Pregenerated sensors for ARC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022602Ensembl transcript IDs: ENSMUST00000023268.14, ENSMUST00000110009.4
Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGCCTAGGAGCCAAGGCCTGGGGTCTCCTGGGACTGGGCTTGACCTaGCAGGCAGGGCACAGCAGGAAAGATCAGGCTGGGCAGGGGCCC | + |
Preference number: 1 (lower is better) Translates to: SLGAKAWGLLGLGLT*QAGHSRKDQAGQGP Trigger: GGGCCCCTGCCCAGCCTGATCTTTCCTGCTGTGCCCTGCCTGCCAGGTCAAGCCCAGTCCCAGGAGACCCCAGGCCTTGGCTCCTAGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | ATCAGGCTGGGCAGGGGCCCAAGCCTTAAGGCTCCTGCAAGGGTCTaGTCGGGGAGCCAAAGGCCATGCAGCGAGCTGGGCTCTGTGCCA | + |
Preference number: 1 (lower is better) Translates to: IRLGRGPSLKAPARV*SGSQRPCSELGSVP Trigger: TGGCACAGAGCCCAGCTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAGGCTTGGGCCCCTGCCCAGCCTGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | CAGGCAGGTCAGGGAGGTTCATGGAACAGCCTAGGAGCCAAGGCCTaGGGTCTCCTGGGACTGGGCTTGACCTGGCAGGCAGGGCACAGC | + |
Preference number: 1 (lower is better) Translates to: QAGQGGSWNSLGAKA*GLLGLGLTWQAGHS Trigger: GCTGTGCCCTGCCTGCCAGGTCAAGCCCAGTCCCAGGAGACCCCAGGCCTTGGCTCCTAGGCTGTTCCATGAACCTCCCTGACCTGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 90 bp | AGCTGCATTTGTGGCTTCAGCTCACCCCTGGGAGGGGAGCTATGCTaGCCAAGACTGGCCGGTTGCCCTGGGCGGCAGCTAGGGTACCAG | + |
Preference number: 1 (lower is better) Translates to: SCICGFSSPLGGELC*PRLAGCPGRQLGYQ Trigger: CTGGTACCCTAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGGGCAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGCCACAAATGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 90 bp | GTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATaGTGGCTTGTCTTCACCTTCAGCTCTTGGGCTGAGCTGGGGTGC | + |
Preference number: 1 (lower is better) Translates to: VSGQRGGHHGRPVVS*WLVFTFSSWAELGC Trigger: GCACCCCAGCTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 90 bp | TTCAGCTGCATTTGTGGCTTCAGCTCACCCCTGGGAGGGGAGCTATaGTGCCCAAGACTGGCCGGTTGCCCTGGGCGGCAGCTAGGGTAC | + |
Preference number: 1 (lower is better) Translates to: FSCICGFSSPLGGEL*CPRLAGCPGRQLGY Trigger: GTACCCTAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGGGCAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGCCACAAATGCAGCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | GGCAGACCCGTGGTTTCATGCTGGCTTGTCTTCACCTTCAGCTCTTaGGCTGAGCTGGGGTGCTGCCCCCTGCCAGGCACCTCCTCTCTG | + |
Preference number: 1 (lower is better) Translates to: GRPVVSCWLVFTFSS*AELGCCPLPGTSSL Trigger: CAGAGAGGAGGTGCCTGGCAGGGGGCAGCACCCCAGCTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCACGGGTCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 90 bp | ACCCGTGGTTTCATGCTGGCTTGTCTTCACCTTCAGCTCTTGGGCTaGGCTGGGGTGCTGCCCCCTGCCAGGCACCTCCTCTCTGTAATC | + |
Preference number: 1 (lower is better) Translates to: TRGFMLACLHLQLLG*AGVLPPARHLLSVI Trigger: GATTACAGAGAGGAGGTGCCTGGCAGGGGGCAGCACCCCAGCTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCACGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 90 bp | AGCCCTGGACACTGGAGCAGAATGAGGAAGCCAGATCGTGTTCTGTaGTGGTCTGAGAGTGTAGAGGGTGAGGCCAATGGGGCTGGGGGC | + |
Preference number: 1 (lower is better) Translates to: SPGHWSRMRKPDRVL*WSESVEGEANGAGG Trigger: GCCCCCAGCCCCATTGGCCTCACCCTCTACACTCTCAGACCATCACAGAACACGATCTGGCTTCCTCATTCTGCTCCAGTGTCCAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 90 bp | CCATGGCTGAGTCACGGAGCTGAGCTCTGCTCTTCTTCACTGGTATaGATCACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGC | + |
Preference number: 1 (lower is better) Translates to: PWLSHGAELCSSSLV*ITGGQEVPGCQVCC Trigger: GCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGTGATTCATACCAGTGAAGAAGAGCAGAGCTCAGCTCCGTGACTCAGCCATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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3UTR CCA 90 bp | GACCAGGGCAGACAGATGAGGGGTAGGCGGCAGGTGGGAGCCCTATaGGAAAGGGGCTTCTTGATGTTCAGTCCATGTAGCATGGTTGTG | + |
Preference number: 1 (lower is better) Translates to: DQGRQMRGRRQVGAL*ERGFLMFSPCSMVV Trigger: CACAACCATGCTACATGGACTGAACATCAAGAAGCCCCTTTCCCATAGGGCTCCCACCTGCCGCCTACCCCTCATCTGTCTGCCCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 90 bp | GCTGGATCTGCTGTGTCTGCAGGAGTGGGCTGCATCCCCGGAAGTTaGGGTTCCCTCAGCATCTCTGCTTTAGCATCTGCCCTAGGATGT | + |
Preference number: 1 (lower is better) Translates to: AGSAVSAGVGCIPGS*GSLSISALASALGC Trigger: ACATCCTAGGGCAGATGCTAAAGCAGAGATGCTGAGGGAACCTCAACTTCCGGGGATGCAGCCCACTCCTGCAGACACAGCAGATCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | TGGTTTCATGCTGGCTTGTCTTCACCTTCAGCTCTTGGGCTGAGCTaGGGTGCTGCCCCCTGCCAGGCACCTCCTCTCTGTAATCTTGTT | + |
Preference number: 1 (lower is better) Translates to: WFHAGLSSPSALGLS*GAAPCQAPPLCNLV Trigger: AACAAGATTACAGAGAGGAGGTGCCTGGCAGGGGGCAGCACCCCAGCTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | GGGGGCTGGCAGGGGCACAGGGTGGAGGATCTGTCAGAACATCAGTaGAATTGGTCTCAGAACACCAATAGACCAGGCAGATGGAGGAAC | + |
Preference number: 1 (lower is better) Translates to: GGWQGHRVEDLSEHQ*NWSQNTNRPGRWRN Trigger: GTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTGCCCCTGCCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 90 bp | TCTGCTCTTCTTCACTGGTATGAATCACTGCTGGGGGCCAGGAGGTaGCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTGGCTTCA | + |
Preference number: 1 (lower is better) Translates to: SALLHWYESLLGARR*QDVRSAASAAFVAS Trigger: TGAAGCCACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGCAGTGATTCATACCAGTGAAGAAGAGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
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3UTR CCA 90 bp | AACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGGTGCTaGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTC | + |
Preference number: 1 (lower is better) Translates to: NPCRQLQEKRGWCWC*WCGDALSRHGSKDF Trigger: GAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | TCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTaGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAA | + |
Preference number: 1 (lower is better) Translates to: SWNPCRQLQEKRGWC*CWWCGDALSRHGSK Trigger: TTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | AAAGTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATaGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGC | + |
Preference number: 1 (lower is better) Translates to: KVSWNPCRQLQEKRG*CWCWWCGDALSRHG Trigger: GCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | TGGCAGGGGCACAGGGTGGAGGATCTGTCAGAACATCAGTGGAATTaGTCTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAAC | + |
Preference number: 1 (lower is better) Translates to: WQGHRVEDLSEHQWN*SQNTNRPGRWRNRN Trigger: GTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTGCCCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 90 bp | CCCCCTGCCAGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTaGAAGTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAG | + |
Preference number: 1 (lower is better) Translates to: PPARHLLSVILFSLP*KCLGTHVGSFRRRE Trigger: CTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCTGGCAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 90 bp | GCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTGAAAGTGTCTTaGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGG | + |
Preference number: 1 (lower is better) Translates to: APPLCNLVFSALKVS*NPCRQLQEKRGWCW Trigger: CCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 90 bp | GGTTTTGGTGCCTACTTTTTGTTGCCTTTCAGACACTTGGTTTCTTaGTTACCCAAAGAGCCCTGGACACTGGAGCAGAATGAGGAAGCC | + |
Preference number: 1 (lower is better) Translates to: GFGAYFLLPFRHLVS*LPKEPWTLEQNEEA Trigger: GGCTTCCTCATTCTGCTCCAGTGTCCAGGGCTCTTTGGGTAATCAAGAAACCAAGTGTCTGAAAGGCAACAAAAAGTAGGCACCAAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 90 bp | TGGAACAGCCTAGGAGCCAAGGCCTGGGGTCTCCTGGGACTGGGCTaGACCTGGCAGGCAGGGCACAGCAGGAAAGATCAGGCTGGGCAG | + |
Preference number: 2 (lower is better) Translates to: WNSLGAKAWGLLGLG*TWQAGHSRKDQAGQ Trigger: CTGCCCAGCCTGATCTTTCCTGCTGTGCCCTGCCTGCCAGGTCAAGCCCAGTCCCAGGAGACCCCAGGCCTTGGCTCCTAGGCTGTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTTCCGCCTGCCATGGCTaGGTCACGGAGCTGAGCTCT | + |
Preference number: 2 (lower is better) Translates to: RPAGRASWQTRGFMLACLSACHG*VTELSS Trigger: AGAGCTCAGCTCCGTGACTCAGCCATGGCAGGCGGA...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | AGCCTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGCTTCAGCTCTTGGGCTaGGCTGGGGTGCTGCCCCCT | + |
Preference number: 2 (lower is better) Translates to: SLKAPARVWSGSQRPCSELQLLG*AGVLPP Trigger: AGGGGGCAGCACCCCAGCTCAGCCCAAGAGCTGAAG...CTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | GCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGCTTGGGGTGCTGCCCCCTaGCAGGCACCTCCTCTCTGT | + |
Preference number: 2 (lower is better) Translates to: AMQRAGLCAKRTKGTDPAWGAAP*QAPPLC Trigger: ACAGAGAGGAGGTGCCTGGCAGGGGGCAGCACCCCA...AGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | CTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGCTGGCAAAAGCCACAGGCTaGGTGTGGCAGGCGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: LKAPARVWSGSQRPCSELAKATG*VWQAGW Trigger: CCAGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGC...CAGCTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTGCTTCAGCTCACCCCTaGGAGGGGAGCTATGCTGCC | + |
Preference number: 2 (lower is better) Translates to: RPAGRASWQTRGFMLACLASAHP*EGSYAA Trigger: GGCAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGC...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTGGTATGAATCACTGCTaGGGGCCAGGAGGTGCCAGG | + |
Preference number: 2 (lower is better) Translates to: ERPAGRASWQTRGFMLACGMNHC*GPGGAR Trigger: CCTGGCACCTCCTGGCCCCCAGCAGTGATTCATACC...ACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
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3UTR-3UTR TCA 90 bp | CAGGACCAGGGCAGACAGATGAGGGGTAGGCGGCAGGTGGGAGCCCTATGGGAAGGCCAGGTCAGTGGGTaGGTAGATGTCTGGCTGGAC | + |
Preference number: 2 (lower is better) Translates to: QDQGRQMRGRRQVGALWEGQVSG*VDVWLD Trigger: GTCCAGCCAGACATCTACTCACCCACTGACCTGGCC...TTCCCATAGGGCTCCCACCTGCCGCCTACCCCTCATCTGTCTGCCCTGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTGACAGGGCATCCCTTTaGGAGTCAGCCCCAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: ERPAGRASWQTRGFMLACDRASL*ESAPAQ Trigger: TTGAGCTGGGGCTGACTCCCAAAGGGATGCCCTGTC...ACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | AATGGCAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGCTTCAGCTGCATTTGTaGCTTCAGCTCACCCCTGGG | + |
Preference number: 2 (lower is better) Translates to: NGRQLVSGQRGGHHGRPVLQLHL*LQLTPG Trigger: CCCAGGGGTGAGCTGAAGCCACAAATGCAGCTGAAG...CACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTGCCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | GCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTTGCCTCGGCTGGGTGTaGGGACTCAGCCCCTCGGGG | + |
Preference number: 2 (lower is better) Translates to: AGAGGVVMPFPDMAAKTSCLGWV*GLSPSG Trigger: CCCCGAGGGGCTGAGTCCTCACACCCAGCCGAGGCA...AGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | AGCCTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGGTTGTGTGGCAGTTGTaGGTCAGGCCAGGTCAGTGG | + |
Preference number: 2 (lower is better) Translates to: SLKAPARVWSGSQRPCSEVVWQL*VRPGQW Trigger: CCACTGACCTGGCCTGACTCACAACTGCCACACAAC...CTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGAGGGCAAAAGCCACAGGCTaGGTGTGGCAGGCGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: ADTSSYQHKVIGAGAWLRAKATG*VWQAGW Trigger: CCAGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGC...CCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGCTACTGGTATGAATCACTaGGGGCCAGGAGGTGCCAGG | + |
