILQND
Trigger: ATCATTCTGCAGTATCCTGAAGCCTGCCCTTTGTCAGACAGTGATGAGTAAATGAATAGGGATGGGGGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR GCA 72 bp TTTAATATTGACACAAATGGGATTCACAACACTGCCTaGAACTGGAAGGGCAGGGCTCACAAGGACGACTTC +
Preference number: 3 (lower is better)
Translates to: FNIDTNGIHNTA*NWKGRAHKDDF
Trigger: GAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATCCCATTTGTGTCAATATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CAA 90 bp TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGTGGCTACCTTTAATATaGACACAAATGGGATTCACA +
Preference number: 3 (lower is better)
Translates to: CSHLREWRSSTVSHCYCLWLPLI*TQMGFT
Trigger: TGTGAATCCCATTTGTGTCAATATTAAAGGTAGCCA...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR-3UTR CAA 90 bp TTCTCGTCTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGATTAGATGGGGTATATTaGAGTAACCCCTCACTATAC +
Preference number: 3 (lower is better)
Translates to: FSSTLLHDRLPIPVPFLRLDGVY*SNPSLY
Trigger: GTATAGTGAGGGGTTACTCAAATATACCCCATCTAA...TCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAGACGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp TGTTCTCAGAGTGCTGAACACAGTACAACAGACAGATaGCCCCAGTGTGTGACTAAGTGTACTGAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: CSQSAEHSTTDR*PQCVTKCTERK
Trigger: TTTTCTTTCAGTACACTTAGTCACACACTGGGGTCATCTGTCTGTTGTACTGTGTTCAGCACTCTGAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR TCA 72 bp AAGCCTAATTCTACCAAAAACCTCTGCTTTCGGGATTaGGTGTGTGTACTCAAACACACAACAGAGGCACAA +
Preference number: 3 (lower is better)
Translates to: KPNSTKNLCFRD*VCVLKHTTEAQ
Trigger: TTGTGCCTCTGTTGTGTGTTTGAGTACACACACTCAATCCCGAAAGCAGAGGTTTTTGGTAGAATTAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTGGGGCCTGAAGGTCTaGCTGGTGCAGGCGCCACTT +
Preference number: 4 (lower is better)
Translates to: SLLCSALQPPERMEVIYCWGLKV*LVQAPL
Trigger: AAGTGGCGCCTGCACCAGCCAGACCTTCAGGCCCCA...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATGCTGCCCAGGAATGCTaGACTCCAGGCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHAAQEC*TPGCHS
Trigger: AGAGTGGCAGCCTGGAGTTCAGCATTCCTGGGCAGC...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCTCTCCGTGGAAAACCTaGCGGGGCTGTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: LNFGPSEDPLSHLTSPISSPWKT*RGCFHP
Trigger: TGGATGGAAACAGCCCCGTCAGGTTTTCCACGGAGA...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCAGCCTTGCTGGGGCCTaGAGGTCTGGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLYYMTDFLSQSPSSENLSLAGA*RSGWCR
Trigger: CCTGCACCAGCCAGACCTTCAGGCCCCAGCAAGGCT...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp GAAGGCAGAAGAGCTATTTACTGGGGCATTCCATTCCCTGGAGAGCTGGCTTCCGCTGCCTCCAGACACTaGAGAACTACCAAATCCGCC +
Preference number: 4 (lower is better)
Translates to: EGRRAIYWGIPFPGELASAASRH*RTTKSA
Trigger: GGCGGATTTGGTAGTTCTGCAGTGTCTGGAGGCAGC...GGAAGCCAGCTCTCCAGGGAATGGAATGCCCCAGTAAATAGCTCTTCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATTCATGGCTGCTGTGCTaGCTCCAGACACTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHSWLLC*LQTLQN
Trigger: GTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGA...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTCTCTGTGATCATGGCTaGTGTGCTGCCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SLLCSALQPPERMEVIYCLCDHG*CAASRH
