Pregenerated sensors for AQP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032204Ensembl transcript IDs: ENSMUST00000060917.12, ENSMUST00000074465.9, ENSMUST00000113570.8, ENSMUST00000144618.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACCAGAAGTTATTTCCAAATGTGAAGACCTCAAATCCCCATCCTaGCAGAGCAGTGAAGAGCCTGGGGCTGAGGTCTCGAGCAGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: PPEVISKCEDLKSPS*QSSEEPGAEVSSRV Trigger: AACCCTGCTCGAGACCTCAGCCCCAGGCTCTTCACTGCTCTGGCAGGATGGGGATTTGAGGTCTTCACATTTGGAAATAACTTCTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR GCA 90 bp | GGCATAAGGCAACACTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTaGTCAGGTCACCTGAATTTCTCATTTGAGAAGAATGCTGTGGTC | + |
|
Preference number: 1 (lower is better) Translates to: GIRQHSKPPAEERAT*SGHLNFSFEKNAVV Trigger: GACCACAGCATTCTTCTCAAATGAGAAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAGTGTTGCCTTATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR TCA 90 bp | ACTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTaGATTTCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: TQSPLQKKGQLAQVT*ISHLRRMLWSFTSD Trigger: GTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGAAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CCA 90 bp | TCATACAGGGTAAGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATaGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: SYRVRKVSEAIQPST*SSFQNLSNHLGVRS Trigger: AGACCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTACCCTGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR CCA 90 bp | GATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTaGGGAAACTTGCTGTTATCGAGGAACGCCGGGCTTTTAAACAGT | + |
|
Preference number: 1 (lower is better) Translates to: DVSHSCLVLLVLQST*GNLLLSRNAGLLNS Trigger: ACTGTTTAAAAGCCCGGCGTTCCTCGATAACAGCAAGTTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTGAATTTTGGGCTCCAGGCCTCTaGGGACCCCCAGGTTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TLKAPCRRKGNLLRSPEFWAPGL*GPPGFW Trigger: CCAGAAACCTGGGGGTCCCCAGAGGCCTGGAGCCCA...AAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CAA 90 bp | AGCCTGGGGCTGAGGTCTCGAGCAGGGTTCATGGCACAACCAGAGTaGAGTCCGAGAGAACAGGAAATGACAATGATTAGGAGGCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: SLGLRSRAGFMAQPE*SPREQEMTMIRRPM Trigger: CATTGGCCTCCTAATCATTGTCATTTCCTGTTCTCTCGGACTCAACTCTGGTTGTGCCATGAACCCTGCTCGAGACCTCAGCCCCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAAGTCTCCAGGAGAGGCTaGGGAGGGCTGGCAGGGACG | + |
|
Preference number: 2 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKVSRRG*GGLAGT Trigger: CGTCCCTGCCAGCCCTCCTCAGCCTCTCCTGGAGAC...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCACCTCAGACAATTGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAACCGTCAGCTAGAGAGGGTTaGGTAGATGTCCCCACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IHLRQLLLGSNWIRRVEPSAREG*VDVPTP Trigger: TGGGGTGGGGACATCTACCCAACCCTCTCTAGCTGA...CGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCGTGAAACAGAACCTTTaGTCACCTTTGATCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: EGWVDVPTPSLHRHTDAIVKQNL*SPLITQ Trigger: CTGTGTGATCAAAGGTGACCAAAGGTTCTGTTTCAC...GATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR CAA 90 bp | TGGTCATGCCACTACATGATGACGCTGAGTTCGTGTTTTTCTAGATaGTTCTCGGCTGGTTCTGCCTTCACTTCTGGGTCGGGGTTCGAG | + |
|
Preference number: 2 (lower is better) Translates to: WSCHYMMTLSSCFSR*FSAGSAFTSGSGFE Trigger: CTCGAACCCCGACCCAGAAGTGAAGGCAGAACCAGCCGAGAACAATCTAGAAAAACACGAACTCAGCGTCATCATGTAGTGGCATGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CAA 90 bp | GGCTGGTTCTGCCTTCACTTCTGGGTCGGGGTTCGAGTGATGCATTaGGATAAAAAGAACATAGATGAGACCTCCCAGGACAGCTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GWFCLHFWVGVRVMH*DKKNIDETSQDSSN Trigger: ATTGGAGCTGTCCTGGGAGGTCTCATCTATGTTCTTTTTATCCAAATGCATCACTCGAACCCCGACCCAGAAGTGAAGGCAGAACCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CAA 90 bp | TCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTaGGGATCAAACTGGATAAGGCGCGTGGAACCGGGGGTCCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFEKNAVVIHLRQLL*GSNWIRRVEPGVLK Trigger: CTTTAGGACCCCCGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTATCAGCTAGAGAGGGTTaGGTAGATGTCCCCACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IQPSTWSSFQNLSNHLGVSAREG*VDVPTP Trigger: TGGGGTGGGGACATCTACCCAACCCTCTCTAGCTGA...TACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGCTGGCAGGGACGGAGACAGAGAGCCACTAAGGAAGAAAGGCCTCTGTTTTTTCATGGATGCCTTTaGGATTTATTTTTGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EGWQGRRQRATKEERPLFFHGCL*DLFLSQ Trigger: CTGGGACAAAAATAAATCCCAAAGGCATCCATGAAA...AAACAGAGGCCTTTCTTCCTTAGTGGCTCTCTGTCTCCGTCCCTGCCAGCCCTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CAA 90 bp | AATTTCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATaGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAACCGGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: NFSFEKNAVVIHLRQ*LLGSNWIRRVEPGV Trigger: GACCCCCGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CAA 90 bp | CAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTaGCAAAGCACCTGGGGAAACTTGCTGTTATCGAGGAACGCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: QDITDVSHSCLVLLV*QSTWGNLLLSRNAG Trigger: CCCGGCGTTCCTCGATAACAGCAAGTTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAAGGTAAGAAAAGTCTCTaGGGCCATCCAGCCGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKGKKSL*GHPAEH Trigger: GTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTACC...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGTATTAGTGGTAGCGCTCAGCTTGGTAGAGTGTTAACCCTTTGCTCCCCAACCTTTGGTCACCTTTaGTCACACAGTTTCATACAG | + |
