Pregenerated sensors for ARAF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001127Ensembl transcript IDs: ENSMUST00000001155.11, ENSMUST00000120356.8, ENSMUST00000122312.8, ENSMUST00000122850.2, ENSMUST00000128250.3, ENSMUST00000136451.8
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTaGGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: FLGSLKFPRVWDRES*GSIKAEAEQLLAGR Trigger: CCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR CAA 90 bp | ATGGCAAACCCCGGCCGAGTCATGAAACCCATGAACAGCAAAATGTaGACATGCCGTGTCTTCCTTGTCTTCAAGGGTGCTCAGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: MANPGRVMKPMNSKM*TCRVFLVFKGAQGQ Trigger: TTGGCCCTGAGCACCCTTGAAGACAAGGAAGACACGGCATGTCAACATTTTGCTGTTCATGGGTTTCATGACTCGGCCGGGGTTTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAAAGGCAGAACAGTTATTaGCTGGTAGGTCGGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: EWNPCTESQPLEIKQLSKRQNSY*LVGRCA Trigger: GGCACACCGACCTACCAGCCAATAACTGTTCTGCCT...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACCCCGGTGTGCCTTGGCATaGTATGCTGAAATTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VTAIGDKTALQIRTIPKPRCALA*YAEIGS Trigger: GGAGCCAATTTCAGCATACCATGCCAAGGCACACCG...GGGTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACCCAGGCAGAACAGTTATTaGCTGGTAGGTCGGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: VTAIGDKTALQIRTIPKPRQNSY*LVGRCA Trigger: GGCACACCGACCTACCAGCCAATAACTGTTCTGCCT...GGGTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCGAAGTCACCAATCTTGACTGTGAGCCCCTCATGTAAGAAGATATTGTTGAGCAAAATGTTGACATaGCGTGTCTTCCTTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RPKSPILTVSPSCKKILLSKMLT*RVFLVF Trigger: GAAGACAAGGAAGACACGGCATGTCAACATTTTGCT...CAACAATATCTTCTTACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACCTTTCACTGGCCCCCTaGCCTTTCATCTACGACATC | + |
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Preference number: 2 (lower is better) Translates to: SVTFTILRLNSQVNQHTYLSLAP*PFIYDI Trigger: GATGTCGTAGATGAAAGGCCAGGGGGCCAGTGAAAG...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| 3UTR CCA 72 bp | AGTGACCGCTGCAGTAGCTCGATCGTGGCCAGAATCTaGGGAAATAGGGGCCGCTCCTCCCGCTGGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SDRCSSSIVARI*GNRGRSSRWNL Trigger: CAAGTTCCAGCGGGAGGAGCGGCCCCTATTTCCCCAGATTCTGGCCACGATCGAGCTACTGCAGCGGTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| 3UTR CCA 72 bp | CCTGAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTaGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: PEAVSRQRQNSY*LVGRCALAWYA Trigger: AGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTCAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR CAA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGCATGGTATGCTGAAATaGGCTCCCTGGTGGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: NYGESRRPQFLGSLKFPRHGMLK*APWWAG Trigger: CCCAGCCCACCAGGGAGCCAATTTCAGCATACCATG...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAACATGGTATGCTGAAATaGGCTCCCTGGTGGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EWNPCTESQPLEIKQLSKHGMLK*APWWAG Trigger: CCCAGCCCACCAGGGAGCCAATTTCAGCATACCATG...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR CAA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGAGGCAGAACAGTTATaGGCTGGTAGGTCGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NYPQTQEETKLWRKQETSEAEQL*AGRSVC Trigger: GCACACCGACCTACCAGCCAATAACTGTTCTGCCTC...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR-3UTR CAA 90 bp | AGAACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTGAGGCAGAACAGTTATaGGCTGGTAGGTCGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: RTIPKPKRRPNYGESRRPEAEQL*AGRSVC Trigger: GCACACCGACCTACCAGCCAATAACTGTTCTGCCTC...AGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| 3UTR TCA 72 bp | TGTTTTAAGACAGTCTCATGTAGCCCAGGCTGGCCTTaGACTTGCTACTTAGTGGAGGGTAGCCTTGAACTA | + |
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Preference number: 3 (lower is better) Translates to: CFKTVSCSPGWP*TCYLVEGSLEL Trigger: TAGTTCAAGGCTACCCTCCACTAAGTAGCAAGTTCAAGGCCAGCCTGGGCTACATGAGACTGTCTTAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| 3UTR GCA 72 bp | GCAAAAACTTTAGAAAGAGGTTCTGAGTGGAATCCTTaGACTGAGTCACAGCCATTGGAGATAAAACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: AKTLERGSEWNP*TESQPLEIKQL Trigger: GAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTCAGAACCTCTTTCTAAAGTTTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCGCGGATGCGCTGCAGTaGGGGATTGGCAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVSRQRQNSYWLVGRCAADALQ*GIGRGR Trigger: CCTGCCCCTGCCAATCCCCCACTGCAGCGCATCCGC...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGGTGGAGCGGATGCGCTaGAGTGGGGGATTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLVERMR*SGGLAG Trigger: CCCTGCCAATCCCCCACTGCAGCGCATCCGCTCCAC...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCTTGAAGGCCTGGGCCTaGTCAGCGGTAGGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAVSRQRQNSYWLVGRCALKAWA*SAVGWA Trigger: GGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAA...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCTTTGAGGGAGCCTCCTaGTGCCTGGAGCCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: EAVSRQRQNSYWLVGRCAFEGAS*CLEPPD Trigger: GTCTGGAGGCTCCAGGCAGCAGGAGGCTCCCTCAAA...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATGCGGATGCGCTGCAGTaGGGGATTGGCAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNADALQ*GIGRGR Trigger: CCTGCCCCTGCCAATCCCCCACTGCAGCGCATCCGC...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGGGCCGCTCCTCCCGCTaGAACTTGAGGCAGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLGRSSR*NLRQSV Trigger: GACTGACTGCCTCAAGTTCCAGCGGGAGGAGCGGCC...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR TCA 90 bp | AATCCTGAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGCCTCCCGCTGGAACTTaGGGCAGTCAGTCAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: NPEAVSRQRQNSYWLVGRPPAGT*GSQSAG Trigger: GCCTGCTGACTGACTGCCTCAAGTTCCAGCGGGAGG...CCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTCAGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR TCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCCTCCCGCTGGAACTTaGGGCAGTCAGTCAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSPPAGT*GSQSAG Trigger: GCCTGCTGACTGACTGCCTCAAGTTCCAGCGGGAGG...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR TCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGCAAGACGGGCTGCGCTaGGAAGGCAAGCAGGCAACT | + |