Trigger: GTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAG...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp ACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTCGCGCCAACACCCGATaGGAGTGGGATAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: TLQKRESDLITDGCEPPCRANTR*EWDSDD
Trigger: GTCATCACTATCCCACTCCCATCGGGTGTTGGCGCG...ACATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CAA 72 bp ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGACCCACTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TDGCEPPCGCWD*NFGPSEDPLSH
Trigger: ATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGCCCCTACATCACTGTTaGCTGGAAATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLASHPSHSLLWDCPASWPLHHC*LEMTSL
Trigger: CAGAGAAGTCATTTCCAGTCAACAGTGATGTAGGGG...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGCCTTTCCCGCTTTCGTaGAGACTGCTGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: QSSVGLPCFMDSILLPGKPFPLS*RLLLPT
Trigger: TGTTGGCAGCAGCAGTCTGCACGAAAGCGGGAAAGG...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCTTTGGCATCAATCACTaGCAGGCACCACTCCAACGT +
Preference number: 4 (lower is better)
Translates to: LNFGPSEDPLSHLTSPISFGINH*QAPLQR
Trigger: ACGTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAA...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CAA 72 bp TCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTaGCCAGGGAAGGCAGGTGTTCAGAGGGAGATCTCT +
Preference number: 4 (lower is better)
Translates to: SVGLPCFMDSIL*PGKAGVQREIS
Trigger: AGAGATCTCCCTCTGAACACCTGCCTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp TCTTTGGCAAGCCATCCCAGCCACAGTCTTCTGTGGGACTGCCCTGCTTCATGGGTTCTTGAGTCTCTCTaGCTGCTCGGAATACTTTCT +
Preference number: 4 (lower is better)
Translates to: SLASHPSHSLLWDCPASWVLESL*LLGILS
Trigger: AGAAAGTATTCCGAGCAGTCAGAGAGACTCAAGAAC...CCATGAAGCAGGGCAGTCCCACAGAAGACTGTGGCTGGGATGGCTTGCCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCGGATGCGTCTGTAGCTaGACCCCTTTCTTATCTTCA +
Preference number: 4 (lower is better)
Translates to: LNFGPSEDPLSHLTSPISGCVCS*TPFLSS
Trigger: TGAAGATAAGAAAGGGGTGCAGCTACAGACGCATCC...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCGTGGAGCATGCACTTTaGTTGCTTCTGAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: LNFGPSEDPLSHLTSPISVEHAL*LLLRYV
Trigger: AACGTACCTCAGAAGCAACCAAAGTGCATGCTCCAC...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCCGCTTTCGTGCAGACTaGTGCTGCCAACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: DLITDGCEPPCGCWDLNFRFRAD*CCQQHH
Trigger: ATGGTGCTGTTGGCAGCAGCAGTCTGCACGAAAGCG...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATCAAGTTTCAAAGCCTTaGTGGGGCCTGAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HCSCLQTLQKRESDLITDQVSKP*WGLKVW
Trigger: CCAGACCTTCAGGCCCCAGCAAGGCTTTGAAACTTG...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATAAGAAGTCATTAGGCTaGCCAGGAATGCTGAACTCC +
Preference number: 4 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHKKSLG*PGMLNS
Trigger: GGAGTTCAGCATTCCTGGGCAGCCTAATGACTTCTT...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
3UTR CAA 72 bp GTCCATCCCGCCCAGTTCAGTGCTTGGCGGGTGGGATaGGCTGATTCAGCCTCTATTGAAAAGGTAATAGAT +
Preference number: 4 (lower is better)