|
Preference number: 2 (lower is better) Translates to: MGISGSAQLGRVLTLCSPTFGHL*SHSFIQ Trigger: CTGTATGAAACTGTGTGATCAAAGGTGACCAAAGGT...TGGGGAGCAAAGGGTTAACACTCTACCAAGCTGAGCGCTACCACTAATACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCATCAGCTAGAGAGGGTTaGGTAGATGTCCCCACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SAGYHRCFSFMSCSVSLASAREG*VDVPTP Trigger: TGGGGTGGGGACATCTACCCAACCCTCTCTAGCTGA...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCACCTCAGACAATTGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAACCGTTCATAGGTGTTAAGTaGATCCACTGTTTGGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IHLRQLLLGSNWIRRVEPFIGVK*IHCLAF Trigger: AAAGGCCAAACAGTGGATGCACTTAACACCTATGAA...CGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAAAAAGAACATAGATGAGACCTCCCAGGACAGCTCCAATCATAGGGCCCACATCCAGCCGAGCACATaGTCAAGTTTCCAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: DKKNIDETSQDSSNHRAHIQPST*SSFQNL Trigger: AAGATTTTGGAAACTTGACCATGTGCTCGGCTGGAT...GTGGGCCCTATGATTGGAGCTGTCCTGGGAGGTCTCATCTATGTTCTTTTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTGAATTTTACATCTTCATTCTTTaGAGCTCACTGATGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TLKAPCRRKGNLLRSPEFYIFIL*SSLMES Trigger: GCTTTCCATCAGTGAGCTCCAAAGAATGAAGATGTA...AAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTTGGGATCCTGAGGTTTCTAAATaGCACTGCCTTCTTCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SHLRRMLWSFTSDNCCWDPEVSK*HCLLPA Trigger: AGCTGGAAGAAGGCAGTGGCATTTAGAAACCTCAGG...ATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTAAGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAATTTCATGGATGCCTTTaGGATTTATTTTTGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RVRKVSEAIQPSTWSSFQFHGCL*DLFLSQ Trigger: CTGGGACAAAAATAAATCCCAAAGGCATCCATGAAA...TTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCACTGCCTTCTTCCAGTTTCTAAATGCCACTaGCTTCTTCCAGCTGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: FPKFISCPEVSKCHCLLPVSKCH*LLPAAV Trigger: GACAGCAGCTGGAAGAAGGCAGTGGCATTTAGAAAC...TGGAAGAAGGCAGTGGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGAGAGTGTTAACCCTTTaGTCCCCACTTCATAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TAQDITDVSHSCLVLLVLRVLTL*SPLHRC Trigger: ACACCTATGAAGTGGGGAGCAAAGGGTTAACACTCT...CAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAGAGTGTTAACCCTTTaGTCCCCACTTCATAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SAGYHRCFSFMSCSVSLARVLTL*SPLHRC Trigger: ACACCTATGAAGTGGGGAGCAAAGGGTTAACACTCT...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAACCTTTGGTCACCTTTaGTCACACAGTTTCATACAG | + |
|
Preference number: 2 (lower is better) Translates to: SAGYHRCFSFMSCSVSLATFGHL*SHSFIQ Trigger: CTGTATGAAACTGTGTGATCAAAGGTGACCAAAGGT...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGCCATTCAGTTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCAGAGTGTTAACCCTTTaGTCCCCACTTCATAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RKPFSFPNLSHVLRFLNARVLTL*SPLHRC Trigger: ACACCTATGAAGTGGGGAGCAAAGGGTTAACACTCT...GGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAACTGAATGGCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGATCCAGCCGAGCACATaGTCAAGTTTCCAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: TAQDITDVSHSCLVLLVLIQPST*SSFQNL Trigger: AAGATTTTGGAAACTTGACCATGTGCTCGGCTGGAT...CAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAACCTGAATTTCTCATTTaGGAAGAATGCTGTGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKPEFLI*EECCGH Trigger: ATGACCACAGCATTCTTCTCAAATGAGAAATTCAGG...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCATTCTGGAGTCAAAGATaGCAAAGACAATCAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SAGYHRCFSFMSCSVSLAFWSQR*QRQSEG Trigger: TCCTTCTGATTGTCTTTGCCATCTTTGACTCCAGAA...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CCA 72 bp | CAATGGGCTCCAGGCCTCTGGGGACCCCCAGGTTTCTaGAGTCAAAGATGGCAAAGACAATCAGAAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QWAPGLWGPPGF*SQRWQRQSEGG Trigger: TCCTCCTTCTGATTGTCTTTGCCATCTTTGACTCCAGAAACCTGGGGGTCCCCAGAGGCCTGGAGCCCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CCA 72 bp | TCCAGCTGCTGTCTGCTGCTTTCTCCAGCCCTAGGTTaGGAGAAGATGGGTATTAGTGGTAGCGCTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSCCLLLSPALG*EKMGISGSAQL Trigger: AAGCTGAGCGCTACCACTAATACCCATCTTCTCCCAACCTAGGGCTGGAGAAAGCAGCAGACAGCAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CCA 72 bp | GTCATTCACCTCAGACAATTGCTGTTGGGATCAAACTaGATAAGGCGCGTGGAACCGGGGGTCCTAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VIHLRQLLLGSN*IRRVEPGVLKP Trigger: GGGCTTTAGGACCCCCGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTGTGAAACAGAACCTTaGGTCACCTTTGATCACACA | + |
|
