RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046532

Ensembl transcript IDs: ENSMUST00000052837.9

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTGCCCAGTaGAGACCAAGAGCCGCTGTGAGAACTGAAGCCCCAGCGAAAGAA +
Preference number: 1 (lower is better)
Translates to: KENRTLALGAGPAAQ*RPRAAVRTEAPAKE
Trigger: TTCTTTCGCTGGGGCTTCAGTTCTCACAGCGGCTCTTGGTCTCCACTGGGCAGCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp CAATGCCTCAGATCCCATGAAGAGGCTGCTGGCCAGTCCTTTGGGTaGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCT +
Preference number: 1 (lower is better)
Translates to: QCLRSHEEAAGQSFG*APGPTSGFLPIAIP
Trigger: AGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGGACTGGCCAGCAGCCTCTTCATGGGATCTGAGGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp ACTACACGACTCTTCTTGAATCCCAGAGTTCGTGACTTTGGCAGCTaGCTGCTGTCCTGCCCAGTTGGGCCTTCTCCATGGTTCTCCTCT +
Preference number: 1 (lower is better)
Translates to: TTRLFLNPRVRDFGS*LLSCPVGPSPWFSS
Trigger: AGAGGAGAACCATGGAGAAGGCCCAACTGGGCAGGACAGCAGCCAGCTGCCAAAGTCACGAACTCTGGGATTCAAGAAGAGTCGTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp CACCCAGTAGCAAGAGCACCTCAATTGCAGGGGAAAGAATTGATGTaGCAGAAGGAGCGTTTGCTCCAGGTTCCCAAGACCAGGCAACTG +
Preference number: 1 (lower is better)
Translates to: HPVARAPQLQGKELM*QKERLLQVPKTRQL
Trigger: CAGTTGCCTGGTCTTGGGAACCTGGAGCAAACGCTCCTTCTGTCACATCAATTCTTTCCCCTGCAATTGAGGTGCTCTTGCTACTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp TTCTTGAATCCCAGAGTTCGTGACTTTGGCAGCTGGCTGCTGTCCTaGCCAGTTGGGCCTTCTCCATGGTTCTCCTCTTTTTCTTGTCCT +
Preference number: 1 (lower is better)
Translates to: FLNPRVRDFGSWLLS*PVGPSPWFSSFSCP
Trigger: AGGACAAGAAAAAGAGGAGAACCATGGAGAAGGCCCAACTGGGCAGGACAGCAGCCAGCTGCCAAAGTCACGAACTCTGGGATTCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp TATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATaGGAGTCACGGTGGATAGAATGTTTCAGTGGTCCTGCACCCTCT +
Preference number: 1 (lower is better)
Translates to: YGCSLFVATPARSVQ*ESRWIECFSGPAPS
Trigger: AGAGGGTGCAGGACCACTGAAACATTCTATCCACCGTGACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp ACAAAAGATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTaGGGCTGGTCCTGCTGCCCAGTGGAGACCAAGAGCCGCTGTGAG +
Preference number: 1 (lower is better)
Translates to: TKDSKITKREQNTSA*GWSCCPVETKSRCE
Trigger: CTCACAGCGGCTCTTGGTCTCCACTGGGCAGCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATCTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp GAGTCACGGTGGATAGAATGTTTCAGTGGTCCTGCACCCTCTGACTaGGAGGGGACAACTATGGTGGAGATTCGAAGTAACTTTGGCCAA +
Preference number: 1 (lower is better)
Translates to: ESRWIECFSGPAPSD*EGTTMVEIRSNFGQ
Trigger: TTGGCCAAAGTTACTTCGAATCTCCACCATAGTTGTCCCCTCTCAGTCAGAGGGTGCAGGACCACTGAAACATTCTATCCACCGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp TGTGACAGAAGGAGCGTTTGCTCCAGGTTCCCAAGACCAGGCAACTaGCCTTCTCTAACAAGGATGGTGAAAACCAAGGAAATAGCCTTC +
Preference number: 1 (lower is better)
Translates to: CDRRSVCSRFPRPGN*PSLTRMVKTKEIAF
Trigger: GAAGGCTATTTCCTTGGTTTTCACCATCCTTGTTAGAGAAGGGCAGTTGCCTGGTCTTGGGAACCTGGAGCAAACGCTCCTTCTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp AACTACACTGCAACTGAGCACTCTAGGACTCAGGGACAAAGGCTGTaGGGAGGTAATGGTTATCCATCTGCCCTCCTTGTCCTCTTTTCT +
Preference number: 1 (lower is better)
Translates to: NYTATEHSRTQGQRL*GGNGYPSALLVLFS
Trigger: AGAAAAGAGGACAAGGAGGGCAGATGGATAACCATTACCTCCCCACAGCCTTTGTCCCTGAGTCCTAGAGTGCTCAGTTGCAGTGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp CTATCTCTAATGGGAGAATGGCTAAGCCATCACTTCCTTTTCCTCTaGCTCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATAT +
Preference number: 1 (lower is better)
Translates to: LSLMGEWLSHHFLFL*LQSQSSAMAHTWKY
Trigger: ATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGAGTCAGAGGAAAAGGAAGTGATGGCTTAGCCATTCTCCCATTAGAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp TGGCATAAGGTGAGTAAACATTTGCTTGGTTGGCACACAGCACAGTaGTATAAACAAGCACAATTGACACTGGGCCACAAGAGGATCATC +
Preference number: 1 (lower is better)
Translates to: WHKVSKHLLGWHTAQ*YKQAQLTLGHKRII
Trigger: GATGATCCTCTTGTGGCCCAGTGTCAATTGTGCTTGTTTATAGCACTGTGCTGTGTGCCAACCAAGCAAATGTTTACTCACCTTATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp AGGAGGAAATTGACATTTCTCCACTTGGGAGGAATATATTGTCTCTaGAGGACAAGGGCAAGATGCCCATTTTGTCTGGTCCCTTTGATG +
Preference number: 1 (lower is better)
Translates to: RRKLTFLHLGGIYCL*RTRARCPFCLVPLM
Trigger: CATCAAAGGGACCAGACAAAATGGGCATCTTGCCCTTGTCCTCCAGAGACAATATATTCCTCCCAAGTGGAGAAATGTCAATTTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp GAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTaGACAATTAACCTCAGCAACTACCCAAAGGACAGAGTGAAGCTT +
Preference number: 1 (lower is better)
Translates to: ECGQRRMLAEAHFST*TINLSNYPKDRVKL
Trigger: AAGCTTCACTCTGTCCTTTGGGTAGTTGCTGAGGTTAATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp GTCTCTGGAGGACAAGGGCAAGATGCCCATTTTGTCTGGTCCCTTTaGTGCTTTCTTTCCAATTTTTCTAAGGGCTCCAGAAATTTACTG +
Preference number: 1 (lower is better)
Translates to: VSGGQGQDAHFVWSL*CFLSNFSKGSRNLL
Trigger: CAGTAAATTTCTGGAGCCCTTAGAAAAATTGGAAAGAAAGCATCAAAGGGACCAGACAAAATGGGCATCTTGCCCTTGTCCTCCAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp AATTTCACCACCCTTTCCACATTCATCCGTCTTAAGCTAGTAAAGTaGAATACATCATGTACCCTACCCTTTCCTCTTCCACCCCTTTGC +
Preference number: 1 (lower is better)
Translates to: NFTTLSTFIRLKLVK*NTSCTLPFPLPPLC
Trigger: GCAAAGGGGTGGAAGAGGAAAGGGTAGGGTACATGATGTATTGCACTTTACTAGCTTAAGACGGATGAATGTGGAAAGGGTGGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp AAAGAAGTGTACAAGCTTTACCACCTTGGCTTAAATGCATTTTGGTaGAGTTCAGGGCCACTGAACACTGAAGACTTGTGCAGGGAGAAT +
Preference number: 1 (lower is better)
Translates to: KEVYKLYHLGLNAFW*SSGPLNTEDLCREN
Trigger: ATTCTCCCTGCACAAGTCTTCAGTGTTCAGTGGCCCTGAACTTCACCAAAATGCATTTAAGCCAAGGTGGTAAAGCTTGTACACTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp TCTCTAAATTTGCCATGGCATAAGGTGAGTAAACATTTGCTTGGTTaGCACACAGCACAGTGCTATAAACAAGCACAATTGACACTGGGC +
Preference number: 1 (lower is better)
Translates to: SLNLPWHKVSKHLLG*HTAQCYKQAQLTLG
Trigger: GCCCAGTGTCAATTGTGCTTGTTTATAGCACTGTGCTGTGTGCCAACCAAGCAAATGTTTACTCACCTTATGCCATGGCAAATTTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp GGGTCTCTAGGTCCTTTAAAAGCAGAGGAAAGGATGATTGCACTATaGCATCATCATTCACTATCTCTAATGGGAGAATGGCTAAGCCAT +
Preference number: 1 (lower is better)
Translates to: GSLGPLKAEERMIAL*HHHSLSLMGEWLSH
Trigger: ATGGCTTAGCCATTCTCCCATTAGAGATAGTGAATGATGATGCCATAGTGCAATCATCCTTTCCTCTGCTTTTAAAGGACCTAGAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp GAACTTTCCAAGAACAATAATATTGCCTGTGGCATAGAAAATCTATaGAACAAAGAAGCCAACTCCCGTGTCAGCTCAGAGTCCACACAC +
Preference number: 1 (lower is better)
Translates to: ELSKNNNIACGIENL*NKEANSRVSSESTH
Trigger: GTGTGTGGACTCTGAGCTGACACGGGAGTTGGCTTCTTTGTTCCATAGATTTTCTATGCCACAGGCAATATTATTGTTCTTGGAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp ATTTGCTTGGTTGGCACACAGCACAGTGCTATAAACAAGCACAATTaGCACTGGGCCACAAGAGGATCATCACAGATTCAAAGAAATACA +
Preference number: 1 (lower is better)
Translates to: ICLVGTQHSAINKHN*HWATRGSSQIQRNT
Trigger: TGTATTTCTTTGAATCTGTGATGATCCTCTTGTGGCCCAGTGTCAATTGTGCTTGTTTATAGCACTGTGCTGTGTGCCAACCAAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp TTGGGGTCAACCTGCTCTTTAATGGCAATAGCCATTAACAACAACTaGAGTTTCCCACAGAGAAACAGGATGAACAAAAACAGTGACTCC +
Preference number: 1 (lower is better)
Translates to: LGSTCSLMAIAINNN*SFPQRNRMNKNSDS
Trigger: GGAGTCACTGTTTTTGTTCATCCTGTTTCTCTGTGGGAAACTTCAGTTGTTGTTAATGGCTATTGCCATTAAAGAGCAGGTTGACCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp TTATTTCTGCCAATGGGTATGCTGGATGGAAAGGAAAAAGTCCTGTaGTTTCTGGTTCTAGTGTCTTCATTTTTCTCAGCTGGGTTACTT +
Preference number: 1 (lower is better)
Translates to: LFLPMGMLDGKEKVL*FLVLVSSFFSAGLL
Trigger: AAGTAACCCAGCTGAGAAAAATGAAGACACTAGAACCAGAAAGCACAGGACTTTTTCCTTTCCATCCAGCATACCCATTGGCAGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp TTGCTACACTCAACCAGGATTGGAAGCCAATTAATACACATTACCTaGTTCCTGGCCAGATTAAATTGGGTCATATTAAAGCTGGGTCAA +
Preference number: 1 (lower is better)
Translates to: LLHSTRIGSQLIHIT*FLARLNWVILKLGQ
Trigger: TTGACCCAGCTTTAATATGACCCAATTTAATCTGGCCAGGAAGCAGGTAATGTGTATTAATTGGCTTCCAATCCTGGTTGAGTGTAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 90 bp AAAAATGTAACTGCAACCTCTCTTACAAGTACATGGCATCAGATATaGCCTGGAACCAAATATAAAGGTGCAGAGAAAGGTAAAGCTATC +
Preference number: 1 (lower is better)
Translates to: KNVTATSLTSTWHQI*PGTKYKGAEKGKAI
Trigger: GATAGCTTTACCTTTCTCTGCACCTTTATATTTGGTTCCAGGTCATATCTGATGCCATGTACTTGTAAGAGAGGTTGCAGTTACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 90 bp GTTTTTAAATGTAACCTGTCAGCTTCAGTTTTTGTCAAGCAGGGTTaGATTACCATATCACCCATTGTATATATCCTCCCTTCCTTGTTA +
Preference number: 1 (lower is better)
Translates to: VFKCNLSASVFVKQG*ITISPIVYILPSLL
Trigger: TAACAAGGAAGGGAGGATATATACAATGGGTGATATGGTAATCCAACCCTGCTTGACAAAAACTGAAGCTGACAGGTTACATTTAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 90 bp ATACAAATACTCATTTACAATATATTTCAACTTTCTGCCTTAAACTaGAGAGAACTTTTTGTGCTGTCCAAACTGGGCAGAAATGAGGGT +
Preference number: 1 (lower is better)
Translates to: IQILIYNIFQLSALN*RELFVLSKLGRNEG
Trigger: ACCCTCATTTCTGCCCAGTTTGGACAGCACAAAAAGTTCTCTGCAGTTTAAGGCAGAAAGTTGAAATATATTGTAAATGAGTATTTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp GTGAGCTGCCTGCGGATGAGAGTTGAAAGCACTACACGACTCTTCTaGAATCCCAGAGTTCGTGACTTTGGCAGCTGGCTGCTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: VSCLRMRVESTTRLF*NPRVRDFGSWLLSC
Trigger: GCAGGACAGCAGCCAGCTGCCAAAGTCACGAACTCTGGGATTCAAGAAGAGTCGTGTAGTGCTTTCAACTCTCATCCGCAGGCAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAAGATGCTGTGGCTGCTaGCCTGCTAGCCTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLRCCGC*PASLCG
Trigger: ACCACAAAGGCTAGCAGGCCAGCAGCCACAGCATCT...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACACTTCCTTTTCCTCTaGCTCCAGTCACAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLHFLFL*LQSQSS
Trigger: GGAGCTTTGTGACTGGAGTCAGAGGAAAAGGAAGTG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCCTCTTCCACCCCTTTaGAAGGCCTCAACACCAGGC +
Preference number: 2 (lower is better)
Translates to: DSKITKREQNTSAWGWSCPLPPL*KASTPG
Trigger: GCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCGGAATATATTGTCTCTaGAGGACAAGGGCAAGATGC +
Preference number: 2 (lower is better)
Translates to: PLPPLCKASTPGPRREEIGIYCL*RTRARC
Trigger: GCATCTTGCCCTTGTCCTCCAGAGACAATATATTCC...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCGCCCATCTAGCCAGATaGTATTCATCTGGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: PLPPLCKASTPGPRREEIAHLAR*YSSGFR
Trigger: TCTAAAGCCAGATGAATACCATCTGGCTAGATGGGC...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCCTATTGAAAGTCAATTaGGGGTGGAAGCAGAGGTTA +
Preference number: 2 (lower is better)
Translates to: PLPPLCKASTPGPRREEILLKVN*GWKQRL
Trigger: TAACCTCTGCTTCCACCCTCAATTGACTTTCAATAG...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCAAACATTTGCTTGGTTaGCACACAGCACAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: PLPPLCKASTPGPRREEIKHLLG*HTAQCY