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Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLQDGLR*EGKQAT Trigger: AGTTGCCTGCTTGCCTTCTCAGCGCAGCCCGTCTTG...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR GCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCTCAGCCTGGGTGCGGTaGAAGGAGGGTTCGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSSAWVR*KEGSEA Trigger: TGCCTCCGAACCCTCCTTGCACCGCACCCAGGCTGA...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR TCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGCTCCCAGTAATAGCCTaGGTCCCGGTACCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLLPVIA*VPVPQV Trigger: AACCTGGGGTACCGGGACTCAGGCTATTACTGGGAG...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCAAGACGGGCTGCGCTaGGAAGGCAAGCAGGCAACT | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSQDGLR*EGKQAT Trigger: AGTTGCCTGCTTGCCTTCTCAGCGCAGCCCGTCTTG...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR GCA 90 bp | AGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGGCCTTTCTTTGAGGGAGCCTCCTaGTGCCTGGAGCCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SIISQGPPILLSLAPWPFFEGAS*CLEPPD Trigger: GTCTGGAGGCTCCAGGCAGCAGGAGGCTCCCTCAAA...GAAAGGCCAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR GCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCTTGGGGAGTGACCGCTaGAGTAGCTCGATCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSLGSDR*SSSIVA Trigger: GGCCACGATCGAGCTACTGCAGCGGTCACTCCCCAA...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR GCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCACTCATCAGCCTGGGTaGGGTGCAAGGAGGGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSTHQPG*GARRVR Trigger: CCGAACCCTCCTTGCACCGCACCCAGGCTGATGAGT...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR GCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCAGGCACAAGACGGGCTaGGCTGAGAAGGCAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSRHKTG*AEKASR Trigger: CCTGCTTGCCTTCTCAGCGCAGCCCGTCTTGTGCCT...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR CCA 90 bp | GACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGGCCGCTCCTCCCGCTaGAACTTGAGGCAGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: DLSFWGPSNFPGYGIGNPGRSSR*NLRQSV Trigger: GACTGACTGCCTCAAGTTCCAGCGGGAGGAGCGGCC...AGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR CCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCGGCAACTCATCAGCCTaGGTGCGGTGCAAGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSGNSSA*VRCKEG Trigger: ACCCTCCTTGCACCGCACCCAGGCTGATGAGTTGCC...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR CCA 90 bp | GGGGCAATTACTGAAGATTTTGCTGAGGTCCGGAGACAGATAGCCACGGCCCACATAGGCCTCCTTATCTaGCTTCTGTGGGAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAITEDFAEVRRQIATAHIGLLI*LLWEGS Trigger: GCTGCCCTCCCACAGAAGCCAGATAAGGAGGCCTAT...GTGGGCCGTGGCTATCTGTCTCCGGACCTCAGCAAAATCTTCAGTAATTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTGGAGCGGATGCGCTaGAGTGGGGGATTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRVERMR*SGGLAG Trigger: CCCTGCCAATCCCCCACTGCAGCGCATCCGCTCCAC...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATTTGGGGAGTGACCGCTaGAGTAGCTCGATCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNLGSDR*SSSIVA Trigger: GGCCACGATCGAGCTACTGCAGCGGTCACTCCCCAA...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR GCA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGACTCATCAGCCTGGGTaGGGTGCAAGGAGGGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LSFWGPSNFPGYGIGNPETHQPG*GARRVR Trigger: CCGAACCCTCCTTGCACCGCACCCAGGCTGATGAGT...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR CCA 90 bp | GGGGCAATTACTGAAGATTTTGCTGAGGTCCGGAGACAGATAGCCACGGCCCACTGTCAACGCAGACGGTaGGGACCTTGGAGGAACAAT | + |
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Preference number: 4 (lower is better) Translates to: GAITEDFAEVRRQIATAHCQRRR*GPWRNN Trigger: ATTGTTCCTCCAAGGTCCCCACCGTCTGCGTTGACA...GTGGGCCGTGGCTATCTGTCTCCGGACCTCAGCAAAATCTTCAGTAATTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGGAGCCTCCTGCTGCCTaGAGCCTCCAGACAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: LSFWGPSNFPGYGIGNPEEPPAA*SLQTDP Trigger: AGGATCTGTCTGGAGGCTCCAGGCAGCAGGAGGCTC...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATAAGGGGCTGGGACCCTaGGGGGTTAGCAGCTCATTC | + |
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Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNKGLGP*GVSSSF Trigger: GAATGAGCTGCTAACCCCCCAGGGTCCCAGCCCCTT...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCACAGCTGTACCTCACTaGGTGGCACCTCCCAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: EAVSRQRQNSYWLVGRCATAVPH*VAPPSN Trigger: ATTACTGGGAGGTGCCACCCAGTGAGGTACAGCTGT...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGTCATTCTTGAAGGCCTaGGCCTGCTCAGCGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLSFLKA*ACSAVG Trigger: ACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGA...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGACCGTGTCTTCACTGTaGCCAGGCCGAAGTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLTVSSL*PGRSHQ Trigger: TTGGTGACTTCGGCCTGGCCACAGTGAAGACACGGT...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR CCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCATCGTGGCCAGAATCTaGGGAAATAGGGGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSIVARI*GNRGRS Trigger: GGAGCGGCCCCTATTTCCCCAGATTCTGGCCACGAT...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATGGCAACTCATCAGCCTaGGTGCGGTGCAAGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNGNSSA*VRCKEG Trigger: ACCCTCCTTGCACCGCACCCAGGCTGATGAGTTGCC...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR TCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGCATCTCATTCTTaGAGGCCTGGGCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNPASHS*RPGPAQ Trigger: CTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGG...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR TCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCGCAGTGAGCCGGTCATaGGCTCATAGAGCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSAVSRS*AHRAQH Trigger: GTGTTGTGCTCTATGAGCTCATGACCGGCTCACTGC...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAATCAGCCTGGGTGCGGTaGAAGGAGGGTTCGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWNPCTESQPLEIKQLSKSAWVR*KEGSEA Trigger: TGCCTCCGAACCCTCCTTGCACCGCACCCAGGCTGA...