Preference number: 2 (lower is better) Translates to: AMQRAGLCAKRTKGTDPATGMNH*GPGGAR Trigger: CCTGGCACCTCCTGGCCCCCAGTGATTCATACCAGT...AGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGCCTCGGCTGGGTGTaGGGACTCAGCCCCTCGGGG | + |
Preference number: 2 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNCLGWV*GLSPSG Trigger: CCCCGAGGGGCTGAGTCCTCACACCCAGCCGAGGCA...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | AAGGCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGACAGGGCATCCCTTTaGGAGTCAGCCCCAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: KAMQRAGLCAKRTKGTDPDRASL*ESAPAQ Trigger: TTGAGCTGGGGCTGACTCCCAAAGGGATGCCCTGTC...AGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGCTGGTGTCATTCTCCTaGCTCTGTAGGCTCCAGCCG | + |
Preference number: 2 (lower is better) Translates to: EISRVSLVPRAYLHTLCQLVSFS*LCRLQP Trigger: CGGCTGGAGCCTACAGAGCCAGGAGAATGACACCAG...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | AAGGCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTTTCACCTTCAGCTCTTaGGCTGAGCTGGGGTGCTGC | + |
Preference number: 2 (lower is better) Translates to: KAMQRAGLCAKRTKGTDPFTFSS*AELGCC Trigger: GCAGCACCCCAGCTCAGCCCAAGAGCTGAAGGTGAA...AGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 90 bp | TGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTaGGCTGAGGTTTCAGCTGGGCAATCACCAGGCAGGTCAGGGAGG | + |
Preference number: 2 (lower is better) Translates to: CRHKQLPAQGNWSWG*AEVSAGQSPGRSGR Trigger: CCTCCCTGACCTGCCTGGTGATTGCCCAGCTGAAACCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGGGCCAGGTCAGTGGGTaGGTAGATGTCTGGCTGGAC | + |
Preference number: 2 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQGQVSG*VDVWLD Trigger: GTCCAGCCAGACATCTACTCACCCACTGACCTGGCC...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | TGGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACACTGGTATGAATCACTaGTGGGGGCCAGGAGGTGCC | + |
Preference number: 2 (lower is better) Translates to: WCWCWWCGDALSRHGSKDTGMNH*WGPGGA Trigger: GGCACCTCCTGGCCCCCAGCAGTGATTCATACCAGT...GTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
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3UTR-3UTR GCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGGGTGCTGCCCCCTaGCAGGCACCTCCTCTCTGT | + |
Preference number: 2 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNWGAAP*QAPPLC Trigger: ACAGAGAGGAGGTGCCTGGCAGGGGGCAGCACCCCA...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | CTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGCTGAGACCCGTGGTTTCATaGTGGCTTGTCTTCACCTTC | + |
Preference number: 2 (lower is better) Translates to: LKAPARVWSGSQRPCSELRPVVS*WLVFTF Trigger: GAAGGTGAAGACAAGCCAGCATGAAACCACGGGTCT...CAGCTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | CTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGACCCTCCGCCTGCCATaGCTGAGTCACGGAGCTGAG | + |
Preference number: 2 (lower is better) Translates to: LRTPIDQADGGTATRPTQTLRLP*LSHGAE Trigger: CTCAGCTCCGTGACTCAGCCATGGCAGGCGGAGGGT...CTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CCA 90 bp | CAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGGCACCCTCCGCCTGCCATaGCTGAGTCACGGAGCTGAG | + |
Preference number: 2 (lower is better) Translates to: QRLLSSLETWCHSPGSVGTLRLP*LSHGAE Trigger: CTCAGCTCCGTGACTCAGCCATGGCAGGCGGAGGGT...GCCTACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR CAA 90 bp | AGCTGGATCTGCTGTGTCTGCAGGAGTGGGCTGCATCCCCGGAAGTaGAGGTTCCCTCAGCATCTCTGCTTTAGCATCTGCCCTAGGATG | + |
Preference number: 2 (lower is better) Translates to: SWICCVCRSGLHPRK*RFPQHLCFSICPRM Trigger: CATCCTAGGGCAGATGCTAAAGCAGAGATGCTGAGGGAACCTCAACTTCCGGGGATGCAGCCCACTCCTGCAGACACAGCAGATCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR TCA 90 bp | ACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGGTTGTGTGGCAGTTGTaGGTCAGGCCAGGTCAGTGG | + |
Preference number: 2 (lower is better) Translates to: TADTSSYQHKVIGAGAWLVVWQL*VRPGQW Trigger: CCACTGACCTGGCCTGACTCACAACTGCCACACAAC...CAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CCA 90 bp | GCTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTTTACCCAAAGAGCCCTaGACACTGGAGCAGAATGAG | + |
Preference number: 2 (lower is better) Translates to: AGGQEVPGCQVCCFSCICLPKEP*TLEQNE Trigger: CTCATTCTGCTCCAGTGTCCAGGGCTCTTTGGGTAA...ACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
||
3UTR-3UTR CCA 90 bp | AAGGCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTTGCCCTTTCCAGACATaGCAGCAAAGACTTCTCAGC | + |
Preference number: 2 (lower is better) Translates to: KAMQRAGLCAKRTKGTDPCPFQT*QQRLLS Trigger: GCTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCA...AGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCGCTCTTGGGCTGAGCTaGGGTGCTGCCCCCTGCCAG | + |
Preference number: 2 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGALGLS*GAAPCQ Trigger: CTGGCAGGGGGCAGCACCCCAGCTCAGCCCAAGAGC...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR TCA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGTGCATCCCCGGAAGTTaGGGTTCCCTCAGCATCTCT | + |
Preference number: 2 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQCIPGS*GSLSIS Trigger: AGAGATGCTGAGGGAACCTCAACTTCCGGGGATGCA...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR TCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCCTTCAGCTCTTGGGCTaGGCTGGGGTGCTGCCCCCT | + |
Preference number: 2 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGLQLLG*AGVLPP Trigger: AGGGGGCAGCACCCCAGCTCAGCCCAAGAGCTGAAG...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR TCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCTCCTGGGACTGGGCTTaGCCTGGCAGGCAGGGCACA | + |
Preference number: 2 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGSWDWA*PGRQGT Trigger: TGTGCCCTGCCTGCCAGGTCAAGCCCAGTCCCAGGA...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR GCA 90 bp | GAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTGTGCCTACTTTTTGTTaGCTTTCAGACACTTGGTTT | + |
Preference number: 2 (lower is better) Translates to: ERPAGRASWQTRGFMLACVPTFC*LSDTWF Trigger: AAACCAAGTGTCTGAAAGGCAACAAAAAGTAGGCAC...ACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR GCA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTTGGATCTGCTGTGTCTaGAGGAGTGGGCTGCATCCC | + |
Preference number: 2 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGWICCV*RSGLHP Trigger: GGGATGCAGCCCACTCCTGCAGACACAGCAGATCCA...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CCA 90 bp | CTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGCTGGTGTCATTCTCCTaGCTCTGTAGGCTCCAGCCG | + |
Preference number: 2 (lower is better) Translates to: LRTPIDQADGGTATRPTQLVSFS*LCRLQP Trigger: CGGCTGGAGCCTACAGAGCCAGGAGAATGACACCAG...CTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CCA 90 bp | CTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGATTGGAGCTGGGGCTTaGCTGAGGTTTCAGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: LRTPIDQADGGTATRPTQIGAGA*LRFQLG Trigger: GCCCAGCTGAAACCTCAGCCAAGCCCCAGCTCCAAT...CTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR TCA 90 bp | GTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGGTGCACTTCTCAGCAGCCTTaGGACCTGGTGTCATTCTCC | + |
Preference number: 2 (lower is better) Translates to: VSWNPCRQLQEKRGWCWCTSQQP*DLVSFS Trigger: GGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGT...GCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | AGCCTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGTTGTTTTCTCTGCCTTaGAAGTGTCTTGGAACCCAT | + |
Preference number: 2 (lower is better) Translates to: SLKAPARVWSGSQRPCSELFSLP*KCLGTH Trigger: ATGGGTTCCAAGACACTTTCAAGGCAGAGAAAACAA...CTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR GCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTGTGCCTACTTTTTGTTaGCTTTCAGACACTTGGTTT | + |
Preference number: 2 (lower is better) Translates to: RPAGRASWQTRGFMLACLVPTFC*LSDTWF Trigger: AAACCAAGTGTCTGAAAGGCAACAAAAAGTAGGCAC...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGAGGTTACCCAAAGAGCCCTaGACACTGGAGCAGAATGAG | + |
Preference number: 2 (lower is better) Translates to: ADTSSYQHKVIGAGAWLRLPKEP*TLEQNE Trigger: CTCATTCTGCTCCAGTGTCCAGGGCTCTTTGGGTAA...CCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATGGATGGTGCTGGTGCTaGTGGTGTGGTGATGCCCTT | + |
Preference number: 2 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNGWCWC*WCGDAL Trigger: AAGGGCATCACCACACCACCAGCACCAGCACCATCC...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GGTCTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGGAGAAGAGAGGATaGTGCTGGTGCTGGTGGTGT | + |
Preference number: 2 (lower is better) Translates to: GLRTPIDQADGGTATRPTQEKRG*CWCWWC Trigger: ACACCACCAGCACCAGCACCATCCTCTCTTCTCCTG...AGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAGACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGGGGTCATGGCTTTTGTaGAAAAATAAACTTGTGGGG | + |
Preference number: 2 (lower is better) Translates to: EISRVSLVPRAYLHTLCQGSWLL*KNKLVG Trigger: CCCCACAAGTTTATTTTTGCACAAAAGCCATGACCC...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | CAGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTGAAAGTGTCTTGGAACGCTTCAGCTCACCCCTaGGAGGGGAGCTATGCTGCC | + |
Preference number: 2 (lower is better) Translates to: QAPPLCNLVFSALKVSWNASAHP*EGSYAA Trigger: GGCAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGC...GTTCCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | CCTACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCAGGCAGGGGCACAGGGTaGAGGATCTGTCAGAACATC | + |
Preference number: 2 (lower is better) Translates to: PTYTPYASQMSMGHGFCAGRGTG*RICQNI Trigger: GATGTTCTGACAGATCCTCCACCCTGTGCCCCTGCC...TGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | AACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGTGCATCCCCGGAAGTTaGGGTTCCCTCAGCATCTCT | + |
Preference number: 2 (lower is better) Translates to: NKAYSDCRHKQLPAQGNWCIPGS*GSLSIS Trigger: AGAGATGCTGAGGGAACCTCAACTTCCGGGGATGCA...CCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | AAGGCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTTGCCTTTCAGACACTTaGTTTCTTGATTACCCAAAG | + |
Preference number: 2 (lower is better) Translates to: KAMQRAGLCAKRTKGTDPCLSDT*FLDYPK Trigger: CTTTGGGTAATCAAGAAACCAAGTGTCTGAAAGGCA...AGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | AACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGCTTCAGCTGCATTTGTaGCTTCAGCTCACCCCTGGG | + |
Preference number: 2 (lower is better) Translates to: NKAYSDCRHKQLPAQGNWLQLHL*LQLTPG Trigger: CCCAGGGGTGAGCTGAAGCCACAAATGCAGCTGAAG...CCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 90 bp | GAGGTAAGATGGTATGGGCAGACAGCCTGGCTGGATATTCAAGGCTaGGTGAAAATAGGGGATAGCCACACTCTCTTGAGATCTCCAGGG | + |
Preference number: 2 (lower is better) Translates to: EVRWYGQTAWLDIQG*VKIGDSHTLLRSPG Trigger: CCCTGGAGATCTCAAGAGAGTGTGGCTATCCCCTATTTTCACCAAGCCTTGAATATCCAGCCAGGCTGTCTGCCCATACCATCTTACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | AACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGACTTCTCAGCAGCCTTaGGACCTGGTGTCATTCTCC | + |
Preference number: 2 (lower is better) Translates to: NKAYSDCRHKQLPAQGNWTSQQP*DLVSFS Trigger: GGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGT...CCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | CAGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTGAAAGTGTCTTGGAACTGGATCTGCTGTGTCTaGAGGAGTGGGCTGCATCCC | + |
Preference number: 2 (lower is better) Translates to: QAPPLCNLVFSALKVSWNWICCV*RSGLHP Trigger: GGGATGCAGCCCACTCCTGCAGACACAGCAGATCCA...GTTCCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATCCAGGATGTCAGGTCTaGTGCTTCAGCTGCATTTGT | + |
Preference number: 2 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNPGCQV*CFSCIC Trigger: ACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGG...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCGAGAAGAGAGGATGGTaGTGGTGCTGGTGGTGTGGT | + |