Trigger: ATAGCACTGTGCTGTGTGCCAACCAAGCAAATGTTT...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCTGTGGAGTATCATTGTaGTTATCATGTGGATGGTGG +
Preference number: 2 (lower is better)
Translates to: PLPPLCKASTPGPRREEICGVSL*LSCGWW
Trigger: CCACCATCCACATGATAACCACAATGATACTCCACA...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAGGAAAGGGAACAAGGTaGGTTTTGGGTATTAGGGTT +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLGKGTR*VLGIRV
Trigger: AACCCTAATACCCAAAACCCACCTTGTTCCCTTTCC...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACTTGCCCTGAGTTTATaGGTGCAGTCTATTTGTAGC +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLLALSL*VQSICS
Trigger: GCTACAAATAGACTGCACCCATAAACTCAGGGCAAG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACACAGAGAAACAGGATaGACAAAAACAGTGACTCCT +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLHRETG*TKTVTP
Trigger: AGGAGTCACTGTTTTTGTTCATCCTGTTTCTCTGTG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTATTAAATGCATTTTGGTaGAGTTCAGGGCCACTGAAC +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLLNAFW*SSGPLN
Trigger: GTTCAGTGGCCCTGAACTTCACCAAAATGCATTTAA...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCACATCTAAACATAGATaGTGTGGCTGCTGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: LWVQSICSHTGQICPMRVTSKHR*CGCWPA
Trigger: AGCAGGCCAGCAGCCACAGCATCTATGTTTAGATGT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATAGGGCCACTGAACACTaGAGACTTGTGCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNRATEH*RLVQGE
Trigger: TTCTCCCTGCACAAGTCTTCAGTGTTCAGTGGCCCT...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCAGCAGATTCAAAATGTaGCATGGGAGGGTGAAAGAG +
Preference number: 2 (lower is better)
Translates to: LWVQSICSHTGQICPMRVSRFKM*HGRVKE
Trigger: CTCTTTCACCCTCCCATGGCACATTTTGAATCTGCT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCATTGTGGTTATCATGTaGATGGTGGACATACTTTTT +
Preference number: 2 (lower is better)
Translates to: PLPPLCKASTPGPRREEIIVVIM*MVDILF
Trigger: AAAAAGTATGTCCACCATCCACATGATAACCACAAT...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp TGTTCTGAGGAGGAAATTGACATTTCTCCACTTGGGAGGAATATATaGTCTCTGGAGGACAAGGGCAAGATGCCCATTTTGTCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: CSEEEIDISPLGRNI*SLEDKGKMPILSGP
Trigger: GGGACCAGACAAAATGGGCATCTTGCCCTTGTCCTCCAGAGACAATATATTCCTCCCAAGTGGAGAAATGTCAATTTCCTCCTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATAGGGAGGTGAAGAGCTaGGTGAGGAGGAATGATACA +
Preference number: 2 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNREVKS*VRRNDT
Trigger: TGTATCATTCCTCCTCACTCAGCTCTTCACCTCCCT...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAAAAGTGGCCAAGTTTTaGCTAAAGAGAGCATATAGT +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLKVAKF*LKRAYS
Trigger: ACTATATGCTCTCTTTAGCCAAAACTTGGCCACTTT...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCAATGGGTATGCTGGATaGAAAGGAAAAAGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: LWVQSICSHTGQICPMRVNGYAG*KGKSPV
Trigger: CACAGGACTTTTTCCTTTCCATCCAGCATACCCATT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTATGTCACTTGGAAATTTaGAGTTTAGTTGGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLCHLEI*SLVGVA
Trigger: AGCAACACCAACTAAACTCCAAATTTCCAAGTGACA...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTCTTCTTCACTTGTGTaGGAGAACACAGCCAAGCTA +
Preference number: 2 (lower is better)
Translates to: DSKITKREQNTSAWGWSCSSSLV*ENTAKL
Trigger: TAGCTTGGCTGTGTTCTCCCACACAAGTGAAGAAGA...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCTGAGTGAGGAGGAATaGTACAAAGGCAAAAGTAGA +
Preference number: 2 (lower is better)
Translates to: DSKITKREQNTSAWGWSCLSEEE*YKGKSR
Trigger: TCTACTTTTGCCTTTGTATCATTCCTCCTCACTCAG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCAGAGGAAAGGATGATTaGACTATGGCATCATCATTC +
Preference number: 2 (lower is better)
Translates to: LWVQSICSHTGQICPMRVRGKDD*TMASSF
Trigger: GAATGATGATGCCATAGTGCAATCATCCTTTCCTCT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATATTCAAAATGTGCCATaGGAGGGTGAAAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNIQNVP*EGERGR
Trigger: CCTCCCTCTTTCACCCTCCCATGGCACATTTTGAAT...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAGCTATGGCTCACACATaGAAATATGAACATAAATCT +
Preference number: 2 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLAMAHT*KYEHKS
Trigger: AGATTTATGTTCATATTTCCATGTGTGAGCCATAGC...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCATGTGCAGGGAGAATGTaGCTGCATGGGGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSCAGRM*LHGVSR
Trigger: CCTAGAGACCCCATGCAGCCACATTCTCCCTGCACA...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGGCCATTAACAACAACTaGAGTTTCCCACAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLAINNN*SFPQRN
Trigger: GTTTCTCTGTGGGAAACTTCAGTTGTTGTTAATGGC...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCTTTAGACTTTGCCTCTaGAGACTTCAGCAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCFRLCL*RLQQSV
Trigger: TACAGACTGCTGAAGTCTTCAGAGGCAAAGTCTAAA...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGTCTCTAATGGGAGAATaGCTAAGCCATCACTTCCTT +
Preference number: 2 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLSLMGE*LSHHFL
Trigger: AAGGAAGTGATGGCTTAGCCATTCTCCCATTAGAGA...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCTTAGAAATAGAGTGTaGACAGAGAAGGATGTTAGC +
Preference number: 2 (lower is better)
Translates to: DSKITKREQNTSAWGWSCLRNRV*TEKDVS
Trigger: GCTAACATCCTTCTCTGTCCACACTCTATTTCTAAG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp CATTTGCTTGGTTGGCACACAGCACAGTGCTATAAACAAGCACAATaGACACTGGGCCACAAGAGGATCATCACAGATTCAAAGAAATAC +
Preference number: 2 (lower is better)
Translates to: HLLGWHTAQCYKQAQ*TLGHKRIITDSKKY
Trigger: GTATTTCTTTGAATCTGTGATGATCCTCTTGTGGCCCAGTGTCAATTGTGCTTGTTTATAGCACTGTGCTGTGTGCCAACCAAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTTTGTCTGGTCCCTTTaGTGCTTTCTTTCCAATTTT +
Preference number: 2 (lower is better)
Translates to: DSKITKREQNTSAWGWSCFVWSL*CFLSNF
Trigger: AAAATTGGAAAGAAAGCATCAAAGGGACCAGACAAA...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTGGCACACAGCACAGTaGTATAAACAAGCACAATTG +
Preference number: 2 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNWHTAQ*YKQAQL
Trigger: CAATTGTGCTTGTTTATAGCACTGTGCTGTGTGCCA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTGGTGTTGCTTTAATTaGACTGCTGTTTCACTCTTT +
Preference number: 2 (lower is better)
Translates to: DSKITKREQNTSAWGWSCWCCFN*TAVSLF
Trigger: AAAGAGTGAAACAGCAGTGCAATTAAAGCAACACCA...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCCAGGCAGAAGACATCTaGAAAGGGAACAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVQAEDI*KGNKVG
Trigger: ACCCACCTTGTTCCCTTTCCAGATGTCTTCTGCCTG...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCGGCATAGAAAATCTATaGAACAAAGAAGCCAACTCC +
Preference number: 2 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCGIENL*NKEANS
Trigger: GGAGTTGGCTTCTTTGTTCCATAGATTTTCTATGCC...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGGTTGATGAAAGACATTaGGTGAGATGTCTTTTATGC +
Preference number: 2 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLVDERH*VRCLLC
Trigger: GCATAAAAGACATCTCACTCAATGTCTTTCATCAAC...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATCACTGTCGGCTTCTTTaGGAATCCTATGTGTTTATT +
Preference number: 2 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNHCRLL*ESYVFI
Trigger: AATAAACACATAGGATTCCCAAAGAAGCCGACAGTG...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR TCA 90 bp TCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATATGAACATAAATCTGTCTGAGAAAAGCTATTaGAAGTCAATTGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SSHKAPLWLTHGNMNINLSEKSY*KSIEGG
Trigger: TCCACCCTCAATTGACTTTCAATAGCTTTTCTCAGA...CAGATTTATGTTCATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATGAAGAGGCATTCACATaGAGACAAGTTTTCAAACAA +
Preference number: 2 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNEEAFT*RQVFKQ
Trigger: TTGTTTGAAAACTTGTCTGCATGTGAATGCCTCTTC...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp ACTTATAGCTCTCTAAATTTGCCATGGCATAAGGTGAGTAAACATTaGCTTGGTTGGCACACAGCACAGTGCTATAAACAAGCACAATTG +
Preference number: 2 (lower is better)
Translates to: TYSSLNLPWHKVSKH*LGWHTAQCYKQAQL
Trigger: CAATTGTGCTTGTTTATAGCACTGTGCTGTGTGCCAACCAAGCAAATGTTTACTCACCTTATGCCATGGCAAATTTAGAGAGCTATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp GTGAAAGGCCATGTAACAAAAGGAACTAGGAAACAAAGTAGAACCTaGCTACACTCAACCAGGATTGGAAGCCAATTAATACACATTACC +
Preference number: 2 (lower is better)
Translates to: VKGHVTKGTRKQSRT*LHSTRIGSQLIHIT
Trigger: GGTAATGTGTATTAATTGGCTTCCAATCCTGGTTGAGTGTAGCAAGGTTCTACTTTGTTTCCTAGTTCCTTTTGTTACATGGCCTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR GCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCATTCTGCCAATGGGTATaGTGGATGGAAAGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSFCQWV*WMERKK
Trigger: CTTTTTCCTTTCCATCCAGCATACCCATTGGCAGAA...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp GCACGTGCTCCGCCAATCATATTAGTTGGAACATTGATGGCCAAAGAAAGCAAAAACTTCCTAGAGAAATaGATCAAAGAGTCTCTAGTA +
Preference number: 2 (lower is better)
Translates to: ARAPPIILVGTLMAKESKNFLEK*IKESLV
Trigger: TACTAGAGACTCTTTGATCCATTTCTCTAGGAAGTT...TTTGCTTTCTTTGGCCATCAATGTTCCAACTAATATGATTGGCGGAGCACGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp GAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATaGTCACTTGGAAATTTGGAGTTTAGTTGGTGTTGCTTTAATTGC +
Preference number: 2 (lower is better)
Translates to: EAVGIKPCVCCFSLI*SLGNLEFSWCCFNC
Trigger: GCAATTAAAGCAACACCAACTAAACTCCAAATTTCCAAGTGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCTCTCTAAATTTGCCATaGCATAAGGTGAGTAAACAT +
Preference number: 2 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVSLNLP*HKVSKH
Trigger: ATGTTTACTCACCTTATGCCATGGCAAATTTAGAGA...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGCAAGCTTTACCACCTTaGCTTAAATGCATTTTGGTG +
Preference number: 2 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKQALPP*LKCILV
Trigger: CACCAAAATGCATTTAAGCCAAGGTGGTAAAGCTTG...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 90 bp CAGGGTTGGATTACCATATCACCCATTGTATATATCCTCCCTTCCTaGTTAAAGAAGTTGTTTTGCAAGTTTGTTTTTGCTATTAATAGC +
Preference number: 2 (lower is better)
Translates to: QGWITISPIVYILPS*LKKLFCKFVFAINS
Trigger: GCTATTAATAGCAAAAACAAACTTGCAAAACAACTTCTTTAACAAGGAAGGGAGGATATATACAATGGGTGATATGGTAATCCAACCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp CCCAGAGTTCGTGACTTTGGCAGCTGGCTGCTGTCCTaGCCAGTTGGGCCTTCTCCATGGTTCTCCTCTTTT +
Preference number: 3 (lower is better)
Translates to: PRVRDFGSWLLS*PVGPSPWFSSF
Trigger: AAAAGAGGAGAACCATGGAGAAGGCCCAACTGGGCAGGACAGCAGCCAGCTGCCAAAGTCACGAACTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp AAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTaGTGCCCAGTGGAGACCAAGAGCCGCTGTGAGAAC +
Preference number: 3 (lower is better)
Translates to: KREQNTSAWGWS*CPVETKSRCEN
Trigger: GTTCTCACAGCGGCTCTTGGTCTCCACTGGGCAGCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp CTCTTCTTGAATCCCAGAGTTCGTGACTTTGGCAGCTaGCTGCTGTCCTGCCCAGTTGGGCCTTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: LFLNPRVRDFGS*LLSCPVGPSPW