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATACCACACAGCAGTCCTaGTTGAGACCCCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNTTQQS*LRPRTF Trigger: GAAGGTGCGGGGTCTCAACCAGGACTGCTGTGTGGT...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGGCCTTTCAGACGGTGGGGACCTTaGAGGAACAATGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIISQGPPILLSLAPWPFRRWGP*RNNAGG Trigger: TCCACCAGCATTGTTCCTCCAAGGTCCCCACCGTCT...GAAAGGCCAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCAGAACTGTCGGCGGTTaGTACTCATGTCAACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAVSRQRQNSYWLVGRCARTVGG*YSCQRR Trigger: TCTGCGTTGACATGAGTACCAACCGCCGACAGTTCT...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AAACGAAAGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGGAGCCTCCTGCTGCCTaGAGCCTCCAGACAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKYNLSGSSNPSFTGPLEPPAA*SLQTDP Trigger: AGGATCTGTCTGGAGGCTCCAGGCAGCAGGAGGCTC...CAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACTTTCGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGTACCTCACTGGGTaGCACCTCCCAGTAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSLYLTG*HLPVIA Trigger: GGCTATTACTGGGAGGTGCCACCCAGTGAGGTACAG...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGGCCACATCAATGAGCTaGACCATGTCAAAGCGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLATSMS*TMSKRV Trigger: CACGCGCTTTGACATGGTCCAGCTCATTGATGTGGC...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR CCA 90 bp | GACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTATCGTGGCCAGAATCTaGGGAAATAGGGGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLSFWGPSNFPGYGIGNPIVARI*GNRGRS Trigger: GGAGCGGCCCCTATTTCCCCAGATTCTGGCCACGAT...AGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR CCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCACTCCGCTCAATCTTaGGGAGTGACCGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSHSAQS*GVTAAV Trigger: TACTGCAGCGGTCACTCCCCAAGATTGAGCGGAGTG...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR TCA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCATTCACAGAGAGATTTaGGGGAGCCTCCTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYWLVGRCALAWYAEIGSIHREI*GSLLLP Trigger: AGGCAGCAGGAGGCTCCCTCAAATCTCTCTGTGAAT...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | TTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTGCCCCCGAAACACAGTaGCAAAAGAGCCTGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LWRKQETSVFGVPQISQGAPETQ*QKSLSR Trigger: TCGGGACAGGCTCTTTTGGCACTGTGTTTCGGGGGC...ACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AAACGAAAGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGACCACACAGCAGTCCTaGTTGAGACCCCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRKYNLSGSSNPSFTGPLTTQQS*LRPRTF Trigger: GAAGGTGCGGGGTCTCAACCAGGACTGCTGTGTGGT...CAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACTTTCGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATAGACGGTGGGGACCTTaGAGGAACAATGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNRRWGP*RNNAGG Trigger: TCCACCAGCATTGTTCCTCCAAGGTCCCCACCGTCT...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGGCCTTTCTGTCAACGCAGACGGTaGGGACCTTGGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIISQGPPILLSLAPWPFCQRRR*GPWRNN Trigger: ATTGTTCCTCCAAGGTCCCCACCGTCTGCGTTGACA...GAAAGGCCAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGAGAACTGTCGGCGGTTaGTACTCATGTCAACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLRTVGG*YSCQRR Trigger: TCTGCGTTGACATGAGTACCAACCGCCGACAGTTCT...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGAGCCTCCTGCTGCCTaGAGCCTCCAGACAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPREPPAA*SLQTDP Trigger: AGGATCTGTCTGGAGGCTCCAGGCAGCAGGAGGCTC...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGAAGGGGCTGGGACCCTaGGGGGTTAGCAGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRKGLGP*GVSSSF Trigger: GAATGAGCTGCTAACCCCCCAGGGTCCCAGCCCCTT...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCATCCTGGTCACGTTGCTaGGTAAAGGGGCTGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NYPQTQEETKLWRKQETSSWSRC*VKGLGP Trigger: GGGTCCCAGCCCCTTTACCCAGCAACGTGACCAGGA...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AGGCCGAAGTCACCAATCTTGACTGTGAGCCCCTCATGTAAGAAGATATTGTTGTCCTGGTCACGTTGCTaGGTAAAGGGGCTGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RPKSPILTVSPSCKKILLSWSRC*VKGLGP Trigger: GGGTCCCAGCCCCTTTACCCAGCAACGTGACCAGGA...CAACAATATCTTCTTACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCGTTCTGAAGGTAACTTaGAATGTGGGGACTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAVSRQRQNSYWLVGRCAVLKVT*NVGTSS Trigger: GGAGGAAGTCCCCACATTCCAAGTTACCTTCAGAAC...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | AGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGGCCTTTCCACAGAAGGCCAGGCTaGAGAATGTCTTCCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SIISQGPPILLSLAPWPFHRRPG*RMSSVQ Trigger: TTGTACGGAAGACATTCTTCAGCCTGGCCTTCTGTG...GAAAGGCCAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR TCA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAATGGGGACTTCCTCCCTaGAGACACACTAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EWNPCTESQPLEIKQLSKWGLPP*RHTSWA Trigger: AGCCCAGCTAGTGTGTCTTCAGGGAGGAAGTCCCCA...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | AGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATGGGGACTTCCTCCCTaGAGACACACTAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRPNYGESRRPQFLGSLKWGLPP*RHTSWA Trigger: AGCCCAGCTAGTGTGTCTTCAGGGAGGAAGTCCCCA...TTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | AGGCCGAAGTCACCAATCTTGACTGTGAGCCCCTCATGTAAGAAGATATTGTTGCTCCCAGTAATAGCCTaGGTCCCGGTACCCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPKSPILTVSPSCKKILLLPVIA*VPVPQV Trigger: AACCTGGGGTACCGGGACTCAGGCTATTACTGGGAG...CAACAATATCTTCTTACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | AGAGGTTCTGAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCCTGCATCTCATTCTTaGAGGCCTGGGCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSEWNPCTESQPLEIKQPASHS*RPGPAQ Trigger: CTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGG...CTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTCAGAACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGGACTTTAGGTCTCGATaGATGATGTTCTTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLDFRSR*MMFLAW Trigger: CCACGCCAAGAACATCATTCATCGAGACCTAAAGTC...