Preference number: 3 (lower is better) Translates to: EGWVDVPTPSLHRHTDAICETEP*VTFDHT Trigger: TGTGTGATCAAAGGTGACCAAAGGTTCTGTTTCACA...GATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTGAATTTCTCCTCAGACAATTGCTGTaGGGATCAAACTGGATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKAPCRRKGNLLRSPEFLLRQLL*GSNWIR Trigger: CCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAG...GAGAAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR TCA 72 bp | TTATCGAGGAACGCCGGGCTTTTAAACAGTTGGCAGTaGAGGCACACCCCTGATACAGAACAGTTCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSRNAGLLNSWQ*RHTPDTEQFFL Trigger: GAGAAAGAACTGTTCTGTATCAGGGGTGTGCCTTCACTGCCAACTGTTTAAAAGCCCGGCGTTCCTCGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTAAGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAACTTTGGGATTTATTTTaGTCCCAGTCAGCTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVRKVSEAIQPSTWSSFQLWDLF*SQSARE Trigger: CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAG...TTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR TCA 72 bp | CCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTaGATTTCTCATTTGAGAAGAATGCTGTGGTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: PLQKKGQLAQVT*ISHLRRMLWSF Trigger: GAATGACCACAGCATTCTTCTCAAATGAGAAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR TCA 72 bp | CGGGCTTTTAAACAGTTGGCAGTGAAGGCACACCCCTaGTACAGAACAGTTCTTTCTCTGGTTGGAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RAFKQLAVKAHP*YRTVLSLVGSN Trigger: GTTACTTCCAACCAGAGAAAGAACTGTTCTGTATCAGGGGTGTGCCTTCACTGCCAACTGTTTAAAAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAATATCAAACGGCTACCTaGTCCCTTCATCCGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKYQTAT*SLHPCL Trigger: GAGGCACGGATGAAGGGACAAGGTAGCCGTTTGATA...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CCA 72 bp | GTAAGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATaGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VRKVSEAIQPST*SSFQNLSNHLG Trigger: TCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTCTTTGGGATTTATTTTaGTCCCAGTCAGCTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKVSEAIQPSTWSSFQNLLWDLF*SQSARE Trigger: CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAG...AAGATTTTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAACTTGCTCCCGACCTTATCCTTTaGTCCCAGGGACTTTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: FSFMSCSVSLAKHLGKLAPDLIL*SQGLYL Trigger: TAGATAAAGTCCCTGGGACAAAAGGATAAGGTCGGG...AGCAAGTTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCCACTAGCTTTTAGTTaGGGCTTCTGGGGATATGGA | + |
|
Preference number: 3 (lower is better) Translates to: TAQDITDVSHSCLVLLVLPLAFS*GFWGYG Trigger: TCCATATCCCCAGAAGCCCAAACTAAAAGCTAGTGG...CAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCACCCGACCTTATCCTTTaGTCCCAGGGACTTTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SAGYHRCFSFMSCSVSLAPDLIL*SQGLYL Trigger: TAGATAAAGTCCCTGGGACAAAAGGATAAGGTCGGG...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAACTTGCTCTTTGGGATTTATTTTaGTCCCAGTCAGCTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FSFMSCSVSLAKHLGKLALWDLF*SQSARE Trigger: CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAG...AGCAAGTTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGTCTTCCATCCTTTGGGATTTATTTTaGTCCCAGTCAGCTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TWSSFQNLSNHLGVRSSILWDLF*SQSARE Trigger: CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAG...GATGGAAGACCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAACTTGCTATACATCTTCATTCTTaGGAGCTCACTGATGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FSFMSCSVSLAKHLGKLAIHLHS*ELTDGK Trigger: CTTTCCATCAGTGAGCTCCAAAGAATGAAGATGTAT...AGCAAGTTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR GCA 72 bp | GAACATTATCAAACGGCTACCTTGTCCCTTCATCCGTaGCTCAGTAAAACTGGGAATAAAAACAGTAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: EHYQTATLSLHP*LSKTGNKNSKH Trigger: ATGTTTACTGTTTTTATTCCCAGTTTTACTGAGGCACGGATGAAGGGACAAGGTAGCCGTTTGATAATGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCACTGCCTTCTTCTTTTCATGGATGCCTTaGGGATTTATTTTTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SFPNLSHVLRFLNATAFFFSWMP*GFIFVP Trigger: TGGGACAAAAATAAATCCCAAAGGCATCCATGAAAA...GAAGAAGGCAGTGGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATTTCAGGGCCAGCCTCTaGACGAGGTTCTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRCPHPKSAQAHRCHFRASL*TRFFLA Trigger: AGCCAAGAAGAACCTCGTGCAGAGGCTGGCCCTGAA...ATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGCAGGGACGGAGACAGAGAGCCACTAAGGAAGAAAGGCCTCTGTTTACCGCTGGGTTGATGTaGCCCCCAGAGACACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGWQGRRQRATKEERPLFTAGLM*PPETPK Trigger: TTTTGGTGTCTCTGGGGGCCACATCAACCCAGCGGT...AAACAGAGGCCTTTCTTCCTTAGTGGCTCTCTGTCTCCGTCCCTGCCAGCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTAAGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAATGGGCTCCAGGCCTCTaGGGACCCCCAGGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVRKVSEAIQPSTWSSFQWAPGL*GPPGFW Trigger: CCAGAAACCTGGGGGTCCCCAGAGGCCTGGAGCCCA...TTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTTAATGCCAAAGACAGTTaGAGCCCCGACAAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGRCPHPKSAQAHRCHLNAKDS*SPDKGS Trigger: GGAGCCTTTGTCGGGGCTGCAACTGTCTTTGGCATT...AAGATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCGGACCCCCAGGTTTCTaGAGTCAAAGATGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGWVDVPTPSLHRHTDAIGPPGF*SQRWQR