Trigger: CCATGGAGAAGGCCCAACTGGGCAGGACAGCAGCCAGCTGCCAAAGTCACGAACTCTGGGATTCAAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp AGATCCCATGAAGAGGCTGCTGGCCAGTCCTTTGGGTaGGCACCTGGCCCCACATCTGGATTTCTCCCTATT +
Preference number: 3 (lower is better)
Translates to: RSHEEAAGQSFG*APGPTSGFLPI
Trigger: AATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGGACTGGCCAGCAGCCTCTTCATGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp GAAATAGCCTTCCTTTTCCCAATGCCTCAGATCCCATaGAGAGGCTGCTGGCCAGTCCTTTGGGTGGGCACC +
Preference number: 3 (lower is better)
Translates to: EIAFLFPMPQIP*RGCWPVLWVGT
Trigger: GGTGCCCACCCAAAGGACTGGCCAGCAGCCTCTTCATGGGATCTGAGGCATTGGGAAAAGGAAGGCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp TTGTGTGGGAGAACACAGCCAAGCTACAGTTTCCATTaGGCACCCAAACCCCACCGCAGAAGCAGTAGGCAT +
Preference number: 3 (lower is better)
Translates to: LCGRTQPSYSFH*APKPHRRSSRH
Trigger: ATGCCTACTGCTTCTGCGGTGGGGTTTGGGTGCGCAATGGAAACTGTAGCTTGGCTGTGTTCTCCCACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp ACATCATGTACCCTACCCTTTCCTCTTCCACCCCTTTaGAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: TSCTLPFPLPPL*KASTPGPRREE
Trigger: CTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGGAAAGGGTAGGGTACATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACTCCTGCACTCAAGGTaGAGGAACAGAGTCCACAGT +
Preference number: 3 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLLLHSR*RNRVHS
Trigger: ACTGTGGACTCTGTTCCTCAACCTTGAGTGCAGGAG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp GTGGTCCTGCACCCTCTGACTGAGAGGGGACAACTATaGTGGAGATTCGAAGTAACTTTGGCCAAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: VVLHPLTERGQL*WRFEVTLAKVS
Trigger: GCTGACTTTGGCCAAAGTTACTTCGAATCTCCACCATAGTTGTCCCCTCTCAGTCAGAGGGTGCAGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp TCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTaGGGCTGGTCCTGCTGCCCAGTGGAGACCAAGAGC +
Preference number: 3 (lower is better)
Translates to: SKITKREQNTSA*GWSCCPVETKS
Trigger: GCTCTTGGTCTCCACTGGGCAGCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCGCTATTGAAAGTCAATaGAGGGTGGAAGCAGAGGTT +
Preference number: 3 (lower is better)
Translates to: PLPPLCKASTPGPRREEIAIESQ*RVEAEV
Trigger: AACCTCTGCTTCCACCCTCAATTGACTTTCAATAGC...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp ACGGTGGATAGAATGTTTCAGTGGTCCTGCACCCTCTaGCTGAGAGGGGACAACTATGGTGGAGATTCGAAG +
Preference number: 3 (lower is better)
Translates to: TVDRMFQWSCTL*LRGDNYGGDSK
Trigger: CTTCGAATCTCCACCATAGTTGTCCCCTCTCAGTCAGAGGGTGCAGGACCACTGAAACATTCTATCCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp GCAAGAGCACCTCAATTGCAGGGGAAAGAATTGATGTaGCAGAAGGAGCGTTTGCTCCAGGTTCCCAAGACC +
Preference number: 3 (lower is better)
Translates to: ARAPQLQGKELM*QKERLLQVPKT
Trigger: GGTCTTGGGAACCTGGAGCAAACGCTCCTTCTGTCACATCAATTCTTTCCCCTGCAATTGAGGTGCTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp AGGAGCGTTTGCTCCAGGTTCCCAAGACCAGGCAACTaGCCTTCTCTAACAAGGATGGTGAAAACCAAGGAA +
Preference number: 3 (lower is better)
Translates to: RSVCSRFPRPGN*PSLTRMVKTKE
Trigger: TTCCTTGGTTTTCACCATCCTTGTTAGAGAAGGGCAGTTGCCTGGTCTTGGGAACCTGGAGCAAACGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp ATGGGAGAATGGCTAAGCCATCACTTCCTTTTCCTCTaGCTCCAGTCACAAAGCTCCGCTATGGCTCACACA +
Preference number: 3 (lower is better)
Translates to: MGEWLSHHFLFL*LQSQSSAMAHT
Trigger: TGTGTGAGCCATAGCGGAGCTTTGTGACTGGAGTCAGAGGAAAAGGAAGTGATGGCTTAGCCATTCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp AAATGCATTTTGGTGAAGTTCAGGGCCACTGAACACTaGAGACTTGTGCAGGGAGAATGTGGCTGCATGGGG +
Preference number: 3 (lower is better)
Translates to: KCILVKFRATEH*RLVQGECGCMG
Trigger: CCCCATGCAGCCACATTCTCCCTGCACAAGTCTTCAGTGTTCAGTGGCCCTGAACTTCACCAAAATGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp TGCTGCCCAGTGGAGACCAAGAGCCGCTGTGAGAACTaGAGCCCCAGCGAAAGAAGTTTCAAGCAAAATAAA +
Preference number: 3 (lower is better)
Translates to: CCPVETKSRCEN*SPSERSFKQNK
Trigger: TTTATTTTGCTTGAAACTTCTTTCGCTGGGGCTTCAGTTCTCACAGCGGCTCTTGGTCTCCACTGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp ATGCTATTAACATCTAAACATAGATGCTGTGGCTGCTaGCCTGCTAGCCTTTGTGGTGGTGGTGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: MLLTSKHRCCGC*PASLCGGGERE
Trigger: CTCCCTCTCACCACCACCACAAAGGCTAGCAGGCCAGCAGCCACAGCATCTATGTTTAGATGTTAATAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCTATATCCTCCCTTCCTaGTTAAAGAAGTTGTTTTGC +
Preference number: 3 (lower is better)
Translates to: PLPPLCKASTPGPRREEIYILPS*LKKLFC
Trigger: GCAAAACAACTTCTTTAACAAGGAAGGGAGGATATA...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp TGGATAGAATGTTTCAGTGGTCCTGCACCCTCTGACTaGGAGGGGACAACTATGGTGGAGATTCGAAGTAAC +
Preference number: 3 (lower is better)
Translates to: WIECFSGPAPSD*EGTTMVEIRSN
Trigger: GTTACTTCGAATCTCCACCATAGTTGTCCCCTCTCAGTCAGAGGGTGCAGGACCACTGAAACATTCTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp TGCACCAGCAACATTCACTCTACTGAGCAGAGCACGTaGTCCGCCAATCATATTAGTTGGAACATTGATGGC +
Preference number: 3 (lower is better)
Translates to: CTSNIHSTEQST*SANHISWNIDG
Trigger: GCCATCAATGTTCCAACTAATATGATTGGCGGAGCACGTGCTCTGCTCAGTAGAGTGAATGTTGCTGGTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCCTTGGGAGGAATATATaGTCTCTGGAGGACAAGGGC +
Preference number: 3 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCLGRNI*SLEDKG
Trigger: GCCCTTGTCCTCCAGAGACAATATATTCCTCCCAAG...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAATAAGCCAGATGGTGTaGTCACAAAGCAAATCAGAA +
Preference number: 3 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLISQMV*SQSKSE
Trigger: TTCTGATTTGCTTTGTGACAACACCATCTGGCTTAT...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATGGCAAGATGCCCATTTaGTCTGGTCCCTTTGATGCT +
Preference number: 3 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNGKMPI*SGPFDA
Trigger: AGCATCAAAGGGACCAGACAAAATGGGCATCTTGCC...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCAGATTCGAAGTAACTTaGGCCAAAGTCAGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCRFEVT*AKVSPA
Trigger: TGCTGGGCTGACTTTGGCCAAAGTTACTTCGAATCT...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp TGGTTCGTAAGCATAAGAATCATGGCCTTGGCCCAATaGCCTGTGACCCAGGCAATTAGTGGAGGAGAATTA +
Preference number: 3 (lower is better)
Translates to: WFVSIRIMALAQ*PVTQAISGGEL
Trigger: TAATTCTCCTCCACTAATTGCCTGGGTCACAGGTCATTGGGCCAAGGCCATGATTCTTATGCTTACGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp TTTATGCTATTAACATCTAAACATAGATGCTGTGGCTaGTGGCCTGCTAGCCTTTGTGGTGGTGGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: FMLLTSKHRCCG*WPASLCGGGER
Trigger: CCTCTCACCACCACCACAAAGGCTAGCAGGCCAGCAGCCACAGCATCTATGTTTAGATGTTAATAGCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp CAGCTGGGTTACTTAGTTTTCTCTTCCACCATGGTCTaGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTG +
Preference number: 3 (lower is better)
Translates to: QLGYLVFSSTMV*VAPLIVLRRKL
Trigger: CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAAAACTAAGTAACCCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTATAAACAAGCACAATaGACACTGGGCCACAAGAGG +
Preference number: 3 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNYKQAQ*TLGHKR
Trigger: CCTCTTGTGGCCCAGTGTCAATTGTGCTTGTTTATA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTGGCTTAAATGCATTTaGGTGAAGTTCAGGGCCACT +
Preference number: 3 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNWLKCI*VKFRAT
Trigger: AGTGGCCCTGAACTTCACCAAAATGCATTTAAGCCA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp TACAAGCTTTACCACCTTGGCTTAAATGCATTTTGGTaGAGTTCAGGGCCACTGAACACTGAAGACTTGTGC +
Preference number: 3 (lower is better)
Translates to: YKLYHLGLNAFW*SSGPLNTEDLC
Trigger: GCACAAGTCTTCAGTGTTCAGTGGCCCTGAACTTCACCAAAATGCATTTAAGCCAAGGTGGTAAAGCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp CAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTaGACAATTAACCTCAGCAACTACCCAAAGGACAGA +
Preference number: 3 (lower is better)
Translates to: QRRMLAEAHFST*TINLSNYPKDR
Trigger: TCTGTCCTTTGGGTAGTTGCTGAGGTTAATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp CTTCCAAAGAGTCAGACCTTTCCACTTTCTTCTCACTaGCATAACTTCAGTGAAAGTGGCCAAGTTTTGGCT +
Preference number: 3 (lower is better)
Translates to: LPKSQTFPLSSH*HNFSESGQVLA
Trigger: AGCCAAAACTTGGCCACTTTCACTGAAGTTATGTCAGTGAGAAGAAAGTGGAAAGGTCTGACTCTTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp CTTCTCTTTTCCTTCCATTATTTCTGCCAATGGGTATaGTGGATGGAAAGGAAAAAGTCCTGTGCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: LLFSFHYFCQWV*WMERKKSCAFW
Trigger: CCAGAAAGCACAGGACTTTTTCCTTTCCATCCAGCATACCCATTGGCAGAAATAATGGAAGGAAAAGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp ACCCTTTCCACATTCATCCGTCTTAAGCTAGTAAAGTaGAATACATCATGTACCCTACCCTTTCCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: TLSTFIRLKLVK*NTSCTLPFPLP
Trigger: TGGAAGAGGAAAGGGTAGGGTACATGATGTATTGCACTTTACTAGCTTAAGACGGATGAATGTGGAAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp ACTGCAACCTCTCTTACAAGTACATGGCATCAGATATaGCCTGGAACCAAATATAAAGGTGCAGAGAAAGGT +
Preference number: 3 (lower is better)
Translates to: TATSLTSTWHQI*PGTKYKGAEKG
Trigger: ACCTTTCTCTGCACCTTTATATTTGGTTCCAGGTCATATCTGATGCCATGTACTTGTAAGAGAGGTTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp TGTAACCTGTCAGCTTCAGTTTTTGTCAAGCAGGGTTaGATTACCATATCACCCATTGTATATATCCTCCCT +
Preference number: 3 (lower is better)
Translates to: CNLSASVFVKQG*ITISPIVYILP
Trigger: AGGGAGGATATATACAATGGGTGATATGGTAATCCAACCCTGCTTGACAAAAACTGAAGCTGACAGGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp GGATTTCTCCCTATTGCAATTCCTAGGCATTTTCAATaGAATTTCACCACCCTTTCCACATTCATCCGTCTT +
Preference number: 3 (lower is better)
Translates to: GFLPIAIPRHFQ*NFTTLSTFIRL
Trigger: AAGACGGATGAATGTGGAAAGGGTGGTGAAATTTCATTGAAAATGCCTAGGAATTGCAATAGGGAGAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp ACCTGCTCTTTAATGGCAATAGCCATTAACAACAACTaGAGTTTCCCACAGAGAAACAGGATGAACAAAAAC +
Preference number: 3 (lower is better)
Translates to: TCSLMAIAINNN*SFPQRNRMNKN
Trigger: GTTTTTGTTCATCCTGTTTCTCTGTGGGAAACTTCAGTTGTTGTTAATGGCTATTGCCATTAAAGAGCAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR GCA 72 bp TCAACCAGGATTGGAAGCCAATTAATACACATTACCTaGTTCCTGGCCAGATTAAATTGGGTCATATTAAAG +
Preference number: 3 (lower is better)
Translates to: STRIGSQLIHIT*FLARLNWVILK
Trigger: CTTTAATATGACCCAATTTAATCTGGCCAGGAAGCAGGTAATGTGTATTAATTGGCTTCCAATCCTGGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CCA 72 bp TTAATACACATTACCTGCTTCCTGGCCAGATTAAATTaGGTCATATTAAAGCTGGGTCAAAGGCTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: LIHITCFLARLN*VILKLGQRLFC
Trigger: ACAAAACAGCCTTTGACCCAGCTTTAATATGACCCAATTTAATCTGGCCAGGAAGCAGGTAATGTGTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR TCA 72 bp TTAACAACAACTGAAGTTTCCCACAGAGAAACAGGATaGACAAAAACAGTGACTCCTCGTGGATTTGTAATT +
Preference number: 3 (lower is better)
Translates to: LTTTEVSHRETG*TKTVTPRGFVI
Trigger: AATTACAAATCCACGAGGAGTCACTGTTTTTGTTCATCCTGTTTCTCTGTGGGAAACTTCAGTTGTTGTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGTTGACATTTCTCCACTaGGGAGGAATATATTGTCTC +