Translates to: VHPAQFSAWRVG*ADSASIEKVID
Trigger: ATCTATTACCTTTTCAATAGAGGCTGAATCAGCCAATCCCACCCGCCAAGCACTGAACTGGGCGGGATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATTTGAGTCTCTCTGACTaGTCGGAATACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHLSLSD*SEYFLL
Trigger: GAGGAGAAAGTATTCCGAGCAGTCAGAGAGACTCAA...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCTTTCCCCTGTCTCTCTaGATCTCTTCGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLYYMTDFLSQSPSSENLFPLSL*ISSGLL
Trigger: CAACAGGCCCGAAGAGATGCAGAGAGACAGGGGAAA...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATTTATCCACATTTGGATaGGTCTGTAGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: HCSCLQTLQKRESDLITDLSTFG*VCSCTP
Trigger: AGGGGTGCAGCTACAGACGCATCCAAATGTGGATAA...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGCTGTTTCCATCCACCTaGGTCACTTTGGTAACCTGT +
Preference number: 4 (lower is better)
Translates to: CSHLREWRSSTVSHCYCLLFPST*VTLVTC
Trigger: ACAGGTTACCAAAGTGACCCAGGTGGATGGAAACAG...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATTCTTCATTTTCTACATaGAGACGAATCCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHSSFST*RRIRPN
Trigger: ATTTGGCCGGATTCGTCTTCATGTAGAAAATGAAGA...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp TGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACTGCAGGCGCCACTTTTaGTTTATCAGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: WLLGFELRTFGRPTEPSHCRRHF*FISFND
Trigger: ATCATTGAAACTGATAAACCAAAAGTGGCGCCTGCA...GTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp TCTCTGCTCTGCTCTGCTCTGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCATATTAATAGGTaGAGCATGCACTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SLLCSALQPPERMEVIYCFHINR*SMHFGC
Trigger: GCAACCAAAGTGCATGCTCCACCTATTAATATGGAA...ACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCAGAGCAGAGCAGAGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCAACACCCGATGGGAGTaGGATAGTGATGACCACATC +
Preference number: 4 (lower is better)
Translates to: LLYYMTDFLSQSPSSENLNTRWE*DSDDHI
Trigger: GATGTGGTCATCACTATCCCACTCCCATCGGGTGTT...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGTTAGCCTCACGTTCTTaGGTCTCTCTGACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LPQKTSCENEARDKDSSLLASRS*VSLTAR
Trigger: CCGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAA...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCGTTCGTACTCTATGTTaGCATCACAGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: TCKYTVAVFRPSRRGSQIVRTLC*HHSHFH
Trigger: GTGGAAATGGCTGTGATGTCAACATAGAGTACGAAC...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp GATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAAAGGTTCTGATCTGTaGCAGGTTAACATTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DLITDGCEPPCGCWDLNFKGSDL*QVNILP
Trigger: CGGGAGAATGTTAACCTGGCACAGATCAGAACCTTT...GAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCGCCAAATTTGTCATCTaGGATCCTAAGCATGATCAT +
Preference number: 4 (lower is better)
Translates to: TCKYTVAVFRPSRRGSQIAKFVI*DPKHDH
Trigger: ATGATCATGCTTAGGATCTCAGATGACAAATTTGGC...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATAGTTTCTCCATAGGTTaGTACACATATCTTACACTC +
Preference number: 4 (lower is better)
Translates to: HCSCLQTLQKRESDLITDSFSIG*YTYLTL