Preference number: 2 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGEKRGW*WCWWCG Trigger: ACCACACCACCAGCACCAGCACCATCCTCTCTTCTC...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | ACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCAAAAGGATGGTGCTGGTGCTaGTGGTGTGGTGATGCCCTT | + |
Preference number: 2 (lower is better) Translates to: TYTPYASQMSMGHGFCAKGWCWC*WCGDAL Trigger: AAGGGCATCACCACACCACCAGCACCAGCACCATCC...TTTTGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | CACAGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATGGGAAAGGGGCTTCTTaGTGTTCAGTCCATGTAGCA | + |
Preference number: 2 (lower is better) Translates to: HRVEDLSEHQWNWSQNTNGKGAS*CSVHVA Trigger: TGCTACATGGACTGAACATCAAGAAGCCCCTTTCCC...ATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR GCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCAAGGCCTACTCAGACTaGAGACACAAGCAGCTACCA | + |
Preference number: 2 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGKAYSD*RHKQLP Trigger: TGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTT...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | ACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCAAAAAAGAGCCCTGGACACTaGAGCAGAATGAGGAAGCCA | + |
Preference number: 2 (lower is better) Translates to: TYTPYASQMSMGHGFCAKKSPGH*SRMRKP Trigger: TGGCTTCCTCATTCTGCTCCAGTGTCCAGGGCTCTT...TTTTGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CCA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGTGCCTTTCAGACACTTaGTTTCTTGATTACCCAAAG | + |
Preference number: 2 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQCLSDT*FLDYPK Trigger: CTTTGGGTAATCAAGAAACCAAGTGTCTGAAAGGCA...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR TCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTTGTTTTCTCTGCCTTaGAAGTGTCTTGGAACCCAT | + |
Preference number: 2 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNLFSLP*KCLGTH Trigger: ATGGGTTCCAAGACACTTTCAAGGCAGAGAAAACAA...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | GGCAGGGGCCCAAGCCTTAAGGCTCCTGCAAGGGTCTaGTCGGGGAGCCAAAGGCCATGCAGCGAGCTGGGC | + |
Preference number: 3 (lower is better) Translates to: GRGPSLKAPARV*SGSQRPCSELG Trigger: GCCCAGCTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAGGCTTGGGCCCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | CTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGCTGCCCAAGACTGGCCGGTaGCCCTGGGCGGCAGCTAGG | + |
Preference number: 3 (lower is better) Translates to: LKAPARVWSGSQRPCSELPKTGR*PWAAAR Trigger: CCTAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGGG...CAGCTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 72 bp | TGTGGCTTCAGCTCACCCCTGGGAGGGGAGCTATGCTaGCCAAGACTGGCCGGTTGCCCTGGGCGGCAGCTA | + |
Preference number: 3 (lower is better) Translates to: CGFSSPLGGELC*PRLAGCPGRQL Trigger: TAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGGGCAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGCCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 72 bp | ATTTGTGGCTTCAGCTCACCCCTGGGAGGGGAGCTATaGTGCCCAAGACTGGCCGGTTGCCCTGGGCGGCAG | + |
Preference number: 3 (lower is better) Translates to: ICGFSSPLGGEL*CPRLAGCPGRQ Trigger: CTGCCGCCCAGGGCAACCGGCCAGTCTTGGGCAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGCCACAAAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | ATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGCCACTCCTGGGACTGGGCTaGACCTGGCAGGCAGGGCAC | + |
Preference number: 3 (lower is better) Translates to: ISRVSLVPRAYLHTLCQPLLGLG*TWQAGH Trigger: GTGCCCTGCCTGCCAGGTCAAGCCCAGTCCCAGGAG...TGGCTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 72 bp | CGGGGAGCCAAAGGCCATGCAGCGAGCTGGGCTCTGTaGCAAGAGGACCAAGGGTACAGACCCTGCTCAAGC | + |
Preference number: 3 (lower is better) Translates to: RGAKGHAASWAL*QEDQGYRPCSS Trigger: GCTTGAGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTTTGGCTCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | GCTGGCTTGTCTTCACCTTCAGCTCTTGGGCTGAGCTaGGGTGCTGCCCCCTGCCAGGCACCTCCTCTCTGT | + |
Preference number: 3 (lower is better) Translates to: AGLSSPSALGLS*GAAPCQAPPLC Trigger: ACAGAGAGGAGGTGCCTGGCAGGGGGCAGCACCCCAGCTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | CAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATaGCAGACCCGTGGTTTCATGCTGGCTTGTCTTCAC | + |
Preference number: 3 (lower is better) Translates to: QAASERPAGRAS*QTRGFMLACLH Trigger: GTGAAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR CCA 72 bp | CAGGGAGGTTCATGGAACAGCCTAGGAGCCAAGGCCTaGGGTCTCCTGGGACTGGGCTTGACCTGGCAGGCA | + |
Preference number: 3 (lower is better) Translates to: QGGSWNSLGAKA*GLLGLGLTWQA Trigger: TGCCTGCCAGGTCAAGCCCAGTCCCAGGAGACCCCAGGCCTTGGCTCCTAGGCTGTTCCATGAACCTCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CAA 90 bp | GCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGAGGCCCAAGACTGGCCGGTaGCCCTGGGCGGCAGCTAGG | + |
Preference number: 3 (lower is better) Translates to: ADTSSYQHKVIGAGAWLRPKTGR*PWAAAR Trigger: CCTAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGGG...CCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR GCA 72 bp | CAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTaGATTTGTGGCTTCAGCTCACCCCTGGGAGGGGAG | + |
Preference number: 3 (lower is better) Translates to: QEVPGCQVCCFS*ICGFSSPLGGE Trigger: CTCCCCTCCCAGGGGTGAGCTGAAGCCACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 72 bp | CAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATaGTGGCTTGTCTTCACCTTCAGCTCTTGGGCTGAG | + |
Preference number: 3 (lower is better) Translates to: QRGGHHGRPVVS*WLVFTFSSWAE Trigger: CTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR CCA 72 bp | ATCCCTTTGGGAGTCAGCCCCAGCTCAAGTCCTAGTTaGCAAAAGCCACAGGCTGGGTGTGGCAGGCGGGCT | + |
Preference number: 3 (lower is better) Translates to: IPLGVSPSSSPS*QKPQAGCGRRA Trigger: AGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGCCAACTAGGACTTGAGCTGGGGCTGACTCCCAAAGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR CCA 72 bp | CTAGGGTACCAGCTGGATCTGCTGTGTCTGCAGGAGTaGGCTGCATCCCCGGAAGTTGAGGTTCCCTCAGCA | + |
Preference number: 3 (lower is better) Translates to: LGYQLDLLCLQE*AASPEVEVPSA Trigger: TGCTGAGGGAACCTCAACTTCCGGGGATGCAGCCCACTCCTGCAGACACAGCAGATCCAGCTGGTACCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | GCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTaGCTTCAGCTCACCCCTGGGAGGGGAGCTATGCTG | + |
Preference number: 3 (lower is better) Translates to: ARMSGLLLQLHL*LQLTPGRGAML Trigger: CAGCATAGCTCCCCTCCCAGGGGTGAGCTGAAGCCACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CAA 90 bp | ACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTCTGCATCCCCGGAAGTaGAGGTTCCCTCAGCATCTC | + |
Preference number: 3 (lower is better) Translates to: TGGQEVPGCQVCCFSCICLHPRK*RFPQHL Trigger: GAGATGCTGAGGGAACCTCAACTTCCGGGGATGCAG...ACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
||
3UTR-3UTR CAA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTGGACAGGGCATCCCTTaGGGAGTCAGCCCCAGCTCA | + |
Preference number: 3 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGGQGIP*GVSPSS Trigger: TGAGCTGGGGCTGACTCCCAAAGGGATGCCCTGTCC...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CAA 90 bp | GAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTGGTGCCTACTTTTTGTaGCCTTTCAGACACTTGGTT | + |
Preference number: 3 (lower is better) Translates to: ERPAGRASWQTRGFMLACGAYFL*PFRHLV Trigger: AACCAAGTGTCTGAAAGGCAACAAAAAGTAGGCACC...ACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | CAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGGACAGGGCATCCCTTaGGGAGTCAGCCCCAGCTCA | + |
Preference number: 3 (lower is better) Translates to: QQRLLSSLETWCHSPGSVGQGIP*GVSPSS Trigger: TGAGCTGGGGCTGACTCCCAAAGGGATGCCCTGTCC...TACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
3UTR-3UTR CAA 90 bp | ATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGCCATGGGAAAGGGGCTTCTaGATGTTCAGTCCATGTAGC | + |
Preference number: 3 (lower is better) Translates to: ISRVSLVPRAYLHTLCQPWERGF*MFSPCS Trigger: GCTACATGGACTGAACATCAAGAAGCCCCTTTCCCA...TGGCTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 72 bp | GGCGGCAGGTGGGAGCCCTATGGGAAAGGGGCTTCTTaGTGTTCAGTCCATGTAGCATGGTTGTGTGGCAGT | + |
Preference number: 3 (lower is better) Translates to: GGRWEPYGKGAS*CSVHVAWLCGS Trigger: ACTGCCACACAACCATGCTACATGGACTGAACATCAAGAAGCCCCTTTCCCATAGGGCTCCCACCTGCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 72 bp | AGTCACGGAGCTGAGCTCTGCTCTTCTTCACTGGTATaGATCACTGCTGGGGGCCAGGAGGTGCCAGGATGT | + |
Preference number: 3 (lower is better) Translates to: SHGAELCSSSLV*ITAGGQEVPGC Trigger: ACATCCTGGCACCTCCTGGCCCCCAGCAGTGATTCATACCAGTGAAGAAGAGCAGAGCTCAGCTCCGTGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
||
3UTR CCA 72 bp | ACATGGCAGCAAAGACTTCTCAGCAGCCTTGAGACCTaGTGTCATTCTCCTGGCTCTGTAGGCTCCAGCCGC | + |
Preference number: 3 (lower is better) Translates to: TWQQRLLSSLET*CHSPGSVGSSR Trigger: GCGGCTGGAGCCTACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTGCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | GCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCTGCTTCAGCTGCATTaGTGGCTTCAGCTCACCCCT | + |
Preference number: 3 (lower is better) Translates to: AGAGGVVMPFPDMAAKTSLLQLH*WLQLTP Trigger: AGGGGTGAGCTGAAGCCACAAATGCAGCTGAAGCAG...AGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGTGGTTTCATGCTGGCTaGTCTTCACCTTCAGCTCTT | + |
Preference number: 3 (lower is better) Translates to: EISRVSLVPRAYLHTLCQWFHAG*SSPSAL Trigger: AAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCA...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | CTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGAATTGGAGCTGGGGCTaGGCTGAGGTTTCAGCTGGG | + |
Preference number: 3 (lower is better) Translates to: LRTPIDQADGGTATRPTQNWSWG*AEVSAG Trigger: CCCAGCTGAAACCTCAGCCAAGCCCCAGCTCCAATT...CTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 72 bp | GTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATaGCAGCCAAATGAGTATGGGTCATGGCTTTTGTGC | + |
Preference number: 3 (lower is better) Translates to: VSLVPRAYLHTL*QPNEYGSWLLC Trigger: GCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | GACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTaGAGCTGGGGCTTGGCTGAGGTTTCAGCTGGGCAA | + |
Preference number: 3 (lower is better) Translates to: DCRHKQLPAQGN*SWGLAEVSAGQ Trigger: TTGCCCAGCTGAAACCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 72 bp | CACTGGAGCAGAATGAGGAAGCCAGATCGTGTTCTGTaGTGGTCTGAGAGTGTAGAGGGTGAGGCCAATGGG | + |
Preference number: 3 (lower is better) Translates to: HWSRMRKPDRVL*WSESVEGEANG Trigger: CCCATTGGCCTCACCCTCTACACTCTCAGACCATCACAGAACACGATCTGGCTTCCTCATTCTGCTCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR GCA 72 bp | GGCAGATGGAGGAACCGCAACAAGGCCTACTCAGACTaGAGACACAAGCAGCTACCAGCACAAGGTAATTGG | + |
Preference number: 3 (lower is better) Translates to: GRWRNRNKAYSD*RHKQLPAQGNW Trigger: CCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | AGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTaGGGCTTGGCTGAGGTTTCAGCTGGGCAATCACCA | + |
Preference number: 3 (lower is better) Translates to: RHKQLPAQGNWS*GLAEVSAGQSP Trigger: TGGTGATTGCCCAGCTGAAACCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | CAGGGGCACAGGGTGGAGGATCTGTCAGAACATCAGTaGAATTGGTCTCAGAACACCAATAGACCAGGCAGA | + |
Preference number: 3 (lower is better) Translates to: QGHRVEDLSEHQ*NWSQNTNRPGR Trigger: TCTGCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTTGGGAAAGGGGCTTCTaGATGTTCAGTCCATGTAGC | + |