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR GCA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGCCCCCGAAACACAGTaGCAAAAGAGCCTGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NYPQTQEETKLWRKQETSAPETQ*QKSLSR Trigger: TCGGGACAGGCTCTTTTGGCACTGTGTTTCGGGGGC...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | GTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACCCAGGCACAAGACGGGCTaGGCTGAGAAGGCAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTAIGDKTALQIRTIPKPRHKTG*AEKASR Trigger: CCTGCTTGCCTTCTCAGCGCAGCCCGTCTTGTGCCT...GGGTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR CCA 90 bp | AGAACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTACCACACAGCAGTCCTaGTTGAGACCCCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTIPKPKRRPNYGESRRPTTQQS*LRPRTF Trigger: GAAGGTGCGGGGTCTCAACCAGGACTGCTGTGTGGT...AGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATTGTCAACGCAGACGGTaGGGACCTTGGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNCQRRR*GPWRNN Trigger: ATTGTTCCTCCAAGGTCCCCACCGTCTGCGTTGACA...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCACTTATCTGGCTTCTGTaGGAGGGCAGCCCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYPQTQEETKLWRKQETSLIWLL*EGSPLV Trigger: GACCAAGGGGCTGCCCTCCCACAGAAGCCAGATAAG...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGCACAGAAGGCCAGGCTaGAGAATGTCTTCCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSFWGPSNFPGYGIGNPEHRRPG*RMSSVQ Trigger: TTGTACGGAAGACATTCTTCAGCCTGGCCTTCTGTG...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | AGAGGTTCTGAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGGCAGTGAGCCGGTCATaGGCTCATAGAGCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSEWNPCTESQPLEIKQAVSRS*AHRAQH Trigger: GTGTTGTGCTCTATGAGCTCATGACCGGCTCACTGC...CTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTCAGAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR GCA 90 bp | AAACGAAAGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGCAGACAGATCCTGGATaGTGTGGTAGAACTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKYNLSGSSNPSFTGPLQTDPG*CGRTVG Trigger: GCCGACAGTTCTACCACAGCATCCAGGATCTGTCTG...CAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACTTTCGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAATTGAAGGCCTGGGCCTaGTCAGCGGTAGGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPCTESQPLEIKQLSKLELKAWA*SAVGWA Trigger: GGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAA...TTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AATCCTGAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGGCAGCGGAATCCATaGAACAGAAACTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPEAVSRQRQNSYWLVGRWQRNP*NRNLRQ Trigger: CTGCCTTAAGTTTCTGTTCCATGGATTCCGCTGCCA...CCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTCAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTCTGAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGAGACGGTGGGGACCTTaGAGGAACAATGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGSEWNPCTESQPLEIKQRRWGP*RNNAGG Trigger: TCCACCAGCATTGTTCCTCCAAGGTCCCCACCGTCT...CTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTCAGAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGCTGTACCTCACTGGGTaGCACCTCCCAGTAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRLYLTG*HLPVIA Trigger: GGCTATTACTGGGAGGTGCCACCCAGTGAGGTACAG...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTCTGAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGTGCTCAGCGGTAGGTTaGGCCACCTTGAGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSEWNPCTESQPLEIKQCSAVG*ATLSTF Trigger: GAAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCA...CTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTCAGAACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTTCATTCTTGAAGGCCTaGGCCTGCTCAGCGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTIPKPKRRPNYGESRRPSFLKA*ACSAVG Trigger: ACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGA...AGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGCACTCCGCTCAATCTTaGGGAGTGACCGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRHSAQS*GVTAAV Trigger: TACTGCAGCGGTCACTCCCCAAGATTGAGCGGAGTG...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR TCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGCATGCCGTGTCTTCCTaGGCACCTGCATCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRHAVSS*APASHS Trigger: AGAATGAGATGCAGGTGCTCAGGAAGACACGGCATG...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR TCA 90 bp | GACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGACTTTAGGTCTCGATaGATGATGTTCTTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFWGPSNFPGYGIGNPDFRSR*MMFLAW Trigger: CCACGCCAAGAACATCATTCATCGAGACCTAAAGTC...AGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR GCA 90 bp | AAACGAAAGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGAGTCATAGACACTCATaGCTTCCCGGACAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKYNLSGSSNPSFTGPLSHRHS*LPGQSP Trigger: TGGTGACTGTCCGGGAAGGCATGAGTGTCTATGACT...CAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACTTTCGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR GCA 90 bp | AGAACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGACAGATCCTGGATaGTGTGGTAGAACTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTIPKPKRRPNYGESRRPQTDPG*CGRTVG Trigger: GCCGACAGTTCTACCACAGCATCCAGGATCTGTCTG...AGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGTGGCAGCGGAATCCATaGAACAGAAACTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFWGPSNFPGYGIGNPEWQRNP*NRNLRQ Trigger: CTGCCTTAAGTTTCTGTTCCATGGATTCCGCTGCCA...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AAACGAAAGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGAGAACTGTCGGCGGTTaGTACTCATGTCAACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRKYNLSGSSNPSFTGPLRTVGG*YSCQRR Trigger: TCTGCGTTGACATGAGTACCAACCGCCGACAGTTCT...CAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACTTTCGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGACAGCTGTACCTCACTaGGTGGCACCTCCCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRTAVPH*VAPPSN Trigger: ATTACTGGGAGGTGCCACCCAGTGAGGTACAGCTGT...