RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARAP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037999

Ensembl transcript IDs: ENSMUST00000076623.8, ENSMUST00000159470.3

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCAGTGCAGAGTAAGTTCCTCTGAGCAGACACTGACAAAAAGTTaGACTGATGTAGTGAATATGCCCTGGGGCTTATCTACTGACACC +
Preference number: 1 (lower is better)
Translates to: LQCRVSSSEQTLTKS*TDVVNMPWGLSTDT
Trigger: GGTGTCAGTAGATAAGCCCCAGGGCATATTCACTACATCAGTGCAACTTTTTGTCAGTGTCTGCTCAGAGGAACTTACTCTGCACTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CCA 90 bp AAAGACCCCATTGTGATAAATTTGATTCGTACCAAAAATACAGTTTaGAGCCCTAAAGGACTGCCTGCATACAGCAACAGTGCAAATGAT +
Preference number: 1 (lower is better)
Translates to: KDPIVINLIRTKNTV*SPKGLPAYSNSAND
Trigger: ATCATTTGCACTGTTGCTGTATGCAGGCAGTCCTTTAGGGCTCCAAACTGTATTTTTGGTACGAATCAAATTTATCACAATGGGGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CCA 90 bp ATTAGCCCTTATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATaGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCCAGTAAG +
Preference number: 1 (lower is better)
Translates to: ISPYVTIVYEKKRNR*EQFLHSTLRRNSSK
Trigger: CTTACTGGAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATAAGGGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR TCA 90 bp ATGTGTTGTATAAGTAGCCACAGATTGCCCACTTCCAACAGTTACTaGCAGTGCAGAAGTAAACATTATGTTACATTAAGAAATGAAACA +
Preference number: 1 (lower is better)
Translates to: MCCISSHRLPTSNSY*QCRSKHYVTLRNET
Trigger: TGTTTCATTTCTTAATGTAACATAATGTTTACTTCTGCACTGTCAGTAACTGTTGGAAGTGGGCAATCTGTGGCTACTTATACAACACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATACCTCTGAGCAGACACTaGCAAAAAGTTGCACTGATG +
Preference number: 2 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIPLSRH*QKVALM
Trigger: CATCAGTGCAACTTTTTGTCAGTGTCTGCTCAGAGG...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGTATGCCAAAGCACATaGCACATTCTCAACGAGGCC +
Preference number: 2 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNVCQST*HILNEA
Trigger: GGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATAC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAAGGTTTGATTTTTGGTaGATTAGGCCACCTCCATGG +
Preference number: 2 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSERFDFW*IRPPPW
Trigger: CCATGGAGGTGGCCTAATTCACCAAAAATCAAACCT...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACATGGTGCCTTCCTGTaGATAAGTGAAACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEHGAFL*ISETKA
Trigger: AGCCTTTGTTTCACTTATTCACAGGAAGGCACCATG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR CCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAACCAAAAATACAGTTTaGAGCCCTAAAGGACTGCCT +
Preference number: 2 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPITKNTV*SPKGLP
Trigger: AGGCAGTCCTTTAGGGCTCCAAACTGTATTTTTGGT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGACAAAAAGTTGCACTaGTGTAGTGAATATGCCCTG +
Preference number: 2 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPDKKLH*CSEYAL
Trigger: CAGGGCATATTCACTACATCAGTGCAACTTTTTGTC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCAGTGAAACAAAGGCTTaGACTCATAGACCAGACATG +
Preference number: 2 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFSETKA*THRPDM
Trigger: CATGTCTGGTCTATGAGTTCAAGCCTTTGTTTCACT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATAAATGGAATGTGAACTaGCTGCCTGCAAATGTGTTG +
Preference number: 2 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNKWNVN*LPANVL
Trigger: CAACACATTTGCAGGCAGGCAGTTCACATTCCATTT...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR GCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACAGAAACTCAAGAATTaGAGCTTGATTTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEQKLKN*SLISVL
Trigger: CAGGACAGAAATCAAGCTGCAATTCTTGAGTTTCTG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACCAGAGTAAGTTCCTCTaGGCAGACACTGACAAAAAG +
Preference number: 2 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHQSKFL*ADTDKK
Trigger: CTTTTTGTCAGTGTCTGCTCAGAGGAACTTACTCTG...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATACACTGACAAAAAGTTaGACTGATGTAGTGAATATG +
Preference number: 2 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNTLTKS*TDVVNM
Trigger: CATATTCACTACATCAGTGCAACTTTTTGTCAGTGT...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CAA 90 bp AAGATCACCTATATGACTTCCAGTTGTAAGAGTCAACAAACCAACTaGACTTGGAAGCAATCTATAAAAAGCGCCATCTTTAACATGAAC +
Preference number: 2 (lower is better)
Translates to: KITYMTSSCKSQQTN*TWKQSIKSAIFNMN
Trigger: GTTCATGTTAAAGATGGCGCTTTTTATAGATTGCTTCCAAGTCAAGTTGGTTTGTTGACTCTTACAACTGGAAGTCATATAGGTGATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR TCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACCTTCCTGTGAATAAGTaGAACAAAGGCTTGAACTCA +
Preference number: 2 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHLPVNK*NKGLNS
Trigger: TGAGTTCAAGCCTTTGTTTCACTTATTCACAGGAAG...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR GCA 72 bp TTCGTACCAAAAATACAGTTTGGAGCCCTAAAGGACTaGCTGCATACAGCAACAGTGCAAATGATATCCGTG +
Preference number: 3 (lower is better)
Translates to: FVPKIQFGALKD*LHTATVQMISV
Trigger: CACGGATATCATTTGCACTGTTGCTGTATGCAGGCAGTCCTTTAGGGCTCCAAACTGTATTTTTGGTACGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR CAA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACTCAAGAATTGCAGCTaGATTTCTGTCCTGCACATG +
Preference number: 3 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSELKNCS*ISVLHM
Trigger: CATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR CAA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCACAGAAACTCAAGAATaGCAGCTTGATTTCTGTCCT +
Preference number: 3 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFTETQE*QLDFCP
Trigger: AGGACAGAAATCAAGCTGCAATTCTTGAGTTTCTGT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR-3UTR CAA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCAGTCAACAAACCAACTaGACTTGGAAGCAATCTATA +
Preference number: 3 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFSQQTN*TWKQSI
Trigger: TATAGATTGCTTCCAAGTCAAGTTGGTTTGTTGACT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR TCA 72 bp ACAAGTAGGATCTCCATAAAAAGGTTTGATTTTTGGTaGATTAGGCCACCTCCATGGGTAGTGGAATGTTTT +
Preference number: 3 (lower is better)
Translates to: TSRISIKRFDFW*IRPPPWVVECF
Trigger: AAAACATTCCACTACCCATGGAGGTGGCCTAATTCACCAAAAATCAAACCTTTTTATGGAGATCCTACTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CCA 72 bp ATTGTGATAAATTTGATTCGTACCAAAAATACAGTTTaGAGCCCTAAAGGACTGCCTGCATACAGCAACAGT +
Preference number: 3 (lower is better)
Translates to: IVINLIRTKNTV*SPKGLPAYSNS
Trigger: ACTGTTGCTGTATGCAGGCAGTCCTTTAGGGCTCCAAACTGTATTTTTGGTACGAATCAAATTTATCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR GCA 72 bp ACAGACAAATTGATCGAGATACAGAAACTCAAGAATTaGAGCTTGATTTCTGTCCTGCACATGTTGTATACA +
Preference number: 3 (lower is better)
Translates to: TDKLIEIQKLKN*SLISVLHMLYT
Trigger: TGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGTTTCTGTATCTCGATCAATTTGTCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CCA 72 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATaGGAGCAGTTTTTACACTCAACTCTCAGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: YVTIVYEKKRNR*EQFLHSTLRRN
Trigger: ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR TCA 72 bp TTACACATCTACTTTCAAAGGGCTGGCCACTTTAAGTaGCCCAAAGACTTATTAAAGTTAATACAATTGAAC +
Preference number: 3 (lower is better)
Translates to: LHIYFQRAGHFK*PKDLLKLIQLN
Trigger: GTTCAATTGTATTAACTTTAATAAGTCTTTGGGTCACTTAAAGTGGCCAGCCCTTTGAAAGTAGATGTGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCGCCATGTGGGCCCTCTaGCTCGGTGTCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFAMWAL*LGVFQA
Trigger: TGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGC...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATCTTCTCATGGGGCCGTaGACTGGTGAGGACGGAACG +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNLLMGP*TGEDGT
Trigger: CGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAG...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATATTGTGCTCCAAGCAGTaGGCTATGAGGGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPILCSKQ*AMREAR
Trigger: CCGAGCCTCCCTCATAGCCCACTGCTTGGAGCACAA...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAGGCAGCATCCTGACTTaGCCCTCCCTCAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIGSILT*PSLKMS
Trigger: GCTCATTTTGAGGGAGGGTCAAGTCAGGATGCTGCC...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTCCATCTGCAGACTCTaGCCAGCCTTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFSICRL*PAFLAS
Trigger: GCTGGCCAAGAAGGCTGGGCAGAGTCTGCAGATGGA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCACCTTTATAGGCCTTTaGCAGGCCATGTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFTFIGL*QAMWAL