Trigger: GAGTGTAAGATATGTGTACCAACCTATGGAGAAACT...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CCA 90 bp CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGTGCCACTCTTATTTTTaGCATCAATCACTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPQKTSCENEARDKDSSLCHSYF*HQSLAG
Trigger: GCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCA...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR TCA 90 bp CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGGTTTTCCAGTGTTCATaGGTTTTGGGAAAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LPQKTSCENEARDKDSSLVFQCS*VLGKLL
Trigger: TAGCAGCTTTCCCAAAACTCATGAACACTGGAAAAC...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR GCA 90 bp CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCAGCATGATCATGCCATaGAACTCCATATTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLYYMTDFLSQSPSSENLSMIMP*NSIFCN
Trigger: ATTACAGAATATGGAGTTGCATGGCATGATCATGCT...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp TTGAACTTCGGACCTTCGGAAGACCCACTGAGCCATCTCACCAGCCCGATAAGCATTCAGGGATCACCCTaGAGAAGAGCCTTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: LNFGPSEDPLSHLTSPISIQGSP*RRALKS
Trigger: AGACTTTAAGGCTCTTCTCAAGGGTGATCCCTGAAT...GCTTATCGGGCTGGTGAGATGGCTCAGTGGGTCTTCCGAAGGTCCGAAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp GATTCACAACACTGCCTGCAACTGGAAGGGCAGGGCTCACAAGGACGACTTCATCGAATCCGGCCAAATTaGTCATCTGAGATCCTAAGC +
Preference number: 5 (lower is better)
Translates to: DSQHCLQLEGQGSQGRLHRIRPN*SSEILS
Trigger: GCTTAGGATCTCAGATGACAAATTTGGCCGGATTCG...ATGAAGTCGTCCTTGTGAGCCCTGCCCTTCCAGTTGCAGGCAGTGTTGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp CTACTTTACTACATGACAGACTTCCTATCCCAGTCCCCTTCCTCAGAAAACCTCCCAAGTTTCAAAGCCTaGCTGGGGCCTGAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: LLYYMTDFLSQSPSSENLPSFKA*LGPEGL
Trigger: CAGACCTTCAGGCCCCAGCAAGGCTTTGAAACTTGG...GAGGTTTTCTGAGGAAGGGGACTGGGATAGGAAGTCTGTCATGTAGTAAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp ACATGTAAGTACACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCGGTGGAGCATGCACTTaGGTTGCTTCTGAGGTACGT +
Preference number: 5 (lower is better)
Translates to: TCKYTVAVFRPSRRGSQIGGACT*VASEVR
Trigger: ACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACC...GATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTGTACTTACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp CAGTCTTCTGTGGGACTGCCCTGCTTCATGGATAGTATACTCTTGCCAGGGAAGCTGCCACTCTTATTTTaGGCATCAATCACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QSSVGLPCFMDSILLPGKLPLLF*ASITGR
Trigger: CCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAG...CTTCCCTGGCAAGAGTATACTATCCATGAAGCAGGGCAGTCCCACAGAAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGTCCACCTGGGTCACTTaGGTAACCTGTATGTTGCAG +
Preference number: 5 (lower is better)
Translates to: CSHLREWRSSTVSHCYCLSTWVT*VTCMLQ
Trigger: CTGCAACATACAGGTTACCAAAGTGACCCAGGTGGA...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp TGCAGCCACCTGAGAGAATGGAGGTCATCTACTGTTTCCCATTGCTACTGCTTGCCTGTTGTAATTCCTTaGCTTTACGCCGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: CSHLREWRSSTVSHCYCLPVVIP*LYAASQ