Preference number: 3 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKLTFLH*GGIYCL
Trigger: GAGACAATATATTCCTCCCAAGTGGAGAAATGTCAA...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR-3UTR CAA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGTTTTGTCTGGTCCCTTaGATGCTTTCTTTCCAATTT +
Preference number: 3 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKFCLVP*MLSFQF
Trigger: AAATTGGAAAGAAAGCATCAAAGGGACCAGACAAAA...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGCCTTGCCAGGAGCGGTaGCCGCCCCAGGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGPCQER*PPQARG
Trigger: TCCCCGAGCCTGGGGCGGCCACCGCTCCTGGCAAGG...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCAGCCTGTGGGGCCTCTaGTGTGGGCTTGAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEISLWGL*CGLEEN
Trigger: GTTCTCCTCAAGCCCACATCAGAGGCCCCACAGGCT...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACTTGGATGGGGGCCGTaGGTAGACCCTTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLLGWGP*VDPSQP
Trigger: GGGCTGGGAAGGGTCTACCCACGGCCCCCATCCAAG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCGCGGCGCACAAGGAGTaGGACGCACCGCGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVAAHKE*DAPRVD
Trigger: GTCCACCCGCGGTGCGTCCCACTCCTTGTGCGCCGC...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCAAGAGGGAGCCCCCGTaGCCTCCCTGGCTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVKREPP*PPWLLR
Trigger: GCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCAGTCATCTTCTGGGATaGGTCCTCAGTGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEISHLLG*VLSGAA
Trigger: GGCAGCCCCACTGAGGACCCATCCCAGAAGATGACT...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGCGGCCTCAGGGTGCCTaGGGCCCGGGTTCTGGATCG +
Preference number: 4 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLRPQGA*GPGSGS
Trigger: CGATCCAGAACCCGGGCCCCAGGCACCCTGAGGCCG...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCAGCTGCTCTCAGGGTaGCCCTCGGAGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCQLLSG*PSEAAC
Trigger: GCAGGCAGCCTCCGAGGGCCACCCTGAGAGCAGCTG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCCTGATCTGGAGGAGCTaGTGGCTGCTGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVLIWRS*WLLRQP
Trigger: GGGCTGCCGCAGCAGCCACCAGCTCCTCCAGATCAG...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAAGGAAGAAGAGGTGGTaGCTGGGGGCGATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLRKKRW*LGAIQC
Trigger: GCACTGGATCGCCCCCAGCCACCACCTCTTCTTCCT...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGGCCAGGAAGAAGAGGTaGTGGCTGGGGGCGATCCAG +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGARKKR*WLGAIQ
Trigger: CTGGATCGCCCCCAGCCACCACCTCTTCTTCCTGGC...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATAGGCCCGGCATCGCTTaGGCTGCTGCTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNRPGIA*AAAAAP
Trigger: GGGGGCGGCAGCAGCAGCCCAAGCGATGCCGGGCCT...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCCTGGTAGAAGCGCCTTaGGCAGGATGTGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEILVEAP*AGCGIL
Trigger: AAGAATCCCACATCCTGCTCAAGGCGCTTCTACCAG...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGGGAGGAGCTGGTGGCTaGTGCGGCAGCCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLGGAGG*CGSPLP
Trigger: TGGCAAGGGGCTGCCGCAGCAGCCACCAGCTCCTCC...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGATAGCGGCATTGCGCTaGCGCCGCAGCCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLIAALR*RRSPGA
Trigger: AGCGCCTGGGCTGCGGCGGCAGCGCAATGCCGCTAT...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATATGAACATAAATCTGCGGCATCGCTTGGGCTaGTGCTGCCGCCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SSHKAPLWLTHGNMNINLRHRLG*CCRPRL
Trigger: GAGGCGGGGGCGGCAGCAGCAGCCCAAGCGATGCCG...CAGATTTATGTTCATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCCTGGGGCCCGGGTTCTaGATCGCTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCLGPGF*IASRTL
Trigger: GAGCGTGCGCGAAGCGATCCAGAACCCGGGCCCCAG...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCCCGAAGCTGTTCCCCTaGACTCAGATGTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEIPKLFP*TQMFQC
Trigger: GCATTGGAACATCTGAGTCCAGGGGAACAGCTTCGG...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGTGCAGCTGCCACAAGTaGGAGCTCCGTAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGCSCHK*ELRSDS
Trigger: GCTGTCACTACGGAGCTCTCACTTGTGGCAGCTGCA...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTTAGCGGCCTCAGGGTaGCTGGGGCCCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNLAASG*LGPGFW
Trigger: CCAGAACCCGGGCCCCAGGCACCCTGAGGCCGCTAA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGCTTGATACGGGCGTGTaGATGGGTAGGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLLDTGV*MGRGRG
Trigger: CCCCCGCCCCCTACCCATCCACACGCCCGTATCAAG...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTACTTCAGCGGCTCTTTTaGAGAAGACCTTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLLQRLF*RRPCSC
Trigger: GCAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAG...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGAATCCAGGAGCTTGGTaGGCTGGTAGAAGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGNPGAW*AGRSAL
Trigger: CAAGGCGCTTCTACCAGCTCACCAAGCTCCTGGATT...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCACCATCCTCAGTGTGCTaGTGCCGCCGCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSPSSVC*CRRRRR
Trigger: CCGGCGGCGGCGGCGGCAGCAGCACACTGAGGATGG...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTGCTGCTGTGAAGGCTaGTGTTCCTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCCCCEG*CSSSRA
Trigger: GGCCCTGGAGGAGGAACAGCAGCCTTCACAGCAGCA...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGTTCAGTGCTTTTGCCTaGGCCTTCGTCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGFSAFA*AFVQGK
Trigger: CTTCCCCTGGACGAAGGCCCAGGCAAAAGCACTGAA...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCGGCAGCAAAGGAATCTaGTTGGTTGTTGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEIGSKGI*LVVVMS
Trigger: GGACATGACAACAACCAACCAGATTCCTTTGCTGCC...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp TACATCATGTACCCTACCCTTTCCTCTTCCACCCCTTaGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: YIMYPTLSSSTP*QGLNTRPKKGR
Trigger: TCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGGAAAGGGTAGGGTACATGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCATGGGTTCTCCAGCTTaGTACGGGCGTGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCMGSPA*YGRVDG
Trigger: CCCATCCACACGCCCGTATCAAGCTGGAGAACCCAT...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTATCCAGGAATACTGAATaGCCGCCATCTGGTCATCCA +
Preference number: 4 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLSRNTE*PPSGHP
Trigger: TGGATGACCAGATGGCGGTCATTCAGTATTCCTGGA...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCTTAGCAGGTCAAAAGTaGACTGATGCAGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEILAGQK*TDAALL
Trigger: CAAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAA...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCACTCAGATGTTCCAATaGTTCCACACCCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEITQMFQ*FHTQSH
Trigger: ATGGGATTGGGTGTGGAAGCATTGGAACATCTGAGT...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCCTCTGATGTGGGCTTaGGGAGAACCATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCPLMWA*GEPSSV
Trigger: CACTGAGGATGGTTCTCCTCAAGCCCACATCAGAGG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCTGCGATCGAGTTCCTTaGTGTAGTTCATTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLPPLCKASTPGPRREEICDRVP*CSSFEV
Trigger: AACTTCGAATGAACTACATCAAGGAACTCGATCGCA...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATATGAACATAAATCTGCCAGGGGAAGACCTTTaGATTCGGGCAGCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SSHKAPLWLTHGNMNINLPGEDL*IRAAAH
Trigger: GTGCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGG...CAGATTTATGTTCATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGACCACATGCACAAGCTaGCTCTCTCCAAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGTTCTS*LSPSSL
Trigger: CAATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGT...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCTCGATAGGTCTTGGATaGGGGCCGTGGGTAGACCCT +
Preference number: 4 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCSIGLG*GPWVDP
Trigger: AGGGTCTACCCACGGCCCCCATCCAAGACCTATCGA...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGGGCACACACCACTCCTaGCTCAATGGCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLGTHHS*LNGFQD
Trigger: GTCCTGGAAGCCATTGAGCCAGGAGTGGTGTGTGCC...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp CTGCGGATGAGAGTTGAAAGCACTACACGACTCTTCTaGAATCCCAGAGTTCGTGACTTTGGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRMRVESTTRLF*NPRVRDFGSWL
Trigger: CAGCCAGCTGCCAAAGTCACGAACTCTGGGATTCAAGAAGAGTCGTGTAGTGCTTTCAACTCTCATCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCAGCCATCCAAACTCTTaGGACAGGTGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCSHPNS*DRCLIL
Trigger: GAGGATGAGGCACCTGTCTCAAGAGTTTGGATGGCT...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCACGTGCTCCGCCAATCATATTAGTTGGAACATTGATGGCCAAAGAAAGCAAACTAGTCTCCTGCCTCTaGTGTAAACAGGCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: ARAPPIILVGTLMAKESKLVSCL*CKQAPG
Trigger: TCCCGGCGCCTGTTTACAGCAGAGGCAGGAGACTAG...TTTGCTTTCTTTGGCCATCAATGTTCCAACTAATATGATTGGCGGAGCACGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGTCCCAGAGTCATCCCTaGTTCATAACATTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGSQSHP*FITFPE
Trigger: CTCCGGAAATGTTATGAAGCAGGGATGACTCTGGGA...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCAGGATCTTGGGCACTTaGACAGAGATGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVRILGT*TEMISA
Trigger: GGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCCTAGGTAACTATCCTTaGAGGAAGAGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCLGNYP*RKREPP
Trigger: CGGGGGCTCCCTCTTCCTCCAAGGATAGTTACCTAG...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp GAGAGGGGACAACTATGGTGGAGATTCGAAGTAACTTaGGCCAAAGTCAGCCCAGCAATGGCAATAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERGQLWWRFEVT*AKVSPAMAIEE
Trigger: CTCCTCTATTGCCATTGCTGGGCTGACTTTGGCCAAAGTTACTTCGAATCTCCACCATAGTTGTCCCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGTGTTGTTGCTGCTGCTaGAGAAGTTGCATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLCCCCC*RSCMVP
Trigger: CGGCACCATGCAACTTCTTCAGCAGCAGCAACAACA...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTGGCGTAACCTCCCTTaGAAGAGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCWRNLP*KRNTQQ
Trigger: CTGCTGAGTATTCCTCTTTCAAGGGAGGTTACGCCA...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGGGAGCTGGTGGCTGCTaGGGCAGCCCCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKGAGGC*GSPLPG
Trigger: TCCTGGCAAGGGGCTGCCGCAGCAGCCACCAGCTCC...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATATGAACATAAATCTGTGTCGGCGGAGCAGCTaGTTAAGCCTGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSHKAPLWLTHGNMNINLCRRSS*LSLGKW