Trigger: GAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCCAGAATGTGTGCCTaGTGTTGGACAGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNSRMCA*CWTVPR
Trigger: TCTGGGGACTGTCCAACATCAGGCACACATTCTGGA...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATATTTCTCCTTGGCTGCTaGAGATCCATAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIFLLGC*RSIEAG
Trigger: GCCTGCTTCTATGGATCTTCAGCAGCCAAGGAGAAA...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATATCCTGGCATCCTTCTTaGAACTCTCCAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPISWHPS*NSPGVH
Trigger: GTGAACTCCTGGAGAGTTTCAAGAAGGATGCCAGGA...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCACCAGCCTGGGACACTTaGGTGTCTTTCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPPAWDT*VSFHLV
Trigger: AACCAAGTGGAAAGACACTCAAGTGTCCCAGGCTGG...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCACAGAGATTGATGGATaGCCAGTCAGGATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFTEIDG*PVRIWG
Trigger: GCCCCAGATCCTGACTGGGCATCCATCAATCTCTGT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATATACTGTGGAGTATTCTaGCTCAGAAGCCGAATCCTG +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIYCGVF*LRSRIL
Trigger: CAGGATTCGGCTTCTGAGTCAGAATACTCCACAGTA...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCCAGTATGCCAGACTGTaGAATCCAACTTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFQYARL*NPTWCA
Trigger: GGCACACCAAGTTGGATTTCACAGTCTGGCATACTG...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGATAGAGCTCCTTCGTaGGGAGAGCGTCATCAATGT +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNDRAPS*GERHQC
Trigger: ACATTGATGACGCTCTCCTCACGAAGGAGCTCTATC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGCTAATGAACTCCACTaGAGCACCTGCTCCAACACA +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNANELH*STCSNT
Trigger: TGTGTTGGAGCAGGTGCTTCAGTGGAGTTCATTAGC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGGGGCTACAGCTGCTTaGAACTGTGATGCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPGATAA*NCDASD
Trigger: ATCACTTGCATCACAGTTGCAAGCAGCTGTAGCCCC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACTCTCTCTCCGAATCTaGTGTGAAGCTGAAACTCCG +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSELSLRI*CEAETP
Trigger: CGGAGTTTCAGCTTCACAGCAGATTCGGAGAGAGAG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTGGGGCTTTACAATCTaGACAGCTCCTGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFWGFTI*TAPVGL
Trigger: GAGTCCAACAGGAGCTGTGCAGATTGTAAAGCCCCA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCGTGGGTGCTGGAAGATaGATCACTGTGTTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFVGAGR*ITVLLL
Trigger: GAGCAACAACACAGTGATCCATCTTCCAGCACCCAC...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATATGTTTCCAGCACATCTaGCTTCACAACTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPICFQHI*LHNCST
Trigger: TGTGCTGCAGTTGTGAAGCCAGATGTGCTGGAAACA...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAATCTGCCCAGCCTTCTTaGCCAGCAGGTAGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKSAQPS*PAGRGY
Trigger: GTACCCCCTACCTGCTGGCCAAGAAGGCTGGGCAGA...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCATGCAGAGACCCAGTATaGATAGAGCTCCTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPCRDPV*IELLRE
Trigger: CTCACGAAGGAGCTCTATCCATACTGGGTCTCTGCA...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAGGTACTGCTCCAAATTaGTGCTCATCAGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIGTAPN*CSSGNL
Trigger: GAGATTTCCTGATGAGCATCAATTTGGAGCAGTACC...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCGATAACTGTGCCTATTaGAGGGGTCCAAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFDNCAY*RGPSRR
Trigger: CCTTCTACTTGGACCCCTTCAATAGGCACAGTTATC...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATAACATGCGTTTTCCTTaGGGAGAGAGTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNNMRFP*GESLSS
Trigger: GCTGGACAAACTCTCTCCTCAAGGAAAACGCATGTT...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCAATTTGTTGTCTCCTTaGGCCCGGACTGTGGATATC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFNLLSP*ARTVDI
Trigger: GATATCCACAGTCCGGGCTCAAGGAGACAACAAATT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGAGAGTCTCTGCTATTaGCTGCTGCACAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNESLCY*LLHSFN
Trigger: ATTGAAGCTGTGCAGCAGTCAATAGCAGAGACTCTC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAGTCACATCTTCAAGTTaGTGTTTCCCAGCTCGCAAC +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEVTSSS*CFPARN
Trigger: GTTGCGAGCTGGGAAACATCAACTTGAAGATGTGAC...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAATCTCATGCTGAGCAATaGAGATACTGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSESHAEQ*RYWPST
Trigger: AGTGGATGGCCAGTATCTTCATTGCTCAGCATGAGA...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTGTCTTCCAGGCAGTTaGAACTGCGATGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFCLPGS*NCDVFW
Trigger: CCAGAAAACATCGCAGTTTCAACTGCCTGGAAGACA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTGCTATTGACTGCTaGACAGCTTCAATCCACTCC +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNSAIDC*TASIHS
Trigger: GGAGTGGATTGAAGCTGTGCAGCAGTCAATAGCAGA...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAGTCTCTGCTATTGACTaGTGCACAGCTTCAATCCAC +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEVSAID*CTASIH
Trigger: GTGGATTGAAGCTGTGCAGCAGTCAATAGCAGAGAC...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTGGGGACGTCATTCTTaGAGAGCTGCTGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNWGRHS*RAADLV
Trigger: TACAAGATCAGCAGCTCTGCAAGAATGACGTCCCCA...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGTTGTTGCTCTTTTGTaGTGCTGCCGTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPVVALL*CCRSLP
Trigger: AGGCAAAGAACGGCAGCACCACAAAAGAGCAACAAC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGCCATCCACTCCATCTaGGCTTGTAAACTGTCACAA +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPAIHSI*ACKLSQ
Trigger: TTGTGACAGTTTACAAGCCCAGATGGAGTGGATGGC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTTTGAACCATTGTGCTaGTTGTTAGCTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFFEPLC*LLAPAV
Trigger: GACTGCAGGAGCTAACAATCAGCACAATGGTTCAAA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTTCTTGCAGAGCTGCTaGTCTTGTAATGCGTTACCA +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFFLQSC*SCNALP
Trigger: TGGTAACGCATTACAAGATCAGCAGCTCTGCAAGAA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATACCGTTCTTTGCCTTATaGACATTTGCATATATGGGG +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIPFFAL*TFAYMG
Trigger: CCCCATATATGCAAATGTGCATAAGGCAAAGAACGG...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGGTGCTGCCGTTCTTTaGCTTATGCACATTTGCATA +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNGAAVL*LMHICI
Trigger: TATGCAAATGTGCATAAGGCAAAGAACGGCAGCACC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATACGATCTATGTTGTCCTaGACACTTCTTACAGATGAC +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIRSMLS*TLLTDD
Trigger: GTCATCTGTAAGAAGTGTGCAGGACAACATAGATCG...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCATCTGGCTTCACAACTaGAGCACACAGAGCCTTATT +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFIWLHN*STQSLI
Trigger: AATAAGGCTCTGTGTGCTGCAGTTGTGAAGCCAGAT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAACGCACACATGACATCTaGTCCACTGAACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKRTHDI*STEQQG
Trigger: GCCCTGCTGTTCAGTGGAGCAGATGTCATGTGTGCG...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAAAATCCAACTTGGTGTaGCCATGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIKSNLV*PWMYSV
Trigger: AACACTGTACATCCATGGGCACACCAAGTTGGATTT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAATCCACATTTCTCCTTaGCTGCTGAAGATCCATAGA +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIIHISP*LLKIHR
Trigger: TCTATGGATCTTCAGCAGCCAAGGAGAAATGTGGAT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAAATTCTTCGTCTTTTTaGAGGTTTCCAGCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPINSSSF*RFPAQK
Trigger: CTTTTGGGCTGGAAACCTTCAAAAAGACGAAGAATT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCCAACACAGGTGCCAGTaGTGTTTTTCAGAATACACA +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFQHRCQ*CFSEYT
Trigger: TGTGTATTCTGAAAAACATCACTGGCACCTGTGTTG...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGGGATTTTTGGTTATTaGACGTTTCCGTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNGIFGY*TFPFLS
Trigger: GGAAAGGAACGGAAACGTTCAATAACCAAAAATCCC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAATTTGTGAAGGGGTCGTaGCCTCTGGAGAACCACACT +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKFVKGS*PLENHT