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACCCTGCTCAGCGGTAGGTTaGGCCACCTTGAGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTAIGDKTALQIRTIPKPCSAVG*ATLSTF Trigger: GAAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCA...GGGTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGCCACATCAATGAGCTaGACCATGTCAAAGCGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NYPQTQEETKLWRKQETSATSMS*TMSKRV Trigger: CACGCGCTTTGACATGGTCCAGCTCATTGATGTGGC...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR TCA 90 bp | AGAACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCACAGAAGGCCAGGCTaGAGAATGTCTTCCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RTIPKPKRRPNYGESRRPHRRPG*RMSSVQ Trigger: TTGTACGGAAGACATTCTTCAGCCTGGCCTTCTGTG...AGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | GAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACGTTTTCAAGATGGGCTaGGGTAGGACTGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESQPLEIKQLSKLELSPNVFKMG*GRTGQL Trigger: CAGCTGCCCAGTCCTACCTCAGCCCATCTTGAAAAC...GTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR TCA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAATCAGATCGCAATCTGTaGGACTTGATGGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EWNPCTESQPLEIKQLSKSDRNL*DLMGFW Trigger: CCAGAAGCCCATCAAGTCTCACAGATTGCGATCTGA...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTTCTGAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGAGTCATAGACACTCATaGCTTCCCGGACAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSEWNPCTESQPLEIKQSHRHS*LPGQSP Trigger: TGGTGACTGTCCGGGAAGGCATGAGTGTCTATGACT...CTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTCAGAACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGTCTTCCTGAGCACCTaGATCTCATTCTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYPQTQEETKLWRKQETSVFLST*ISFLKA Trigger: GGCCTTCAAGAATGAGATGCAGGTGCTCAGGAAGAC...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR CCA 90 bp | AAACGAAAGTATAATCTCTCAGGGTCCTCCAATCCTTCTTTCACTGGCCCCCTGTGGCAGCGGAATCCATaGAACAGAAACTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRKYNLSGSSNPSFTGPLWQRNP*NRNLRQ Trigger: CTGCCTTAAGTTTCTGTTCCATGGATTCCGCTGCCA...CAGGGGGCCAGTGAAAGAAGGATTGGAGGACCCTGAGAGATTATACTTTCGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR GCA 90 bp | GTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACCCAGTCATAGACACTCATaGCTTCCCGGACAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VTAIGDKTALQIRTIPKPSHRHS*LPGQSP Trigger: TGGTGACTGTCCGGGAAGGCATGAGTGTCTATGACT...GGGTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAAGTTCTGAAGGTAACTTaGAATGTGGGGACTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWNPCTESQPLEIKQLSKVLKVT*NVGTSS Trigger: GGAGGAAGTCCCCACATTCCAAGTTACCTTCAGAAC...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | AGGCCGAAGTCACCAATCTTGACTGTGAGCCCCTCATGTAAGAAGATATTGTTGAGATTGTTTTCAAGATaGGCTGAGGTAGGACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPKSPILTVSPSCKKILLRLFSR*AEVGLG Trigger: GCCCAGTCCTACCTCAGCCCATCTTGAAAACAATCT...CAACAATATCTTCTTACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR GCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACTTTGAGGGAGCCTCCTaGTGCCTGGAGCCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVTFTILRLNSQVNQHTYFEGAS*CLEPPD Trigger: GTCTGGAGGCTCCAGGCAGCAGGAGGCTCCCTCAAA...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR GCA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGGTGGTGGTTCCATGTTaGCTAAGATTGTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFWGPSNFPGYGIGNPEVVVPC*LRLFSR Trigger: TCTTGAAAACAATCTTAGGCAACATGGAACCACCAC...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACGAGCCTCCTGCTGCCTaGAGCCTCCAGACAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTFTILRLNSQVNQHTYEPPAA*SLQTDP Trigger: AGGATCTGTCTGGAGGCTCCAGGCAGCAGGAGGCTC...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGGTAAGAAGATATTGTTaGACTTTAGGTCTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVGRCALAWYAEIGSLVRRYC*TLGLDE Trigger: TTCATCGAGACCTAAAGTCCAACAATATCTTCTTAC...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
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| CDS-3UTR GCA 90 bp | GAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACAGCAAAATGTTGACATaGCGTGTCTTCCTGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESQPLEIKQLSKLELSPNSKMLT*RVFLST Trigger: GGTGCTCAGGAAGACACGGCATGTCAACATTTTGCT...GTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS-3UTR GCA 90 bp | AATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGAAAATTCTGAGCACCTaGATCTCATTCTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYGESRRPQFLGSLKFPRKILST*ISFLKA Trigger: GGCCTTCAAGAATGAGATGCAGGTGCTCAGAATTTT...CCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACACCACACAGCAGTCCTaGTTGAGACCCCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVTFTILRLNSQVNQHTYTTQQS*LRPRTF Trigger: GAAGGTGCGGGGTCTCAACCAGGACTGCTGTGTGGT...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | AGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAAGTACAAAATTGTGCATaGTCAGTGGCACATCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RRPNYGESRRPQFLGSLKVQNCA*SVAHLL Trigger: TAGAAGATGTGCCACTGACCATGCACAATTTTGTAC...TTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGGTAAGAAGATATTGTTaGACTTTAGGTCTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSFWGPSNFPGYGIGNPEVRRYC*TLGLDE Trigger: TTCATCGAGACCTAAAGTCCAACAATATCTTCTTAC...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| 3UTR CAA 72 bp | TACTTAGTGGAGGGTAGCCTTGAACTATTGATCGTCTaGCCTCCACCTCCCATGAATTATACCTTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLVEGSLELLIV*PPPPMNYTLQK Trigger: TTTCTGTAAGGTATAATTCATGGGAGGTGGAGGCAAGACGATCAATAGTTCAAGGCTACCCTCCACTAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR TCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACCACAGAAGGCCAGGCTaGAGAATGTCTTCCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVTFTILRLNSQVNQHTYHRRPG*RMSSVQ Trigger: TTGTACGGAAGACATTCTTCAGCCTGGCCTTCTGTG...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACAGAACTGTCGGCGGTTaGTACTCATGTCAACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVTFTILRLNSQVNQHTYRTVGG*YSCQRR Trigger: TCTGCGTTGACATGAGTACCAACCGCCGACAGTTCT...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACTGGCAGCGGAATCCATaGAACAGAAACTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVTFTILRLNSQVNQHTYWQRNP*NRNLRQ Trigger: CTGCCTTAAGTTTCTGTTCCATGGATTCCGCTGCCA...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