Preference number: 3 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGWERGF*MFSPCS Trigger: GCTACATGGACTGAACATCAAGAAGCCCCTTTCCCA...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | AGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACTGCATCCCCGGAAGTaGAGGTTCCCTCAGCATCTC | + |
Preference number: 3 (lower is better) Translates to: RVEDLSEHQWNWSQNTNRLHPRK*RFPQHL Trigger: GAGATGCTGAGGGAACCTCAACTTCCGGGGATGCAG...TCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGTATGGGTCATGGCTTTaGTGCAAAAATAAACTTGTG | + |
Preference number: 3 (lower is better) Translates to: EISRVSLVPRAYLHTLCQYGSWL*CKNKLV Trigger: CACAAGTTTATTTTTGCACAAAAGCCATGACCCATA...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 72 bp | ATGTTCAGTCCATGTAGCATGGTTGTGTGGCAGTTGTaGGTCAGGCCAGGTCAGTGGGTGAGTAGATGTCTG | + |
Preference number: 3 (lower is better) Translates to: MFSPCSMVVWQL*VRPGQWVSRCL Trigger: CAGACATCTACTCACCCACTGACCTGGCCTGACTCACAACTGCCACACAACCATGCTACATGGACTGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | TGGAATTGGTCTCAGAACACCAATAGACCAGGCAGATaGAGGAACCGCAACAAGGCCTACTCAGACTGCAGA | + |
Preference number: 3 (lower is better) Translates to: WNWSQNTNRPGR*RNRNKAYSDCR Trigger: TCTGCAGTCTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAGACCAATTCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | CACAGGGTGGAGGATCTGTCAGAACATCAGTGGAATTaGTCTCAGAACACCAATAGACCAGGCAGATGGAGG | + |
Preference number: 3 (lower is better) Translates to: HRVEDLSEHQWN*SQNTNRPGRWR Trigger: CCTCCATCTGCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGTTTGGTGCCTACTTTTaGTTGCCTTTCAGACACTTG | + |
Preference number: 3 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQFGAYF*LPFRHL Trigger: CAAGTGTCTGAAAGGCAACAAAAAGTAGGCACCAAA...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 72 bp | TTGATTACCCAAAGAGCCCTGGACACTGGAGCAGAATaGGGAAGCCAGATCGTGTTCTGTGATGGTCTGAGA | + |
Preference number: 3 (lower is better) Translates to: LITQRALDTGAE*GSQIVFCDGLR Trigger: TCTCAGACCATCACAGAACACGATCTGGCTTCCTCATTCTGCTCCAGTGTCCAGGGCTCTTTGGGTAATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR TCA 72 bp | AGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTaGAAGTGTCTTGGAACCCATGTAGGCAGCTTCAGG | + |
Preference number: 3 (lower is better) Translates to: RHLLSVILFSLP*KCLGTHVGSFR Trigger: CCTGAAGCTGCCTACATGGGTTCCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | CAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTATTTGGTGCCTACTTTTaGTTGCCTTTCAGACACTTG | + |
Preference number: 3 (lower is better) Translates to: QQRLLSSLETWCHSPGSVFGAYF*LPFRHL Trigger: CAAGTGTCTGAAAGGCAACAAAAAGTAGGCACCAAA...TACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR-3UTR CAA 90 bp | AGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACAGACACTTGGTTTCTaGATTACCCAAAGAGCCCTG | + |
Preference number: 3 (lower is better) Translates to: RVEDLSEHQWNWSQNTNRQTLGF*ITQRAL Trigger: CAGGGCTCTTTGGGTAATCAAGAAACCAAGTGTCTG...TCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | GTTTTGGTGCCTACTTTTTGTTGCCTTTCAGACACTTaGTTTCTTGATTACCCAAAGAGCCCTGGACACTGG | + |
Preference number: 3 (lower is better) Translates to: VLVPTFCCLSDT*FLDYPKSPGHW Trigger: CCAGTGTCCAGGGCTCTTTGGGTAATCAAGAAACCAAGTGTCTGAAAGGCAACAAAAAGTAGGCACCAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CCA 72 bp | ATCATATATAGATATATATCTGTCTTTGAGGTAAGATaGTATGGGCAGACAGCCTGGCTGGATATTCAAGGC | + |
Preference number: 3 (lower is better) Translates to: IIYRYISVFEVR*YGQTAWLDIQG Trigger: GCCTTGAATATCCAGCCAGGCTGTCTGCCCATACCATCTTACCTCAAAGACAGATATATATCTATATATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTCGTGCATCTCACGCTTaGCCCAGCGCTCCAGGTTGG | + |
Preference number: 4 (lower is better) Translates to: RPAGRASWQTRGFMLACLRASHA*PSAPGW Trigger: CCAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACG...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTCTGTGGGCAGTGGGGTaGCAGAAGGCTCAGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: RPAGRASWQTRGFMLACLLWAVG*QKAQLP Trigger: AGGCAGCTGAGCCTTCTGGCACCCCACTGCCCACAG...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTGGCGATGGTCTCCTaGCAGCGGCAAAGACAGGCC | + |
Preference number: 4 (lower is better) Translates to: SGQRGGHHGRPVVSCWLVLAMVS*QRQRQA Trigger: GGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAA...GACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGCTCCAGGTTGGCGATaGTCTCCTGGCAGCGGCAAA | + |
Preference number: 4 (lower is better) Translates to: VSGQRGGHHGRPVVSCWLAPGWR*SPGSGK Trigger: TTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGC...AAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AATGGCAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGCCAGCTCCCGCTGAATaGCTTCACGGGAGAGTGTAC | + |
Preference number: 4 (lower is better) Translates to: NGRQLVSGQRGGHHGRPVPAPAE*LHGRVY Trigger: GTACACTCTCCCGTGAAGCCATTCAGCGGGAGCTGG...CACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTGCCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTGCTGCTCCAGGGTCTTaGGGAGTGGGTGGCGCAGAA | + |
Preference number: 4 (lower is better) Translates to: RPAGRASWQTRGFMLACLAAPGS*GVGGAE Trigger: TTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGC...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | GCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGCTGGCGCAGAAAGCGCTTaGGTTTGGGCTGCAGGGTGC | + |
Preference number: 4 (lower is better) Translates to: AMQRAGLCAKRTKGTDPAGAESA*VWAAGC Trigger: GCACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCC...AGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGCTGCTGTGAGTCGCCGGTaGGCACGTAGCCGTCCAAGT | + |
Preference number: 4 (lower is better) Translates to: AMQRAGLCAKRTKGTDPAAVSRR*ARSRPS Trigger: ACTTGGACGGCTACGTGCCCACCGGCGACTCACAGC...AGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTCCAGCTCCCGCTGAATaGCTTCACGGGAGAGTGTAC | + |
Preference number: 4 (lower is better) Translates to: VSGQRGGHHGRPVVSCWLPAPAE*LHGRVY Trigger: GTACACTCTCCCGTGAAGCCATTCAGCGGGAGCTGG...AAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
CDS-3UTR CCA 90 bp | CAGGACCAGGGCAGACAGATGAGGGGTAGGCGGCAGGTGGGAGCCCTATGGGAACAGGGTCTTGGGGAGTaGGTGGCGCAGAAAGCGCTT | + |
Preference number: 4 (lower is better) Translates to: QDQGRQMRGRRQVGALWEQGLGE*VAQKAL Trigger: AAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTG...TTCCCATAGGGCTCCCACCTGCCGCCTACCCCTCATCTGTCTGCCCTGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | TGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTGGCTTCTTCCAGCGCTGTaGGTCGCCGGTGGGCACGTA | + |
Preference number: 4 (lower is better) Translates to: WGPGGARMSGLLLQLHLWLLPAL*VAGGHV Trigger: TACGTGCCCACCGGCGACTCACAGCGCTGGAAGAAG...CCACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | AATGGCAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTGCCCACCACATACTaGATGATCTCCTCCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: NGRQLVSGQRGGHHGRPVVPTTY*MISSSS Trigger: TGAGGAGGAGGAGATCATTCAGTATGTGGTGGGCAC...CACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTGCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGGCTGTGAGTCGCCGGTaGGCACGTAGCCGTCCAAGT | + |
Preference number: 4 (lower is better) Translates to: HWGPGGARMSGLLLQLHLAVSRR*ARSRPS Trigger: ACTTGGACGGCTACGTGCCCACCGGCGACTCACAGC...CAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CTTGAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCCCAGCGCTCCAGGTTaGCGATGGTCTCCTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LEISRVSLVPRAYLHTLCPSAPG*RWSPGS Trigger: GCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGG...GCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | ATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGCCAGGTATTTGCCGCCCATaGACTCCAGGCGGTCAGCCC | + |
Preference number: 4 (lower is better) Translates to: ISRVSLVPRAYLHTLCQPGICRP*TPGGQP Trigger: GGGCTGACCGCCTGGAGTCCATGGGCGGCAAATACC...TGGCTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | TGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTGGTTCTCCTGCGGCAGGTaGCGGGGTGATGGCATAGGG | + |
Preference number: 4 (lower is better) Translates to: WGPGGARMSGLLLQLHLWFSCGR*RGDGIG Trigger: CCCTATGCCATCACCCCGCCACCTGCCGCAGGAGAA...CCACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CCAAGACTGGCCGGTTGCCCTGGGCGGCAGCTAGGGTACCAGCTGGATCTGCTGGCTCAGGAACTCCCGTaGGTCCTCGAAGATCTGTGT | + |
Preference number: 4 (lower is better) Translates to: PRLAGCPGRQLGYQLDLLAQELP*VLEDLC Trigger: ACACAGATCTTCGAGGACCCACGGGAGTTCCTGAGC...CAGCAGATCCAGCTGGTACCCTAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AATGGCAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGACTCCCACCACTTCTTaGCTGGCCCATTCATGTGGT | + |
Preference number: 4 (lower is better) Translates to: NGRQLVSGQRGGHHGRPVTPTTS*LAHSCG Trigger: ACCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGT...CACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTGCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CCCAGCTCAAGTCCTAGTTGGCAAAAGCCACAGGCTGGGTGTGGCAGGCGGGCTATCCTCTGTGGGCAGTaGGGTGCCAGAAGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: PSSSPSWQKPQAGCGRRAILCGQ*GARRLS Trigger: GCTGAGCCTTCTGGCACCCCACTGCCCACAGAGGAT...AGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGCCAACTAGGACTTGAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CCAGCTCAAGTCCTAGTTGGCAAAAGCCACAGGCTGGGTGTGGCAGGCGGGCTGACCTCCCTCCACACGTaGATCTCACGCTTGACCCAG | + |
Preference number: 4 (lower is better) Translates to: PAQVLVGKSHRLGVAGGLTSLHT*ISRLTQ Trigger: CTGGGTCAAGCGTGAGATGCACGTGTGGAGGGAGGT...CAGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGCCAACTAGGACTTGAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | GCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGCTCCCCTCTGGATAAGCTaGTCCAGGGTCTTGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: AMQRAGLCAKRTKGTDPAPLWIS*SRVLGS Trigger: ACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGG...AGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | ATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGCCATCTGCAGGATCACATTaGGTTTGGCGGCCGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: ISRVSLVPRAYLHTLCQPSAGSH*VWRPAH Trigger: GTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGA...TGGCTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AAGGCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTTCTGCAGGATCACATTaGGTTTGGCGGCCGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: KAMQRAGLCAKRTKGTDPSAGSH*VWRPAH Trigger: GTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGA...AGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGGCTCCAGGTTGGCGATaGTCTCCTGGCAGCGGCAAA | + |
Preference number: 4 (lower is better) Translates to: EISRVSLVPRAYLHTLCQAPGWR*SPGSGK Trigger: TTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGC...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGATCCTCTGTGGGCAGTaGGGTGCCAGAAGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: HWGPGGARMSGLLLQLHLILCGQ*GARRLS Trigger: GCTGAGCCTTCTGGCACCCCACTGCCCACAGAGGAT...CAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGCCCAGCGCTCCAGGTTaGCGATGGTCTCCTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQPSAPG*RWSPGS Trigger: GCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGG...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGGAGGAACTGGTCGAGTaGTTCACCCTGCTTCTGCGG | + |
Preference number: 4 (lower is better) Translates to: HWGPGGARMSGLLLQLHLEELVE*FTLLLR Trigger: CCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTC...CAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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3UTR CAA 72 bp | GGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTaGTGGCTTCAGCTCACCCCTGGGAGGGGAGCTATG | + |