Trigger: AGTGTGGTTCTCCAGAGGTCACGACCCCTTCACAAA...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAACAGCTCGATCTACTTaGTTCACATTTGCAACATTC +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPITARST*FTFATF
Trigger: GAATGTTGCAAATGTGAAGCAAGTAGATCGAGCTGT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAACCATCTGTACCTGCTaGTTTTTCAATTGCAGTATG +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPITICTC*FFNCSM
Trigger: CATACTGCAATTGAAAAAGCAGCAGGTACAGATGGT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATATCTTGTCGTGTTTGCTaGTCTTTGGATCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPISCRVC*SLDPCK
Trigger: TTTACAAGGATCCAAAGAGCAGCAAACACGACAAGA...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAAGCATTCCTCTACTGTaGAGTATTCTGACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSESIPLL*SILTQK
Trigger: CTTCTGAGTCAGAATACTCCACAGTAGAGGAATGCT...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATAGGGAACAAAACGCTTaGCTATTGTCTCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNREQNA*LLSLSI
Trigger: AATGGACAGAGACAATAGCCAAGCGTTTTGTTCCCT...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGTACTGAGGAAAATCTaGGAACTTGTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPVLRKI*ELVMVE
Trigger: CTCTACCATAACAAGTTCTCAGATTTTCCTCAGTAC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAGGGCATTCATGTGATTaGTTTCTGAGCATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEGHSCD*FLSISE
Trigger: TTCAGAAATGCTCAGAAATCAATCACATGAATGCCC...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAACAACACATCGATCTTaGAATTTATTCCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPITTHRS*NLFPDS
Trigger: ACTGTCTGGGAATAAATTTCAAGATCGATGTGTTGT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTGCCTTATGCACATTTaGATATATGGGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFCLMHI*IYGEVL
Trigger: CAAGACTTCCCCATATATGCAAATGTGCATAAGGCA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGTTTCTTGTAGTGGCTaGTTCCTCTTTAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPVSCSG*FLFNCV
Trigger: AACACAGTTAAAGAGGAAGCAGCCACTACAAGAAAC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCATCTCTTCTGAAACATaGGTTTTCCTTGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFISSET*VFLEER
Trigger: TCTCTCCTCAAGGAAAACGCATGTTTCAGAAGAGAT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCAATCCTGTTCATTTTTaGAAAGCCACACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFNPVHF*KATHCC
Trigger: GCAACAGTGTGTGGCTTTGCAAAAATGAACAGGATT...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTGCTGCTTTTTCAATTaGAGTATGCCAGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNCCFFN*SMPDCE
Trigger: TTCACAGTCTGGCATACTGCAATTGAAAAAGCAGCA...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAAGGAGTTCACTTATGTaGAAAGGATCACCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPRSSLM*KGSPSF
Trigger: AAAGGATGGTGATCCTTTGCACATAAGTGAACTCCT...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACATGATCGAGAAGGTCTaGAAACCAACTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHMIEKV*KPTCSG
Trigger: GCCGGAGCAAGTTGGTTTCCAGACCTTCTCGATCAT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAAGATGGCATTTGAGATaGTTGATGACGGTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPRWHLR*LMTVQY
Trigger: ATACTGAACCGTCATCAACCATCTCAAATGCCATCT...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAATGCCCAGTCAGGATCTaGGGCTTTACAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKCPVRI*GFTICT
Trigger: TGTGCAGATTGTAAAGCCCCAGATCCTGACTGGGCA...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACATTGCTCCAAATACTaGCATCCATTTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEHCSKY*HPFSDF
Trigger: GAAGTCTGAAAATGGATGCCAGTATTTGGAGCAATG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAACCGTTCCTTTCCAGCTaGCGGCCATATATCATTCTC +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKPFLSS*RPYIIL
Trigger: GAGAATGATATATGGCCGCCAGCTGGAAAGGAACGG...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAGGGAATTATTCCTTTTaGGTACATCTCTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEGNYSF*VHLSVI
Trigger: AATGACAGAGAGATGTACTCAAAAGGAATAATTCCC...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAACTGTGGATATCGCCGTaGGGGGAATTATTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKLWISP*GELFLL
Trigger: CAAAAGGAATAATTCCCCTCACGGCGATATCCACAG...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGTTTGTCCCTTAGTTTaGAATAAGCAGGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPVCPLV*NKQDEK
Trigger: CTTTTCATCCTGCTTATTTCAAACTAAGGGACAAAC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCATTAAGATGCCTTCTTTaGTACTTTTCTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPLRCLL*YFSLCT
Trigger: AGTGCAGAGAGAAAAGTATCAAAGAAGGCATCTTAA...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATAAATGTAAGAGGTACTaGTCCAAATTGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNKCKRY*SKLMLI
Trigger: GATGAGCATCAATTTGGAGCAGTACCTCTTACATTT...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACTTCTGAGGTCAAATTaGCTTTTTCTGTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSELLRSN*LFLCVL
Trigger: AAGAACACACAGAAAAAGGCAATTTGACCTCAGAAG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTTAACTGTGTTCTCATaGGGCCAAAACTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFLTVFS*GQNSFF
Trigger: AAAGAATGAGTTTTGGCCGCATGAGAACACAGTTAA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTTTTCAATTGCAGTATaGCAGACTGTGAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFFSIAV*QTVKSN
Trigger: GTTGGATTTCACAGTCTGGCATACTGCAATTGAAAA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACAGTTTCTCATCCTTGTaGTCCAAGCAGTGGGCTATG +
Preference number: 4 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHSFSSL*SKQWAM
Trigger: CATAGCCCACTGCTTGGAGCACAAGGATGAGAAACT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAATTTCTTCTTAAACTCTaGAAGCATTCCTCTACTGTG +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEFLLKL*KHSSTV
Trigger: CACAGTAGAGGAATGCTTCCAGAGTTTAAGAAGAAA...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGTGTTTGCTGCTCTTTaGATCCTTGTAAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNVFAAL*ILVNKE
Trigger: CTCTTTATTTACAAGGATCCAAAGAGCAGCAAACAC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGCATTTCTCTCATGTTaGATAGGAATCAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPAFLSC*IGIRGK
Trigger: TTTACCTCTGATTCCTATCCAACATGAGAGAAATGC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CAA 72 bp TTAAGCTTTTCTTCCCTCAAAACACAATATCTTGCTTaGAAGGAAGGATCTTCGGTAGTGCCACCAAATCCT +
Preference number: 4 (lower is better)
Translates to: LSFSSLKTQYLA*KEGSSVVPPNP
Trigger: AGGATTTGGTGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGAAAAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAATAGCTCCCTGGAATTaGTTTTGTAGACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKIAPWN*FCRPWD
Trigger: ATCCCAGGGTCTACAAAATCAATTCCAGGGAGCTAT...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAGTTGCTCTTTTGTGGTaGTGCCGTTCTTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKVALLW*CRSLPY
Trigger: ATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAAC...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAATCATATATGCTTGACTaGGTTAGGATAGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSESYMLD*VRIEFL
Trigger: AAGAAACTCTATCCTAACCCAGTCAAGCATATATGA...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACAGGCATAGGGAGAGATaGCATTTGAGATGGTTGATG +
Preference number: 4 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHRHRER*HLRWLM
Trigger: CATCAACCATCTCAAATGCCATCTCTCCCTATGCCT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAGGTGATATTCCAATCTaGTGGAGTACGCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKGDIPI*WSTLSF
Trigger: AAATGACAGCGTACTCCATCAGATTGGAATATCACC...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR TCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAACTTGCTGGAATCTTCTaGGGTCAAATTGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKLAGIF*GQIAFF
Trigger: GAAAAAGGCAATTTGACCTCAGAAGATTCCAGCAAG...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAACTGATTGTTAGCTCCTaGAGTCTTCTTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKLIVSS*SLLRFI
Trigger: GATGAACCTAAGAAGACTGCAGGAGCTAACAATCAG...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACACATCTTGTCGTGTTTaGTGCTCTTTGGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHTSCRV*CSLDPC
Trigger: ACAAGGATCCAAAGAGCAGCAAACACGACAAGATGT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CAA 72 bp TACAGACAAATTGATCGAGATACAGAAACTCAAGAATaGCAGCTTGATTTCTGTCCTGCACATGTTGTATAC +
Preference number: 4 (lower is better)
Translates to: YRQIDRDTETQE*QLDFCPAHVVY
Trigger: GTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGTTTCTGTATCTCGATCAATTTGTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR GCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACAGAAGCCGAATCCTGTaGAAGGTTATTTTTATCCTC +