Trigger: TCTTTGCCATCTTTGACTCCAGAAACCTGGGGGTCC...GATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCGGACCCCCAGGTTTCTaGAGTCAAAGATGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: REGWVDVPTPSLHRHTDAGPPGF*SQRWQR Trigger: TCTTTGCCATCTTTGACTCCAGAAACCTGGGGGTCC...GGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTTTCGACTGAGGACTGCTTaGGCAATAGAGCCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWVDVPTPSLHRHTDAIFRLRTA*AIEPHP Trigger: TGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCG...AAAGATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCGGTATGTCGCGAAAATaGACGCCGTTCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REGWVDVPTPSLHRHTDAGMSRK*TPFHFL Trigger: GAGAAAATGGAACGGCGTTCATTTTCGCGACATACC...GGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTCCAAAGGTGCACATTaGAAAAGACACCGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGWVDVPTPSLHRHTDAISKGAH*KRHRWV Trigger: AACCCAGCGGTGTCTTTTGCAATGTGCACCTTTGGA...GATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCTCCAAAGGTGCACATTaGAAAAGACACCGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: REGWVDVPTPSLHRHTDASKGAH*KRHRWV Trigger: AACCCAGCGGTGTCTTTTGCAATGTGCACCTTTGGA...GGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGCAGGGACGGAGACAGAGAGCCACTAAGGAAGAAAGGCCTCTGTTTGGACCCCCAGGTTTCTaGAGTCAAAGATGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGWQGRRQRATKEERPLFGPPGF*SQRWQR Trigger: TCTTTGCCATCTTTGACTCCAGAAACCTGGGGGTCC...AAACAGAGGCCTTTCTTCCTTAGTGGCTCTCTGTCTCCGTCCCTGCCAGCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTTTCCAAAGGTGCACATTaGAAAAGACACCGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGRCPHPKSAQAHRCHLSKGAH*KRHRWV Trigger: AACCCAGCGGTGTCTTTTGCAATGTGCACCTTTGGA...AAGATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTTCCATCCTTCCAAAGGTaGACATTGCAAAAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGRCPHPKSAQAHRCHLPSFQR*TLQKTP Trigger: CGGTGTCTTTTGCAATGTGCACCTTTGGAAGGATGG...AAGATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTTGTCCGTCATAGTAAATaGCAAAGACAGTTGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGRCPHPKSAQAHRCHLVRHSK*QRQLQP Trigger: GGGCTGCAACTGTCTTTGGCATTTACTATGACGGAC...AAGATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATCTGGCACGGATACAAATaGTTTTGGGTATGTCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGWVDVPTPSLHRHTDAIWHGYK*FWVCRE Trigger: TTCGCGACATACCCAAAACCATTTGTATCCGTGCCA...GATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGTATTAGTGGTAGCGCTCAGCTTGGTAGAGTGTTAACCCTTTGCTCCCCAACCGCTGGGTTGATGTaGCCCCCAGAGACACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MGISGSAQLGRVLTLCSPTAGLM*PPETPK Trigger: TTTTGGTGTCTCTGGGGGCCACATCAACCCAGCGGT...TGGGGAGCAAAGGGTTAACACTCTACCAAGCTGAGCGCTACCACTAATACCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTAAGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAAACCGCTGGGTTGATGTaGCCCCCAGAGACACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVRKVSEAIQPSTWSSFQTAGLM*PPETPK Trigger: TTTTGGTGTCTCTGGGGGCCACATCAACCCAGCGGT...TTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCTTACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATTGGCACGGATACAAATaGTTTTGGGTATGTCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRCPHPKSAQAHRCHWHGYK*FWVCRE Trigger: TTCGCGACATACCCAAAACCATTTGTATCCGTGCCA...ATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGTATTAGTGGTAGCGCTCAGCTTGGTAGAGTGTTAACCCTTTGCTCCCCACGACTGAGGACTGCTTaGGCAATAGAGCCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGISGSAQLGRVLTLCSPRLRTA*AIEPHP Trigger: TGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCG...TGGGGAGCAAAGGGTTAACACTCTACCAAGCTGAGCGCTACCACTAATACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGTGGGCTCCAGGCCTCTaGGGACCCCCAGGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAQDITDVSHSCLVLLVLWAPGL*GPPGFW Trigger: CCAGAAACCTGGGGGTCCCCAGAGGCCTGGAGCCCA...CAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGTGGGCTCCAGGCCTCTaGGGACCCCCAGGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVFHGCLWDLFLSQSAREWAPGL*GPPGFW Trigger: CCAGAAACCTGGGGGTCCCCAGAGGCCTGGAGCCCA...CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| 3UTR CAA 72 bp | GTGGAACCGGGGGTCCTAAAGCCCGACCTTATCCTTTaGTCCCAGGGACTTTATCTACCTCCAACTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VEPGVLKPDLIL*SQGLYLPPTLV Trigger: GACTAAAGTTGGAGGTAGATAAAGTCCCTGGGACAAAAGGATAAGGTCGGGCTTTAGGACCCCCGGTTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | AAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTaGGGATCAAACTGGATAAGGCGCGTGGAACCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAVVIHLRQLL*GSNWIRRVEPG Trigger: CCCCGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCACCGGGCCTGATGACCTaGGCTCCATCCCTAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGYHRCFSFMSCSVSLAPGLMT*APSLES Trigger: GGACTCTAGGGATGGAGCTCAGGTCATCAGGCCCGG...