Preference number: 4 (lower is better) Translates to: GARMSGLLLQLH*WLQLTPGRGAM Trigger: CATAGCTCCCCTCCCAGGGGTGAGCTGAAGCCACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 72 bp | GCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTaGTCTTCACCTTCAGCTCTTGGGCTGAGCTGGGGT | + |
Preference number: 4 (lower is better) Translates to: AGIMADPWFHAG*SSPSALGLSWG Trigger: ACCCCAGCTCAGCCCAAGAGCTGAAGGTGAAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | TGCTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGGGCAAAGACAGGCCTTaGTGGACTTCTTCCAGCGCT | + |
Preference number: 4 (lower is better) Translates to: CWGPGGARMSGLLLQLHLGKDRP*WTSSSA Trigger: AGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCC...CAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
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CDS-3UTR TCA 90 bp | ACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTTCACCGAGCCCTGCTTaGACTCCCACCACTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: TGGQEVPGCQVCCFSCICSPSPA*TPTTSW Trigger: CCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGA...ACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | GCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTGCTTTCTTCACCGAGCCCTaGTTGAACTCCCACCACTTC | + |
Preference number: 4 (lower is better) Translates to: AMQRAGLCAKRTKGTDPAFFTEP*LNSHHF Trigger: GAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAAGAA...AGCAGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCGTGGAGGCCGCCGGTaGTCATATGGTCCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: AGAGGVVMPFPDMAAKTSRGGRR*SYGPAP Trigger: TGGAGCTGGACCATATGACCACCGGCGGCCTCCACG...AGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGGTGCGGTATTTGCCGCCCATaGACTCCAGGCGGTCAGCCC | + |
Preference number: 4 (lower is better) Translates to: VSWNPCRQLQEKRGWCWCGICRP*TPGGQP Trigger: GGGCTGACCGCCTGGAGTCCATGGGCGGCAAATACC...GCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CCAGCTCAAGTCCTAGTTGGCAAAAGCCACAGGCTGGGTGTGGCAGGCGGGCTGTTGCCCATCCTCACCTaGCCCCCAAGACTGATATTG | + |
Preference number: 4 (lower is better) Translates to: PAQVLVGKSHRLGVAGGLLPILT*PPRLIL Trigger: CAATATCAGTCTTGGGGGCCAGGTGAGGATGGGCAA...CAGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGCCAACTAGGACTTGAGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGAGGCAGGGTCTTGGGGAGTaGGTGGCGCAGAAAGCGCTT | + |
Preference number: 4 (lower is better) Translates to: ADTSSYQHKVIGAGAWLRQGLGE*VAQKAL Trigger: AAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTG...CCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGGTGCGCTGCTCCAGGGTCTTaGGGAGTGGGTGGCGCAGAA | + |
Preference number: 4 (lower is better) Translates to: VSWNPCRQLQEKRGWCWCAAPGS*GVGGAE Trigger: TTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGC...GCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGCCACCACATACTGAATaGTCTCCTCCTCCTCAGCGT | + |
Preference number: 4 (lower is better) Translates to: EISRVSLVPRAYLHTLCQPPHTE*SPPPQR Trigger: ACGCTGAGGAGGAGGAGATCATTCAGTATGTGGTGG...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGGCTTCTCCTGCGGCAGGTaGCGGGGTGATGGCATAGGG | + |
Preference number: 4 (lower is better) Translates to: QRLLSSLETWCHSPGSVGFSCGR*RGDGIG Trigger: CCCTATGCCATCACCCCGCCACCTGCCGCAGGAGAA...GCCTACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTAGGTACTCTTCCAGGTaGCTCAGGAACTCCCGTGGG | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVVMPFPDMAAKTRYSSR*LRNSRG Trigger: CCCACGGGAGTTCCTGAGCCACCTGGAAGAGTACCT...AGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CACTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGACTCCCACCACTTCTTaGCTGGCCCATTCATGTGGT | + |
Preference number: 4 (lower is better) Translates to: HWGPGGARMSGLLLQLHLTPTTS*LAHSCG Trigger: ACCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGT...CAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CTTGAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCTCCACATACAGTGTCTaGTACAGGTCCCGCTTGCGC | + |
Preference number: 4 (lower is better) Translates to: LEISRVSLVPRAYLHTLCSTYSV*YRSRLR Trigger: GCGCAAGCGGGACCTGTACCAGACACTGTATGTGGA...GCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | GGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTGGCAAAGACAGGCCTTaGTGGACTTCTTCCAGCGCT | + |
Preference number: 4 (lower is better) Translates to: GAGAGGVVMPFPDMAAKTGKDRP*WTSSSA Trigger: AGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCC...AGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CATCCCCGGAAGTTGAGGTTCCCTCAGCATCTCTGCTTTAGCATCTGCCCTAGGCGCTTGAGTTTGGGCTaGAGGGTGCCCACCACATAC | + |
Preference number: 4 (lower is better) Translates to: HPRKLRFPQHLCFSICPRRLSLG*RVPTTY Trigger: GTATGTGGTGGGCACCCTGCAGCCCAAACTCAAGCG...CCTAGGGCAGATGCTAAAGCAGAGATGCTGAGGGAACCTCAACTTCCGGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CCTACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCAGCCAGAAGGCTCAGCTaGCTGCTCCAGGCCGTCCTG | + |
Preference number: 4 (lower is better) Translates to: PTYTPYASQMSMGHGFCAARRLS*LLQAVL Trigger: CAGGACGGCCTGGAGCAGGCAGCTGAGCCTTCTGGC...TGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATCGGCTCGCTGCCCACTaGGTATTTGCCGCCCATGGA | + |
Preference number: 4 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNRLAAH*VFAAHG Trigger: TCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCG...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGAGGTACTCTTCCAGGTaGCTCAGGAACTCCCGTGGG | + |
Preference number: 4 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQRYSSR*LRNSRG Trigger: CCCACGGGAGTTCCTGAGCCACCTGGAAGAGTACCT...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 72 bp | AGGCGGCAGGTGGGAGCCCTATGGGAAAGGGGCTTCTaGATGTTCAGTCCATGTAGCATGGTTGTGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: RRQVGALWERGF*MFSPCSMVVWQ Trigger: CTGCCACACAACCATGCTACATGGACTGAACATCAAGAAGCCCCTTTCCCATAGGGCTCCCACCTGCCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 72 bp | TGCTGTGTCTGCAGGAGTGGGCTGCATCCCCGGAAGTaGAGGTTCCCTCAGCATCTCTGCTTTAGCATCTGC | + |
Preference number: 4 (lower is better) Translates to: CCVCRSGLHPRK*RFPQHLCFSIC Trigger: GCAGATGCTAAAGCAGAGATGCTGAGGGAACCTCAACTTCCGGGGATGCAGCCCACTCCTGCAGACACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 72 bp | AAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTaGGCTGAGGTTTCAGCTGGGCAATCACCAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: KQLPAQGNWSWG*AEVSAGQSPGR Trigger: CCTGCCTGGTGATTGCCCAGCTGAAACCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | TGGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACGTGCCCACCACATACTaGATGATCTCCTCCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: WCWCWWCGDALSRHGSKDVPTTY*MISSSS Trigger: TGAGGAGGAGGAGATCATTCAGTATGTGGTGGGCAC...GTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | CCTACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCAGGCGCAGAAAGCGCTTaGGTTTGGGCTGCAGGGTGC | + |
Preference number: 4 (lower is better) Translates to: PTYTPYASQMSMGHGFCAGAESA*VWAAGC Trigger: GCACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCC...TGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGGTTTCATGCTGGCTTGTCTTGTACCCTCACTGTATTaGAGAAACTCCTTCTTGAAC | + |
Preference number: 4 (lower is better) Translates to: RPAGRASWQTRGFMLACLVPSLY*RNSFLN Trigger: GTTCAAGAAGGAGTTTCTGCAATACAGTGAGGGTAC...AAGACAAGCCAGCATGAAACCACGGGTCTGCCATGATGCCCGCCCCGCTGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATGGTACAGGTCCCGCTTaGGCCAGAGGAACTGGTCGA | + |
Preference number: 4 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNGTGPA*ARGTGR Trigger: TCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACC...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
||
CDS-3UTR GCA 90 bp | TGCCTTTCAGACACTTGGTTTCTTGATTACCCAAAGAGCCCTGGACACTGGAGCCTGTGGGCAGTGGGGTaGCAGAAGGCTCAGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: CLSDTWFLDYPKSPGHWSLWAVG*QKAQLP Trigger: AGGCAGCTGAGCCTTCTGGCACCCCACTGCCCACAG...GCTCCAGTGTCCAGGGCTCTTTGGGTAATCAAGAAACCAAGTGTCTGAAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGAGGCTCGCTCCACCTGCTTaGACACTTCGGTCAACAGAT | + |
Preference number: 4 (lower is better) Translates to: ADTSSYQHKVIGAGAWLRLAPPA*TLRSTD Trigger: ATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAG...CCTCAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CCTTTCCAGACATGGCAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTTGGCGATGGTCTCCTaGCAGCGGCAAAGACAGGCC | + |
Preference number: 4 (lower is better) Translates to: PFQTWQQRLLSSLETWCHLAMVS*QRQRQA Trigger: GGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAA...ATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTGCCATGTCTGGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTACCGTCTCATCCTCTGTaGGCAGTGGGGTGCCAGAAG | + |
Preference number: 4 (lower is better) Translates to: QQRLLSSLETWCHSPGSVPSHPL*AVGCQK Trigger: CTTCTGGCACCCCACTGCCCACAGAGGATGAGACGG...TACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATACCTCCCTCCACACGTaGATCTCACGCTTGACCCAG | + |
Preference number: 4 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNTSLHT*ISRLTQ Trigger: CTGGGTCAAGCGTGAGATGCACGTGTGGAGGGAGGT...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCCGTGGAGGCCGCCGGTaGTCATATGGTCCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGRGGRR*SYGPAP Trigger: TGGAGCTGGACCATATGACCACCGGCGGCCTCCACG...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | TGCCAGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTGAAAGTGTCTTGGCGGCTCGCTGCCCACTaGGTATTTGCCGCCCATGGA | + |
Preference number: 4 (lower is better) Translates to: CQAPPLCNLVFSALKVSWRLAAH*VFAAHG Trigger: TCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCG...CCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGGTGCTTGCCCATCCTCACCTaGCCCCCAAGACTGATATTG | + |
Preference number: 4 (lower is better) Translates to: VSWNPCRQLQEKRGWCWCLPILT*PPRLIL Trigger: CAATATCAGTCTTGGGGGCCAGGTGAGGATGGGCAA...GCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGGCTGGCCCATTCATGTaGTTCTGGATCTGGGACAGC | + |
Preference number: 4 (lower is better) Translates to: LRTPIDQADGGTATRPTQAGPFM*FWIWDS Trigger: GCTGTCCCAGATCCAGAACCACATGAATGGGCCAGC...CTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGCCACCACTTCTTGGCTaGCCCATTCATGTGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQPPLLG*PIHVVL Trigger: CAGAACCACATGAATGGGCCAGCCAAGAAGTGGTGG...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGAGGAACTGGTCGAGTaGTTCACCCTGCTTCTGCGG | + |
Preference number: 4 (lower is better) Translates to: QQRLLSSLETWCHSPGSVEELVE*FTLLLR Trigger: CCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTC...TACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGGCTCCACATACAGTGTCTaGTACAGGTCCCGCTTGCGC | + |
Preference number: 4 (lower is better) Translates to: QRLLSSLETWCHSPGSVGSTYSV*YRSRLR Trigger: GCGCAAGCGGGACCTGTACCAGACACTGTATGTGGA...GCCTACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | ACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCAAAACTTCTTCCAGCGCTGTaGGTCGCCGGTGGGCACGTA | + |
Preference number: 4 (lower is better) Translates to: TYTPYASQMSMGHGFCAKLLPAL*VAGGHV Trigger: TACGTGCCCACCGGCGACTCACAGCGCTGGAAGAAG...TTTTGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | TGCCTTTCAGACACTTGGTTTCTTGATTACCCAAAGAGCCCTGGACACTGGAGCCGCTTGAGTTTGGGCTaGAGGGTGCCCACCACATAC | + |
Preference number: 4 (lower is better) Translates to: CLSDTWFLDYPKSPGHWSRLSLG*RVPTTY Trigger: GTATGTGGTGGGCACCCTGCAGCCCAAACTCAAGCG...GCTCCAGTGTCCAGGGCTCTTTGGGTAATCAAGAAACCAAGTGTCTGAAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATGCTGGCCCATTCATGTaGTTCTGGATCTGGGACAGC | + |