Trigger: CTGAGATGCGGCGTAAAGCAAAGGAATTACAACAGG...CAAGCAGTAGCAATGGGAAACAGTAGATGACCTCCATTCTCTCAGGTGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CCA 90 bp AATGCTGAACTCCAGGCTGCCACTCTTATTTTTGGCATCAATCACTaGCAGGCACCACTCCAACGTATTTCTCCGACTGTCATGTCGATA +
Preference number: 5 (lower is better)
Translates to: NAELQAATLIFGINH*QAPLQRISPTVMSI
Trigger: TATCGACATGACAGTCGGAGAAATACGTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAGCCTGGAGTTCAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGCTTAGCCTCACGTTCTaGAGTCTCTCTGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: LPQKTSCENEARDKDSSLLSLTF*SLSDCS
Trigger: CGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAAG...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 90 bp TACTTTCTCCTCGTGAGAGTCCATTTCTGTAAAGGTTCTGATCTGTaGCAGGTTAACATTCTCCCGGTATCCCAGGGCAACAATTTCATC +
Preference number: 5 (lower is better)
Translates to: YFLLVRVHFCKGSDL*QVNILPVSQGNNFI
Trigger: GATGAAATTGTTGCCCTGGGATACCGGGAGAATGTTAACCTGGCACAGATCAGAACCTTTACAGAAATGGACTCTCACGAGGAGAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 90 bp CACTTTTGGTTTATCAGTTTCAATGATAGTCTCTGTGATCATGGCTaGTGTGCTGCCTCCAGACACTGCAGAACTACCAAATCCGCCAAA +
Preference number: 5 (lower is better)
Translates to: HFWFISFNDSLCDHG*CAASRHCRTTKSAK
Trigger: TTTGGCGGATTTGGTAGTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAGACTATCATTGAAACTGATAAACCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp CACTGTAGCTGTCTTCAGACCCTCCAGAAGAGGGAGTCAGATCTCATTACGGATCAGTTTCTCCATAGGTaGGTACACATATCTTACACT +
Preference number: 5 (lower is better)
Translates to: HCSCLQTLQKRESDLITDQFLHR*VHISYT
Trigger: AGTGTAAGATATGTGTACCAACCTATGGAGAAACTG...ATCCGTAATGAGATCTGACTCCCTCTTCTGGAGGGTCTGAAGACAGCTACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 90 bp ATCCGGCCAAATTTGTCATCTGAGATCCTAAGCATGATCATGCCATaGAACTCCATATTCTGTAATCCTCCATCTCTCCCACAGGTTAGT +
Preference number: 5 (lower is better)
Translates to: IRPNLSSEILSMIMP*NSIFCNPPSLPQVS
Trigger: ACTAACCTGTGGGAGAGATGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATTTGGCCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS-3UTR CAA 90 bp CTTCCTCAGAAAACCTCATGTGAAAACGAAGCTAGAGATAAGGATTCTTCCCTGAGTTCGTACTCTATGTaGACATCACAGCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: LPQKTSCENEARDKDSSLSSYSM*TSQPFP
Trigger: TGGAAATGGCTGTGATGTCAACATAGAGTACGAACT...CAGGGAAGAATCCTTATCTCTAGCTTCGTTTTCACATGAGGTTTTCTGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 90 bp TCTTCAATCTTCATGTGCACACTTTCCATATTAATAGGTGGAGCATaGACTTTGGTTGCTTCTGAGGTACGTTTTCCCATATTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: SSIFMCTLSILIGGA*TLVASEVRFPILED
Trigger: GTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTGCACATGAAGATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS TCA 90 bp CACACTTTCCATATTAATAGGTGGAGCATGCACTTTGGTTGCTTCTaGGGTACGTTTTCCCATATTAGAAGACATAATAGTTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: HTFHINRWSMHFGCF*GTFSHIRRHNSFTF
Trigger: GAAGGTGAAACTATTATGTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CCA 90 bp CTGTTCTTTGTAGTGATCAATACCATGTACAGTTTCTCCATAGGTTaGTACACATATCTTACACTCTCTGTTTCAACAAAAGTATGTTGT +
Preference number: 5 (lower is better)
Translates to: LFFVVINTMYSFSIG*YTYLTLSVSTKVCC