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS-3UTR GCA 90 bp | ATGATGACGCTGAGTTCGTGTTTTTCTAGATTGTTCTCGGCTGGTTCTGCCTTCTTCAGGGCCAGCCTCTaGACGAGGTTCTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MMTLSSCFSRLFSAGSAFFRASL*TRFFLA Trigger: AGCCAAGAAGAACCTCGTGCAGAGGCTGGCCCTGAA...GAAGGCAGAACCAGCCGAGAACAATCTAGAAAAACACGAACTCAGCGTCATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTGAATTTCTAGAGTCCACATGGTaGAAGGATGGTGGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKAPCRRKGNLLRSPEFLESTW*KDGGRR Trigger: TCTCCTTCCACCATCCTTCCACCATGTGGACTCTAG...AAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCGGATACAAATGGTTTTaGGTATGTCGCGAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: REGWVDVPTPSLHRHTDAGYKWF*VCRENE Trigger: TTCATTTTCGCGACATACCCAAAACCATTTGTATCC...GGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTTGGGTAGATGTCCCCACCCCAAGTCTGCACAGGCACACAGATGCCATTTCTGGAGTCAAAGATaGCAAAGACAATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRCPHPKSAQAHRCHFWSQR*QRQSEG Trigger: TCCTTCTGATTGTCTTTGCCATCTTTGACTCCAGAA...ATGGCATCTGTGTGCCTGTGCAGACTTGGGGTGGGGACATCTACCCAACCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| 3UTR CAA 72 bp | CTGAGGTCTCGAGCAGGGTTCATGGCACAACCAGAGTaGAGTCCGAGAGAACAGGAAATGACAATGATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSRAGFMAQPE*SPREQEMTMIR Trigger: CCTAATCATTGTCATTTCCTGTTCTCTCGGACTCAACTCTGGTTGTGCCATGAACCCTGCTCGAGACCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | ATTCACCTCAGACAATTGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAACCGCCATCCTTCCAAAGGTaGACATTGCAAAAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: IHLRQLLLGSNWIRRVEPPSFQR*TLQKTP Trigger: CGGTGTCTTTTGCAATGTGCACCTTTGGAAGGATGG...CGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAATGCCAAAGACAGTTaGAGCCCCGACAAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKVSEAIQPSTWSSFQNLNAKDS*SPDKGS Trigger: GGAGCCTTTGTCGGGGCTGCAACTGTCTTTGGCATT...AAGATTTTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | ATTCACCTCAGACAATTGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAACCGGTCCGTCATAGTAAATaGCAAAGACAGTTGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IHLRQLLLGSNWIRRVEPVRHSK*QRQLQP Trigger: GGGCTGCAACTGTCTTTGGCATTTACTATGACGGAC...CGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGTATTAGTGGTAGCGCTCAGCTTGGTAGAGTGTTAACCCTTTGCTCCCCAGTCCGTCATAGTAAATaGCAAAGACAGTTGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MGISGSAQLGRVLTLCSPVRHSK*QRQLQP Trigger: GGGCTGCAACTGTCTTTGGCATTTACTATGACGGAC...TGGGGAGCAAAGGGTTAACACTCTACCAAGCTGAGCGCTACCACTAATACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTGCACGAGGTTCTTCTTaGCTCGGTCCTTCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKVSEAIQPSTWSSFQNLARGSS*LGPSQK Trigger: CTTCTGAGAAGGACCGAGCCAAGAAGAACCTCGTGC...AAGATTTTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | TGCCTTCACTTCTGGGTCGGGGTTCGAGTGATGCATTaGGATAAAAAGAACATAGATGAGACCTCCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLHFWVGVRVMH*DKKNIDETSQD Trigger: GTCCTGGGAGGTCTCATCTATGTTCTTTTTATCCAAATGCATCACTCGAACCCCGACCCAGAAGTGAAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | CACTACATGATGACGCTGAGTTCGTGTTTTTCTAGATaGTTCTCGGCTGGTTCTGCCTTCACTTCTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HYMMTLSSCFSR*FSAGSAFTSGS Trigger: CGACCCAGAAGTGAAGGCAGAACCAGCCGAGAACAATCTAGAAAAACACGAACTCAGCGTCATCATGTAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGGGTATGTCGCGAAAATaGACGCCGTTCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPSTWSSFQNLSNHLGVRGMSRK*TPFHFL Trigger: GAGAAAATGGAACGGCGTTCATTTTCGCGACATACC...CCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGCAGGCCATTTTCAGATaGACTTGTGTGCATTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSTWSSFQNLSNHLGVRQAIFR*TCVHWC Trigger: GCACCAATGCACACAAGTGCATCTGAAAATGGCCTG...CCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS-3UTR CCA 90 bp | ATTCACCTCAGACAATTGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAACCGTGGCACGGATACAAATaGTTTTGGGTATGTCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHLRQLLLGSNWIRRVEPWHGYK*FWVCRE Trigger: TTCGCGACATACCCAAAACCATTTGTATCCGTGCCA...CGGTTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAATGGTGGAAGGAGAGCTaGCTCCAGCAGGCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKWWKES*LQQAIF Trigger: GAAAATGGCCTGCTGGAGTCAGCTCTCCTTCCACCA...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS-3UTR TCA 90 bp | ACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGTCTTCCATCCGACTGAGGACTGCTTaGGCAATAGAGCCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSFQNLSNHLGVRSSIRLRTA*AIEPHP Trigger: TGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCG...GATGGAAGACCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTTGGGATAATGCCAAAGACAGTTaGAGCCCCGACAAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLRRMLWSFTSDNCCWDNAKDS*SPDKGS Trigger: GGAGCCTTTGTCGGGGCTGCAACTGTCTTTGGCATT...ATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGTCTTCCATCAATGCCAAAGACAGTTaGAGCCCCGACAAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWSSFQNLSNHLGVRSSINAKDS*SPDKGS Trigger: GGAGCCTTTGTCGGGGCTGCAACTGTCTTTGGCATT...GATGGAAGACCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGTTCAGGGCCAGCCTCTaGACGAGGTTCTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVFHGCLWDLFLSQSAREFRASL*TRFFLA Trigger: AGCCAAGAAGAACCTCGTGCAGAGGCTGGCCCTGAA...CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCACTGCCTTCTTCACCGCTGGGTTGATGTaGCCCCCAGAGACACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPNLSHVLRFLNATAFFTAGLM*PPETPK