Preference number: 4 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNAGPFM*FWIWDS Trigger: GCTGTCCCAGATCCAGAACCACATGAATGGGCCAGC...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTCCACCACTTCTTGGCTaGCCCATTCATGTGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGPPLLG*PIHVVL Trigger: CAGAACCACATGAATGGGCCAGCCAAGAAGTGGTGG...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTACTTCCATACCCCTCTaGATAAGCTGCTCCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGTSIPL*ISCSRV Trigger: GACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGT...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CACAGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATCCGTCTCATCCTCTGTaGGCAGTGGGGTGCCAGAAG | + |
Preference number: 4 (lower is better) Translates to: HRVEDLSEHQWNWSQNTNPSHPL*AVGCQK Trigger: CTTCTGGCACCCCACTGCCCACAGAGGATGAGACGG...ATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | TGCCAGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTGAAAGTGTCTTGGTCACCGAGCCCTGCTTaGACTCCCACCACTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: CQAPPLCNLVFSALKVSWSPSPA*TPTTSW Trigger: CCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGA...CCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | GTGTCTTGGAACCCATGTAGGCAGCTTCAGGAGAAGAGAGGATGGTGCTGGTGCGCAGAAACTCCTTCTTaGACTCCACCCAGTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: VSWNPCRQLQEKRGWCWCAETPS*TPPSSS Trigger: TGAAGAACTGGGTGGAGTTCAAGAAGGAGTTTCTGC...GCACCAGCACCATCCTCTCTTCTCCTGAAGCTGCCTACATGGGTTCCAAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR TCA 90 bp | CAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTACCACCACATACTGAATaGTCTCCTCCTCCTCAGCGT | + |
Preference number: 4 (lower is better) Translates to: QQRLLSSLETWCHSPGSVPPHTE*SPPPQR Trigger: ACGCTGAGGAGGAGGAGATCATTCAGTATGTGGTGG...TACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CAGGCACCTCCTCTCTGTAATCTTGTTTTCTCTGCCTTGAAAGTGTCTTGGAACGGTACAGGTCCCGCTTaGGCCAGAGGAACTGGTCGA | + |
Preference number: 4 (lower is better) Translates to: QAPPLCNLVFSALKVSWNGTGPA*ARGTGR Trigger: TCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACC...GTTCCAAGACACTTTCAAGGCAGAGAAAACAAGATTACAGAGAGGAGGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCCCCCTCTGGATAAGCTaGTCCAGGGTCTTGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGPLWIS*SRVLGS Trigger: ACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGG...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGGCTCAGGAACTCCCGTaGGTCCTCGAAGATCTGTGT | + |
Preference number: 4 (lower is better) Translates to: NKAYSDCRHKQLPAQGNWAQELP*VLEDLC Trigger: ACACAGATCTTCGAGGACCCACGGGAGTTCCTGAGC...CCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATACTTCCATACCCCTCTaGATAAGCTGCTCCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNTSIPL*ISCSRV Trigger: GACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGT...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | GGTCTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCGGCACTTACCAATCTaGAGGATCACATTGGGTTTG | + |
Preference number: 4 (lower is better) Translates to: GLRTPIDQADGGTATRPTRHLPI*RITLGL Trigger: CAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCG...AGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | GCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTGTACCCTCACTGTATTaGAGAAACTCCTTCTTGAAC | + |
Preference number: 4 (lower is better) Translates to: AGAGGVVMPFPDMAAKTSVPSLY*RNSFLN Trigger: GTTCAAGAAGGAGTTTCTGCAATACAGTGAGGGTAC...AGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CTCAGAACACCAATAGACCAGGCAGATGGAGGAACCGCAACAAGGCCTACTCAGCCATTCATGTGGTTCTaGATCTGGGACAGCCAATAT | + |
Preference number: 4 (lower is better) Translates to: LRTPIDQADGGTATRPTQPFMWF*IWDSQY Trigger: ATATTGGCTGTCCCAGATCCAGAACCACATGAATGG...CTGAGTAGGCCTTGTTGCGGTTCCTCCATCTGCCTGGTCTATTGGTGTTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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3UTR CAA 72 bp | TGGTATGGGCAGACAGCCTGGCTGGATATTCAAGGCTaGGTGAAAATAGGGGATAGCCACACTCTCTTGAGA | + |
Preference number: 4 (lower is better) Translates to: WYGQTAWLDIQG*VKIGDSHTLLR Trigger: TCTCAAGAGAGTGTGGCTATCCCCTATTTTCACCAAGCCTTGAATATCCAGCCAGGCTGTCTGCCCATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGGCATGTGGTTCTGGATCTaGGACAGCCAATATTCTTCA | + |
Preference number: 4 (lower is better) Translates to: QRLLSSLETWCHSPGSVGMWFWI*DSQYSS Trigger: TGAAGAATATTGGCTGTCCCAGATCCAGAACCACAT...GCCTACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | CCTTTCCAGACATGGCAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATCCATTCATGTGGTTCTaGATCTGGGACAGCCAATAT | + |
Preference number: 4 (lower is better) Translates to: PFQTWQQRLLSSLETWCHPFMWF*IWDSQY Trigger: ATATTGGCTGTCCCAGATCCAGAACCACATGAATGG...ATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTGCCATGTCTGGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR GCA 90 bp | CACAGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATCGGCACTTACCAATCTaGAGGATCACATTGGGTTTG | + |
Preference number: 4 (lower is better) Translates to: HRVEDLSEHQWNWSQNTNRHLPI*RITLGL Trigger: CAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCG...ATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CCA 90 bp | AGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGAATGTGGTTCTGGATCTaGGACAGCCAATATTCTTCA | + |
Preference number: 4 (lower is better) Translates to: RVEDLSEHQWNWSQNTNRMWFWI*DSQYSS Trigger: TGAAGAATATTGGCTGTCCCAGATCCAGAACCACAT...TCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | AATGGCAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCGTGCACACCAGGGCTCGGTaGCCCATCCTCACCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: NGRQLVSGQRGGHHGRPVHTRAR*PILTWP Trigger: GGGCCAGGTGAGGATGGGCAACCGAGCCCTGGTGTG...CACGGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTGCCATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | GCATCTCAGCTCGGCACTTACCAATCTGCAGGATCACATTGGGTTTaGCGGCCGGCCCACCCCGCGGGGCAGGGTAGGCGTGGAGGCCGC | + |
Preference number: 5 (lower is better) Translates to: ASQLGTYQSAGSHWV*RPAHPAGQGRRGGR Trigger: GCGGCCTCCACGCCTACCCTGCCCCGCGGGGTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAGCTGAGATGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | CAGTGTGGCGGGCCGGCTCGCTGCCCACTGGGTATTTGCCGCCCATaGACTCCAGGCGGTCAGCCCACCTCTCCAGACGGTAGAAGACCT | + |
Preference number: 5 (lower is better) Translates to: QCGGPARCPLGICRP*TPGGQPTSPDGRRP Trigger: AGGTCTTCTACCGTCTGGAGAGGTGGGCTGACCGCCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCGGCCCGCCACACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CCAAGACTGGCCGGTTGCCCTGGGCGGCAGCTAGGGTACCAGCTGGATCTGCTGACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: PRLAGCPGRQLGYQLDLLTQRSR*AMVSWQ Trigger: CTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGT...CAGCAGATCCAGCTGGTACCCTAGCTGCCGCCCAGGGCAACCGGCCAGTCTTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CAGGACCAGGGCAGACAGATGAGGGGTAGGCGGCAGGTGGGAGCCCTATGGGAAACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: QDQGRQMRGRRQVGALWETQRSR*AMVSWQ Trigger: CTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGT...TTCCCATAGGGCTCCCACCTGCCGCCTACCCCTCATCTGTCTGCCCTGGTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | GGCAGTGGGGTGCCAGAAGGCTCAGCTGCCTGCTCCAGGCCGTCCTaGACTTCCATACCCCTCTGGATAAGCTGCTCCAGGGTCTTGGGG | + |
Preference number: 5 (lower is better) Translates to: GSGVPEGSAACSRPS*TSIPLWISCSRVLG Trigger: CCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGTGCAGGACGGCCTGGAGCAGGCAGCTGAGCCTTCTGGCACCCCACTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | GTTCCAGCATCTCAGCTCGGCACTTACCAATCTGCAGGATCACATTaGGTTTGGCGGCCGGCCCACCCCGCGGGGCAGGGTAGGCGTGGA | + |
Preference number: 5 (lower is better) Translates to: VPASQLGTYQSAGSH*VWRPAHPAGQGRRG Trigger: TCCACGCCTACCCTGCCCCGCGGGGTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAGCTGAGATGCTGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 90 bp | GCTCCAGGTTGGCGATGGTCTCCTGGCAGCGGCAAAGACAGGCCTTaGTGGACTTCTTCCAGCGCTGTGAGTCGCCGGTGGGCACGTAGC | + |
Preference number: 5 (lower is better) Translates to: APGWRWSPGSGKDRP*WTSSSAVSRRWARS Trigger: GCTACGTGCCCACCGGCGACTCACAGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | GTCCTCCGTACGTGTTCCAGCATCTCAGCTCGGCACTTACCAATCTaGAGGATCACATTGGGTTTGGCGGCCGGCCCACCCCGCGGGGCA | + |
Preference number: 5 (lower is better) Translates to: VLRTCSSISARHLPI*RITLGLAAGPPRGA Trigger: TGCCCCGCGGGGTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAGCTGAGATGCTGGAACACGTACGGAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | CAGTGTCTGGTACAGGTCCCGCTTGCGCCAGAGGAACTGGTCGAGTaGTTCACCCTGCTTCTGCGGCAGCTCCAGCTCCCGCTGAATGGC | + |
Preference number: 5 (lower is better) Translates to: QCLVQVPLAPEELVE*FTLLLRQLQLPLNG Trigger: GCCATTCAGCGGGAGCTGGAGCTGCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GCTAATGGCAGGCAGCTAGTGAGCGGCCAGCGGGGCGGGCATCATGGCAGACCCTCTCGCTCCACCTGCTaGGACACTTCGGTCAACAGA | + |
Preference number: 5 (lower is better) Translates to: ANGRQLVSGQRGGHHGRPSRSTC*DTSVNR Trigger: TCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGA...GGGTCTGCCATGATGCCCGCCCCGCTGGCCGCTCACTAGCTGCCTGCCATTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | GTGAGTCGCCGGTGGGCACGTAGCCGTCCAAGTTGTTCTCCAGCTTaGCCACCGACCTGTGCAACCCTTTCAGCTCTCGCTCCACCTGCT | + |
Preference number: 5 (lower is better) Translates to: VSRRWARSRPSCSPA*PPTCATLSALAPPA Trigger: AGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGTCGGTGGGCAAGCTGGAGAACAACTTGGACGGCTACGTGCCCACCGGCGACTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | GCCTGCTCCAGGCCGTCCTGCACTTCCATACCCCTCTGGATAAGCTaGTCCAGGGTCTTGGGGAGTGGGTGGCGCAGAAAGCGCTTGAGT | + |
Preference number: 5 (lower is better) Translates to: ACSRPSCTSIPLWIS*SRVLGSGWRRKRLS Trigger: ACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGTGCAGGACGGCCTGGAGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | GTCTCATCCTCTGTGGGCAGTGGGGTGCCAGAAGGCTCAGCTGCCTaGTCCAGGCCGTCCTGCACTTCCATACCCCTCTGGATAAGCTGC | + |
Preference number: 5 (lower is better) Translates to: VSSSVGSGVPEGSAA*SRPSCTSIPLWISC Trigger: GCAGCTTATCCAGAGGGGTATGGAAGTGCAGGACGGCCTGGAGCAGGCAGCTGAGCCTTCTGGCACCCCACTGCCCACAGAGGATGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | ACCCACCTGCCGCAGGTACTCTTCCAGGTGGCTCAGGAACTCCCGTaGGTCCTCGAAGATCTGTGTATCCACACCAGGGCTCGGTTGCCC | + |
Preference number: 5 (lower is better) Translates to: THLPQVLFQVAQELP*VLEDLCIHTRARLP Trigger: GGGCAACCGAGCCCTGGTGTGGATACACAGATCTTCGAGGACCCACGGGAGTTCCTGAGCCACCTGGAAGAGTACCTGCGGCAGGTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | TCCACATACAGTGTCTGGTACAGGTCCCGCTTGCGCCAGAGGAACTaGTCGAGTGGTTCACCCTGCTTCTGCGGCAGCTCCAGCTCCCGC | + |
Preference number: 5 (lower is better) Translates to: STYSVWYRSRLRQRN*SSGSPCFCGSSSSR Trigger: GCGGGAGCTGGAGCTGCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CTTAAGGCTCCTGCAAGGGTCTGGTCGGGGAGCCAAAGGCCATGCAGCGAGCTGAGAAAGCGCTTGAGTTaGGGCTGCAGGGTGCCCACC | + |
Preference number: 5 (lower is better) Translates to: LKAPARVWSGSQRPCSELRKRLS*GCRVPT Trigger: GGTGGGCACCCTGCAGCCCAAACTCAAGCGCTTTCT...CAGCTCGCTGCATGGCCTTTGGCTCCCCGACCAGACCCTTGCAGGAGCCTTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 90 bp | TCTCCAGACGGTAGAAGACCTCCCTCCACACGTGCATCTCACGCTTaGCCCAGCGCTCCAGGTTGGCGATGGTCTCCTGGCAGCGGCAAA | + |
Preference number: 5 (lower is better) Translates to: SPDGRRPPSTRASHA*PSAPGWRWSPGSGK Trigger: TTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACGTGTGGAGGGAGGTCTTCTACCGTCTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | CCTCCTCCTCAGCGTCCACATACAGTGTCTGGTACAGGTCCCGCTTaGGCCAGAGGAACTGGTCGAGTGGTTCACCCTGCTTCTGCGGCA | + |
Preference number: 5 (lower is better) Translates to: PPPQRPHTVSGTGPA*ARGTGRVVHPASAA Trigger: TGCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGACGCTGAGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | TCCATACCCCTCTGGATAAGCTGCTCCAGGGTCTTGGGGAGTGGGTaGCGCAGAAAGCGCTTGAGTTTGGGCTGCAGGGTGCCCACCACA | + |