Preference number: 4 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHRSRIL*KVIFIL
Trigger: GAGGATAAAAATAACCTTGCACAGGATTCGGCTTCT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CCA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTTTCAAAGACAAAGATaGGCCCAGTATTCAGATAGA +
Preference number: 4 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHFQRQR*AQYSDR
Trigger: TCTATCTGAATACTGGGCCCATCTTTGTCTTTGAAA...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CAA 72 bp TATATGACTTCCAGTTGTAAGAGTCAACAAACCAACTaGACTTGGAAGCAATCTATAAAAAGCGCCATCTTT +
Preference number: 4 (lower is better)
Translates to: YMTSSCKSQQTN*TWKQSIKSAIF
Trigger: AAAGATGGCGCTTTTTATAGATTGCTTCCAAGTCAAGTTGGTTTGTTGACTCTTACAACTGGAAGTCATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
3UTR CAA 72 bp AGGTATAGACAAACAACTTGCTTAAATACAGACAAATaGATCGAGATACAGAAACTCAAGAATTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RYRQTTCLNTDK*IEIQKLKNCSL
Trigger: CAAGCTGCAATTCTTGAGTTTCTGTATCTCGATCAATTTGTCTGTATTTAAGCAAGTTGTTTGTCTATACCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp GTAGGGGGTACTGTGCACGGGGTCTCCTGTCGCACACATGACATCTaGTCCACTGAACAGCAGGGCCATTGTTTCCAGCACATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: VGGTVHGVSCRTHDI*STEQQGHCFQHIWL
Trigger: AAGCCAGATGTGCTGGAAACAATGGCCCTGCTGTTCAGTGGAGCAGATGTCATGTGTGCGACAGGAGACCCCGTGCACAGTACCCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp TGTCTTCGGACCTTTATAGGCCTTTGGCAGGCCATGTGGGCCCTCTaGCTCGGTGTCTTCCAGGCAGTTGAAACTGCGATGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: CLRTFIGLWQAMWAL*LGVFQAVETAMFSG
Trigger: GCCAGAAAACATCGCAGTTTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp CGAGAAGGTCTGGAAACCAACTTGCTCCGGCTTCTCATGGGGCCGTaGACTGGTGAGGACGGAACGTACAGTTCATTCACAACCATCTCG +
Preference number: 5 (lower is better)
Translates to: REGLETNLLRLLMGP*TGEDGTYSSFTTIS
Trigger: CGAGATGGTTGTGAATGAACTGTACGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGACCTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp CTTCTTCAGTGTCTTCGGACCTTTATAGGCCTTTGGCAGGCCATGTaGGCCCTCTGCCTCGGTGTCTTCCAGGCAGTTGAAACTGCGATG +
Preference number: 5 (lower is better)
Translates to: LLQCLRTFIGLWQAM*ALCLGVFQAVETAM
Trigger: CATCGCAGTTTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACACTGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp TCTGGAAACCAACTTGCTCCGGCTTCTCATGGGGCCGTGGACTGGTaGGGACGGAACGTACAGTTCATTCACAACCATCTCGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SGNQLAPASHGAVDW*GRNVQFIHNHLALK
Trigger: TTTCAGGGCGAGATGGTTGTGAATGAACTGTACGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp TTGGCAGGCCATGTGGGCCCTCTGCCTCGGTGTCTTCCAGGCAGTTaGAACTGCGATGTTTTCTGGCACGATTTCGGAGTTTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: LAGHVGPLPRCLPGS*NCDVFWHDFGVSHP
Trigger: AGGATGAGAAACTCCGAAATCGTGCCAGAAAACATCGCAGTTTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp GTCTCGAGGATCGTGCTTTTCACTCAGCCGCAGCCTTTCAAGCTCTaGTCTGGCCGTCTCAATATTCTTACGGGCCTGGGTCGCATTTCT +
Preference number: 5 (lower is better)
Translates to: VSRIVLFTQPQPFKL*SGRLNILTGLGRIS
Trigger: AGAAATGCGACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCTTGAAAGGCTGCGGCTGAGTGAAAAGCACGATCCTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp TCTCTGGTACAGGGCGATGTCTCAGTAGAAATGATCGAGAAGGTCTaGAAACCAACTTGCTCCGGCTTCTCATGGGGCCGTGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: SLVQGDVSVEMIEKV*KPTCSGFSWGRGLV
Trigger: CACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGACCTTCTCGATCATTTCTACTGAGACATCGCCCTGTACCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp TCTTTCCTCTGTCTTCTTCAGTGTCTTCGGACCTTTATAGGCCTTTaGCAGGCCATGTGGGCCCTCTGCCTCGGTGTCTTCCAGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SFLCLLQCLRTFIGL*QAMWALCLGVFQAV
Trigger: AACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACACTGAAGAAGACAGAGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp GAGGATCGTGCTTTTCACTCAGCCGCAGCCTTTCAAGCTCTGCTCTaGCCGTCTCAATATTCTTACGGGCCTGGGTCGCATTTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: EDRAFHSAAAFQALL*PSQYSYGPGSHFSH
Trigger: ATGAGAGAAATGCGACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCTTGAAAGGCTGCGGCTGAGTGAAAAGCACGATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp GCGGGAAGCTTTCTAATACGCCATTCGTCCCGTTTCCAGAATGTGTaGCTGATGTTGGACAGTCCCCAGAGGGAAGACATTCAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: AGSFLIRHSSRFQNV*LMLDSPQREDIQCL
Trigger: CAAACACTGAATGTCTTCCCTCTGGGGACTGTCCAACATCAGGCACACATTCTGGAAACGGGACGAATGGCGTATTAGAAAGCTTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp TTTCTGGCACGATTTCGGAGTTTCTCATCCTTGTGCTCCAAGCAGTaGGCTATGAGGGAGGCTCGGTCTTTTAAGCTGGAGTCCGTAAAG +
Preference number: 5 (lower is better)
Translates to: FLARFRSFSSLCSKQ*AMREARSFKLESVK
Trigger: CTTTACGGACTCCAGCTTAAAAGACCGAGCCTCCCTCATAGCCCACTGCTTGGAGCACAAGGATGAGAAACTCCGAAATCGTGCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp CACTCTATGCCGGTGTGGGTGCTGGAAGATGGATCACTGTGTTGTTaGTCTTTTGTGGTGCTGCCGTTCTTTGCCTTATGCACATTTGCA +
Preference number: 5 (lower is better)
Translates to: HSMPVWVLEDGSLCC*SFVVLPFFALCTFA
Trigger: TGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCACCCACACCGGCATAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS GCA 90 bp AAACTGCGATGTTTTCTGGCACGATTTCGGAGTTTCTCATCCTTGTaGTCCAAGCAGTGGGCTATGAGGGAGGCTCGGTCTTTTAAGCTG +
Preference number: 5 (lower is better)
Translates to: KLRCFLARFRSFSSL*SKQWAMREARSFKL
Trigger: CAGCTTAAAAGACCGAGCCTCCCTCATAGCCCACTGCTTGGAGCACAAGGATGAGAAACTCCGAAATCGTGCCAGAAAACATCGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAGACCTTTATAGGCCTTaGGCAGGCCATGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIDLYRP*AGHVGP
Trigger: AGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTC...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp AGACTGACAGTTTCCTTCACTAAGGGTACTGGTTGTAACCATCTCTaGTGGTGCCGGGCCAGGTCTATGGACAGTAATGGAATCGGAACA +
Preference number: 5 (lower is better)
Translates to: RLTVSFTKGTGCNHL*WCRARSMDSNGIGT
Trigger: TGTTCCGATTCCATTACTGTCCATAGACCTGGCCCGGCACCATCAGAGATGGTTACAACCAGTACCCTTAGTGAAGGAAACTGTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp CTTGTGTATCTAATGCAGAGACCCAGTATGGATAGAGCTCCTTCGTaGGGAGAGCGTCATCAATGTCCGACAGAAAACTCTTCAGCACGC +
Preference number: 5 (lower is better)
Translates to: LVYLMQRPSMDRAPS*GERHQCPTENSSAR
Trigger: GCGTGCTGAAGAGTTTTCTGTCGGACATTGATGACGCTCTCCTCACGAAGGAGCTCTATCCATACTGGGTCTCTGCATTAGATACACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp GTTCCTTTCCAGCTGGCGGCCATATATCATTCTCATGCTGAGCAATaGAGATACTGGCCATCCACTCCATCTGGGCTTGTAAACTGTCAC +
Preference number: 5 (lower is better)
Translates to: VPFQLAAIYHSHAEQ*RYWPSTPSGLVNCH
Trigger: GTGACAGTTTACAAGCCCAGATGGAGTGGATGGCCAGTATCTTCATTGCTCAGCATGAGAATGATATATGGCCGCCAGCTGGAAAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp CGTTTCCGTTCCTTTCCAGCTGGCGGCCATATATCATTCTCATGCTaGGCAATGAAGATACTGGCCATCCACTCCATCTGGGCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: RFRSFPAGGHISFSC*AMKILAIHSIWACK
Trigger: TTTACAAGCCCAGATGGAGTGGATGGCCAGTATCTTCATTGCTCAGCATGAGAATGATATATGGCCGCCAGCTGGAAAGGAACGGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp TTGTCCTGCACACTTCTTACAGATGACGACACAGAGATTGATGGATaGCCAGTCAGGATCTGGGGCTTTACAATCTGCACAGCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LSCTLLTDDDTEIDG*PVRIWGFTICTAPV
Trigger: AACAGGAGCTGTGCAGATTGTAAAGCCCCAGATCCTGACTGGGCATCCATCAATCTCTGTGTCGTCATCTGTAAGAAGTGTGCAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp CGGTGTGGGTGCTGGAAGATGGATCACTGTGTTGTTGCTCTTTTGTaGTGCTGCCGTTCTTTGCCTTATGCACATTTGCATATATGGGGA +
Preference number: 5 (lower is better)
Translates to: RCGCWKMDHCVVALL*CCRSLPYAHLHIWG
Trigger: TCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCACCCACACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 90 bp TCTCCTTGGCTGCTGAAGATCCATAGAAGCAGGCATAGGGAGAGATaGCATTTGAGATGGTTGATGACGGTTCAGTATTTCCACTCGTGG +
Preference number: 5 (lower is better)
Translates to: SPWLLKIHRSRHRER*HLRWLMTVQYFHSW
Trigger: CCACGAGTGGAAATACTGAACCGTCATCAACCATCTCAAATGCCATCTCTCCCTATGCCTGCTTCTATGGATCTTCAGCAGCCAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp GTTTTCCTTGAGGAGAGAGTTTGTCCAGCCATCCACATTTCTCCTTaGCTGCTGAAGATCCATAGAAGCAGGCATAGGGAGAGATGGCAT +
Preference number: 5 (lower is better)
Translates to: VFLEERVCPAIHISP*LLKIHRSRHRERWH
Trigger: ATGCCATCTCTCCCTATGCCTGCTTCTATGGATCTTCAGCAGCCAAGGAGAAATGTGGATGGCTGGACAAACTCTCTCCTCAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp AGCCTTTCAAGCTCTGCTCTGGCCGTCTCAATATTCTTACGGGCCTaGGTCGCATTTCTCTCATGTTGGATAGGAATCAGAGGTAAACCT +
Preference number: 5 (lower is better)
Translates to: SLSSSALAVSIFLRA*VAFLSCWIGIRGKP