Trigger: CCACTTTCCCAGGCTTAAGCAGCTGCTCCGCCGACA...CAGATTTATGTTCATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTACCTGCTTCACTGCTaGCAGAGCACCCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNYLLHC*QSTPSS
Trigger: AGAGCTTGGGGTGCTCTGGCAGCAGTGAAGCAGGTA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCACCGCAGCCCAGGCGCTaGCGTAGTCCAATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSPQPRR*RSPMGS
Trigger: AGAACCCATTGGACTACGGCAGCGCCTGGGCTGCGG...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCGCAGGTCTTCTGGGGTaGAAAGTAATAGTCGATGGG +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCAGLLG*KVIVDG
Trigger: CCCATCGACTATTACTTTCCACCCCAGAAGACCTGC...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCGCAAAGGAATCTGGTTaGTTGTTGTCATGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVAKESG*LLSCPA
Trigger: TGCCGGACATGACAACAACCAACCAGATTCCTTTGC...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCATGCACAGGAATTCCTaGGGGGTTATTTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVMHRNS*GVIWSH
Trigger: ATGGCTCCAAATAACCCCCCAGGAATTCCTGTGCAT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp GGCTGTGGGGAGGTAATGGTTATCCATCTGCCCTCCTaGTCCTCTTTTCTCTCTACCCTATCAGTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GCGEVMVIHLPS*SSFLSTLSVKL
Trigger: AAGCTTTACTGATAGGGTAGAGAGAAAAGAGGACAAGGAGGGCAGATGGATAACCATTACCTCCCCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GCACGTGCTCCGCCAATCATATTAGTTGGAACATTGATGGCCAAAGAAAGCAAAGGCCTTCTTCAGCTGTaGAGAGAGTATGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARAPPIILVGTLMAKESKGLLQL*REYARK
Trigger: CTTCCTGGCATACTCTCTTCACAGCTGAAGAAGGCC...TTTGCTTTCTTTGGCCATCAATGTTCCAACTAATATGATTGGCGGAGCACGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCAAGGCCTTGGCCCACTTaGCCACATGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSRPWPT*PHAQAA
Trigger: GGCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCT...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATGAGATTACCTCCTGCTaGTGTTGGTGCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNEITSC*CWCCWC
Trigger: GCACCAACAGCACCAACAGCAGCAGGAGGTAATCTC...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCACGTGCTCCGCCAATCATATTAGTTGGAACATTGATGGCCAAAGAAAGCAAAATCTGGTCATCCACATaGAAGTTGCGGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARAPPIILVGTLMAKESKIWSST*KLRKPG
Trigger: GCCTGGCTTCCGCAACTTGCATGTGGATGACCAGAT...TTTGCTTTCTTTGGCCATCAATGTTCCAACTAATATGATTGGCGGAGCACGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGGAAAGTAATAGTCGATaGGTAAAACATGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGESNSR*VKHGPW
Trigger: CCAGGGACCATGTTTTACCCATCGACTATTACTTTC...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp TCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATATGAACATAAATCTGCCCATCCAGGAATACTaGATGACCGCCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSHKAPLWLTHGNMNINLPIQEY*MTAIWS
Trigger: TGACCAGATGGCGGTCATTCAGTATTCCTGGATGGG...CAGATTTATGTTCATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCGAAAACCAAGTCAGGTaGAAAGTAGAGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: DSKITKREQNTSAWGWSCENQVR*KVEHPG
Trigger: TCCAGGATGCTCTACTTTGCACCTGACTTGGTTTTC...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGCGTGGATGGGGCAGCTaGGTCATCCTGATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKRGWGS*VILIWR
Trigger: CCTCCAGATCAGGATGACTCAGCTGCCCCATCCACG...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCAGGTCCTCAGTGGGGCTaGCAGCATTGGAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSGPQWG*QHWSFL
Trigger: GAGAAAACTCCAATGCTGGCAGCCCCACTGAGGACC...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCGCTTCGCGCACGCTCTaGAACAGATTCTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVASRTL*NRFWNA
Trigger: AGCGTTCCAGAATCTGTTCCAGAGCGTGCGCGAAGC...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATCCGGAGACGACAAGATaGGCAATTTTTCCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNPETTR*AIFPPK
Trigger: TTTCGGAGGAAAAATTGCCCATCTTGTCGTCTCCGG...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCATTCTTTCTTTTGCATaGAATGATGCGATCGAGTTC +
Preference number: 4 (lower is better)
Translates to: LWVQSICSHTGQICPMRVILSFA*NDAIEF
Trigger: GAACTCGATCGCATCATTGCATGCAAAAGAAAGAAT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCGATACAGTCATCTTCTaGGATGGGTCCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVDTVIF*DGSSVG
Trigger: CCCCACTGAGGACCCATCCCAGAAGATGACTGTATC...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp CAGCTAAGAGAGCTCCTGTACATAAGCCAGATGGTGTaGTCACAAAGCAAATCAGAAACTGTCCCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QLRELLYISQMV*SQSKSETVPFC
Trigger: ACAAAACGGGACAGTTTCTGATTTGCTTTGTGACAACACCATCTGGCTTATGTACAGGAGCTCTCTTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGCATCCACATGCAAGTTaGGGAAGCCAGGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKHPHAS*GSQARP
Trigger: AGGCCTTGCCTGGCTTCCGCAACTTGCATGTGGATG...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCACCACACCCAATCCCATaGACACAGACACTGCTTTAC +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSPHPIP*TQTLLY
Trigger: GTAAAGCAGTGTCTGTGTCCATGGGATTGGGTGTGG...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TCCAGTCACAAAGCTCCGCTATGGCTCACACATGGAAATATGAACATAAATCTGGTAAAACATGGTCCCTaGTACTGTCCAAACGCATGT +
Preference number: 4 (lower is better)
Translates to: SSHKAPLWLTHGNMNINLVKHGP*YCPNAC
Trigger: ACATGCGTTTGGACAGTACCAGGGACCATGTTTTAC...CAGATTTATGTTCATATTTCCATGTGTGAGCCATAGCGGAGCTTTGTGACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCCTCATCCTCACACACTaGCTGTACATCCGAGACTTG +
Preference number: 4 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVLILTH*LYIRDL
Trigger: CAAGTCTCGGATGTACAGCCAGTGTGTGAGGATGAG...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp CTTGTCCTCTTTTCTCTCTACCCTATCAGTAAAGCTTaGGGGTCAACCTGCTCTTTAATGGCAATAGCCATT +
Preference number: 4 (lower is better)
Translates to: LVLFSLYPISKA*GSTCSLMAIAI
Trigger: AATGGCTATTGCCATTAAAGAGCAGGTTGACCCCAAAGCTTTACTGATAGGGTAGAGAGAAAAGAGGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCACATGGACACAGACACTaGTTTACACAACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSHGHRH*FTQLLG
Trigger: GCCAAGGAGTTGTGTAAAGCAGTGTCTGTGTCCATG...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTGGTACAATCGTTTCTaGTGGCACATAGATACTTCT +
Preference number: 4 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNWYNRF*WHIDTS
Trigger: AGAAGTATCTATGTGCCAGCAGAAACGATTGTACCA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCAGCTGAAGAGCAGCAGTaGTTTCATGCACAGGAATTC +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSAEEQQ*FHAQEF
Trigger: GAATTCCTGTGCATGAAAGCACTGCTGCTCTTCAGC...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGGCTGCCGTAGTCCAATaGGTTCTCCAGCTTGATACG +
Preference number: 4 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKAAVVQ*VLQLDT
Trigger: CGTATCAAGCTGGAGAACCCATTGGACTACGGCAGC...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCACCTGGCCCATATAATTaGCCTTCTTCAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSPGPYN*PSSAVK
Trigger: CTTCACAGCTGAAGAAGGCCAATTATATGGGCCAGG...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCATCCACGCTCACCATATaGGACTTGATTAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSSTLTI*DLISRS
Trigger: TGACCTGCTAATCAAGTCCCATATGGTGAGCGTGGA...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR TCA 90 bp GCAGAAGCAGTAGGCATAAAGCCATGTGTATGCTGTTTTTCTCTAATATTGTCAGTCCCATTTCACTTTTaGCACAATTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: AEAVGIKPCVCCFSLILSVPFHF*HNWDWD
Trigger: ATCCCAGTCCCAATTGTGTCAAAAGTGAAATGGGAC...TGACAATATTAGAGAAAAACAGCATACACATGGCTTTATGCCTACTGCTTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR GCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGGCTGTGAAGAGAGTATaGCAGGAAGAAGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKAVKRV*QEEEVV
Trigger: CACCACCTCTTCTTCCTGGCATACTCTCTTCACAGC...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp TCTCTAAATTTGCCATGGCATAAGGTGAGTAAACATTaGCTTGGTTGGCACACAGCACAGTGCTATAAACAA +
Preference number: 4 (lower is better)
Translates to: SLNLPWHKVSKH*LGWHTAQCYKQ
Trigger: TTGTTTATAGCACTGTGCTGTGTGCCAACCAAGCAAATGTTTACTCACCTTATGCCATGGCAAATTTAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGTTTCAGCCCATCCACTaGAATAATGCTGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKFQPIH*NNAEEQ
Trigger: CTGCTCTTCAGCATTATTCCAGTGGATGGGCTGAAA...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp ATTAATACACATTACCTGCTTCCTGGCCAGATTAAATaGGGTCATATTAAAGCTGGGTCAAAGGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: INTHYLLPGQIK*GHIKAGSKAVL
Trigger: CAAAACAGCCTTTGACCCAGCTTTAATATGACCCAATTTAATCTGGCCAGGAAGCAGGTAATGTGTATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CCA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCTCCGAAATTTATCAATaGTACAATCGTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVSEIYQ*YNRFCW
Trigger: CCAGCAGAAACGATTGTACCATTGATAAATTTCGGA...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
3UTR CAA 72 bp GTATGCTGTTTTTCTCTAATATTGTCACTTGGAAATTaGGAGTTTAGTTGGTGTTGCTTTAATTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: VCCFSLILSLGN*EFSWCCFNCTA
Trigger: AGCAGTGCAATTAAAGCAACACCAACTAAACTCCAAATTTCCAAGTGACAATATTAGAGAAAAACAGCATAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp GAGGCAGCTGCTCTCAGGGTGGCCCTCGGAGGCTGCCTGCTGCTGTaGAGGCTGCTGTTCCTCCTCCAGGGCCAGGTAGCCTGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: EAAALRVALGGCLLL*RLLFLLQGQVACGA
Trigger: GGCCCCACAGGCTACCTGGCCCTGGAGGAGGAACAGCAGCCTTCACAGCAGCAGGCAGCCTCCGAGGGCCACCCTGAGAGCAGCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp GCGGCATTGCGCTGCCGCCGCAGCCCAGGCGCTGCCGTAGTCCAATaGGTTCTCCAGCTTGATACGGGCGTGTGGATGGGTAGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: AALRCRRSPGAAVVQ*VLQLDTGVWMGRGR
Trigger: CCGCCCCCTACCCATCCACACGCCCGTATCAAGCTGGAGAACCCATTGGACTACGGCAGCGCCTGGGCTGCGGCGGCAGCGCAATGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp CGTCCAGGGGAAGACCTTTGCATTCGGGCAGCGGCGCACAAGGAGTaGGACGCACCGCGGGTGGACCTCCCAGGAGCGACGCGTACATGC +
Preference number: 5 (lower is better)
Translates to: RPGEDLCIRAAAHKE*DAPRVDLPGATRTC
Trigger: GCATGTACGCGTCGCTCCTGGGAGGTCCACCCGCGGTGCGTCCCACTCCTTGTGCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp GCCTGGGAAAGTGGGGCCCAGCAGGGACAACGTGGATGGGGCAGCTaGGTCATCCTGATCTGGAGGAGCTGGTGGCTGCTGCGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AWESGAQQGQRGWGS*VILIWRSWWLLRQP
Trigger: GGGCTGCCGCAGCAGCCACCAGCTCCTCCAGATCAGGATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGGGCCCCACTTTCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp TTTGCATTCGGGCAGCGGCGCACAAGGAGTGGGACGCACCGCGGGTaGACCTCCCAGGAGCGACGCGTACATGCAGTCTCCCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FAFGQRRTRSGTHRG*TSQERRVHAVSPKL
Trigger: CAGCTTCGGGGAGACTGCATGTACGCGTCGCTCCTGGGAGGTCCACCCGCGGTGCGTCCCACTCCTTGTGCGCCGCTGCCCGAATGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp TGCTGTAAACAGGCGCCGGGAGGTGCTATGTTAGCGGCCTCAGGGTaGCTGGGGCCCGGGTTCTGGATCGCTTCGCGCACGCTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: CCKQAPGGAMLAASG*LGPGFWIASRTLWN