Trigger: TTTTGGTGTCTCTGGGGGCCACATCAACCCAGCGGT...GAAGAAGGCAGTGGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGGGTGCACGAGGTTCTTCTTaGCTCGGTCCTTCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFHGCLWDLFLSQSAREGARGSS*LGPSQK Trigger: CTTCTGAGAAGGACCGAGCCAAGAAGAACCTCGTGC...ACCCTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGGCACGAGGTTCTTCTTaGCTCGGTCCTTCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVFHGCLWDLFLSQSAREARGSS*LGPSQK Trigger: CTTCTGAGAAGGACCGAGCCAAGAAGAACCTCGTGC...CTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | TTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATaGCTGTTGGGATCAAACTGGATAAGGCGCGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FEKNAVVIHLRQ*LLGSNWIRRVE Trigger: TTCCACGCGCCTTATCCAGTTTGATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | AACATGGTAGACACCACCTGTAGACTTGGCCGTGCATaGATACATCTTCATTCTTTGGAGCTCACTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NMVDTTCRLGRA*IHLHSLELTDG Trigger: TCCATCAGTGAGCTCCAAAGAATGAAGATGTATCAATGCACGGCCAAGTCTACAGGTGGTGTCTACCATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACATAAAAGGGGAACTTaGACCACTCCATCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IQPSTWSSFQNLSNHLGVHKRGT*TTPSFQ Trigger: TTGGAAGGATGGAGTGGTTCAAGTTCCCCTTTTATG...TACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | ACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGTCTTCCATCGGTATGTCGCGAAAATaGACGCCGTTCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWSSFQNLSNHLGVRSSIGMSRK*TPFHFL Trigger: GAGAAAATGGAACGGCGTTCATTTTCGCGACATACC...GATGGAAGACCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGGGTCCATCCTTCCAAAGGTaGACATTGCAAAAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: VFHGCLWDLFLSQSAREGPSFQR*TLQKTP Trigger: CGGTGTCTTTTGCAATGTGCACCTTTGGAAGGATGG...ACCCTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTTGGGATGTCCGTCATAGTAAATaGCAAAGACAGTTGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLRRMLWSFTSDNCCWDVRHSK*QRQLQP Trigger: GGGCTGCAACTGTCTTTGGCATTTACTATGACGGAC...ATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCAAAGCCCCCTGCAGAAGAAAGGGCAACTTGCTCAGGTCACCTGAATTTGGATACAAATGGTTTTaGGTATGTCGCGAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLKAPCRRKGNLLRSPEFGYKWF*VCRENE Trigger: TTCATTTTCGCGACATACCCAAAACCATTTGTATCC...AAATTCAGGTGACCTGAGCAAGTTGCCCTTTCTTCTGCAGGGGGCTTTGAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGTATTAGTGGTAGCGCTCAGCTTGGTAGAGTGTTAACCCTTTGCTCCCCAGGATACAAATGGTTTTaGGTATGTCGCGAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGISGSAQLGRVLTLCSPGYKWF*VCRENE Trigger: TTCATTTTCGCGACATACCCAAAACCATTTGTATCC...TGGGGAGCAAAGGGTTAACACTCTACCAAGCTGAGCGCTACCACTAATACCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | AGGCACACCCCTGATACAGAACAGTTCTTTCTCTGGTaGGAAGTAACATCAGTTAGAGAAATGTCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHTPDTEQFFLW*EVTSVREMSPG Trigger: TCCTGGAGACATTTCTCTAACTGATGTTACTTCCAACCAGAGAAAGAACTGTTCTGTATCAGGGGTGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | ACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGTCTTCCATCCATAAAAGGGGAACTTaGACCACTCCATCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSFQNLSNHLGVRSSIHKRGT*TTPSFQ Trigger: TTGGAAGGATGGAGTGGTTCAAGTTCCCCTTTTATG...GATGGAAGACCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGGGTTGGGTAGATGTCAAGAGCCATCACAACTaGCGTTGCAAATCCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: CLWDLFLSQSAREGWVDVKSHHN*RCKSNI Trigger: AATATTGGATTTGCAACGGCAGTTGTGATGGCTCTT...GACATCTACCCAACCCTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGTCTCTGAGGCCATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAAGAGCCATCACAACTaGCGTTGCAAATCCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RKVSEAIQPSTWSSFQNLKSHHN*RCKSNI Trigger: AATATTGGATTTGCAACGGCAGTTGTGATGGCTCTT...AAGATTTTGGAAACTTGACCATGTGCTCGGCTGGATGGCCTCAGAGACTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGTCCAAAGGTGCACATTaGAAAAGACACCGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TAQDITDVSHSCLVLLVLSKGAH*KRHRWV Trigger: AACCCAGCGGTGTCTTTTGCAATGTGCACCTTTGGA...CAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCACCATCCTTCCAAAGGTaGACATTGCAAAAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: SAGYHRCFSFMSCSVSLAPSFQR*TLQKTP Trigger: CGGTGTCTTTTGCAATGTGCACCTTTGGAAGGATGG...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTTGGGATCTCAACCCCTCGTATTaGAGACAAAATTCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLRRMLWSFTSDNCCWDLNPSY*RQNSGA Trigger: AGCTCCAGAATTTTGTCTGCAATACGAGGGGTTGAG...ATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | ACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTaGCAAAGCACCTGGGGAAACTTGCTGTTATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDVSHSCLVLLV*QSTWGNLLLSR Trigger: CCTCGATAACAGCAAGTTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCACTGCCTTCTTCCACATAAAAGGGGAACTTaGACCACTCCATCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPKFISCPEVSKCHCLLPHKRGT*TTPSFQ Trigger: TTGGAAGGATGGAGTGGTTCAAGTTCCCCTTTTATG...TGGAAGAAGGCAGTGGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCACTGCCTTCTTCCATAAAAGGGGAACTTaGACCACTCCATCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPNLSHVLRFLNATAFFHKRGT*TTPSFQ Trigger: TTGGAAGGATGGAGTGGTTCAAGTTCCCCTTTTATG...GAAGAAGGCAGTGGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCCATTCAGTTTCCCAAATTTATCTCATGTCCTGAGGTTTCTAAATGCCGGTATGTCGCGAAAATaGACGCCGTTCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKPFSFPNLSHVLRFLNAGMSRK*TPFHFL Trigger: GAGAAAATGGAACGGCGTTCATTTTCGCGACATACC...GGCATTTAGAAACCTCAGGACATGAGATAAATTTGGGAAACTGAATGGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTAGGATACAAATGGTTTTaGGTATGTCGCGAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQPSTWSSFQNLSNHLGVGYKWF*VCRENE Trigger: TTCATTTTCGCGACATACCCAAAACCATTTGTATCC...TACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGGGTTTCTGGAGTCAAAGATaGCAAAGACAATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFHGCLWDLFLSQSAREGFWSQR*QRQSEG Trigger: TCCTTCTGATTGTCTTTGCCATCTTTGACTCCAGAA...ACCCTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| CDS-3UTR CCA 90 bp | TCTCATTTGAGAAGAATGCTGTGGTCATTCACCTCAGACAATTGCTGTTGGGATTTCTGGAGTCAAAGATaGCAAAGACAATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLRRMLWSFTSDNCCWDFWSQR*QRQSEG Trigger: TCCTTCTGATTGTCTTTGCCATCTTTGACTCCAGAA...ATCCCAACAGCAATTGTCTGAGGTGAATGACCACAGCATTCTTCTCAAATGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGAAGAGCCATCACAACTaGCGTTGCAAATCCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: TAQDITDVSHSCLVLLVLKSHHN*RCKSNI Trigger: AATATTGGATTTGCAACGGCAGTTGTGATGGCTCTT...CAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CCA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAATTGCAGACAAAATTCTaGAGCTCCCTTTTATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKLQTKF*SSLLCV Trigger: CACACATAAAAGGGAGCTCCAGAATTTTGTCTGCAA...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| 3UTR CAA 72 bp | TTTCAGACTCAGAAAATGAATTTATATGCCCATAGGTaGCACAGCGCAGGATATCACAGATGTTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FQTQKMNLYAHR*HSAGYHRCFSF Trigger: GAATGAGAAACATCTGTGATATCCTGCGCTGTGCAACCTATGGGCATATAAATTCATTTTCTGAGTCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR GCA 90 bp | GAGCGGTGTATTTTTCCCGGCCAAGGTTATAATCGTATTTTAGGTTATTATAAAAAGAGCCATCACAACTaGCGTTGCAAATCCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: ERCIFPGQGYNRILGYYKKSHHN*RCKSNI Trigger: AATATTGGATTTGCAACGGCAGTTGTGATGGCTCTT...TTTATAATAACCTAAAATACGATTATAACCTTGGCCGGGAAAAATACACCGCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS GCA 90 bp | GTGGCCCCCAGAGACACCAAAAGTCGCATAAAGAGCCATCACAACTaGCGTTGCAAATCCAATATTGATAGTGATGATCCCACCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VAPRDTKSRIKSHHN*RCKSNIDSDDPTSL Trigger: AAGGCTGGTGGGATCATCACTATCAATATTGGATTTGCAACGGCAGTTGTGATGGCTCTTTATGCGACTTTTGGTGTCTCTGGGGGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS GCA 90 bp | ATCAGCAAAGGCCATGAGTCCGTCATAGTAAATGCCAAAGACAGTTaGAGCCCCGACAAAGGCTCCCAAAAGCTGAGCTCCCACATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ISKGHESVIVNAKDS*SPDKGSQKLSSHIK Trigger: TTTTATGTGGGAGCTCAGCTTTTGGGAGCCTTTGTCGGGGCTGCAACTGTCTTTGGCATTTACTATGACGGACTCATGGCCTTTGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGAGGGTTGGGTAGATGTCAAATGCCAAAGACAGTaGCAGCCCCGACAAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLWDLFLSQSAREGWVDVKCQRQ*QPRQRL Trigger: GAGCCTTTGTCGGGGCTGCAACTGTCTTTGGCATTT...GACATCTACCCAACCCTCTCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS TCA 90 bp | TTGATAGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTGCTTaGGCAATAGAGCCACATCCAAGGACAATCATTATAAAGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LIVMIPPAFSRLRTA*AIEPHPRTIIIKVP Trigger: GGGCACCTTTATAATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS GCA 90 bp | CCCAGAGACACCAAAAGTCGCATAAAGAGCCATCACAACTGCCGTTaGAAATCCAATATTGATAGTGATGATCCCACCAGCCTTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRDTKSRIKSHHNCR*KSNIDSDDPTSLFS Trigger: CGAGAAAAGGCTGGTGGGATCATCACTATCAATATTGGATTTGCAACGGCAGTTGTGATGGCTCTTTATGCGACTTTTGGTGTCTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS GCA 90 bp | AATATTGATAGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTaGTTGAGCAATAGAGCCACATCCAAGGACGAGATAAAAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NIDSDDPTSLFSTED*LSNRATSKDEIKVP Trigger: AGGGACTTTTATCTCGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACTATCAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS-3UTR CAA 90 bp | CAGCCGAGCACATGGTCAAGTTTCCAAAATCTTAGCAATCACCTAGGAGTACGGGTTGCAAATCCAATATaGATAGTGATGATCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QPSTWSSFQNLSNHLGVRVANPI*IVMIPP Trigger: TGGTGGGATCATCACTATCAATATTGGATTTGCAAC...CCGTACTCCTAGGTGATTGCTAAGATTTTGGAAACTTGACCATGTGCTCGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS GCA 90 bp | AATATTGATAGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTaGTTGAGCAATAGAGCCACATCCAAGGACAATCATTATAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NIDSDDPTSLFSTED*LSNRATSKDNHYKG Trigger: ACCTTTATAATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACTATCAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CAA 90 bp | AGCGCAGGATATCACAGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAGTTGCAAATCCAATATaGATAGTGATGATCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGYHRCFSFMSCSVSLAVANPI*IVMIPP Trigger: TGGTGGGATCATCACTATCAATATTGGATTTGCAAC...TGCAAGACTAACAGAACAAGACATGAATGAGAAACATCTGTGATATCCTGCGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGTTTTTCATGGATGCCTTTGGGATTTATTTTTGTCCCAGTCAGCTAGAGTTGCAAATCCAATATaGATAGTGATGATCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVFHGCLWDLFLSQSARVANPI*IVMIPP Trigger: TGGTGGGATCATCACTATCAATATTGGATTTGCAAC...TCTAGCTGACTGGGACAAAAATAAATCCCAAAGGCATCCATGAAAAACTCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTTTCTCATTCATGTCTTGTTCTGTTAGTCTTGCAAAGCACCTGGGGAAAGTTGCAAATCCAATATaGATAGTGATGATCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RCFSFMSCSVSLAKHLGKVANPI*IVMIPP Trigger: TGGTGGGATCATCACTATCAATATTGGATTTGCAAC...TTTCCCCAGGTGCTTTGCAAGACTAACAGAACAAGACATGAATGAGAAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000144618.8 |