Preference number: 5 (lower is better) Translates to: SIPLWISCSRVLGSG*RRKRLSLGCRVPTT Trigger: TGTGGTGGGCACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | CACTTCCATACCCCTCTGGATAAGCTGCTCCAGGGTCTTGGGGAGTaGGTGGCGCAGAAAGCGCTTGAGTTTGGGCTGCAGGGTGCCCAC | + |
Preference number: 5 (lower is better) Translates to: HFHTPLDKLLQGLGE*VAQKALEFGLQGAH Trigger: GTGGGCACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGACGTGCATCTCACGCTaGACCCAGCGCTCCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: EISRVSLVPRAYLHTLCQTCISR*TQRSRL Trigger: CAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACGT...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 90 bp | CTGGCAGCGGCAAAGACAGGCCTTGATGGACTTCTTCCAGCGCTGTaGGTCGCCGGTGGGCACGTAGCCGTCCAAGTTGTTCTCCAGCTT | + |
Preference number: 5 (lower is better) Translates to: LAAAKTGLDGLLPAL*VAGGHVAVQVVLQL Trigger: AAGCTGGAGAACAACTTGGACGGCTACGTGCCCACCGGCGACTCACAGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 90 bp | CCCATCCTCACCTGGCCCCCAAGACTGATATTGCTGAGCCTCAACTaGCTCCTGTTCAGGCAGTTCTCCTGCGGCAGGTGGCGGGGTGAT | + |
Preference number: 5 (lower is better) Translates to: PILTWPPRLILLSLN*LLFRQFSCGRWRGD Trigger: ATCACCCCGCCACCTGCCGCAGGAGAACTGCCTGAACAGGAGTCAGTTGAGGCTCAGCAATATCAGTCTTGGGGGCCAGGTGAGGATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | CCTTTCAGCTCTCGCTCCACCTGCTTGGACACTTCGGTCAACAGATaGCGGTGGGTCCTCCGTACGTGTTCCAGCATCTCAGCTCGGCAC | + |
Preference number: 5 (lower is better) Translates to: PFSSRSTCLDTSVNR*RWVLRTCSSISARH Trigger: GTGCCGAGCTGAGATGCTGGAACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGAGCTGAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | TGCCCACCGACCTGTGCAACCCTTTCAGCTCTCGCTCCACCTGCTTaGACACTTCGGTCAACAGATGCCGGTGGGTCCTCCGTACGTGTT | + |
Preference number: 5 (lower is better) Translates to: CPPTCATLSALAPPA*TLRSTDAGGSSVRV Trigger: AACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGTCGGTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | TGCATCTCACGCTTGACCCAGCGCTCCAGGTTGGCGATGGTCTCCTaGCAGCGGCAAAGACAGGCCTTGATGGACTTCTTCCAGCGCTGT | + |
Preference number: 5 (lower is better) Translates to: CISRLTQRSRLAMVS*QRQRQALMDFFQRC Trigger: ACAGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGTGAGATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CTTGAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCATCTGCAGGATCACATaGGGTTTGGCGGCCGGCCCA | + |
Preference number: 5 (lower is better) Translates to: LEISRVSLVPRAYLHTLCICRIT*GLAAGP Trigger: TGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGAT...GCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GCTGGGGGCCAGGAGGTGCCAGGATGTCAGGTCTGCTGCTTCAGCTGCATTTGTCGGCAAAGACAGGCCTaGATGGACTTCTTCCAGCGC | + |
Preference number: 5 (lower is better) Translates to: AGGQEVPGCQVCCFSCICRQRQA*MDFFQR Trigger: GCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCG...ACAAATGCAGCTGAAGCAGCAGACCTGACATCCTGGCACCTCCTGGCCCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023268.14 |
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CDS-3UTR CAA 90 bp | GGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTCTGCCCACTGGGTATTaGCCGCCCATGGACTCCAGG | + |
Preference number: 5 (lower is better) Translates to: GAGAGGVVMPFPDMAAKTLPTGY*PPMDSR Trigger: CCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAG...AGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTCACACCAGGGCTCGGTaGCCCATCCTCACCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGHTRAR*PILTWP Trigger: GGGCCAGGTGAGGATGGGCAACCGAGCCCTGGTGTG...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 90 bp | TGGTTCTGGATCTGGGACAGCCAATATTCTTCAGAGCCACCCACCTaGCGCAGGTACTCTTCCAGGTGGCTCAGGAACTCCCGTGGGTCC | + |
Preference number: 5 (lower is better) Translates to: WFWIWDSQYSSEPPT*RRYSSRWLRNSRGS Trigger: GGACCCACGGGAGTTCCTGAGCCACCTGGAAGAGTACCTGCGGCAGGTGGGTGGCTCTGAAGAATATTGGCTGTCCCAGATCCAGAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | AGCTCTCGCTCCACCTGCTTGGACACTTCGGTCAACAGATGCCGGTaGGTCCTCCGTACGTGTTCCAGCATCTCAGCTCGGCACTTACCA | + |
Preference number: 5 (lower is better) Translates to: SSRSTCLDTSVNRCR*VLRTCSSISARHLP Trigger: TGGTAAGTGCCGAGCTGAGATGCTGGAACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGAGCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | AAGGCCATGCAGCGAGCTGGGCTCTGTGCCAAGAGGACCAAGGGTACAGACCCTAACTCCCACCACTTCTaGGCTGGCCCATTCATGTGG | + |
Preference number: 5 (lower is better) Translates to: KAMQRAGLCAKRTKGTDPNSHHF*AGPFMW Trigger: CCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGTT...AGGGTCTGTACCCTTGGTCCTCTTGGCACAGAGCCCAGCTCGCTGCATGGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GAGATCTCCAGGGTCTCCCTAGTCCCCAGGGCCTACCTACACACCCTATGCCAGTTCACCGAGCCCTGCTaGAACTCCCACCACTTCTTG | + |
Preference number: 5 (lower is better) Translates to: EISRVSLVPRAYLHTLCQFTEPC*NSHHFL Trigger: CAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAA...CTGGCATAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | AACCGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAGCTGCTCCAGGGTCTaGGGGAGTGGGTGGCGCAGA | + |
Preference number: 5 (lower is better) Translates to: NRNKAYSDCRHKQLPAQGSCSRV*GSGWRR Trigger: TCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCT...ACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 90 bp | TGGTCGAGTGGTTCACCCTGCTTCTGCGGCAGCTCCAGCTCCCGCTaGATGGCTTCACGGGAGAGTGTACCCTCACTGTATTGCAGAAAC | + |
Preference number: 5 (lower is better) Translates to: WSSGSPCFCGSSSSR*MASRESVPSLYCRN Trigger: GTTTCTGCAATACAGTGAGGGTACACTCTCCCGTGAAGCCATTCAGCGGGAGCTGGAGCTGCCGCAGAAGCAGGGTGAACCACTCGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | CGAGTGGTTCACCCTGCTTCTGCGGCAGCTCCAGCTCCCGCTGAATaGCTTCACGGGAGAGTGTACCCTCACTGTATTGCAGAAACTCCT | + |
Preference number: 5 (lower is better) Translates to: RVVHPASAAAPAPAE*LHGRVYPHCIAETP Trigger: AGGAGTTTCTGCAATACAGTGAGGGTACACTCTCCCGTGAAGCCATTCAGCGGGAGCTGGAGCTGCCGCAGAAGCAGGGTGAACCACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAGGCACGTGCATCTCACGCTaGACCCAGCGCTCCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: QRLLSSLETWCHSPGSVGTCISR*TQRSRL Trigger: CAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACGT...GCCTACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CCTTTCCAGACATGGCAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATCTGCCCACTGGGTATTaGCCGCCCATGGACTCCAGG | + |
Preference number: 5 (lower is better) Translates to: PFQTWQQRLLSSLETWCHLPTGY*PPMDSR Trigger: CCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAG...ATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTGCCATGTCTGGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGTACAGGTCCCGCTaGCGCCAGAGGAACTGGTCG | + |
Preference number: 5 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNWYRSR*RQRNWS Trigger: CGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCA...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 90 bp | CAATATTCTTCAGAGCCACCCACCTGCCGCAGGTACTCTTCCAGGTaGCTCAGGAACTCCCGTGGGTCCTCGAAGATCTGTGTATCCACA | + |
Preference number: 5 (lower is better) Translates to: QYSSEPPTCRRYSSR*LRNSRGSSKICVST Trigger: TGTGGATACACAGATCTTCGAGGACCCACGGGAGTTCCTGAGCCACCTGGAAGAGTACCTGCGGCAGGTGGGTGGCTCTGAAGAATATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTTCTCAGAACTCCCACCACTTCTaGGCTGGCCCATTCATGTGG | + |
Preference number: 5 (lower is better) Translates to: GAGGVVMPFPDMAAKTSQNSHHF*AGPFMW Trigger: CCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGTT...CTGAGAAGTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CAGCAAAGACTTCTCAGCAGCCTTGAGACCTGGTGTCATTCTCCTGGCTCTGTAAGAAAGCGCTTGAGTTaGGGCTGCAGGGTGCCCACC | + |
Preference number: 5 (lower is better) Translates to: QQRLLSSLETWCHSPGSVRKRLS*GCRVPT Trigger: GGTGGGCACCCTGCAGCCCAAACTCAAGCGCTTTCT...TACAGAGCCAGGAGAATGACACCAGGTCTCAAGGCTGCTGAGAAGTCTTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CGCAACAAGGCCTACTCAGACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGCGCAGAAAGCGCTaGAGTTTGGGCTGCAGGGTG | + |
Preference number: 5 (lower is better) Translates to: RNKAYSDCRHKQLPAQGNWRRKR*SLGCRV Trigger: CACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCCA...ATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGTCTGAGTAGGCCTTGTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CACAGGGTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGCTGCTCCAGGGTCTaGGGGAGTGGGTGGCGCAGA | + |
Preference number: 5 (lower is better) Translates to: HRVEDLSEHQWNWSQNTNSCSRV*GSGWRR Trigger: TCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCT...ATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCACCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | CCTACCTACACACCCTATGCCAGCCAAATGAGTATGGGTCATGGCTTTTGTGCATGGCGCAGAAAGCGCTaGAGTTTGGGCTGCAGGGTG | + |
Preference number: 5 (lower is better) Translates to: PTYTPYASQMSMGHGFCAWRRKR*SLGCRV Trigger: CACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCCA...TGCACAAAAGCCATGACCCATACTCATTTGGCTGGCATAGGGTGTGTAGGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAATCTGCAGGATCACATaGGGTTTGGCGGCCGGCCCA | + |
Preference number: 5 (lower is better) Translates to: VEDLSEHQWNWSQNTNRPICRIT*GLAAGP Trigger: TGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGAT...TGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCAGGCTCTCGCTCCACCTGCTaGGACACTTCGGTCAACAGA | + |
Preference number: 5 (lower is better) Translates to: EDLSEHQWNWSQNTNRPGSRSTC*DTSVNR Trigger: TCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGA...GCCTGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | TGGTGCTGGTGCTGGTGGTGTGGTGATGCCCTTTCCAGACATGGCAGCAAAGACTGTACCCTCACTGTATaGCAGAAACTCCTTCTTGAA | + |
Preference number: 5 (lower is better) Translates to: WCWCWWCGDALSRHGSKDCTLTV*QKLLLE Trigger: TTCAAGAAGGAGTTTCTGCAATACAGTGAGGGTACA...GTCTTTGCTGCCATGTCTGGAAAGGGCATCACCACACCACCAGCACCAGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | GTGGAGGATCTGTCAGAACATCAGTGGAATTGGTCTCAGAACACCAATAGACCATTCACCGAGCCCTGCTaGAACTCCCACCACTTCTTG | + |
Preference number: 5 (lower is better) Translates to: VEDLSEHQWNWSQNTNRPFTEPC*NSHHFL Trigger: CAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAA...TGGTCTATTGGTGTTCTGAGACCAATTCCACTGATGTTCTGACAGATCCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS-3UTR CAA 90 bp | ACTGCAGACACAAGCAGCTACCAGCACAAGGTAATTGGAGCTGGGGCTTGGCTGTGTACCCTCACTGTATaGCAGAAACTCCTTCTTGAA | + |
Preference number: 5 (lower is better) Translates to: TADTSSYQHKVIGAGAWLCTLTV*QKLLLE Trigger: TTCAAGAAGGAGTTTCTGCAATACAGTGAGGGTACA...CAGCCAAGCCCCAGCTCCAATTACCTTGTGCTGGTAGCTGCTTGTGTCTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | GGGCCGGCTCGCTGCCCACTGGGTATTTGCCGCCCATaGACTCCAGGCGGTCAGCCCACCTCTCCAGACGGT | + |
Preference number: 6 (lower is better) Translates to: GPARCPLGICRP*TPGGQPTSPDG Trigger: ACCGTCTGGAGAGGTGGGCTGACCGCCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | ACAGTGTGGCGGGCCGGCTCGCTGCCCACTGGGTATTaGCCGCCCATGGACTCCAGGCGGTCAGCCCACCTC | + |
Preference number: 6 (lower is better) Translates to: TVWRAGSLPTGY*PPMDSRRSAHL Trigger: GAGGTGGGCTGACCGCCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCGGCCCGCCACACTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | CCTACAGAGACAGTGTGGCGGGCCGGCTCGCTGCCCACTGGGTATTaGCCGCCCATGGACTCCAGGCGGTCAGCCCACCTCTCCAGACGG | + |
Preference number: 6 (lower is better) Translates to: PTETVWRAGSLPTGY*PPMDSRRSAHLSRR Trigger: CCGTCTGGAGAGGTGGGCTGACCGCCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCGGCCCGCCACACTGTCTCTGTAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | CCACACCTACAGAGACAGTGTGGCGGGCCGGCTCGCTaGCCACTGGGTATTTGCCGCCCATGGACTCCAGGC | + |