Trigger: AGGTTTACCTCTGATTCCTATCCAACATGAGAGAAATGCGACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCTTGAAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAGCAAGTGTTGCTCTGTaGACCCCAGGAAGAGAGCGT +
Preference number: 5 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIASVAL*TPGRER
Trigger: ACGCTCTCTTCCTGGGGTCAACAGAGCAACACTTGC...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp TGTTTCAGTATCCTCCTACGGTGTCCAGTAGGTGATATTCCAATCTaGTGGAGTACGCTGTCATTTATCGACGTGCAGTCCCTCACGGTA +
Preference number: 5 (lower is better)
Translates to: CFSILLRCPVGDIPI*WSTLSFIDVQSLTV
Trigger: TACCGTGAGGGACTGCACGTCGATAAATGACAGCGTACTCCATCAGATTGGAATATCACCTACTGGACACCGTAGGAGGATACTGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS TCA 90 bp ATGTCCGACAGAAAACTCTTCAGCACGCCTGTCACATCTTCAAGTTaGTGTTTCCCAGCTCGCAACTTAACACTCCTGGCATCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: MSDRKLFSTPVTSSS*CFPARNLTLLASFL
Trigger: CAAGAAGGATGCCAGGAGTGTTAAGTTGCGAGCTGGGAAACATCAACTTGAAGATGTGACAGGCGTGCTGAAGAGTTTTCTGTCGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp GGGTGCTGGAAGATGGATCACTGTGTTGTTGCTCTTTTGTGGTGCTaGCGTTCTTTGCCTTATGCACATTTGCATATATGGGGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: GCWKMDHCVVALLWC*RSLPYAHLHIWGSL
Trigger: AAGACTTCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS GCA 90 bp TGTGGGTGCTGGAAGATGGATCACTGTGTTGTTGCTCTTTTGTGGTaGTGCCGTTCTTTGCCTTATGCACATTTGCATATATGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: CGCWKMDHCVVALLW*CRSLPYAHLHIWGS
Trigger: ACTTCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 90 bp CTGAAGATCCATAGAAGCAGGCATAGGGAGAGATGGCATTTGAGATaGTTGATGACGGTTCAGTATTTCCACTCGTGGAGCTTAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LKIHRSRHRERWHLR*LMTVQYFHSWSLKD
Trigger: ATCCTTTAAGCTCCACGAGTGGAAATACTGAACCGTCATCAACCATCTCAAATGCCATCTCTCCCTATGCCTGCTTCTATGGATCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp GCCGTCTCAATATTCTTACGGGCCTGGGTCGCATTTCTCTCATGTTaGATAGGAATCAGAGGTAAACCTCCAATCTTGGGATTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AVSIFLRAWVAFLSC*IGIRGKPPILGFLV
Trigger: AACCAAAAATCCCAAGATTGGAGGTTTACCTCTGATTCCTATCCAACATGAGAGAAATGCGACCCAGGCCCGTAAGAATATTGAGACGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTGGATCACTGTGTTGTaGCTCTTTTGTGGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNWITVL*LFCGAA
Trigger: GGCAGCACCACAAAAGAGCAACAACACAGTGATCCA...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAACTGTGAAATCCAACTaGGTGTGCCCATGGATGTAC +
Preference number: 5 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPITVKSN*VCPWMY
Trigger: GTACATCCATGGGCACACCAAGTTGGATTTCACAGT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATCTCCTGGCATCCTTCTaGAAACTCTCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNLLASF*KLSRSS
Trigger: TGAACTCCTGGAGAGTTTCAAGAAGGATGCCAGGAG...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAAGGGAGAGATGGCATTaGAGATGGTTGATGACGGTT +
Preference number: 5 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPRERWH*RWLMTV
Trigger: AACCGTCATCAACCATCTCAAATGCCATCTCTCCCT...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAAGAGAGTCTCTGCTATaGACTGCTGCACAGCTTCAA +
Preference number: 5 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPRESLL*TAAQLQ
Trigger: TTGAAGCTGTGCAGCAGTCAATAGCAGAGACTCTCT...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATACTGAGCTTCTTGCGTTaGAAGGCAAAAACACAAGCT +
Preference number: 5 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPILSFLR*KAKTQA
Trigger: AGCTTGTGTTTTTGCCTTCAAACGCAAGAAGCTCAG...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAGCGTCTAAGGTAGCTTaGCTGTTTCTTTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPASKVA*LFLSSV
Trigger: GACAGAGGAAAGAAACAGCAAAGCTACCTTAGACGC...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp CCTCTCAATTCAAGATATCCACATTTCTCAGGGGCTACAGCTGCTTaGAACTGTGATGCAAGTGATGGTGACTTCAGTGCACTTAATAAT +
Preference number: 5 (lower is better)
Translates to: PLNSRYPHFSGATAA*NCDASDGDFSALNN
Trigger: ATTATTAAGTGCACTGAAGTCACCATCACTTGCATCACAGTTGCAAGCAGCTGTAGCCCCTGAGAAATGTGGATATCTTGAATTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAAAATTTGTTGTCTCCTaGAGCCCGGACTGTGGATAT +
Preference number: 5 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEKFVVS*SPDCGY
Trigger: ATATCCACAGTCCGGGCTCAAGGAGACAACAAATTT...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAATCTGCACAGCTCCTGTaGGACTCATTAAACCAAATC +
Preference number: 5 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSESAQLL*DSLNQI
Trigger: GATTTGGTTTAATGAGTCCAACAGGAGCTGTGCAGA...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAGGGCAGCATCCTGACTaGACCCTCCCTCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKGQHPD*TLPQNE
Trigger: CTCATTTTGAGGGAGGGTCAAGTCAGGATGCTGCCC...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCTGTCACATCTTCAAGTaGATGTTTCCCAGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFCHIFK*MFPSSQ
Trigger: TTGCGAGCTGGGAAACATCAACTTGAAGATGTGACA...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATAAGGATGAAAAGACCATaGCCAAGTTATGGGCATTCA +
Preference number: 5 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIRMKRP*PSYGHS
Trigger: TGAATGCCCATAACTTGGCAATGGTCTTTTCATCCT...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATAACATCTTGTCGTGTTaGCTGCTCTTTGGATCCTTG +
Preference number: 5 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNNILSC*LLFGSL
Trigger: CAAGGATCCAAAGAGCAGCAAACACGACAAGATGTT...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp TTTCAAATTTGTTGTCTCCTTGAGCCCGGACTGTGGATATCGCCGTaGGGGGAATTATTCCTTTTGAGTACATCTCTCTGTCATTATTGT +
Preference number: 5 (lower is better)
Translates to: FQICCLLEPGLWISP*GELFLLSTSLCHYC
Trigger: ACAATAATGACAGAGAGATGTACTCAAAAGGAATAATTCCCCTCACGGCGATATCCACAGTCCGGGCTCAAGGAGACAACAAATTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATCACAGCTCGATCTACTaGCTTCACATTTGCAACATT +
Preference number: 5 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNHSSIY*LHICNI
Trigger: AATGTTGCAAATGTGAAGCAAGTAGATCGAGCTGTG...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAATCCAGCCTGGGACACTaGAGTGTCTTTCCACTTGGT +
Preference number: 5 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKSSLGH*SVFPLG
Trigger: ACCAAGTGGAAAGACACTCAAGTGTCCCAGGCTGGA...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GGAATTCCAGTAAGGTATGCCAAAGCACATGACACATTCTCAACGAGGCCAATACCAATCTTGGGATTTTaGGTTATTGAACGTTTCCGT +
Preference number: 5 (lower is better)
Translates to: GIPVRYAKAHDTFSTRPIPILGF*VIERFR
Trigger: ACGGAAACGTTCAATAACCAAAAATCCCAAGATTGG...TATTGGCCTCGTTGAGAATGTGTCATGTGCTTTGGCATACCTTACTGGAATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp ACAAAAGTCCTTTGTGTTGTAACAATTTCAAATTTGTTGTCTCCTTaGGCCCGGACTGTGGATATCGCCGTGAGGGGAATTATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: TKVLCVVTISNLLSP*ARTVDIAVRGIIPF
Trigger: AAAAGGAATAATTCCCCTCACGGCGATATCCACAGTCCGGGCTCAAGGAGACAACAAATTTGAAATTGTTACAACACAAAGGACTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp CCAAATACTGGCATCCATTTTCAGACTTCTAACTTTAGAGTCTTTTaGTCCCAACGATCTATGTTGTCCTGCACACTTCTTACAGATGAC +
Preference number: 5 (lower is better)
Translates to: PNTGIHFQTSNFRVF*SQRSMLSCTLLTDD
Trigger: GTCATCTGTAAGAAGTGTGCAGGACAACATAGATCGTTGGGACCAAAAGACTCTAAAGTTAGAAGTCTGAAAATGGATGCCAGTATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCCAAATGTCTTCGACTTaGTCTTCACTCACTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFQMSST*SSLTFS
Trigger: GGAAAAAGTGAGTGAAGACAAAGTCGAAGACATTTG...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAAAATCCTGTTCATTTTaGCAAAGCCACACACTGTTG +
Preference number: 5 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPKSCSF*QSHTLL
Trigger: CAACAGTGTGTGGCTTTGCAAAAATGAACAGGATTT...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCACTCTGTCCATTTTCTTaGAATCTGAGATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPLCPFS*NLRCFS
Trigger: GCTGAAACATCTCAGATTCAAAGAAAATGGACAGAG...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAACAAAACGCTTGGCTATaGTCTCTGTCCATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEQNAWL*SLSIFF
Trigger: AAAGAAAATGGACAGAGACAATAGCCAAGCGTTTTG...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TCTTCCCTCAAAACACAATATCTTGCTTTGAAGGAAGGATCTTCGGTAGTGCCAATAAAGGCTCTGTACTaGCTAGTTCTCTCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SSLKTQYLALKEGSSVVPIKALY*LVLSFS
Trigger: TGAAAAGGAGAGAACTAGCAAGTACAGAGCCTTTAT...TGGCACTACCGAAGATCCTTCCTTCAAAGCAAGATATTGTGTTTTGAGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp AGCAGGATGAAAAGACCATTGCCAAGTTATGGGCATTCATGTGATTaGTTTCTGAGCATTTCTGAACCCTGTAAAGGTGTTCAATTAGAG +
Preference number: 5 (lower is better)
Translates to: SRMKRPLPSYGHSCD*FLSISEPCKGVQLE