Trigger: GTTCCAGAGCGTGCGCGAAGCGATCCAGAACCCGGGCCCCAGGCACCCTGAGGCCGCTAACATAGCACCTCCCGGCGCCTGTTTACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp GCCGAGTGTAGCCATAGGGGGCTACAGGCCCGGCATCGCTTGGGCTaGTGCTGCCGCCCCCGCCTCCTGGCCCATATAATTGGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: AECSHRGLQARHRLG*CCRPRLLAHIIGLL
Trigger: AAGAAGGCCAATTATATGGGCCAGGAGGCGGGGGCGGCAGCAGCAGCCCAAGCGATGCCGGGCCTGTAGCCCCCTATGGCTACACTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp GAGTGTAGCCATAGGGGGCTACAGGCCCGGCATCGCTTGGGCTGCTaGTGCCGCCCCCGCCTCCTGGCCCATATAATTGGCCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: ECSHRGLQARHRLGC*CRPRLLAHIIGLLQ
Trigger: CTGAAGAAGGCCAATTATATGGGCCAGGAGGCGGGGGCGGCAGCAGCAGCCCAAGCGATGCCGGGCCTGTAGCCCCCTATGGCTACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp AAGGCTGCTGTTCCTCCTCCAGGGCCAGGTAGCCTGTGGGGCCTCTaGTGTGGGCTTGAGGAGAACCATCCTCAGTGTGCTGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: KAAVPPPGPGSLWGL*CGLEENHPQCAAAA
Trigger: GGCGGCAGCAGCACACTGAGGATGGTTCTCCTCAAGCCCACATCAGAGGCCCCACAGGCTACCTGGCCCTGGAGGAGGAACAGCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp TGGAGGAAGAGGGAGCCCCCGTGGCCTCCCTGGCTCTTGCGCTGCTaGCTTCGGAGATTACCTCCTGCTGCTGTTGGTGCTGTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: WRKREPPWPPWLLRC*LRRLPPAAVGAVGA
Trigger: AGCACCAACAGCACCAACAGCAGCAGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp CCTTGGAGGAAGAGGGAGCCCCCGTGGCCTCCCTGGCTCTTGCGCTaGTGCCTTCGGAGATTACCTCCTGCTGCTGTTGGTGCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: PWRKREPPWPPWLLR*CLRRLPPAAVGAVG
Trigger: ACCAACAGCACCAACAGCAGCAGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp GAGTGGGACGCACCGCGGGTGGACCTCCCAGGAGCGACGCGTACATaGAGTCTCCCCGAAGCTGTTCCCCTGGACTCAGATGTTCCAATG +
Preference number: 5 (lower is better)
Translates to: EWDAPRVDLPGATRT*SLPEAVPLDSDVPM
Trigger: CATTGGAACATCTGAGTCCAGGGGAACAGCTTCGGGGAGACTGCATGTACGCGTCGCTCCTGGGAGGTCCACCCGCGGTGCGTCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp TCTCTTCAGTGCTTTTGCCTGGGCCTTCGTCCAGGGGAAGACCTTTaGATTCGGGCAGCGGCGCACAAGGAGTGGGACGCACCGCGGGTG +
Preference number: 5 (lower is better)
Translates to: SLQCFCLGLRPGEDL*IRAAAHKEWDAPRV
Trigger: CACCCGCGGTGCGTCCCACTCCTTGTGCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGGACGAAGGCCCAGGCAAAAGCACTGAAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp GGAGGTGCTATGTTAGCGGCCTCAGGGTGCCTGGGGCCCGGGTTCTaGATCGCTTCGCGCACGCTCTGGAACAGATTCTGGAACGCTCCT +
Preference number: 5 (lower is better)
Translates to: GGAMLAASGCLGPGF*IASRTLWNRFWNAP
Trigger: AGGAGCGTTCCAGAATCTGTTCCAGAGCGTGCGCGAAGCGATCCAGAACCCGGGCCCCAGGCACCCTGAGGCCGCTAACATAGCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTATGCTGCGGCAGCCCCTaGCCAGGAGCGGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLCCGSP*PGAVAA
Trigger: GGCGGCCACCGCTCCTGGCAAGGGGCTGCCGCAGCA...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp CCTCTTCCACCCCTTTGCAAGGCCTCAACACCAGGCCCAAGAAGGGAAGAGATCGTCCCCATAGCGGCATaGCGCTGCCGCCGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: PLPPLCKASTPGPRREEIVPIAA*RCRRSP
Trigger: TGGGCTGCGGCGGCAGCGCAATGCCGCTATGGGGAC...GATCTCTTCCCTTCTTGGGCCTGGTGTTGAGGCCTTGCAAAGGGGTGGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp AGAGAGTATGCCAGGAAGAAGAGGTGGTGGCTGGGGGCGATCCAGTaGTGGGCCCGGCTACACTCCCTCCATGTAGACTACCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: REYARKKRWWLGAIQ*WARLHSLHVDYPSP
Trigger: GGGACTTGGGTAGTCTACATGGAGGGAGTGTAGCCGGGCCCAGCACTGGATCGCCCCCAGCCACCACCTCTTCTTCCTGGCATACTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp CGCGCACGCTCTGGAACAGATTCTGGAACGCTCCTCGATAGGTCTTaGATGGGGGCCGTGGGTAGACCCTTCCCAGCCCTAACTGCACCT +
Preference number: 5 (lower is better)
Translates to: RARSGTDSGTLLDRS*MGAVGRPFPALTAP
Trigger: AGGTGCAGTTAGGGCTGGGAAGGGTCTACCCACGGCCCCCATCCAAGACCTATCGAGGAGCGTTCCAGAATCTGTTCCAGAGCGTGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp AGCAGCTGCTTAAGCCTGGGAAAGTGGGGCCCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCATCCTGATCTGGAGGAGCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SSCLSLGKWGPAGTT*MGQLSHPDLEELVA
Trigger: AGCCACCAGCTCCTCCAGATCAGGATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGGGCCCCACTTTCCCAGGCTTAAGCAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp GAGTATGCCAGGAAGAAGAGGTGGTGGCTGGGGGCGATCCAGTGCTaGGCCCGGCTACACTCCCTCCATGTAGACTACCCAAGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: EYARKKRWWLGAIQC*ARLHSLHVDYPSPH
Trigger: ATGGGGACTTGGGTAGTCTACATGGAGGGAGTGTAGCCGGGCCCAGCACTGGATCGCCCCCAGCCACCACCTCTTCTTCCTGGCATACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp CTAGGTAACTATCCTTGGAGGAAGAGGGAGCCCCCGTGGCCTCCCTaGCTCTTGCGCTGCTGCCTTCGGAGATTACCTCCTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LGNYPWRKREPPWPP*LLRCCLRRLPPAAV
Trigger: AACAGCAGCAGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCAAGGATAGTTACCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp AATTGCCCCCTAGGTAACTATCCTTGGAGGAAGAGGGAGCCCCCGTaGCCTCCCTGGCTCTTGCGCTGCTGCCTTCGGAGATTACCTCCT +
Preference number: 5 (lower is better)
Translates to: NCPLGNYPWRKREPP*PPWLLRCCLRRLPP
Trigger: AGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCAAGGATAGTTACCTAGGGGGCAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp TGGCACTGTCAGATATGGTTGAATTGCCCCCTAGGTAACTATCCTTaGAGGAAGAGGGAGCCCCCGTGGCCTCCCTGGCTCTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: WHCQIWLNCPLGNYP*RKREPPWPPWLLRC
Trigger: GCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCAAGGATAGTTACCTAGGGGGCAATTCAACCATATCTGACAGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCCAGGCCCGGCATCGCTaGGGCTGCTGCTGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCQARHR*GCCCRP
Trigger: GGGGCGGCAGCAGCAGCCCAAGCGATGCCGGGCCTG...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp CCTCCTGGCCCATATAATTGGCCTTCTTCAGCTGTGAAGAGAGTATaGCAGGAAGAAGAGGTGGTGGCTGGGGGCGATCCAGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PPGPYNWPSSAVKRV*QEEEVVAGGDPVLG
Trigger: GCCCAGCACTGGATCGCCCCCAGCCACCACCTCTTCTTCCTGGCATACTCTCTTCACAGCTGAAGAAGGCCAATTATATGGGCCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp TCCCAGGAGCGACGCGTACATGCAGTCTCCCCGAAGCTGTTCCCCTaGACTCAGATGTTCCAATGCTTCCACACCCAATCCCATGGACAC +
Preference number: 5 (lower is better)
Translates to: SQERRVHAVSPKLFP*TQMFQCFHTQSHGH
Trigger: GTGTCCATGGGATTGGGTGTGGAAGCATTGGAACATCTGAGTCCAGGGGAACAGCTTCGGGGAGACTGCATGTACGCGTCGCTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp GAGAGGACGGGATCTCAAGTGTCCCAGAGCTACCTGCTTCACTGCTaGCAGAGCACCCCAAGCTCTCACCTTCCAATCCTTTGGCGTAAC +
Preference number: 5 (lower is better)
Translates to: ERTGSQVSQSYLLHC*QSTPSSHLPILWRN
Trigger: GTTACGCCAAAGGATTGGAAGGTGAGAGCTTGGGGTGCTCTGGCAGCAGTGAAGCAGGTAGCTCTGGGACACTTGAGATCCCGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp TCCCTTGAAAGAGGAATACTCAGCAGTCTCTTCAGTGCTTTTGCCTaGGCCTTCGTCCAGGGGAAGACCTTTGCATTCGGGCAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: SLERGILSSLFSAFA*AFVQGKTFAFGQRR
Trigger: GCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGGACGAAGGCCCAGGCAAAAGCACTGAAGAGACTGCTGAGTATTCCTCTTTCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp CGGAAGCCAGGCAAGGCCTTGGCCCACTTGACCACATGCACAAGCTaGCTCTCTCCAAGCTCATTGAGGCTAGATAACAAGGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RKPGKALAHLTTCTS*LSPSSLRLDNKAAK
Trigger: CTTTGCTGCCTTGTTATCTAGCCTCAATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp TGCAAGTTGCGGAAGCCAGGCAAGGCCTTGGCCCACTTGACCACATaGACAAGCTGCCTCTCTCCAAGCTCATTGAGGCTAGATAACAAG +
Preference number: 5 (lower is better)
Translates to: CKLRKPGKALAHLTT*TSCLSPSSLRLDNK
Trigger: CTTGTTATCTAGCCTCAATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCGCAACTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAAATGGGTTCTCCAGCTaGATACGGGCGTGTGGATGG +
Preference number: 5 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLNGFSS*IRACGW
Trigger: CCATCCACACGCCCGTATCAAGCTGGAGAACCCATT...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp AGGAGCCACAATACGCAGCAGATTCAAAATGTGCCATGGGAGGGTGAAAGAGGGAAGGCCTTGGCCCACTaGACCACATGCACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSHNTQQIQNVPWEGERGKALAH*TTCTSC
Trigger: GCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCTT...CCCTCTTTCACCCTCCCATGGCACATTTTGAATCTGCTGCGTATTGTGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAGCTGGTAGAAGCGCCTaGAGCAGGATGTGGGATTCT +
Preference number: 5 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLAGRSA*SRMWDS
Trigger: AGAATCCCACATCCTGCTCAAGGCGCTTCTACCAGC...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp AGAGTGTGGACAGAGAAGGATGTTAGCAGAAGCACATTTCTCAACCTGGACAATTGGCCTCCCTGGCTCTaGCGCTGCTGCCTTCGGAGA +
Preference number: 5 (lower is better)
Translates to: RVWTEKDVSRSTFLNLDNWPPWL*RCCLRR
Trigger: TCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCA...ATTGTCCAGGTTGAGAAATGTGCTTCTGCTAACATCCTTCTCTGTCCACACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TCATGCAGGGATAGCAAGTCAGTTGTCTTCAGAAAACCTTCTGAAGTCTGGTGCTCCAGGGGAAGACCTTaGCATTCGGGCAGCGGCGCA +
Preference number: 5 (lower is better)
Translates to: SCRDSKSVVFRKPSEVWCSRGRP*HSGSGA
Trigger: TGCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGGA...GCACCAGACTTCAGAAGGTTTTCTGAAGACAACTGACTTGCTATCCCTGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp AGCACCCCAAGCTCTCACCTTCCAATCCTTTGGCGTAACCTCCCTTaGAAGAGGAATACTCAGCAGTCTCTTCAGTGCTTTTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: STPSSHLPILWRNLP*KRNTQQSLQCFCLG
Trigger: GCCCAGGCAAAAGCACTGAAGAGACTGCTGAGTATTCCTCTTTCAAGGGAGGTTACGCCAAAGGATTGGAAGGTGAGAGCTTGGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp ACACTGCTTTACACAACTCCTTGGCACTGTCAGATATGGTTGAATTaGCCCCTAGGTAACTATCCTTGGAGGAAGAGGGAGCCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: TLLYTTPWHCQIWLN*PLGNYPWRKREPPW
Trigger: CCACGGGGGCTCCCTCTTCCTCCAAGGATAGTTACCTAGGGGGCAATTCAACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 90 bp CATGCAGTCTCCCCGAAGCTGTTCCCCTGGACTCAGATGTTCCAATaGTTCCACACCCAATCCCATGGACACAGACACTGCTTTACACAA +
Preference number: 5 (lower is better)
Translates to: HAVSPKLFPWTQMFQ*FHTQSHGHRHCFTQ
Trigger: TTGTGTAAAGCAGTGTCTGTGTCCATGGGATTGGGTGTGGAAGCATTGGAACATCTGAGTCCAGGGGAACAGCTTCGGGGAGACTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCTGCTGCTGAAGAAGTaGCATGGTGCCGGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: DSKITKREQNTSAWGWSCLLLKK*HGAGLV
Trigger: AACGAGGCCGGCACCATGCAACTTCTTCAGCAGCAG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGAAGCCAGGCAAGGCCTaGGCCCACTTGACCACATGC +
Preference number: 5 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLKPGKA*AHLTTC
Trigger: GCATGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTT...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp AGGCTGCACAGAATCCAGGAGCTTGGTGAGCTGGTAGAAGCGCCTTaGGCAGGATGTGGGATTCTTTCTTTTGCATGCAATGATGCGATC +
Preference number: 5 (lower is better)
Translates to: RLHRIQELGELVEAP*AGCGILSFACNDAI