Trigger: ACAACATACTTTTGTTGAAACAGAGAGTGTAAGATATGTGTACCAACCTATGGAGAAACTGTACATGGTATTGATCACTACAAAGAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 72 bp CTCTGTGATCATGGCTGCTGTGCTGCCTCCAGACACTaGAGAACTACCAAATCCGCCAAATCCTGGTGCTTT +
Preference number: 6 (lower is better)
Translates to: LCDHGCCAASRH*RTTKSAKSWCF
Trigger: AAAGCACCAGGATTTGGCGGATTTGGTAGTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS TCA 72 bp ATTTGTCCACTAAGAAAGTGGTCTCCGTGGAAAACCTaGCGGGGCTGTTTCCATCCACCTGGGTCACTTTGG +
Preference number: 6 (lower is better)
Translates to: ICPLRKWSPWKT*RGCFHPPGSLW
Trigger: CCAAAGTGACCCAGGTGGATGGAAACAGCCCCGTCAGGTTTTCCACGGAGACCACTTTCTTAGTGGACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CCA 72 bp CTCCAGGCTGCCACTCTTATTTTTGGCATCAATCACTaGCAGGCACCACTCCAACGTATTTCTCCGACTGTC +
Preference number: 6 (lower is better)
Translates to: LQAATLIFGINH*QAPLQRISPTV
Trigger: GACAGTCGGAGAAATACGTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAGCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 72 bp TGCTTTACGCCGCATCTCAGCCTTAGCCTCACGTTCTaGAGTCTCTCTGACTGCTCGGAATACTTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: CFTPHLSLSLTF*SLSDCSEYFLL
Trigger: GAGGAGAAAGTATTCCGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAAGGCTGAGATGCGGCGTAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 72 bp CTCGTGAGAGTCCATTTCTGTAAAGGTTCTGATCTGTaGCAGGTTAACATTCTCCCGGTATCCCAGGGCAAC +
Preference number: 6 (lower is better)
Translates to: LVRVHFCKGSDL*QVNILPVSQGN
Trigger: GTTGCCCTGGGATACCGGGAGAATGTTAACCTGGCACAGATCAGAACCTTTACAGAAATGGACTCTCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 72 bp CTCAGCCTTAGCCTCACGTTCTTGAGTCTCTCTGACTaGTCGGAATACTTTCTCCTCGTGAGAGTCCATTTC +
Preference number: 6 (lower is better)
Translates to: LSLSLTFLSLSD*SEYFLLVRVHF
Trigger: GAAATGGACTCTCACGAGGAGAAAGTATTCCGAGCAGTCAGAGAGACTCAAGAACGTGAGGCTAAGGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 90 bp GGCGCGCCAACACCCGATGGGAGTGGGATAGTGATGACCACATCATaGAGCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTTGACA +
Preference number: 6 (lower is better)
Translates to: GAPTPDGSGIVMTTS*SSKLSSCSSYSMLT
Trigger: TGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGCTCAATGATGTGGTCATCACTATCCCACTCCCATCGGGTGTTGGCGCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS TCA 72 bp GCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTTaGCATCACAGCCATTTCCACTTTCCGAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ALNYLPVVRTLC*HHSHFHFPKAS
Trigger: GCTGGCCTTCGGAAAGTGGAAATGGCTGTGATGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 72 bp TTTATCAGTTTCAATGATAGTCTCTGTGATCATGGCTaGTGTGCTGCCTCCAGACACTGCAGAACTACCAAA +
Preference number: 6 (lower is better)
Translates to: FISFNDSLCDHG*CAASRHCRTTK
Trigger: TTTGGTAGTTCTGCAGTGTCTGGAGGCAGCACAGCAGCCATGATCACAGAGACTATCATTGAAACTGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 72 bp ACACCCGATGGGAGTGGGATAGTGATGACCACATCATaGAGCTCTAAATTATCTTCCTGTAGTTCGTACTCT +
Preference number: 6 (lower is better)
Translates to: TPDGSGIVMTTS*SSKLSSCSSYS
Trigger: AGAGTACGAACTACAGGAAGATAATTTAGAGCTCAATGATGTGGTCATCACTATCCCACTCCCATCGGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS TCA 72 bp TTCTACATGAAGACGAATCCGGCCAAATTTGTCATCTaGGATCCTAAGCATGATCATGCCATGCAACTCCAT +
Preference number: 6 (lower is better)