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| CDS-3UTR CAA 90 bp | GCAACTCATCAGCCTGGGTGCGGTGCAAGGAGGGTTCGGAGGCACTCCGCTCAATGGGAGGGCAGCCCCTaGGTCCTTTGGAGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ATHQPGCGARRVRRHSAQWEGSP*VLWRLH Trigger: ATGGAGCCTCCAAAGGACCAAGGGGCTGCCCTCCCA...TTGAGCGGAGTGCCTCCGAACCCTCCTTGCACCGCACCCAGGCTGATGAGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
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| CDS GCA 90 bp | CACTGTGCGTTGCTTGTTAGGCAGGTACACTTTGACAGTGCCAACTaGCCGAGATGGCTCAGCCCCACTAACAGGAGGGCCTCGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HCALLVRQVHFDSAN*PRWLSPTNRRASWW Trigger: CCACCACGAGGCCCTCCTGTTAGTGGGGCTGAGCCATCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
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| CDS GCA 90 bp | GCGGTAGGTTGGGCCACCTTGAGCACTTTCACAGCTACATCGCCATaGCAACGCCCCCGAAACACAGTGCCAAAAGAGCCTGTCCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: AVGWATLSTFTATSP*QRPRNTVPKEPVPI Trigger: GATCGGGACAGGCTCTTTTGGCACTGTGTTTCGGGGGCGTTGGCATGGCGATGTAGCTGTGAAAGTGCTCAAGGTGGCCCAACCTACCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS CCA 90 bp | GAGAAGTGCTCCTGGTCACGTTGCTGGGTAAAGGGGCTGGGACCCTaGGGGGTTAGCAGCTCATTCACAGAGAGATTTGAGGGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKCSWSRCWVKGLGP*GVSSSFTERFEGAS Trigger: GGAGGCTCCCTCAAATCTCTCTGTGAATGAGCTGCTAACCCCCCAGGGTCCCAGCCCCTTTACCCAGCAACGTGACCAGGAGCACTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001155.11 ENSMUST00000122850.2 ENSMUST00000136451.8 |
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| CDS GCA 90 bp | CGTGTCTTCCTGAGCACCTGCATCTCATTCTTGAAGGCCTGGGCCTaGTCAGCGGTAGGTTGGGCCACCTTGAGCACTTTCACAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: RVFLSTCISFLKAWA*SAVGWATLSTFTAT Trigger: TGTAGCTGTGAAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGGAAGACACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
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| CDS CCA 90 bp | ACATGCCGTGTCTTCCTGAGCACCTGCATCTCATTCTTGAAGGCCTaGGCCTGCTCAGCGGTAGGTTGGGCCACCTTGAGCACTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TCRVFLSTCISFLKA*ACSAVGWATLSTFT Trigger: TGTGAAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGGAAGACACGGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS GCA 90 bp | GCACTTTCACAGCTACATCGCCATGCCAACGCCCCCGAAACACAGTaGCAAAAGAGCCTGTCCCGATCCTCTTCAACAGCTGTACCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALSQLHRHANAPETQ*QKSLSRSSSTAVPH Trigger: GTGAGGTACAGCTGTTGAAGAGGATCGGGACAGGCTCTTTTGGCACTGTGTTTCGGGGGCGTTGGCATGGCGATGTAGCTGTGAAAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS GCA 90 bp | TGCCTAAGATTGTTTTCAAGATGGGCTGAGGTAGGACTGGGCAGCTaGCATAGGCCTCCTTATCTGGCTTCTGTGGGAGGGCAGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLRLFSRWAEVGLGS*HRPPYLASVGGQPL Trigger: AAGGGGCTGCCCTCCCACAGAAGCCAGATAAGGAGGCCTATGGCAGCTGCCCAGTCCTACCTCAGCCCATCTTGAAAACAATCTTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS CCA 90 bp | TTGCTTGTTAGGCAGGTACACTTTGACAGTGCCAACTGCCCGAGATaGCTCAGCCCCACTAACAGGAGGGCCTCGTGGTGGTTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVRQVHFDSANCPR*LSPTNRRASWWFHV Trigger: AACATGGAACCACCACGAGGCCCTCCTGTTAGTGGGGCTGAGCCATCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCTGAGGTGCTCCTGGTCACGTaGCTGGGTAAAGGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFWGPSNFPGYGIGNPEVLLVT*LGKGAG Trigger: CCCAGCCCCTTTACCCAGCAACGTGACCAGGAGCAC...CTCAGGATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS-3UTR CAA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCGCACTCCGCTCAATCTaGGGGAGTGACCGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYWLVGRCALAWYAEIGSALRSI*GSDRCS Trigger: ACTGCAGCGGTCACTCCCCAAGATTGAGCGGAGTGC...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS TCA 90 bp | CAAAATTGTGCATGGTCAGTGGCACATCTTCTAGGACCTCCACAATaGGCTCCTCACCATCCAGAGGCGCAATGGCTGTGTCCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNCAWSVAHLLGPPQ*APHHPEAQWLCPRQ Trigger: CTGCCTGGGACACAGCCATTGCGCCTCTGGATGGTGAGGAGCTCATTGTGGAGGTCCTAGAAGATGTGCCACTGACCATGCACAATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTGAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGCTGCTCAGCGGTAGGTaGGGCCACCTTGAGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: NPEAVSRQRQNSYWLVGRLLSGR*GHLEHF Trigger: AAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCAG...CCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTCAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS CCA 90 bp | GTCCTCAACAAAATTCTGAGCACCTGCATCTCATTCTTGAAGGCCTaGGCCTGCTCAGCGGTAGGTTGGGCCACCTTGAGCACTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VLNKILSTCISFLKA*ACSAVGWATLSTFT Trigger: TGTGAAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGAATTTTGTTGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCGAAGTCACCAATCTTGACTGTGAGCCCCTCATGTAAGAAGATATTGTTGGTGCTCCTGGTCACGTaGCTGGGTAAAGGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPKSPILTVSPSCKKILLVLLVT*LGKGAG Trigger: CCCAGCCCCTTTACCCAGCAACGTGACCAGGAGCAC...CAACAATATCTTCTTACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGCCGAAGTCACCAATCTaGACTGTGAGCCCCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: YWLVGRCALAWYAEIGSLPKSPI*TVSPSC Trigger: ACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGG...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR CAA 90 bp | TTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTGCACTCCGCTCAATCTaGGGGAGTGACCGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LWRKQETSVFGVPQISQGALRSI*GSDRCS Trigger: ACTGCAGCGGTCACTCCCCAAGATTGAGCGGAGTGC...ACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS GCA 90 bp | AACCCCGGCCGAGTCATGAAACCCATGAACAGCAAAATGTTGACATaGCGTGTCTTCCTGAGCACCTGCATCTCATTCTTGAAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NPGRVMKPMNSKMLT*RVFLSTCISFLKAW Trigger: CCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGGAAGACACGGCATGTCAACATTTTGCTGTTCATGGGTTTCATGACTCGGCCGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS GCA 90 bp | AACAAAATTCTGAGCACCTGCATCTCATTCTTGAAGGCCTGGGCCTaGTCAGCGGTAGGTTGGGCCACCTTGAGCACTTTCACAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: NKILSTCISFLKAWA*SAVGWATLSTFTAT Trigger: TGTAGCTGTGAAAGTGCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGAATTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCAATTACTGAAGATTTTGCTGAGGTCCGGAGACAGATAGCCACGGCCCACGTCTTCCGTACAAAATaGTGCATGGTCAGTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GAITEDFAEVRRQIATAHVFRTK*CMVSGT Trigger: TGTGCCACTGACCATGCACAATTTTGTACGGAAGAC...GTGGGCCGTGGCTATCTGTCTCCGGACCTCAGCAAAATCTTCAGTAATTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAACAGACGGTGGGGACCTaGGAGGAACAATGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EWNPCTESQPLEIKQLSKQTVGT*EEQCWW Trigger: CCACCAGCATTGTTCCTCCAAGGTCCCCACCGTCTG...