Trigger: GATCGCATCATTGCATGCAAAAGAAAGAATCCCACATCCTGCTCAAGGCGCTTCTACCAGCTCACCAAGCTCCTGGATTCTGTGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp CCAAGCTCATTGAGGCTAGATAACAAGGCAGCAAAGGAATCTGGTTaGTTGTTGTCATGTCCGGCACACACCACTCCTGGCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: PSSLRLDNKAAKESG*LLSCPAHTTPGSMA
Trigger: AGCCATTGAGCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCAGATTCCTTTGCTGCCTTGTTATCTAGCCTCAATGAGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCGCCTCTGATGTGGGCTaGAGGAGAACCATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: DSKITKREQNTSAWGWSCASDVG*RRTILS
Trigger: ACTGAGGATGGTTCTCCTCAAGCCCACATCAGAGGC...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCGAATCTGGTTGGTTGTaGTCATGTCCGGCACACACC +
Preference number: 5 (lower is better)
Translates to: LWVQSICSHTGQICPMRVESGWL*SCPAHT
Trigger: GGTGTGTGCCGGACATGACAACAACCAACCAGATTC...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp CAGGACGTTAAGAAAGATAGGCTGACATTCATAGCCTTCAATGTGTaGTACAGTCATCTTCTGGGATGGGTCCTCAGTGGGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: QDVKKDRLTFIAFNV*YSHLLGWVLSGAAS
Trigger: GCTGGCAGCCCCACTGAGGACCCATCCCAGAAGATGACTGTATCACACATTGAAGGCTATGAATGTCAGCCTATCTTTCTTAACGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp CCTTTGGGTGGGCACCTGGCCCCACATCTGGATTTCTCCCTATTGCAATTCCTAGCTTTACACAACTCCTaGGCACTGTCAGATATGGTT +
Preference number: 5 (lower is better)
Translates to: PLGGHLAPHLDFSLLQFLALHNS*ALSDMV
Trigger: AACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGC...TAGGAATTGCAATAGGGAGAAATCCAGATGTGGGGCCAGGTGCCCACCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCAAGGAATCTGGTTGGTaGTTGTCATGTCCGGCACAC +
Preference number: 5 (lower is better)
Translates to: LWVQSICSHTGQICPMRVKESGW*LSCPAH
Trigger: GTGTGCCGGACATGACAACAACCAACCAGATTCCTT...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCGAGCCATCCAAACTCTaGAGACAGGTGCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: DSKITKREQNTSAWGWSCEPSKL*RQVPHP
Trigger: AGGATGAGGCACCTGTCTCAAGAGTTTGGATGGCTC...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TTATGGGTGCAGTCTATTTGTAGCCACACCGGCCAGATCTGTCCAATGAGAGTCTTCCCAGAAAGGATCTaGGGCACTTGCACAGAGATG +
Preference number: 5 (lower is better)
Translates to: LWVQSICSHTGQICPMRVFPERI*GTCTEM
Trigger: CATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGGAA...GACTCTCATTGGACAGATCTGGCCGGTGTGGCTACAAATAGACTGCACCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp TCCACGCTCACCATATGGGACTTGATTAGCAGGTCAAAAGTGAACTaGTGCAGCTCTCTTGCAATAGGCTGCACAGAATCCAGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: STLTIWDLISRSKVN*CSSLAIGCTESRSL
Trigger: CAAGCTCCTGGATTCTGTGCAGCCTATTGCAAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAATCAAGTCCCATATGGTGAGCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp TGGACACAGACACTGCTTTACACAACTCCTTGGCACTGTCAGATATaGTTGAATTGCCCCCTAGGTAACTATCCTTGGAGGAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: WTQTLLYTTPWHCQI*LNCPLGNYPWRKRE
Trigger: CTCCCTCTTCCTCCAAGGATAGTTACCTAGGGGGCAATTCAACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGCAGTGTCTGTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp CCACACCCAATCCCATGGACACAGACACTGCTTTACACAACTCCTTaGCACTGTCAGATATGGTTGAATTGCCCCCTAGGTAACTATCCT +
Preference number: 5 (lower is better)
Translates to: PHPIPWTQTLLYTTP*HCQIWLNCPLGNYP
Trigger: AGGATAGTTACCTAGGGGGCAATTCAACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGCAGTGTCTGTGTCCATGGGATTGGGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp AAAGGAATCTGGTTGGTTGTTGTCATGTCCGGCACACACCACTCCTaGCTCAATGGCTTCCAGGACGTTAAGAAAGATAGGCTGACATTC +
Preference number: 5 (lower is better)
Translates to: KGIWLVVVMSGTHHS*LNGFQDVKKDRLTF
Trigger: GAATGTCAGCCTATCTTTCTTAACGTCCTGGAAGCCATTGAGCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCAGATTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 90 bp CATAAGGTCCGGAGTAGTTCTCCATCCAAGGTCCCATTTCACTTTTaGCACAATTGGGACTGGGATAGGGTACTCTGTTCACAACTCCAC +
Preference number: 5 (lower is better)
Translates to: HKVRSSSPSKVPFHF*HNWDWDRVLCSQLH
Trigger: GTGGAGTTGTGAACAGAGTACCCTATCCCAGTCCCAATTGTGTCAAAAGTGAAATGGGACCTTGGATGGAGAACTACTCCGGACCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGAGTCACTCTCCTGGCTaGTCAGCCCCTGAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKSHSPG*SAPEGA
Trigger: GGCCCCCTCAGGGGCTGACAAGCCAGGAGAGTGACT...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCTCTCTCCAAGCTCATaGAGGCTAGATAACAAGGCA +
Preference number: 5 (lower is better)
Translates to: DSKITKREQNTSAWGWSCLSPSS*RLDNKA
Trigger: TGCCTTGTTATCTAGCCTCAATGAGCTTGGAGAGAG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCTGCATGCGGTACTCATaGAAAACCAAGTCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: DSKITKREQNTSAWGWSCCMRYS*KTKSGA
Trigger: TGCACCTGACTTGGTTTTCAATGAGTACCGCATGCA...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TTCTCTTCCACCATGGTCTGGGTAGCCCCTTTAATTGTTCTGAGGAGGAAATTGGGTCCCATTTCACTTTaGACACAATTGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: FSSTMVWVAPLIVLRRKLGPISL*TQLGLG
Trigger: TCCCAGTCCCAATTGTGTCAAAAGTGAAATGGGACC...CAATTTCCTCCTCAGAACAATTAAAGGGGCTACCCAGACCATGGTGGAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp GATTCCAAGATTACAAAAAGAGAACAGAACACTAGCGCTTGGGGCTGGTCCTGCCTCACCATATGGGACTaGATTAGCAGGTCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: DSKITKREQNTSAWGWSCLTIWD*ISRSKV
Trigger: CACTTTTGACCTGCTAATCAAGTCCCATATGGTGAG...GCAGGACCAGCCCCAAGCGCTAGTGTTCTGTTCTCTTTTTGTAATCTTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCAGCAAAGGAATCTGGTaGGTTGTTGTCATGTCCGGC +
Preference number: 5 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVSKGIW*VVVMSG
Trigger: GCCGGACATGACAACAACCAACCAGATTCCTTTGCT...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TGGCTCACACATGGAAATATGAACATAAATCTGAATAGAGCCTTCCAAAGAGTCCTGTACATCCGAGACTaGTGCATGCGGTACTCATTG +
Preference number: 5 (lower is better)
Translates to: WLTHGNMNINLNRAFQRVLYIRD*CMRYSL
Trigger: CAATGAGTACCGCATGCACAAGTCTCGGATGTACAG...GACTCTTTGGAAGGCTCTATTCAGATTTATGTTCATATTTCCATGTGTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 90 bp TCCGGAGACGACAAGATGGGCAATTTTTCCTCCGAAATTTATCAATaGTACAATCGTTTCTGCTGGCACATAGATACTTCTGTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SGDDKMGNFSSEIYQ*YNRFCWHIDTSVSL
Trigger: AAGGGAAACAGAAGTATCTATGTGCCAGCAGAAACGATTGTACCATTGATAAATTTCGGAGGAAAAATTGCCCATCTTGTCGTCTCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS-3UTR CAA 90 bp TCTAATCCTTTAAATGTACCCCTTCTTATCAAGGGCTTCACATCTTCAAATAAGCCTTCAGCGGCTCTTTaGAAGAAGACCTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SNPLNVPLLIKGFTSSNKPSAAL*KKTLQL
Trigger: CAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAGG...CTTATTTGAAGATGTGAAGCCCTTGATAAGAAGGGGTACATTTAAAGGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp CAGGCGCCGGGAGGTGCTATGTTAGCGGCCTCAGGGTaGCTGGGGCCCGGGTTCTGGATCGCTTCGCGCACG +
Preference number: 6 (lower is better)
Translates to: QAPGGAMLAASG*LGPGFWIASRT
Trigger: CGTGCGCGAAGCGATCCAGAACCCGGGCCCCAGGCACCCTGAGGCCGCTAACATAGCACCTCCCGGCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp GGGCAGCGGCGCACAAGGAGTGGGACGCACCGCGGGTaGACCTCCCAGGAGCGACGCGTACATGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: GQRRTRSGTHRG*TSQERRVHAVS
Trigger: GGAGACTGCATGTACGCGTCGCTCCTGGGAGGTCCACCCGCGGTGCGTCCCACTCCTTGTGCGCCGCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp TGCCGCCGCCGCCGCCGGGGGCTAGTCTCCTGCCTCTaGTGTAAACAGGCGCCGGGAGGTGCTATGTTAGCG +
Preference number: 6 (lower is better)
Translates to: CRRRRRGLVSCL*CKQAPGGAMLA
Trigger: CGCTAACATAGCACCTCCCGGCGCCTGTTTACAGCAGAGGCAGGAGACTAGCCCCCGGCGGCGGCGGCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp AGGCAGCTGCTCTCAGGGTGGCCCTCGGAGGCTGCCTaGTGCTGTGAAGGCTGCTGTTCCTCCTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RQLLSGWPSEAA*CCEGCCSSSRA
Trigger: GGCCCTGGAGGAGGAACAGCAGCCTTCACAGCAGCAGGCAGCCTCCGAGGGCCACCCTGAGAGCAGCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp CATAGGGGGCTACAGGCCCGGCATCGCTTGGGCTGCTaGTGCCGCCCCCGCCTCCTGGCCCATATAATTGGC +
Preference number: 6 (lower is better)
Translates to: HRGLQARHRLGC*CRPRLLAHIIG
Trigger: GCCAATTATATGGGCCAGGAGGCGGGGGCGGCAGCAGCAGCCCAAGCGATGCCGGGCCTGTAGCCCCCTATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp GAAGACCTTTGCATTCGGGCAGCGGCGCACAAGGAGTaGGACGCACCGCGGGTGGACCTCCCAGGAGCGACG +
Preference number: 6 (lower is better)
Translates to: EDLCIRAAAHKE*DAPRVDLPGAT
Trigger: CGTCGCTCCTGGGAGGTCCACCCGCGGTGCGTCCCACTCCTTGTGCGCCGCTGCCCGAATGCAAAGGTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp AGCCATAGGGGGCTACAGGCCCGGCATCGCTTGGGCTaGTGCTGCCGCCCCCGCCTCCTGGCCCATATAATT +
Preference number: 6 (lower is better)
Translates to: SHRGLQARHRLG*CCRPRLLAHII
Trigger: AATTATATGGGCCAGGAGGCGGGGGCGGCAGCAGCAGCCCAAGCGATGCCGGGCCTGTAGCCCCCTATGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp CGCTGCCGCCGCAGCCCAGGCGCTGCCGTAGTCCAATaGGTTCTCCAGCTTGATACGGGCGTGTGGATGGGT +
Preference number: 6 (lower is better)
Translates to: RCRRSPGAAVVQ*VLQLDTGVWMG
Trigger: ACCCATCCACACGCCCGTATCAAGCTGGAGAACCCATTGGACTACGGCAGCGCCTGGGCTGCGGCGGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp AGGGAGCCCCCGTGGCCTCCCTGGCTCTTGCGCTGCTaGCTTCGGAGATTACCTCCTGCTGCTGTTGGTGCT +
Preference number: 6 (lower is better)
Translates to: REPPWPPWLLRC*LRRLPPAAVGA
Trigger: AGCACCAACAGCAGCAGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp GCACCGCGGGTGGACCTCCCAGGAGCGACGCGTACATaGAGTCTCCCCGAAGCTGTTCCCCTGGACTCAGAT +
Preference number: 6 (lower is better)
Translates to: APRVDLPGATRT*SLPEAVPLDSD
Trigger: ATCTGAGTCCAGGGGAACAGCTTCGGGGAGACTGCATGTACGCGTCGCTCCTGGGAGGTCCACCCGCGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp AAGAGGGAGCCCCCGTGGCCTCCCTGGCTCTTGCGCTaGTGCCTTCGGAGATTACCTCCTGCTGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: KREPPWPPWLLR*CLRRLPPAAVG
Trigger: ACCAACAGCAGCAGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp GCCAGGAAGAAGAGGTGGTGGCTGGGGGCGATCCAGTaGTGGGCCCGGCTACACTCCCTCCATGTAGACTAC +
Preference number: 6 (lower is better)
Translates to: ARKKRWWLGAIQ*WARLHSLHVDY
Trigger: GTAGTCTACATGGAGGGAGTGTAGCCGGGCCCAGCACTGGATCGCCCCCAGCCACCACCTCTTCTTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp ATGTTAGCGGCCTCAGGGTGCCTGGGGCCCGGGTTCTaGATCGCTTCGCGCACGCTCTGGAACAGATTCTGG +
Preference number: 6 (lower is better)
Translates to: MLAASGCLGPGF*IASRTLWNRFW
Trigger: CCAGAATCTGTTCCAGAGCGTGCGCGAAGCGATCCAGAACCCGGGCCCCAGGCACCCTGAGGCCGCTAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 90 bp GTCTCTTCAGTGCTTTTGCCTGGGCCTTCGTCCAGGGGAAGACCTTaGCATTCGGGCAGCGGCGCACAAGGAGTGGGACGCACCGCGGGT +
Preference number: 6 (lower is better)
Translates to: VSSVLLPGPSSRGRP*HSGSGAQGVGRTAG
Trigger: ACCCGCGGTGCGTCCCACTCCTTGTGCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGGACGAAGGCCCAGGCAAAAGCACTGAAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp TGCTTTTGCCTGGGCCTTCGTCCAGGGGAAGACCTTTaGATTCGGGCAGCGGCGCACAAGGAGTGGGACGCA +
Preference number: 6 (lower is better)
Translates to: CFCLGLRPGEDL*IRAAAHKEWDA