Translates to: FYMKTNPAKFVI*DPKHDHAMQLH
Trigger: ATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATTTGGCCGGATTCGTCTTCATGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 72 bp AGCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTaGACATCACAGCCATTTCCACTTTCCGAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SSKLSSCSSYSM*TSQPFPLSEGQ
Trigger: CTGGCCTTCGGAAAGTGGAAATGGCTGTGATGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS TCA 72 bp TTTGTAGTCTCCACTTTAGTACCCCTACATCACTGTTaGCTGGAAATGACTTCTCTGGGTTTTTCAAGCCAA +
Preference number: 6 (lower is better)
Translates to: FVVSTLVPLHHC*LEMTSLGFSSQ
Trigger: TTGGCTTGAAAAACCCAGAGAAGTCATTTCCAGTCAACAGTGATGTAGGGGTACTAAAGTGGAGACTACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS GCA 72 bp AATTTGTCATCTGAGATCCTAAGCATGATCATGCCATaGAACTCCATATTCTGTAATCCTCCATCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: NLSSEILSMIMP*NSIFCNPPSLP
Trigger: TGGGAGAGATGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 72 bp TGCACACTTTCCATATTAATAGGTGGAGCATGCACTTaGGTTGCTTCTGAGGTACGTTTTCCCATATTAGAA +
Preference number: 6 (lower is better)
Translates to: CTLSILIGGACT*VASEVRFPILE
Trigger: TTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 90 bp ACATCATTGAGCTCTAAATTATCTTCCTGTAGTTCGTACTCTATGTaGACATCACAGCCATTTCCACTTTCCGAAGGCCAGCAATTAATT +
Preference number: 6 (lower is better)
Translates to: TSLSSKLSSCSSYSM*TSQPFPLSEGQQLI
Trigger: AATTAATTGCTGGCCTTCGGAAAGTGGAAATGGCTGTGATGTCAACATAGAGTACGAACTACAGGAAGATAATTTAGAGCTCAATGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 90 bp ATCTTCATGTGCACACTTTCCATATTAATAGGTGGAGCATGCACTTaGGTTGCTTCTGAGGTACGTTTTCCCATATTAGAAGACATAATA +
Preference number: 6 (lower is better)
Translates to: IFMCTLSILIGGACT*VASEVRFPILEDII
Trigger: TATTATGTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATGGAAAGTGTGCACATGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS TCA 72 bp CATATTAATAGGTGGAGCATGCACTTTGGTTGCTTCTaGGGTACGTTTTCCCATATTAGAAGACATAATAGT +
Preference number: 6 (lower is better)
Translates to: HINRWSMHFGCF*GTFSHIRRHNS
Trigger: ACTATTATGTCTTCTAATATGGGAAAACGTACCTCAGAAGCAACCAAAGTGCATGCTCCACCTATTAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 90 bp GCTGTTCTTTGTAGTGATCAATACCATGTACAGTTTCTCCATAGGTaGGTACACATATCTTACACTCTCTGTTTCAACAAAAGTATGTTG +
Preference number: 6 (lower is better)
Translates to: AVLCSDQYHVQFLHR*VHISYTLCFNKSML
Trigger: CAACATACTTTTGTTGAAACAGAGAGTGTAAGATATGTGTACCAACCTATGGAGAAACTGTACATGGTATTGATCACTACAAAGAACAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CAA 90 bp ATCACCCTTGAGAAGAGCCTTAAAGTCTCCAAATCTTCTAAGATATaGCTGTTCTTTGTAGTGATCAATACCATGTACAGTTTCTCCATA +
Preference number: 6 (lower is better)
Translates to: ITLEKSLKVSKSSKI*LFFVVINTMYSFSI
Trigger: TATGGAGAAACTGTACATGGTATTGATCACTACAAAGAACAGCAATATCTTAGAAGATTTGGAGACTTTAAGGCTCTTCTCAAGGGTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10
CDS CCA 72 bp GTAGTGATCAATACCATGTACAGTTTCTCCATAGGTTaGTACACATATCTTACACTCTCTGTTTCAACAAAA +
Preference number: 6 (lower is better)
Translates to: VVINTMYSFSIG*YTYLTLSVSTK
Trigger: TTTTGTTGAAACAGAGAGTGTAAGATATGTGTACCAACCTATGGAGAAACTGTACATGGTATTGATCACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034607.10