Trigger: CTCTAATTGAACACCTTTACAGGGTTCAGAAATGCTCAGAAATCAATCACATGAATGCCCATAACTTGGCAATGGTCTTTTCATCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp ATAGAGTTTCTTGTAGTGGCTGCTTCCTCTTTAACTGTGTTCTCATaGGGCCAAAACTCATTCTTTATAGATCGCTTCTTGGAACTTTCT +
Preference number: 5 (lower is better)
Translates to: IEFLVVAASSLTVFS*GQNSFFIDRFLELS
Trigger: AGAAAGTTCCAAGAAGCGATCTATAAAGAATGAGTTTTGGCCGCATGAGAACACAGTTAAAGAGGAAGCAGCCACTACAAGAAACTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp ACATTTACACCACCAAATAAAGAATCTTTCGAAGAATCCACGTTCTaGTGTAGTTCTTCTTCTGGACAGAGCAGGTCATGTGAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TFTPPNKESFEESTF*CSSSSGQSRSCEER
Trigger: TCTTTCTTCACATGACCTGCTCTGTCCAGAAGAAGAACTACACCAGAACGTGGATTCTTCGAAAGATTCTTTATTTGGTGGTGTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAACTGAAAGAACGGGGTaGGCGGGAAGCTTTCTAATA +
Preference number: 5 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKTERTG*AGSFLI
Trigger: TATTAGAAAGCTTCCCGCCAACCCCGTTCTTTCAGT...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACCAAAGCCACACACTGTaGCCCCTTAACACGGTAAAA +
Preference number: 5 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHQSHTL*PLNTVK
Trigger: TTTTACCGTGTTAAGGGGCAACAGTGTGTGGCTTTG...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp AAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATTCCTACTTGCTTCACATTaGCAACATTCATGGGAATTA +
Preference number: 5 (lower is better)
Translates to: KEEEQMGAVFTLNSQEEFLLASH*QHSWEL
Trigger: TAATTCCCATGAATGTTGCAAATGTGAAGCAAGTAG...GAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp CTGGTAAACTCCGCTATCTTCAACAAGTACATGGGGTTAGCATATCTGAGTGAAGTCCATTTGTTTGACTaGGTCTTCTTTAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: LVNSAIFNKYMGLAYLSEVHLFD*VFFNLK
Trigger: TTTGAGGTTAAAGAAGACCAAGTCAAACAAATGGAC...TTCACTCAGATATGCTAACCCCATGTACTTGTTGAAGATAGCGGAGTTTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp GAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTCAACTCTCAGGAGGAATGGTAAACCTCCAATCTaGGGATTTTTGGTTATTGAA +
Preference number: 5 (lower is better)
Translates to: EKKRNRWEQFLHSTLRRNGKPPI*GFLVIE
Trigger: TTCAATAACCAAAAATCCCAAGATTGGAGGTTTACC...ATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAGTGTCTTCCAGGCAGTaGAAACTGCGATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKVSSRQ*KLRCFL
Trigger: CAGAAAACATCGCAGTTTCAACTGCCTGGAAGACAC...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 90 bp TTGTCTTCACTCACTTTTTCCTTCCTGTTATCATATATGCTTGACTaGGTTAGGATAGAGTTTCTTGTAGTGGCTGCTTCCTCTTTAACT +
Preference number: 5 (lower is better)
Translates to: LSSLTFSFLLSYMLD*VRIEFLVVAASSLT
Trigger: AGTTAAAGAGGAAGCAGCCACTACAAGAAACTCTATCCTAACCCAGTCAAGCATATATGATAACAGGAAGGAAAAAGTGAGTGAAGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACAAACACAAGCTAGACTaGTCCATAGCAAACCAGCCT +
Preference number: 5 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHKHKLD*SIANQP
Trigger: AGGCTGGTTTGCTATGGACAAGTCTAGCTTGTGTTT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 90 bp TATCTCAAAAGACTGTTTCACAGCTCGATCTACTTGCTTCACATTTaGAACATTCATGGGAATTATGGTAATACCGAGTCCACTCTTAAA +
Preference number: 5 (lower is better)
Translates to: YLKRLFHSSIYLLHI*NIHGNYGNTESTLK
Trigger: TTTAAGAGTGGACTCGGTATTACCATAATTCCCATGAATGTTGCAAATGTGAAGCAAGTAGATCGAGCTGTGAAACAGTCTTTTGAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 90 bp AGATCTTCAATTACATTGACTTCTTCACTAGTTTGTCCCTTAGTTTaGAATAAGCAGGATGAAAAGACCATTGCCAAGTTATGGGCATTC +
Preference number: 5 (lower is better)
Translates to: RSSITLTSSLVCPLV*NKQDEKTIAKLWAF
Trigger: GAATGCCCATAACTTGGCAATGGTCTTTTCATCCTGCTTATTTCAAACTAAGGGACAAACTAGTGAAGAAGTCAATGTAATTGAAGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp ACTCAAGAATTGCAGCTTGATTTCTGTCCTGCACATGTTGTATACAATGTTAAAGTCTTTGTAGAAGAGTaGACCAATCAGATCATAGTC +
Preference number: 5 (lower is better)
Translates to: TQELQLDFCPAHVVYNVKVFVEE*TNQIIV
Trigger: GACTATGATCTGATTGGTCAACTCTTCTACAAAGAC...TTTAACATTGTATACAACATGTGCAGGACAGAAATCAAGCTGCAATTCTTGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTGGGATTTTTGGTTATaGAACGTTTCCGTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHWDFWL*NVSVPF
Trigger: GAAAGGAACGGAAACGTTCAATAACCAAAAATCCCA...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACTTTAAGATGCCTTCTTaGATACTTTTCTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHFKMPS*ILFSLH
Trigger: GTGCAGAGAGAAAAGTATCAAAGAAGGCATCTTAAA...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS-3UTR CAA 90 bp TATGTGACAATTGTTTATGAAAAGAAGAGGAACAGATGGGAGCAGTTTTTACACAACAACACATCGATCTaGAAATTTATTCCCAGACAG +
Preference number: 5 (lower is better)
Translates to: YVTIVYEKKRNRWEQFLHNNTSI*KFIPRQ
Trigger: CTGTCTGGGAATAAATTTCAAGATCGATGTGTTGTT...GTGTAAAAACTGCTCCCATCTGTTCCTCTTCTTTTCATAAACAATTGTCACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp GGGCGATGTCTCAGTAGAAATGATCGAGAAGGTCTGGAAACCAACTaGCTCCGGCTTCTCATGGGGCCGTGGACTGGTGAGGACGGAACG +
Preference number: 6 (lower is better)
Translates to: GRCLSRNDREGLETN*LRLLMGPWTGEDGT
Trigger: CGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGACCTTCTCGATCATTTCTACTGAGACATCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp ACTGTGCACGGGGTCTCCTGTCGCACACATGACATCTaGTCCACTGAACAGCAGGGCCATTGTTTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: TVHGVSCRTHDI*STEQQGHCFQH
Trigger: GTGCTGGAAACAATGGCCCTGCTGTTCAGTGGAGCAGATGTCATGTGTGCGACAGGAGACCCCGTGCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp ACCTTTATAGGCCTTTGGCAGGCCATGTGGGCCCTCTaGCTCGGTGTCTTCCAGGCAGTTGAAACTGCGATG +
Preference number: 6 (lower is better)
Translates to: TFIGLWQAMWAL*LGVFQAVETAM
Trigger: CATCGCAGTTTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp GAGAAGGTCTGGAAACCAACTTGCTCCGGCTTCTCATaGGGCCGTGGACTGGTGAGGACGGAACGTACAGTT +
Preference number: 6 (lower is better)
Translates to: EKVWKPTCSGFS*GRGLVRTERTV
Trigger: AACTGTACGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGACCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp TGTCTTCGGACCTTTATAGGCCTTTGGCAGGCCATGTaGGCCCTCTGCCTCGGTGTCTTCCAGGCAGTTGAA +
Preference number: 6 (lower is better)
Translates to: CLRTFIGLWQAM*ALCLGVFQAVE
Trigger: TTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp CAACTTGCTCCGGCTTCTCATGGGGCCGTGGACTGGTaGGGACGGAACGTACAGTTCATTCACAACCATCTC +
Preference number: 6 (lower is better)
Translates to: QLAPASHGAVDW*GRNVQFIHNHL
Trigger: GAGATGGTTGTGAATGAACTGTACGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp CTGGAAACCAACTTGCTCCGGCTTCTCATGGGGCCGTaGACTGGTGAGGACGGAACGTACAGTTCATTCACA +
Preference number: 6 (lower is better)
Translates to: LETNLLRLLMGP*TGEDGTYSSFT
Trigger: TGTGAATGAACTGTACGTTCCGTCCTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp GCTTTTCACTCAGCCGCAGCCTTTCAAGCTCTGCTCTaGCCGTCTCAATATTCTTACGGGCCTGGGTCGCAT +
Preference number: 6 (lower is better)
Translates to: AFHSAAAFQALL*PSQYSYGPGSH
Trigger: ATGCGACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCTTGAAAGGCTGCGGCTGAGTGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp TGTCTTCTTCAGTGTCTTCGGACCTTTATAGGCCTTTaGCAGGCCATGTGGGCCCTCTGCCTCGGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: CLLQCLRTFIGL*QAMWALCLGVF
Trigger: GAAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACACTGAAGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp CCATGTGGGCCCTCTGCCTCGGTGTCTTCCAGGCAGTaGAAACTGCGATGTTTTCTGGCACGATTTCGGAGT +
Preference number: 6 (lower is better)
Translates to: PCGPSASVSSRQ*KLRCFLARFRS
Trigger: ACTCCGAAATCGTGCCAGAAAACATCGCAGTTTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp CTGTCTTCTTCAGTGTCTTCGGACCTTTATAGGCCTTaGGCAGGCCATGTGGGCCCTCTGCCTCGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: LSSSVSSDLYRP*AGHVGPLPRCL
Trigger: AAGACACCGAGGCAGAGGGCCCACATGGCCTGCCAAAGGCCTATAAAGGTCCGAAGACACTGAAGAAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp CATGTGGGCCCTCTGCCTCGGTGTCTTCCAGGCAGTTaGAACTGCGATGTTTTCTGGCACGATTTCGGAGTT +
Preference number: 6 (lower is better)
Translates to: HVGPLPRCLPGS*NCDVFWHDFGV
Trigger: AACTCCGAAATCGTGCCAGAAAACATCGCAGTTTCAACTGCCTGGAAGACACCGAGGCAGAGGGCCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp ATCGTGCTTTTCACTCAGCCGCAGCCTTTCAAGCTCTaGTCTGGCCGTCTCAATATTCTTACGGGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: IVLFTQPQPFKL*SGRLNILTGLG
Trigger: ACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCTTGAAAGGCTGCGGCTGAGTGAAAAGCACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp CTCAGTAGAAATGATCGAGAAGGTCTGGAAACCAACTaGCTCCGGCTTCTCATGGGGCCGTGGACTGGTGAG +
Preference number: 6 (lower is better)
Translates to: LSRNDREGLETN*LRLLMGPWTGE
Trigger: CTCACCAGTCCACGGCCCCATGAGAAGCCGGAGCAAGTTGGTTTCCAGACCTTCTCGATCATTTCTACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp GTCGCAGAGGAAGGAGGATTGGGCAGCATCCTGACTTaGCCCTCCCTCAAAATGAGCATCGTACTGAGGAAA +