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTCACACCACTGTGTGATGATGGCAAACCCCGGCCGAGTCATGAAACCCATTGTTCTGAAGGTAACTaGGAATGTGGGGACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLTPLCDDGKPRPSHETHCSEGN*ECGDFL Trigger: GAGGAAGTCCCCACATTCCAAGTTACCTTCAGAACA...ATGGGTTTCATGACTCGGCCGGGGTTTGCCATCATCACACAGTGGTGTGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | TATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCTGAGGCGCCTCATGGCTTaGGGGCAATTACTGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: YWLVGRCALAWYAEIGSLRRLMA*GQLLKI Trigger: AATCTTCAGTAATTGCCCCAAAGCCATGAGGCGCCT...CAGGGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCCAATTACTGAAGATTTaGCTGAGGTCCGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAVSRQRQNSYWLVGRCAQLLKI*LRSGDR Trigger: TCTGTCTCCGGACCTCAGCAAAATCTTCAGTAATTG...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR CAA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAACCTGCATCTCATTCTaGAAGGCCTGGGCCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NYPQTQEETKLWRKQETSTCISF*KAWACS Trigger: TGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGT...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | GTCACAGCCATTGGAGATAAAACAGCTCTCCAAATTAGAACTATCCCCAAACCCACCTGCATCTCATTCTaGAAGGCCTGGGCCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTAIGDKTALQIRTIPKPTCISF*KAWACS Trigger: TGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGT...GGGTTTGGGGATAGTTCTAATTTGGAGAGCTGTTTTATCTCCAATGGCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGGAATCCTTGCACTGAGTCACAGCCATTGGAGATAAAACAGCTCTCCAAACCGAAGTCACCAATCTaGACTGTGAGCCCCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: EWNPCTESQPLEIKQLSKPKSPI*TVSPSC Trigger: ACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGG...TTTGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR CAA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCCAATTACTGAAGATTTaGCTGAGGTCCGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SYWLVGRCALAWYAEIGSQLLKI*LRSGDR Trigger: TCTGTCTCCGGACCTCAGCAAAATCTTCAGTAATTG...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR CAA 90 bp | TTATGGAGAAAGCAGGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTAGGCGCCTCATGGCTTaGGGGCAATTACTGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LWRKQETSVFGVPQISQGRRLMA*GQLLKI Trigger: AATCTTCAGTAATTGCCCCAAAGCCATGAGGCGCCT...ACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCCTGCTTTCTCCATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR CAA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATATGAACAGCAAAATGTaGACATGCCGTGTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNMNSKM*TCRVFL Trigger: CAGGAAGACACGGCATGTCAACATTTTGCTGTTCAT...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGTATCAAGGCAGAGGCAGAACAGTTATTGGCTGGTAGGTCGGTGTGCCTCATGTAAGAAGATATaGTTGGACTTTAGGTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: EAVSRQRQNSYWLVGRCASCKKI*LDFRSR Trigger: TCGAGACCTAAAGTCCAACAATATCTTCTTACATGA...GGCACACCGACCTACCAGCCAATAACTGTTCTGCCTCTGCCTTGATACTGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS-3UTR CAA 90 bp | GGAGACCTCAGTTTTTGGGGTCCCTCAAATTTCCCAGGGTATGGGATAGGGAATCCATGTTGCCTAAGATaGTTTTCAAGATGGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDLSFWGPSNFPGYGIGNPCCLR*FSRWAE Trigger: CTCAGCCCATCTTGAAAACAATCTTAGGCAACATGG...ATTCCCTATCCCATACCCTGGGAAATTTGAGGGACCCCAAAAACTGAGGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | AACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTCAGTCTTCCGTACAAAATaGTGCATGGTCAGTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NYPQTQEETKLWRKQETSVFRTK*CMVSGT Trigger: TGTGCCACTGACCATGCACAATTTTGTACGGAAGAC...TGAGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTATCCCCAAACCCAAGAGGAGACCAAATTATGGAGAAAGCAGGAGACCTTGTTCTGAAGGTAACTaGGAATGTGGGGACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTIPKPKRRPNYGESRRPCSEGN*ECGDFL Trigger: GAGGAAGTCCCCACATTCCAAGTTACCTTCAGAACA...AGGTCTCCTGCTTTCTCCATAATTTGGTCTCCTCTTGGGTTTGGGGATAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACCAGACGGTGGGGACCTaGGAGGAACAATGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVTFTILRLNSQVNQHTYQTVGT*EEQCWW Trigger: CCACCAGCATTGTTCCTCCAAGGTCCCCACCGTCTG...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
||
| CDS-3UTR CAA 90 bp | AGTTATTGGCTGGTAGGTCGGTGTGCCTTGGCATGGTATGCTGAAATTGGCTCCTCATGTAAGAAGATATaGTTGGACTTTAGGTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SYWLVGRCALAWYAEIGSSCKKI*LDFRSR Trigger: TCGAGACCTAAAGTCCAACAATATCTTCTTACATGA...GGAGCCAATTTCAGCATACCATGCCAAGGCACACCGACCTACCAGCCAATAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000128250.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCGAAGTCACCAATCTTGACTGTGAGCCCCTCATGTAAGAAGATATTGTTGCGTGGTGGTTCCATGTaGCCTAAGATTGTTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPKSPILTVSPSCKKILLRGGSM*PKIVFK Trigger: CTTGAAAACAATCTTAGGCAACATGGAACCACCACG...CAACAATATCTTCTTACATGAGGGGCTCACAGTCAAGATTGGTGACTTCGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTACTTTCACCATCCTGAGATTAAATTCACAGGTAAATCAACACACATACGTCTTCCGTACAAAATaGTGCATGGTCAGTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SVTFTILRLNSQVNQHTYVFRTK*CMVSGT Trigger: TGTGCCACTGACCATGCACAATTTTGTACGGAAGAC...GTATGTGTGTTGATTTACCTGTGAATTTAATCTCAGGATGGTGAAAGTAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120356.8 ENSMUST00000122312.8 |
||
| CDS GCA 72 bp | GGGTTCGGGTCCATCCATAGCACAGACCCTGAGGGCTaGTCTAAGGGCTGTGCCCCACTCCACCGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GFGSIHSTDPEG*SKGCAPLHRVF Trigger: GAAGACACGGTGGAGTGGGGCACAGCCCTTAGAGCAGCCCTCAGGGTCTGTGCTATGGATGGACCCGAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128250.3 |
||