Preference number: 6 (lower is better) Translates to: PHLQRQCGGPAR*PLGICRPWTPG Trigger: GCCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCGGCCCGCCACACTGTCTCTGTAGGTGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | CTCGGCACTTACCAATCTGCAGGATCACATTGGGTTTaGCGGCCGGCCCACCCCGCGGGGCAGGGTAGGCGT | + |
Preference number: 6 (lower is better) Translates to: LGTYQSAGSHWV*RPAHPAGQGRR Trigger: ACGCCTACCCTGCCCCGCGGGGTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | TACAGAGACAGTGTGGCGGGCCGGCTCGCTGCCCACTaGGTATTTGCCGCCCATGGACTCCAGGCGGTCAGC | + |
Preference number: 6 (lower is better) Translates to: YRDSVAGRLAAH*VFAAHGLQAVS Trigger: GCTGACCGCCTGGAGTCCATGGGCGGCAAATACCCAGTGGGCAGCGAGCCGGCCCGCCACACTGTCTCTGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | TCTCAGCTCGGCACTTACCAATCTGCAGGATCACATTaGGTTTGGCGGCCGGCCCACCCCGCGGGGCAGGGT | + |
Preference number: 6 (lower is better) Translates to: SQLGTYQSAGSH*VWRPAHPAGQG Trigger: ACCCTGCCCCGCGGGGTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAGCTGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | GTACAGGTCCCGCTTGCGCCAGAGGAACTGGTCGAGTaGTTCACCCTGCTTCTGCGGCAGCTCCAGCTCCCG | + |
Preference number: 6 (lower is better) Translates to: VQVPLAPEELVE*FTLLLRQLQLP Trigger: CGGGAGCTGGAGCTGCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | ATCTCAGCTCGGCACTTACCAATCTGCAGGATCACATaGGGTTTGGCGGCCGGCCCACCCCGCGGGGCAGGG | + |
Preference number: 6 (lower is better) Translates to: ISARHLPICRIT*GLAAGPPRGAG Trigger: CCCTGCCCCGCGGGGTGGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAGCTGAGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | ATCCTCTGTGGGCAGTGGGGTGCCAGAAGGCTCAGCTaGCTGCTCCAGGCCGTCCTGCACTTCCATACCCCT | + |
Preference number: 6 (lower is better) Translates to: ILCGQWGARRLS*LLQAVLHFHTP Trigger: AGGGGTATGGAAGTGCAGGACGGCCTGGAGCAGGCAGCTGAGCCTTCTGGCACCCCACTGCCCACAGAGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | CACACGTGCATCTCACGCTTGACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAGCGGCAAAGACAGGCC | + |
Preference number: 6 (lower is better) Translates to: HTCISRLTQRSR*AMVSWQRQRQA Trigger: GGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | ACCTCCCTCCACACGTGCATCTCACGCTTGACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAGCGGCAAAGACAGGCCTTGATGGAC | + |
Preference number: 6 (lower is better) Translates to: TSLHTCISRLTQRSR*AMVSWQRQRQALMD Trigger: GTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACGTGTGGAGGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 72 bp | TGGCGATGGTCTCCTGGCAGCGGCAAAGACAGGCCTTaGTGGACTTCTTCCAGCGCTGTGAGTCGCCGGTGG | + |
Preference number: 6 (lower is better) Translates to: WRWSPGSGKDRP*WTSSSAVSRRW Trigger: CCACCGGCGACTCACAGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | AGTGTCTGGTACAGGTCCCGCTTGCGCCAGAGGAACTaGTCGAGTGGTTCACCCTGCTTCTGCGGCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: SVWYRSRLRQRN*SSGSPCFCGSS Trigger: GGAGCTGCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | TCCTCCTCCTCAGCGTCCACATACAGTGTCTGGTACAGGTCCCGCTaGCGCCAGAGGAACTGGTCGAGTGGTTCACCCTGCTTCTGCGGC | + |
Preference number: 6 (lower is better) Translates to: SSSSASTYSVWYRSR*RQRNWSSGSPCFCG Trigger: GCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGACGCTGAGGAGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | CCGTCCTGCACTTCCATACCCCTCTGGATAAGCTGCTCCAGGGTCTaGGGGAGTGGGTGGCGCAGAAAGCGCTTGAGTTTGGGCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: PSCTSIPLWISCSRV*GSGWRRKRLSLGCR Trigger: CCTGCAGCCCAAACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGTGCAGGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | CGGTGGGCACGTAGCCGTCCAAGTTGTTCTCCAGCTTaGCCACCGACCTGTGCAACCCTTTCAGCTCTCGCT | + |
Preference number: 6 (lower is better) Translates to: RWARSRPSCSPA*PPTCATLSALA Trigger: AGCGAGAGCTGAAAGGGTTGCACAGGTCGGTGGGCAAGCTGGAGAACAACTTGGACGGCTACGTGCCCACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | AGGCCGTCCTGCACTTCCATACCCCTCTGGATAAGCTaGTCCAGGGTCTTGGGGAGTGGGTGGCGCAGAAAG | + |
Preference number: 6 (lower is better) Translates to: RPSCTSIPLWIS*SRVLGSGWRRK Trigger: CTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGTGCAGGACGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | CGCTTGACCCAGCGCTCCAGGTTGGCGATGGTCTCCTaGCAGCGGCAAAGACAGGCCTTGATGGACTTCTTC | + |
Preference number: 6 (lower is better) Translates to: RLTQRSRLAMVS*QRQRQALMDFF Trigger: GAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | TCAGAGCCACCCACCTGCCGCAGGTACTCTTCCAGGTaGCTCAGGAACTCCCGTGGGTCCTCGAAGATCTGT | + |
Preference number: 6 (lower is better) Translates to: SEPPTCRRYSSR*LRNSRGSSKIC Trigger: ACAGATCTTCGAGGACCCACGGGAGTTCCTGAGCCACCTGGAAGAGTACCTGCGGCAGGTGGGTGGCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | CTCTGGATAAGCTGCTCCAGGGTCTTGGGGAGTGGGTaGCGCAGAAAGCGCTTGAGTTTGGGCTGCAGGGTG | + |
Preference number: 6 (lower is better) Translates to: LWISCSRVLGSG*RRKRLSLGCRV Trigger: CACCCTGCAGCCCAAACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | ACCCCTCTGGATAAGCTGCTCCAGGGTCTTGGGGAGTaGGTGGCGCAGAAAGCGCTTGAGTTTGGGCTGCAG | + |
Preference number: 6 (lower is better) Translates to: TPLDKLLQGLGE*VAQKALEFGLQ Trigger: CTGCAGCCCAAACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | TTGGCGATGGTCTCCTGGCAGCGGCAAAGACAGGCCTaGATGGACTTCTTCCAGCGCTGTGAGTCGCCGGTG | + |
Preference number: 6 (lower is better) Translates to: LAMVSWQRQRQA*MDFFQRCESPV Trigger: CACCGGCGACTCACAGCGCTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | TTGCCCACCGACCTGTGCAACCCTTTCAGCTCTCGCTCCACCTGCTaGGACACTTCGGTCAACAGATGCCGGTGGGTCCTCCGTACGTGT | + |
Preference number: 6 (lower is better) Translates to: LPTDLCNPFSSRSTC*DTSVNRCRWVLRTC Trigger: ACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGTCGGTGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | CTCCCGTGGGTCCTCGAAGATCTGTGTATCCACACCAGGGCTCGGTaGCCCATCCTCACCTGGCCCCCAAGACTGATATTGCTGAGCCTC | + |
Preference number: 6 (lower is better) Translates to: LPWVLEDLCIHTRAR*PILTWPPRLILLSL Trigger: GAGGCTCAGCAATATCAGTCTTGGGGGCCAGGTGAGGATGGGCAACCGAGCCCTGGTGTGGATACACAGATCTTCGAGGACCCACGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | CCGTCCAAGTTGTTCTCCAGCTTGCCCACCGACCTGTaGAACCCTTTCAGCTCTCGCTCCACCTGCTTGGAC | + |
Preference number: 6 (lower is better) Translates to: PSKLFSSLPTDL*NPFSSRSTCLD Trigger: GTCCAAGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGTCGGTGGGCAAGCTGGAGAACAACTTGGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | CAGCGTCCACATACAGTGTCTGGTACAGGTCCCGCTTaGGCCAGAGGAACTGGTCGAGTGGTTCACCCTGCT | + |
Preference number: 6 (lower is better) Translates to: QRPHTVSGTGPA*ARGTGRVVHPA Trigger: AGCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGACGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | TCCACCTGCTTGGACACTTCGGTCAACAGATGCCGGTaGGTCCTCCGTACGTGTTCCAGCATCTCAGCTCGG | + |
Preference number: 6 (lower is better) Translates to: STCLDTSVNRCR*VLRTCSSISAR Trigger: CCGAGCTGAGATGCTGGAACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | ACCTGTGCAACCCTTTCAGCTCTCGCTCCACCTGCTTaGACACTTCGGTCAACAGATGCCGGTGGGTCCTCC | + |
Preference number: 6 (lower is better) Translates to: TCATLSALAPPA*TLRSTDAGGSS Trigger: GGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | CACCCTGCTTCTGCGGCAGCTCCAGCTCCCGCTGAATaGCTTCACGGGAGAGTGTACCCTCACTGTATTGCA | + |
Preference number: 6 (lower is better) Translates to: HPASAAAPAPAE*LHGRVYPHCIA Trigger: TGCAATACAGTGAGGGTACACTCTCCCGTGAAGCCATTCAGCGGGAGCTGGAGCTGCCGCAGAAGCAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | GACCTGTGCAACCCTTTCAGCTCTCGCTCCACCTGCTaGGACACTTCGGTCAACAGATGCCGGTGGGTCCTC | + |
Preference number: 6 (lower is better) Translates to: DLCNPFSSRSTC*DTSVNRCRWVL Trigger: GAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | TCAGCGTCCACATACAGTGTCTGGTACAGGTCCCGCTaGCGCCAGAGGAACTGGTCGAGTGGTTCACCCTGC | + |
Preference number: 6 (lower is better) Translates to: SASTYSVWYRSR*RQRNWSSGSPC Trigger: GCAGGGTGAACCACTCGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGACGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS TCA 72 bp | ACCTGGCCCCCAAGACTGATATTGCTGAGCCTCAACTaGCTCCTGTTCAGGCAGTTCTCCTGCGGCAGGTGG | + |
Preference number: 6 (lower is better) Translates to: TWPPRLILLSLN*LLFRQFSCGRW Trigger: CCACCTGCCGCAGGAGAACTGCCTGAACAGGAGTCAGTTGAGGCTCAGCAATATCAGTCTTGGGGGCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | TCTCGCTCCACCTGCTTGGACACTTCGGTCAACAGATaGCGGTGGGTCCTCCGTACGTGTTCCAGCATCTCA | + |
Preference number: 6 (lower is better) Translates to: SRSTCLDTSVNR*RWVLRTCSSIS Trigger: TGAGATGCTGGAACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAGTGTCCAAGCAGGTGGAGCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CCA 72 bp | ATGATCTCCTCCTCCTCAGCGTCCACATACAGTGTCTaGTACAGGTCCCGCTTGCGCCAGAGGAACTGGTCG | + |
Preference number: 6 (lower is better) Translates to: MISSSSASTYSV*YRSRLRQRNWS Trigger: CGACCAGTTCCTCTGGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGACGCTGAGGAGGAGGAGATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | GTCCTCGAAGATCTGTGTATCCACACCAGGGCTCGGTaGCCCATCCTCACCTGGCCCCCAAGACTGATATTG | + |
Preference number: 6 (lower is better) Translates to: VLEDLCIHTRAR*PILTWPPRLIL Trigger: CAATATCAGTCTTGGGGGCCAGGTGAGGATGGGCAACCGAGCCCTGGTGTGGATACACAGATCTTCGAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | ACTTCCATACCCCTCTGGATAAGCTGCTCCAGGGTCTaGGGGAGTGGGTGGCGCAGAAAGCGCTTGAGTTTG | + |
Preference number: 6 (lower is better) Translates to: TSIPLWISCSRV*GSGWRRKRLSL Trigger: CAAACTCAAGCGCTTTCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTATGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS GCA 72 bp | TCCTTCTTGAACTCCACCCAGTTCTTCACCGAGCCCTaGTTGAACTCCCACCACTTCTTGGCTGGCCCATTC | + |
Preference number: 6 (lower is better) Translates to: SFLNSTQFFTEP*LNSHHFLAGPF Trigger: GAATGGGCCAGCCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAAGAACTGGGTGGAGTTCAAGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | TTCTTCACCGAGCCCTGCTTGAACTCCCACCACTTCTaGGCTGGCCCATTCATGTGGTTCTGGATCTGGGAC | + |
Preference number: 6 (lower is better) Translates to: FFTEPCLNSHHF*AGPFMWFWIWD Trigger: GTCCCAGATCCAGAACCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | TCCACCCAGTTCTTCACCGAGCCCTGCTTGAACTCCCACCACTTCTaGGCTGGCCCATTCATGTGGTTCTGGATCTGGGACAGCCAATAT | + |
Preference number: 6 (lower is better) Translates to: STQFFTEPCLNSHHF*AGPFMWFWIWDSQY Trigger: ATATTGGCTGTCCCAGATCCAGAACCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAAGAACTGGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | CAGCTCCCGCTGAATGGCTTCACGGGAGAGTGTACCCTCACTGTATaGCAGAAACTCCTTCTTGAACTCCACCCAGTTCTTCACCGAGCC | + |
Preference number: 6 (lower is better) Translates to: QLPLNGFTGECTLTV*QKLLLELHPVLHRA Trigger: GGCTCGGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTTCTGCAATACAGTGAGGGTACACTCTCCCGTGAAGCCATTCAGCGGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 90 bp | AGAAACTCCTTCTTGAACTCCACCCAGTTCTTCACCGAGCCCTGCTaGAACTCCCACCACTTCTTGGCTGGCCCATTCATGTGGTTCTGG | + |
Preference number: 6 (lower is better) Translates to: RNSFLNSTQFFTEPC*NSHHFLAGPFMWFW Trigger: CCAGAACCACATGAATGGGCCAGCCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCGGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |
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CDS CAA 72 bp | CTGAATGGCTTCACGGGAGAGTGTACCCTCACTGTATaGCAGAAACTCCTTCTTGAACTCCACCCAGTTCTT | + |
Preference number: 6 (lower is better) Translates to: LNGFTGECTLTV*QKLLLELHPVL Trigger: AAGAACTGGGTGGAGTTCAAGAAGGAGTTTCTGCAATACAGTGAGGGTACACTCTCCCGTGAAGCCATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023268.14 ENSMUST00000110009.4 |