Preference number: 6 (lower is better)
Translates to: VAEEGGLGSILT*PSLKMSIVLRK
Trigger: TTTCCTCAGTACGATGCTCATTTTGAGGGAGGGTCAAGTCAGGATGCTGCCCAATCCTCCTTCCTCTGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp CCGGTGTGGGTGCTGGAAGATGGATCACTGTGTTGTTaGTCTTTTGTGGTGCTGCCGTTCTTTGCCTTATGC +
Preference number: 6 (lower is better)
Translates to: PVWVLEDGSLCC*SFVVLPFFALC
Trigger: GCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCACCCACACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 72 bp ATCGGAACACTCTATGCCGGTGTGGGTGCTGGAAGATaGATCACTGTGTTGTTGCTCTTTTGTGGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: IGTLYAGVGAGR*ITVLLLFCGAA
Trigger: GGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCACCCACACCGGCATAGAGTGTTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 72 bp CGATTTCGGAGTTTCTCATCCTTGTGCTCCAAGCAGTaGGCTATGAGGGAGGCTCGGTCTTTTAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: RFRSFSSLCSKQ*AMREARSFKLE
Trigger: CTCCAGCTTAAAAGACCGAGCCTCCCTCATAGCCCACTGCTTGGAGCACAAGGATGAGAAACTCCGAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TCACAACCATCTCGCCCTGAAACTGAAAGAACGGGGTaGGCGGGAAGCTTTCTAATACGCCATTCGTCCCGT +
Preference number: 6 (lower is better)
Translates to: SQPSRPETERTG*AGSFLIRHSSR
Trigger: ACGGGACGAATGGCGTATTAGAAAGCTTCCCGCCAACCCCGTTCTTTCAGTTTCAGGGCGAGATGGTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp AGTCGCAGAGGAAGGAGGATTGGGCAGCATCCTGACTaGACCCTCCCTCAAAATGAGCATCGTACTGAGGAA +
Preference number: 6 (lower is better)
Translates to: SRRGRRIGQHPD*TLPQNEHRTEE
Trigger: TTCCTCAGTACGATGCTCATTTTGAGGGAGGGTCAAGTCAGGATGCTGCCCAATCCTCCTTCCTCTGCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp TCTTTCTGTAGCGTCTGTTCATCCGGTAGCTCTTTGTaGAGGGGTCGTGACCTCTGGAGAACCACACTGAGT +
Preference number: 6 (lower is better)
Translates to: SFCSVCSSGSSL*RGRDLWRTTLS
Trigger: ACTCAGTGTGGTTCTCCAGAGGTCACGACCCCTTCACAAAGAGCTACCGGATGAACAGACGCTACAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp CAGCTGGCGGCCATATATCATTCTCATGCTGAGCAATaGAGATACTGGCCATCCACTCCATCTGGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: QLAAIYHSHAEQ*RYWPSTPSGLV
Trigger: TACAAGCCCAGATGGAGTGGATGGCCAGTATCTTCATTGCTCAGCATGAGAATGATATATGGCCGCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp TCTTTTAAGCTGGAGTCCGTAAAGTCTCGAGGATCGTaGTTTTCACTCAGCCGCAGCCTTTCAAGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SFKLESVKSRGS*FSLSRSLSSSA
Trigger: AGCAGAGCTTGAAAGGCTGCGGCTGAGTGAAAAGCACGATCCTCGAGACTTTACGGACTCCAGCTTAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp AGCTCTGCTCTGGCCGTCTCAATATTCTTACGGGCCTaGGTCGCATTTCTCTCATGTTGGATAGGAATCAGA +
Preference number: 6 (lower is better)
Translates to: SSALAVSIFLRA*VAFLSCWIGIR
Trigger: TCTGATTCCTATCCAACATGAGAGAAATGCGACCCAGGCCCGTAAGAATATTGAGACGGCCAGAGCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp ATCCTCCTACGGTGTCCAGTAGGTGATATTCCAATCTaGTGGAGTACGCTGTCATTTATCGACGTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: ILLRCPVGDIPI*WSTLSFIDVQS
Trigger: GGACTGCACGTCGATAAATGACAGCGTACTCCATCAGATTGGAATATCACCTACTGGACACCGTAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS TCA 72 bp TGTTGTCTCCTTGAGCCCGGACTGTGGATATCGCCGTaGGGGGAATTATTCCTTTTGAGTACATCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: CCLLEPGLWISP*GELFLLSTSLC
Trigger: ACAGAGAGATGTACTCAAAAGGAATAATTCCCCTCACGGCGATATCCACAGTCCGGGCTCAAGGAGACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp CTCCGCCACTTCATAATCAGAGAGAGTCTCTGCTATTaGCTGCTGCACAGCTTCAATCCACTCCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: LRHFIIRESLCY*LLHSFNPLLFL
Trigger: GAGAAACAGGAGTGGATTGAAGCTGTGCAGCAGTCAATAGCAGAGACTCTCTCTGATTATGAAGTGGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp CTAATGCAGAGACCCAGTATGGATAGAGCTCCTTCGTaGGGAGAGCGTCATCAATGTCCGACAGAAAACTCT +
Preference number: 6 (lower is better)
Translates to: LMQRPSMDRAPS*GERHQCPTENS
Trigger: AGAGTTTTCTGTCGGACATTGATGACGCTCTCCTCACGAAGGAGCTCTATCCATACTGGGTCTCTGCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp TTTCTAATACGCCATTCGTCCCGTTTCCAGAATGTGTaGCTGATGTTGGACAGTCCCCAGAGGGAAGACATT +
Preference number: 6 (lower is better)
Translates to: FLIRHSSRFQNV*LMLDSPQREDI
Trigger: AATGTCTTCCCTCTGGGGACTGTCCAACATCAGGCACACATTCTGGAAACGGGACGAATGGCGTATTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp CATAGAAGCAGGCATAGGGAGAGATGGCATTTGAGATaGTTGATGACGGTTCAGTATTTCCACTCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: HRSRHRERWHLR*LMTVQYFHSWS
Trigger: GCTCCACGAGTGGAAATACTGAACCGTCATCAACCATCTCAAATGCCATCTCTCCCTATGCCTGCTTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp CAGAAAACTCTTCAGCACGCCTGTCACATCTTCAAGTaGATGTTTCCCAGCTCGCAACTTAACACTCCTGGC +
Preference number: 6 (lower is better)
Translates to: QKTLQHACHIFK*MFPSSQLNTPG
Trigger: GCCAGGAGTGTTAAGTTGCGAGCTGGGAAACATCAACTTGAAGATGTGACAGGCGTGCTGAAGAGTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp TGGCTGCTGAAGATCCATAGAAGCAGGCATAGGGAGAGATGGCATTaGAGATGGTTGATGACGGTTCAGTATTTCCACTCGTGGAGCTTA +
Preference number: 6 (lower is better)
Translates to: WLLKIHRSRHRERWH*RWLMTVQYFHSWSL
Trigger: TAAGCTCCACGAGTGGAAATACTGAACCGTCATCAACCATCTCAAATGCCATCTCTCCCTATGCCTGCTTCTATGGATCTTCAGCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp AATGTCCGACAGAAAACTCTTCAGCACGCCTGTCACATCTTCAAGTaGATGTTTCCCAGCTCGCAACTTAACACTCCTGGCATCCTTCTT +
Preference number: 6 (lower is better)
Translates to: NVRQKTLQHACHIFK*MFPSSQLNTPGILL
Trigger: AAGAAGGATGCCAGGAGTGTTAAGTTGCGAGCTGGGAAACATCAACTTGAAGATGTGACAGGCGTGCTGAAGAGTTTTCTGTCGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp TCGATGACCTTCGATGGCAGCTTAGGATCTGCGTCTAAGGTAGCTTaGCTGTTTCTTTCCTCTGTCTTCTTCAGTGTCTTCGGACCTTTA +
Preference number: 6 (lower is better)
Translates to: SMTFDGSLGSASKVA*LFLSSVFFSVFGPL
Trigger: TAAAGGTCCGAAGACACTGAAGAAGACAGAGGAAAGAAACAGCAAAGCTACCTTAGACGCAGATCCTAAGCTGCCATCGAAGGTCATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp AGAAAACTCTTCAGCACGCCTGTCACATCTTCAAGTTaGTGTTTCCCAGCTCGCAACTTAACACTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: RKLFSTPVTSSS*CFPARNLTLLA
Trigger: TGCCAGGAGTGTTAAGTTGCGAGCTGGGAAACATCAACTTGAAGATGTGACAGGCGTGCTGAAGAGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp GATGGATGCCCAGTCAGGATCTGGGGCTTTACAATCTaGACAGCTCCTGTTGGACTCATTAAACCAAATCTT +
Preference number: 6 (lower is better)
Translates to: DGCPVRIWGFTI*TAPVGLIKPNL
Trigger: AAGATTTGGTTTAATGAGTCCAACAGGAGCTGTGCAGATTGTAAAGCCCCAGATCCTGACTGGGCATCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp ACACTTCTTACAGATGACGACACAGAGATTGATGGATaGCCAGTCAGGATCTGGGGCTTTACAATCTGCACA +
Preference number: 6 (lower is better)
Translates to: TLLTDDDTEIDG*PVRIWGFTICT
Trigger: TGTGCAGATTGTAAAGCCCCAGATCCTGACTGGGCATCCATCAATCTCTGTGTCGTCATCTGTAAGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp ATTGCAGTATGCCAGACTGTGAAATCCAACTTGGTGTaGCCATGGATGTACAGTGTTCTCCCCTTTTCTACC +
Preference number: 6 (lower is better)
Translates to: IAVCQTVKSNLV*PWMYSVLPFST
Trigger: GGTAGAAAAGGGGAGAACACTGTACATCCATGGGCACACCAAGTTGGATTTCACAGTCTGGCATACTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TCTCCGCCACTTCATAATCAGAGAGAGTCTCTGCTATaGACTGCTGCACAGCTTCAATCCACTCCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SPPLHNQRESLL*TAAQLQSTPVS
Trigger: AGAAACAGGAGTGGATTGAAGCTGTGCAGCAGTCAATAGCAGAGACTCTCTCTGATTATGAAGTGGCGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TCAGGATCTGGGGCTTTACAATCTGCACAGCTCCTGTaGGACTCATTAAACCAAATCTTCTCCGCCACTTCA +
Preference number: 6 (lower is better)
Translates to: SGSGALQSAQLL*DSLNQIFSATS
Trigger: TGAAGTGGCGGAGAAGATTTGGTTTAATGAGTCCAACAGGAGCTGTGCAGATTGTAAAGCCCCAGATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TTCCCAGCTCGCAACTTAACACTCCTGGCATCCTTCTaGAAACTCTCCAGGAGTTCACTTATGTGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: FPARNLTLLASF*KLSRSSLMCKG
Trigger: TCCTTTGCACATAAGTGAACTCCTGGAGAGTTTCAAGAAGGATGCCAGGAGTGTTAAGTTGCGAGCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp TCAGTGTTTGTACTAAGTGCCTTGCTGGAATCTTCTGAGGTCAAATaGCCTTTTTCTGTGTGTTCTTCTCCAGCTGTGTACTCCACAGCC +
Preference number: 6 (lower is better)
Translates to: SVFVLSALLESSEVK*PFSVCSSPAVYSTA
Trigger: GGCTGTGGAGTACACAGCTGGAGAAGAACACACAGAAAAAGGCAATTTGACCTCAGAAGATTCCAGCAAGGCACTTAGTACAAACACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp GTTGCTCTGTTGACCCCAGGAAGAGAGCGTATAAAGGCTCTGTACTaGCTAGTTCTCTCCTTTTCATCTTGTGTATCTAATGCAGAGACC +
Preference number: 6 (lower is better)
Translates to: VALLTPGRERIKALY*LVLSFSSCVSNAET
Trigger: GGTCTCTGCATTAGATACACAAGATGAAAAGGAGAGAACTAGCAAGTACAGAGCCTTTATACGCTCTCTTCCTGGGGTCAACAGAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp TTCCAATCTGATGGAGTACGCTGTCATTTATCGACGTaGAGTCCCTCACGGTATAAAAACCGAATTCACGGA +
Preference number: 6 (lower is better)
Translates to: FQSDGVRCHLST*SPSRYKNRIHG