| CDS CCA 72 bp | AGGCAGGTACACTTTGACAGTGCCAACTGCCCGAGATaGCTCAGCCCCACTAACAGGAGGGCCTCGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RQVHFDSANCPR*LSPTNRRASWW Trigger: CCACCACGAGGCCCTCCTGTTAGTGGGGCTGAGCCATCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS CCA 72 bp | TGGGCAGCTGCCATAGGCCTCCTTATCTGGCTTCTGTaGGAGGGCAGCCCCTTGGTCCTTTGGAGGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WAAAIGLLIWLL*EGSPLVLWRLH Trigger: ATGGAGCCTCCAAAGGACCAAGGGGCTGCCCTCCCACAGAAGCCAGATAAGGAGGCCTATGGCAGCTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS CCA 72 bp | GTCTTCCTGAGCACCTGCATCTCATTCTTGAAGGCCTaGGCCTGCTCAGCGGTAGGTTGGGCCACCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFLSTCISFLKA*ACSAVGWATLS Trigger: GCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGGAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS CAA 90 bp | TCCCGGACAGTCACCACTGTGCGTTGCTTGTTAGGCAGGTACACTTaGACAGTGCCAACTGCCCGAGATGGCTCAGCCCCACTAACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRTVTTVRCLLGRYT*TVPTARDGSAPLTG Trigger: TCCTGTTAGTGGGGCTGAGCCATCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTGGTGACTGTCCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS GCA 72 bp | TTGCTTGTTAGGCAGGTACACTTTGACAGTGCCAACTaGCCGAGATGGCTCAGCCCCACTAACAGGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLVRQVHFDSAN*PRWLSPTNRRA Trigger: GGCCCTCCTGTTAGTGGGGCTGAGCCATCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS GCA 72 bp | CAGCTACATCGCCATGCCAACGCCCCCGAAACACAGTaGCAAAAGAGCCTGTCCCGATCCTCTTCAACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLHRHANAPETQ*QKSLSRSSSTA Trigger: AGCTGTTGAAGAGGATCGGGACAGGCTCTTTTGGCACTGTGTTTCGGGGGCGTTGGCATGGCGATGTAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS GCA 72 bp | TGGGCCACCTTGAGCACTTTCACAGCTACATCGCCATaGCAACGCCCCCGAAACACAGTGCCAAAAGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WATLSTFTATSP*QRPRNTVPKEP Trigger: AGGCTCTTTTGGCACTGTGTTTCGGGGGCGTTGGCATGGCGATGTAGCTGTGAAAGTGCTCAAGGTGGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS CCA 72 bp | ACAGATCCTGGATGCTGTGGTAGAACTGTCGGCGGTTaGTACTCATGTCAACGCAGACGGTGGGGACCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TDPGCCGRTVGG*YSCQRRRWGPW Trigger: CCAAGGTCCCCACCGTCTGCGTTGACATGAGTACCAACCGCCGACAGTTCTACCACAGCATCCAGGATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS CAA 72 bp | GTCACCACTGTGCGTTGCTTGTTAGGCAGGTACACTTaGACAGTGCCAACTGCCCGAGATGGCTCAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTTVRCLLGRYT*TVPTARDGSAP Trigger: TGGGGCTGAGCCATCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS CAA 90 bp | AAAATGTTGACATGCCGTGTCTTCCTGAGCACCTGCATCTCATTCTaGAAGGCCTGGGCCTGCTCAGCGGTAGGTTGGGCCACCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KMLTCRVFLSTCISF*KAWACSAVGWATLS Trigger: GCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGGAAGACACGGCATGTCAACATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001155.11 |
||
| CDS TCA 72 bp | GCATGGTCAGTGGCACATCTTCTAGGACCTCCACAATaGGCTCCTCACCATCCAGAGGCGCAATGGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AWSVAHLLGPPQ*APHHPEAQWLC Trigger: ACACAGCCATTGCGCCTCTGGATGGTGAGGAGCTCATTGTGGAGGTCCTAGAAGATGTGCCACTGACCATGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS GCA 72 bp | TTGTTTTCAAGATGGGCTGAGGTAGGACTGGGCAGCTaGCATAGGCCTCCTTATCTGGCTTCTGTGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFSRWAEVGLGS*HRPPYLASVGG Trigger: CCCTCCCACAGAAGCCAGATAAGGAGGCCTATGGCAGCTGCCCAGTCCTACCTCAGCCCATCTTGAAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS CCA 72 bp | AAAATTCTGAGCACCTGCATCTCATTCTTGAAGGCCTaGGCCTGCTCAGCGGTAGGTTGGGCCACCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KILSTCISFLKA*ACSAVGWATLS Trigger: GCTCAAGGTGGCCCAACCTACCGCTGAGCAGGCCCAGGCCTTCAAGAATGAGATGCAGGTGCTCAGAATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS CAA 72 bp | CTCATGCCTTCCCGGACAGTCACCACTGTGCGTTGCTaGTTAGGCAGGTACACTTTGACAGTGCCAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LMPSRTVTTVRC*LGRYTLTVPTA Trigger: GGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTGGTGACTGTCCGGGAAGGCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS CAA 72 bp | GACACTCATGCCTTCCCGGACAGTCACCACTGTGCGTaGCTTGTTAGGCAGGTACACTTTGACAGTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DTHAFPDSHHCA*LVRQVHFDSAN Trigger: GTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTGGTGACTGTCCGGGAAGGCATGAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS CAA 72 bp | GCCAAGGACTTCCGCTCCCGCTGTTCTGAAGGTAACTaGGAATGTGGGGACTTCCTCCCTGAAGACACACTA | + |
|
Preference number: 6 (lower is better) Translates to: AKDFRSRCSEGN*ECGDFLPEDTL Trigger: TAGTGTGTCTTCAGGGAGGAAGTCCCCACATTCCAAGTTACCTTCAGAACAGCGGGAGCGGAAGTCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
||
| CDS CAA 90 bp | AGAGTCATAGACACTCATGCCTTCCCGGACAGTCACCACTGTGCGTaGCTTGTTAGGCAGGTACACTTTGACAGTGCCAACTGCCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVIDTHAFPDSHHCA*LVRQVHFDSANCPR Trigger: TCTCGGGCAGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTGGTGACTGTCCGGGAAGGCATGAGTGTCTATGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS GCA 72 bp | ACACTCATGCCTTCCCGGACAGTCACCACTGTGCGTTaGTTGTTAGGCAGGTACACTTTGACAGTGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: TLMPSRTVTTVR*LLGRYTLTVPT Trigger: AGTTGGCACTGTCAAAGTGTACCTGCCTAACAAGCAACGCACAGTGGTGACTGTCCGGGAAGGCATGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
||
| CDS CCA 72 bp | GTGGTGGTTCCATGTTGCCTAAGATTGTTTTCAAGATaGGCTGAGGTAGGACTGGGCAGCTGCCATAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVVPCCLRLFSR*AEVGLGSCHRP Trigger: AGGCCTATGGCAGCTGCCCAGTCCTACCTCAGCCCATCTTGAAAACAATCTTAGGCAACATGGAACCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136451.8 |
||
| CDS CAA 90 bp | TTTTCATCTGCCAAGGACTTCCGCTCCCGCTGTTCTGAAGGTAACTaGGAATGTGGGGACTTCCTCCCTGAAGACACACTAGCTGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: FSSAKDFRSRCSEGN*ECGDFLPEDTLAGL Trigger: TAGCCCAGCTAGTGTGTCTTCAGGGAGGAAGTCCCCACATTCCAAGTTACCTTCAGAACAGCGGGAGCGGAAGTCCTTGGCAGATGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001155.11 ENSMUST00000136451.8 |
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| CDS GCA 72 bp | AAGGCCAGGCTGAAGAATGTCTTCCGTACAAAATTGTaGATGGTCAGTGGCACATCTTCTAGGACCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: KARLKNVFRTKL*MVSGTSSRTST Trigger: TGTGGAGGTCCTAGAAGATGTGCCACTGACCATGCACAATTTTGTACGGAAGACATTCTTCAGCCTGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001155.11 ENSMUST00000120356.8 ENSMUST00000122312.8 ENSMUST00000122850.2 ENSMUST00000136451.8 |
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