Trigger: TGCGTCCCACTCCTTGTGCGCCGCTGCCCGAATGCAAAGGTCTTCCCCTGGACGAAGGCCCAGGCAAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TATCCTTGGAGGAAGAGGGAGCCCCCGTGGCCTCCCTaGCTCTTGCGCTGCTGCCTTCGGAGATTACCTCCT +
Preference number: 6 (lower is better)
Translates to: YPWRKREPPWPP*LLRCCLRRLPP
Trigger: AGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCAAGGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp CTAGGTAACTATCCTTGGAGGAAGAGGGAGCCCCCGTaGCCTCCCTGGCTCTTGCGCTGCTGCCTTCGGAGA +
Preference number: 6 (lower is better)
Translates to: LGNYPWRKREPP*PPWLLRCCLRR
Trigger: TCTCCGAAGGCAGCAGCGCAAGAGCCAGGGAGGCCACGGGGGCTCCCTCTTCCTCCAAGGATAGTTACCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp AGGAAGAAGAGGTGGTGGCTGGGGGCGATCCAGTGCTaGGCCCGGCTACACTCCCTCCATGTAGACTACCCA +
Preference number: 6 (lower is better)
Translates to: RKKRWWLGAIQC*ARLHSLHVDYP
Trigger: TGGGTAGTCTACATGGAGGGAGTGTAGCCGGGCCCAGCACTGGATCGCCCCCAGCCACCACCTCTTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 72 bp ACCACACTTCGGAGGCAGAGTAGTCACTCTCCTGGCTaGTCAGCCCCTGAGGGGGCCGAGTGTAGCCATAGG +
Preference number: 6 (lower is better)
Translates to: TTLRRQSSHSPG*SAPEGAECSHR
Trigger: CCTATGGCTACACTCGGCCCCCTCAGGGGCTGACAAGCCAGGAGAGTGACTACTCTGCCTCCGAAGTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp CTGGCTCTTGCGCTGCTGCCTTCGGAGATTACCTCCTaGTGCTGTTGGTGCTGTTGGTGCTGCTGTTGGTGC +
Preference number: 6 (lower is better)
Translates to: LALALLPSEITS*CCWCCWCCCWC
Trigger: GCACCAACAGCAGCACCAACAGCACCAACAGCAGCAGGAGGTAATCTCCGAAGGCAGCAGCGCAAGAGCCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp CAGAGAGGACGGGATCTCAAGTGTCCCAGAGCTACCTaGTTCACTGCTGCCAGAGCACCCCAAGCTCTCACC +
Preference number: 6 (lower is better)
Translates to: QRGRDLKCPRAT*FTAARAPQALT
Trigger: GGTGAGAGCTTGGGGTGCTCTGGCAGCAGTGAAGCAGGTAGCTCTGGGACACTTGAGATCCCGTCCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TTAAGCCTGGGAAAGTGGGGCCCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCATCCTGATCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LSLGKWGPAGTT*MGQLSHPDLEE
Trigger: CTCCTCCAGATCAGGATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGGGCCCCACTTTCCCAGGCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 72 bp GCAAGTTGCGGAAGCCAGGCAAGGCCTTGGCCCACTTaGCCACATGCACAAGCTGCCTCTCTCCAAGCTCAT +
Preference number: 6 (lower is better)
Translates to: ASCGSQARPWPT*PHAQAASLQAH
Trigger: ATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCGCAACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TCTGGAACAGATTCTGGAACGCTCCTCGATAGGTCTTaGATGGGGGCCGTGGGTAGACCCTTCCCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: SGTDSGTLLDRS*MGAVGRPFPAL
Trigger: TAGGGCTGGGAAGGGTCTACCCACGGCCCCCATCCAAGACCTATCGAGGAGCGTTCCAGAATCTGTTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp CGACGCGTACATGCAGTCTCCCCGAAGCTGTTCCCCTaGACTCAGATGTTCCAATGCTTCCACACCCAATCC +
Preference number: 6 (lower is better)
Translates to: RRVHAVSPKLFP*TQMFQCFHTQS
Trigger: GGATTGGGTGTGGAAGCATTGGAACATCTGAGTCCAGGGGAACAGCTTCGGGGAGACTGCATGTACGCGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 72 bp TCATCCACATGCAAGTTGCGGAAGCCAGGCAAGGCCTaGGCCCACTTGACCACATGCACAAGCTGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SSTCKLRKPGKA*AHLTTCTSCLS
Trigger: AGAGAGGCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCGCAACTTGCATGTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp GGATCTCAAGTGTCCCAGAGCTACCTGCTTCACTGCTaGCAGAGCACCCCAAGCTCTCACCTTCCAATCCTT +
Preference number: 6 (lower is better)
Translates to: GSQVSQSYLLHC*QSTPSSHLPIL
Trigger: AAGGATTGGAAGGTGAGAGCTTGGGGTGCTCTGGCAGCAGTGAAGCAGGTAGCTCTGGGACACTTGAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp GGCAAGGCCTTGGCCCACTTGACCACATGCACAAGCTaGCTCTCTCCAAGCTCATTGAGGCTAGATAACAAG +
Preference number: 6 (lower is better)
Translates to: GKALAHLTTCTS*LSPSSLRLDNK
Trigger: CTTGTTATCTAGCCTCAATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGTCAAGTGGGCCAAGGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp AGAGGAATACTCAGCAGTCTCTTCAGTGCTTTTGCCTaGGCCTTCGTCCAGGGGAAGACCTTTGCATTCGGG +
Preference number: 6 (lower is better)
Translates to: RGILSSLFSAFA*AFVQGKTFAFG
Trigger: CCCGAATGCAAAGGTCTTCCCCTGGACGAAGGCCCAGGCAAAAGCACTGAAGAGACTGCTGAGTATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 90 bp TCATTGAGGCTAGATAACAAGGCAGCAAAGGAATCTGGTTGGTTGTaGTCATGTCCGGCACACACCACTCCTGGCTCAATGGCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLRLDNKAAKESGWL*SCPAHTTPGSMASR
Trigger: CCTGGAAGCCATTGAGCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCAGATTCCTTTGCTGCCTTGTTATCTAGCCTCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 90 bp AGCTCATTGAGGCTAGATAACAAGGCAGCAAAGGAATCTGGTTGGTaGTTGTCATGTCCGGCACACACCACTCCTGGCTCAATGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SSLRLDNKAAKESGW*LSCPAHTTPGSMAS
Trigger: GGAAGCCATTGAGCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCAGATTCCTTTGCTGCCTTGTTATCTAGCCTCAATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp ATACAGTCATCTTCTGGGATGGGTCCTCAGTGGGGCTaGCAGCATTGGAGTTTTCTCCTTCCTCCTGTAGTT +
Preference number: 6 (lower is better)
Translates to: IQSSSGMGPQWG*QHWSFLLPPVV
Trigger: AACTACAGGAGGAAGGAGAAAACTCCAATGCTGGCAGCCCCACTGAGGACCCATCCCAGAAGATGACTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TGGTTGGTTGTTGTCATGTCCGGCACACACCACTCCTaGCTCAATGGCTTCCAGGACGTTAAGAAAGATAGG +
Preference number: 6 (lower is better)
Translates to: WLVVVMSGTHHS*LNGFQDVKKDR
Trigger: CCTATCTTTCTTAACGTCCTGGAAGCCATTGAGCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TTGAGGCTAGATAACAAGGCAGCAAAGGAATCTGGTTaGTTGTTGTCATGTCCGGCACACACCACTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LRLDNKAAKESG*LLSCPAHTTPG
Trigger: GCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCAGATTCCTTTGCTGCCTTGTTATCTAGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 90 bp ACACAGACACTGCTTTACACAACTCCTTGGCACTGTCAGATATGGTaGAATTGCCCCCTAGGTAACTATCCTTGGAGGAAGAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TQTLLYTTPWHCQIW*NCPLGNYPWRKREP
Trigger: GGGCTCCCTCTTCCTCCAAGGATAGTTACCTAGGGGGCAATTCAACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGCAGTGTCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 90 bp TTGGCCCACTTGACCACATGCACAAGCTGCCTCTCTCCAAGCTCATaGAGGCTAGATAACAAGGCAGCAAAGGAATCTGGTTGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LAHLTTCTSCLSPSS*RLDNKAAKESGWLL
Trigger: CAACAACCAACCAGATTCCTTTGCTGCCTTGTTATCTAGCCTCAATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGTCAAGTGGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp CTCATCCTCACACACTGGCTGTACATCCGAGACTTGTaGATGCGGTACTCATTGAAAACCAAGTCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: LILTHWLYIRDL*MRYSLKTKSGA
Trigger: TGCACCTGACTTGGTTTTCAATGAGTACCGCATGCACAAGTCTCGGATGTACAGCCAGTGTGTGAGGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp GTGGAAAGTAATAGTCGATGGGTAAAACATGGTCCCTaGTACTGTCCAAACGCATGTCCCCATAAGGTCCGG +
Preference number: 6 (lower is better)
Translates to: VESNSRWVKHGP*YCPNACPHKVR
Trigger: CCGGACCTTATGGGGACATGCGTTTGGACAGTACCAGGGACCATGTTTTACCCATCGACTATTACTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TCAGGCAGGTCTTCTGGGGTGGAAAGTAATAGTCGATaGGTAAAACATGGTCCCTGGTACTGTCCAAACGCA +
Preference number: 6 (lower is better)
Translates to: SGRSSGVESNSR*VKHGPWYCPNA
Trigger: TGCGTTTGGACAGTACCAGGGACCATGTTTTACCCATCGACTATTACTTTCCACCCCAGAAGACCTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 72 bp CTAGATAACAAGGCAGCAAAGGAATCTGGTTGGTTGTaGTCATGTCCGGCACACACCACTCCTGGCTCAATG +
Preference number: 6 (lower is better)
Translates to: LDNKAAKESGWL*SCPAHTTPGSM
Trigger: CATTGAGCCAGGAGTGGTGTGTGCCGGACATGACAACAACCAACCAGATTCCTTTGCTGCCTTGTTATCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 72 bp AGAATCCAGGAGCTTGGTGAGCTGGTAGAAGCGCCTTaGGCAGGATGTGGGATTCTTTCTTTTGCATGCAAT +
Preference number: 6 (lower is better)
Translates to: RIQELGELVEAP*AGCGILSFACN
Trigger: ATTGCATGCAAAAGAAAGAATCCCACATCCTGCTCAAGGCGCTTCTACCAGCTCACCAAGCTCCTGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 72 bp AATCCCATGGACACAGACACTGCTTTACACAACTCCTaGGCACTGTCAGATATGGTTGAATTGCCCCCTAGG +
Preference number: 6 (lower is better)
Translates to: NPMDTDTALHNS*ALSDMVELPPR
Trigger: CCTAGGGGGCAATTCAACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGCAGTGTCTGTGTCCATGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 72 bp TTGACCACATGCACAAGCTGCCTCTCTCCAAGCTCATaGAGGCTAGATAACAAGGCAGCAAAGGAATCTGGT +
Preference number: 6 (lower is better)
Translates to: LTTCTSCLSPSS*RLDNKAAKESG
Trigger: ACCAGATTCCTTTGCTGCCTTGTTATCTAGCCTCAATGAGCTTGGAGAGAGGCAGCTTGTGCATGTGGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 90 bp GTGGAAATAGATGGGCTTGACTTTCCCAGAAAGGATCTTGGGCACTaGCACAGAGATGATCTCTGCCATCATTTCAGGAAAGTCCACGCT +
Preference number: 6 (lower is better)
Translates to: VEIDGLDFPRKDLGH*HRDDLCHHFRKVHA
Trigger: AGCGTGGACTTTCCTGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGGAAAGTCAAGCCCATCTATTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 72 bp AGCTCTCACCTTCCAATCCTTTGGCGTAACCTCCCTTaGAAGAGGAATACTCAGCAGTCTCTTCAGTGCTTT +
Preference number: 6 (lower is better)
Translates to: SSHLPILWRNLP*KRNTQQSLQCF
Trigger: AAAGCACTGAAGAGACTGCTGAGTATTCCTCTTTCAAGGGAGGTTACGCCAAAGGATTGGAAGGTGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CAA 72 bp CTGCTTTACACAACTCCTTGGCACTGTCAGATATGGTaGAATTGCCCCCTAGGTAACTATCCTTGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LLYTTPWHCQIW*NCPLGNYPWRK
Trigger: CTTCCTCCAAGGATAGTTACCTAGGGGGCAATTCAACCATATCTGACAGTGCCAAGGAGTTGTGTAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 72 bp AAGAAAGATAGGCTGACATTCATAGCCTTCAATGTGTaGTACAGTCATCTTCTGGGATGGGTCCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: KKDRLTFIAFNV*YSHLLGWVLSG
Trigger: CCCACTGAGGACCCATCCCAGAAGATGACTGTATCACACATTGAAGGCTATGAATGTCAGCCTATCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS TCA 72 bp ACCATATGGGACTTGATTAGCAGGTCAAAAGTGAACTaGTGCAGCTCTCTTGCAATAGGCTGCACAGAATCC +
Preference number: 6 (lower is better)
Translates to: TIWDLISRSKVN*CSSLAIGCTES
Trigger: GGATTCTGTGCAGCCTATTGCAAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAATCAAGTCCCATATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp TCCTCCGAAATTTATCAATGGTACAATCGTTTCTGCTaGCACATAGATACTTCTGTTTCCCTTCAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SSEIYQWYNRFC*HIDTSVSLQRL
Trigger: GAGCCGCTGAAGGGAAACAGAAGTATCTATGTGCCAGCAGAAACGATTGTACCATTGATAAATTTCGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS GCA 72 bp TTTTCCTCCGAAATTTATCAATGGTACAATCGTTTCTaGTGGCACATAGATACTTCTGTTTCCCTTCAGCGG +
Preference number: 6 (lower is better)
Translates to: FSSEIYQWYNRF*WHIDTSVSLQR
Trigger: CCGCTGAAGGGAAACAGAAGTATCTATGTGCCAGCAGAAACGATTGTACCATTGATAAATTTCGGAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9
CDS CCA 72 bp GACAAGATGGGCAATTTTTCCTCCGAAATTTATCAATaGTACAATCGTTTCTGCTGGCACATAGATACTTCT +
Preference number: 6 (lower is better)
Translates to: DKMGNFSSEIYQ*YNRFCWHIDTS
Trigger: AGAAGTATCTATGTGCCAGCAGAAACGATTGTACCATTGATAAATTTCGGAGGAAAAATTGCCCATCTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052837.9