Trigger: TCCGTGAATTCGGTTTTTATACCGTGAGGGACTGCACGTCGATAAATGACAGCGTACTCCATCAGATTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 72 bp TGCTGGAAGATGGATCACTGTGTTGTTGCTCTTTTGTaGTGCTGCCGTTCTTTGCCTTATGCACATTTGCAT +
Preference number: 6 (lower is better)
Translates to: CWKMDHCVVALL*CCRSLPYAHLH
Trigger: ATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 72 bp ATATTCTTACGGGCCTGGGTCGCATTTCTCTCATGTTaGATAGGAATCAGAGGTAAACCTCCAATCTTGGGA +
Preference number: 6 (lower is better)
Translates to: IFLRAWVAFLSC*IGIRGKPPILG
Trigger: TCCCAAGATTGGAGGTTTACCTCTGATTCCTATCCAACATGAGAGAAATGCGACCCAGGCCCGTAAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp AAGATCCATAGAAGCAGGCATAGGGAGAGATGGCATTaGAGATGGTTGATGACGGTTCAGTATTTCCACTCG +
Preference number: 6 (lower is better)
Translates to: KIHRSRHRERWH*RWLMTVQYFHS
Trigger: CGAGTGGAAATACTGAACCGTCATCAACCATCTCAAATGCCATCTCTCCCTATGCCTGCTTCTATGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp CCTTTGTGTTGTAACAATTTCAAATTTGTTGTCTCCTaGAGCCCGGACTGTGGATATCGCCGTGAGGGGAAT +
Preference number: 6 (lower is better)
Translates to: PLCCNNFKFVVS*SPDCGYRREGN
Trigger: ATTCCCCTCACGGCGATATCCACAGTCCGGGCTCAAGGAGACAACAAATTTGAAATTGTTACAACACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TCAGAGGTAAACCTCCAATCTTGGGATTTTTGGTTATaGAACGTTTCCGTTCCTTTCCAGCTGGCGGCCATA +
Preference number: 6 (lower is better)
Translates to: SEVNLQSWDFWL*NVSVPFQLAAI
Trigger: TATGGCCGCCAGCTGGAAAGGAACGGAAACGTTCAATAACCAAAAATCCCAAGATTGGAGGTTTACCTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp ACTGTGTTGTTGCTCTTTTGTGGTGCTGCCGTTCTTTaGCTTATGCACATTTGCATATATGGGGAAGTCTTG +
Preference number: 6 (lower is better)
Translates to: TVLLLFCGAAVL*LMHICIYGEVL
Trigger: CAAGACTTCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CAA 72 bp CACTGTGTTGTTGCTCTTTTGTGGTGCTGCCGTTCTTaGCCTTATGCACATTTGCATATATGGGGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: HCVVALLWCCRS*PYAHLHIWGSL
Trigger: AAGACTTCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CAA 72 bp GTACTAAGTGCCTTGCTGGAATCTTCTGAGGTCAAATaGCCTTTTTCTGTGTGTTCTTCTCCAGCTGTGTAC +
Preference number: 6 (lower is better)
Translates to: VLSALLESSEVK*PFSVCSSPAVY
Trigger: GTACACAGCTGGAGAAGAACACACAGAAAAAGGCAATTTGACCTCAGAAGATTCCAGCAAGGCACTTAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TTTTCAATTGCAGTATGCCAGACTGTGAAATCCAACTaGGTGTGCCCATGGATGTACAGTGTTCTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: FSIAVCQTVKSN*VCPWMYSVLPF
Trigger: AAAGGGGAGAACACTGTACATCCATGGGCACACCAAGTTGGATTTCACAGTCTGGCATACTGCAATTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp TCATGTTGGATAGGAATCAGAGGTAAACCTCCAATCTTGGGATTTTaGGTTATTGAACGTTTCCGTTCCTTTCCAGCTGGCGGCCATATA +
Preference number: 6 (lower is better)
Translates to: SCWIGIRGKPPILGF*VIERFRSFPAGGHI
Trigger: TATATGGCCGCCAGCTGGAAAGGAACGGAAACGTTCAATAACCAAAAATCCCAAGATTGGAGGTTTACCTCTGATTCCTATCCAACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp GCATTTCTCTCATGTTGGATAGGAATCAGAGGTAAACCTCCAATCTaGGGATTTTTGGTTATTGAACGTTTCCGTTCCTTTCCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: AFLSCWIGIRGKPPI*GFLVIERFRSFPAG
Trigger: GCCAGCTGGAAAGGAACGGAAACGTTCAATAACCAAAAATCCCAAGATTGGAGGTTTACCTCTGATTCCTATCCAACATGAGAGAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp AAGATGGATCACTGTGTTGTTGCTCTTTTGTGGTGCTaGCGTTCTTTGCCTTATGCACATTTGCATATATGG +
Preference number: 6 (lower is better)
Translates to: KMDHCVVALLWC*RSLPYAHLHIW
Trigger: CCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS GCA 72 bp TGGAAGATGGATCACTGTGTTGTTGCTCTTTTGTGGTaGTGCCGTTCTTTGCCTTATGCACATTTGCATATA +
Preference number: 6 (lower is better)
Translates to: WKMDHCVVALLW*CRSLPYAHLHI
Trigger: TATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACAACACAGTGATCCATCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CCA 72 bp CCACCAAATAAAGAATCTTTCGAAGAATCCACGTTCTaGTGTAGTTCTTCTTCTGGACAGAGCAGGTCATGT +
Preference number: 6 (lower is better)
Translates to: PPNKESFEESTF*CSSSSGQSRSC
Trigger: ACATGACCTGCTCTGTCCAGAAGAAGAACTACACCAGAACGTGGATTCTTCGAAAGATTCTTTATTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp CCGAATTCACGGAAATGTAAGAGGTACTGCTCCAAATaGATGCTCATCAGGAAATCTCTGATGTCCGCATTT +
Preference number: 6 (lower is better)
Translates to: PNSRKCKRYCSK*MLIRKSLMSAF
Trigger: AAATGCGGACATCAGAGATTTCCTGATGAGCATCAATTTGGAGCAGTACCTCTTACATTTCCGTGAATTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS CAA 72 bp GTGTGTTCTTCTCCAGCTGTGTACTCCACAGCCCTCTaGGTAATCAAAGGATCTATTTTGACATTTACACCA +
Preference number: 6 (lower is better)
Translates to: VCSSPAVYSTAL*VIKGSILTFTP
Trigger: TGGTGTAAATGTCAAAATAGATCCTTTGATTACCAAGAGGGCTGTGGAGTACACAGCTGGAGAAGAACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS GCA 72 bp TGTTGCTCTTTTGTGGTGCTGCCGTTCTTTGCCTTATaGACATTTGCATATATGGGGAAGTCTTGCATTTTT +
Preference number: 6 (lower is better)
Translates to: CCSFVVLPFFAL*TFAYMGKSCIF
Trigger: AAAAATGCAAGACTTCCCCATATATGCAAATGTGCATAAGGCAAAGAACGGCAGCACCACAAAAGAGCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076623.8
ENSMUST00000159470.3
CDS GCA 72 bp AGACTGTTTCACAGCTCGATCTACTTGCTTCACATTTaGAACATTCATGGGAATTATGGTAATACCGAGTCC +
Preference number: 6 (lower is better)
Translates to: RLFHSSIYLLHI*NIHGNYGNTES
Trigger: GGACTCGGTATTACCATAATTCCCATGAATGTTGCAAATGTGAAGCAAGTAGATCGAGCTGTGAAACAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp TTTTTCTTCTTAAACTCTGGAAGCATTCCTCTACTGTaGAGTATTCTGACTCAGAAGCCGAATCCTGTGCAA +
Preference number: 6 (lower is better)
Translates to: FFFLNSGSIPLL*SILTQKPNPVQ
Trigger: TTGCACAGGATTCGGCTTCTGAGTCAGAATACTCCACAGTAGAGGAATGCTTCCAGAGTTTAAGAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CCA 72 bp GGCATCCATTTTCAGACTTCTAACTTTAGAGTCTTTTaGTCCCAACGATCTATGTTGTCCTGCACACTTCTT +
Preference number: 6 (lower is better)
Translates to: GIHFQTSNFRVF*SQRSMLSCTLL
Trigger: AAGAAGTGTGCAGGACAACATAGATCGTTGGGACCAAAAGACTCTAAAGTTAGAAGTCTGAAAATGGATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp CCAGCTGTGTACTCCACAGCCCTCTTGGTAATCAAAGGATCTATTTaGACATTTACACCACCAAATAAAGAATCTTTCGAAGAATCCACG +
Preference number: 6 (lower is better)
Translates to: PAVYSTALLVIKGSI*TFTPPNKESFEEST
Trigger: CGTGGATTCTTCGAAAGATTCTTTATTTGGTGGTGTAAATGTCAAAATAGATCCTTTGATTACCAAGAGGGCTGTGGAGTACACAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp AACAAAAGTCCTTTGTGTTGTAACAATTTCAAATTTGTTGTCTCCTaGAGCCCGGACTGTGGATATCGCCGTGAGGGGAATTATTCCTTT +
Preference number: 6 (lower is better)
Translates to: NKSPLCCNNFKFVVS*SPDCGYRREGNYSF
Trigger: AAAGGAATAATTCCCCTCACGGCGATATCCACAGTCCGGGCTCAAGGAGACAACAAATTTGAAATTGTTACAACACAAAGGACTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 90 bp CCTTTTTCTGTGTGTTCTTCTCCAGCTGTGTACTCCACAGCCCTCTaGGTAATCAAAGGATCTATTTTGACATTTACACCACCAAATAAA +
Preference number: 6 (lower is better)
Translates to: PFSVCSSPAVYSTAL*VIKGSILTFTPPNK
Trigger: TTTATTTGGTGGTGTAAATGTCAAAATAGATCCTTTGATTACCAAGAGGGCTGTGGAGTACACAGCTGGAGAAGAACACACAGAAAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp AGCCACACACTGTTGCCCCTTAACACGGTAAAAATTTaGGCTTTATACCCTCTCAATTCAAGATATCCACAT +
Preference number: 6 (lower is better)
Translates to: SHTLLPLNTVKI*ALYPLNSRYPH
Trigger: ATGTGGATATCTTGAATTGAGAGGGTATAAAGCCAAAATTTTTACCGTGTTAAGGGGCAACAGTGTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp GACTGTGGATATCGCCGTGAGGGGAATTATTCCTTTTaGGTACATCTCTCTGTCATTATTGTAGTAAGAAAT +
Preference number: 6 (lower is better)
Translates to: DCGYRREGNYSF*VHLSVIIVVRN
Trigger: ATTTCTTACTACAATAATGACAGAGAGATGTACTCAAAAGGAATAATTCCCCTCACGGCGATATCCACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp TCTACCAAGAGTAACACATCTACTTTTTCTCCATTTTaGACCATTGTGCTGATTGTTAGCTCCTGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: STKSNTSTFSPF*TIVLIVSSCSL
Trigger: AAGACTGCAGGAGCTAACAATCAGCACAATGGTTCAAAATGGAGAAAAAGTAGATGTGTTACTCTTGGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp AAAAGACCATTGCCAAGTTATGGGCATTCATGTGATTaGTTTCTGAGCATTTCTGAACCCTGTAAAGGTGTT +
Preference number: 6 (lower is better)
Translates to: KRPLPSYGHSCD*FLSISEPCKGV
Trigger: AACACCTTTACAGGGTTCAGAAATGCTCAGAAATCAATCACATGAATGCCCATAACTTGGCAATGGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS CAA 72 bp TCATGTTGGATAGGAATCAGAGGTAAACCTCCAATCTaGGGATTTTTGGTTATTGAACGTTTCCGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: SCWIGIRGKPPI*GFLVIERFRSF
Trigger: AAAGGAACGGAAACGTTCAATAACCAAAAATCCCAAGATTGGAGGTTTACCTCTGATTCCTATCCAACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8
CDS TCA 72 bp AAGAGATGCCCATCTCGTAAAACAACACATCGATCTTaGAATTTATTCCCAGACAGTATTTTAGATGGTTCT +
Preference number: 6 (lower is better)
Translates to: KRCPSRKTTHRS*NLFPDSILDGS
Trigger: AGAACCATCTAAAATACTGTCTGGGAATAAATTTCAAGATCGATGTGTTGTTTTACGAGATGGGCATCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076623.8