||
| CDS GCA 72 bp | GTCTCCTTAGCCAGACAGCTCTTCAGGGCCAGCCTCTaGACGAGGTTCTTCTTGGCTCGGTCCTTCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSLARQLFRASL*TRFFLARSFSE Trigger: TTCTGAGAAGGACCGAGCCAAGAAGAACCTCGTGCAGAGGCTGGCCCTGAAGAGCTGTCTGGCTAAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS CCA 72 bp | GGAGCTCCCTTTTATGTGTGTGATGCGCCTAGGCCATaGGCTTTGGTCTACAAAGGCACCTGGCACGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: GAPFYVCDAPRP*ALVYKGTWHGY Trigger: GTATCCGTGCCAGGTGCCTTTGTAGACCAAAGCCCATGGCCTAGGCGCATCACACACATAAAAGGGAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS CCA 72 bp | GCGCCTAGGCCATGGGCTTTGGTCTACAAAGGCACCTaGCACGGATACAAATGGTTTTGGGTATGTCGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: APRPWALVYKGT*HGYKWFWVCRE Trigger: TTCGCGACATACCCAAAACCATTTGTATCCGTGCCAGGTGCCTTTGTAGACCAAAGCCCATGGCCTAGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS TCA 72 bp | AGAGTCCACATGGTGGAAGGATGGTGGAAGGAGAGCTaGCTCCAGCAGGCCATTTTCAGATGCACTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RVHMVEGWWKES*LQQAIFRCTCV Trigger: CACACAAGTGCATCTGAAAATGGCCTGCTGGAGTCAGCTCTCCTTCCACCATCCTTCCACCATGTGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS CAA 72 bp | CCCTTTTATGTGTGTGATGCGCCTAGGCCATGGGCTTaGGTCTACAAAGGCACCTGGCACGGATACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: PFYVCDAPRPWA*VYKGTWHGYKW Trigger: CCATTTGTATCCGTGCCAGGTGCCTTTGTAGACCAAAGCCCATGGCCTAGGCGCATCACACACATAAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144618.8 |
||
| CDS GCA 72 bp | AGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTaGTTGAGCAATAGAGCCACATCCAAGGACGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: SDDPTSLFSTED*LSNRATSKDEI Trigger: TATCTCGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS GCA 72 bp | AGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTaGTTGAGCAATAGAGCCACATCCAAGGACAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: SDDPTSLFSTED*LSNRATSKDNH Trigger: ATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS CAA 72 bp | GATGATCCCACCAGCCTTTTCTCGACTGAGGACTGCTaGAGCAATAGAGCCACATCCAAGGACGAGATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DDPTSLFSTEDC*SNRATSKDEIK Trigger: TTTTATCTCGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS CAA 90 bp | ATTGATAGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTGCTaGAGCAATAGAGCCACATCCAAGGACGAGATAAAAGTCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: IDSDDPTSLFSTEDC*SNRATSKDEIKVPV Trigger: AACAGGGACTTTTATCTCGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACTATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060917.12 |
||
| CDS CAA 72 bp | AAAGACAATCAGAAGGAGGAACATGGTAGACACCACTaGGTCTACAAAGGCACCTGGCACGGATACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: KDNQKEEHGRHH*VYKGTWHGYKW Trigger: CCATTTGTATCCGTGCCAGGTGCCTTTGTAGACCAAGTGGTGTCTACCATGTTCCTCCTTCTGATTGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 |
||
| CDS CAA 72 bp | GATGATCCCACCAGCCTTTTCTCGACTGAGGACTGCTaGAGCAATAGAGCCACATCCAAGGACAATCATTAT | + |
|
Preference number: 6 (lower is better) Translates to: DDPTSLFSTEDC*SNRATSKDNHY Trigger: ATAATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS CAA 90 bp | ATTGATAGTGATGATCCCACCAGCCTTTTCTCGACTGAGGACTGCTaGAGCAATAGAGCCACATCCAAGGACAATCATTATAAAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IDSDDPTSLFSTEDC*SNRATSKDNHYKGA Trigger: GGCACCTTTATAATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACTATCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS TCA 72 bp | ATGATCCCACCAGCCTTTTCTCGACTGAGGACTGCTTaGGCAATAGAGCCACATCCAAGGACAATCATTATA | + |
|
Preference number: 6 (lower is better) Translates to: MIPPAFSRLRTA*AIEPHPRTIII Trigger: TATAATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGCAGTCCTCAGTCGAGAAAAGGCTGGTGGGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS GCA 72 bp | ACCAAAAGTCGCATAAAGAGCCATCACAACTGCCGTTaGAAATCCAATATTGATAGTGATGATCCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TKSRIKSHHNCR*KSNIDSDDPTS Trigger: GCTGGTGGGATCATCACTATCAATATTGGATTTGCAACGGCAGTTGTGATGGCTCTTTATGCGACTTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||
| CDS GCA 72 bp | AGAGACACCAAAAGTCGCATAAAGAGCCATCACAACTaGCGTTGCAAATCCAATATTGATAGTGATGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: RDTKSRIKSHHN*RCKSNIDSDDP Trigger: GGGATCATCACTATCAATATTGGATTTGCAACGGCAGTTGTGATGGCTCTTTATGCGACTTTTGGTGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060917.12 ENSMUST00000074465.9 ENSMUST00000113570.8 ENSMUST00000144618.8 |
||