Pregenerated sensors for AQP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030762Ensembl transcript IDs: ENSMUST00000033023.10, ENSMUST00000098056.6
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTGCCTGCCTGAGAAGCCAGGCCTAGGTCAGCTGCTGTCATGGTaGCTCCTGTTAGCTCAGGTCCTGCAGGAGATAATGGAATTGTTC | + |
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Preference number: 1 (lower is better) Translates to: ACLPEKPGLGQLLSW*LLLAQVLQEIMELF Trigger: GAACAATTCCATTATCTCCTGCAGGACCTGAGCTAACAGGAGTCACCATGACAGCAGCTGACCTAGGCCTGGCTTCTCAGGCAGGCAGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR GCA 90 bp | AAATGGACAGTGTGCATTCTCCACCTTCTCAGCCCTTCTAATCCCTaGCCTCTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGT | + |
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Preference number: 1 (lower is better) Translates to: KWTVCILHLLSPSNP*PLARKEAYPLFLCG Trigger: ACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGATTAGAAGGGCTGAGAAGGTGGAGAATGCACACTGTCCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR TCA 90 bp | TACAAAGTCAGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTaGAAGACCTTCTGTAACTGTAATCAAGAGAAAAGAGGGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: YKVRLGAEEARSLGS*KTFCNCNQEKRGCG Trigger: TCCACACCCTCTTTTCTCTTGATTACAGTTACAGAAGGTCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR GCA 90 bp | TCCACCTTCTCAGCCCTTCTAATCCCTGCCCTCTCGCAAGAAAAGAGGCCTACCAGCCGCCTGCCTGCCTaGCTGCCTGAGAAGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: STFSALLIPALSQEKRPTSRLPA*LPEKPG Trigger: GCCTGGCTTCTCAGGCAGGCAGGCAGGCAGGCGGCT...GGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGATTAGAAGGGCTGAGAAGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCTATGCGGTCTCTACCTGTCTTTAGGCTGGGCCCCAGGCCCACTCCATGAGAGAGCAGCAGCCGCCTaGCTGCCTGCCTGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLCGLYLSLGWAPGPLHERAAAA*LPACLR Trigger: TCTCAGGCAGGCAGGCAGGCAGGCGGCTGCTGCTCT...CTCATGGAGTGGGCCTGGGGCCCAGCCTAAAGACAGGTAGAGACCGCATAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR TCA 90 bp | GCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGCCGCCTTAGGACAAGCAGCTaGGGACTCCAGGCAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: AQRNSRFPGACSGQSSSRLRTSS*GLQAVG Trigger: TCCCACTGCCTGGAGTCCTCAGCTGCTTGTCCTAAG...GCGGCTGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR GCA 90 bp | GGCTCAGTAGCAAAGTGCTCACCTAGTGTGCATGAATTGGGTTCCAAACCCAACAGCCGCCTGCCTGCCTaGCTGCCTGAGAAGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GSVAKCSPSVHELGSKPNSRLPA*LPEKPG Trigger: GCCTGGCTTCTCAGGCAGGCAGGCAGGCAGGCGGCT...GTTGGGTTTGGAACCCAATTCATGCACACTAGGTGAGCACTTTGCTACTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTACCCTCTTTTTCTATGCGGTCTCTACCTGTCTTTAGGCTGGGCCCCCAGCTGCTGTCATGGTaGCTCCTGTTAGCTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RGLPSFSMRSLPVFRLGPQLLSW*LLLAQV Trigger: GACCTGAGCTAACAGGAGTCACCATGACAGCAGCTG...GGGGCCCAGCCTAAAGACAGGTAGAGACCGCATAGAAAAAGAGGGTAGGCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR CCA 90 bp | CATGAGCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGAGGACTCCAGGCAGTaGGAACGTCGCCAGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: HEHREIPGFQEHAQDRAAEDSRQ*ERRQQF Trigger: GAACTGCTGGCGACGTTCCCACTGCCTGGAGTCCTC...TGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR TCA 90 bp | CATGAGCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCACTTAGGACAAGCAGCTaGGGACTCCAGGCAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: HEHREIPGFQEHAQDRAALRTSS*GLQAVG Trigger: TCCCACTGCCTGGAGTCCTCAGCTGCTTGTCCTAAG...TGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGCTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGGCTCCTGAAAGACCTTCTGTAACTGTAATCAAGAGAAAAGAGGGTGTGGCCTGCCTGCCTGCCTaGGAAGCCAGGCCTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LWAPERPSVTVIKRKEGVACLPA*EARPRS Trigger: TGACCTAGGCCTGGCTTCTCAGGCAGGCAGGCAGGC...CACACCCTCTTTTCTCTTGATTACAGTTACAGAAGGTCTTTCAGGAGCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGCTCCTGAAAGACCTTCTGTAACTGTAATCAAGAGAAAAGAGGGTGTGAGAGCAGCAGCCGCCTaGCTGCCTGCCTGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LWAPERPSVTVIKRKEGVRAAAA*LPACLR Trigger: TCTCAGGCAGGCAGGCAGGCAGGCGGCTGCTGCTCT...CACACCCTCTTTTCTCTTGATTACAGTTACAGAAGGTCTTTCAGGAGCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAAATGGACAGTGTGCATTCTCCACCTTCTCAGCCCTTCTAATCCCTGCCCTCAGCTGCTGTCATGGTaGCTCCTGTTAGCTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: KKWTVCILHLLSPSNPCPQLLSW*LLLAQV Trigger: GACCTGAGCTAACAGGAGTCACCATGACAGCAGCTG...AGGGCAGGGATTAGAAGGGCTGAGAAGGTGGAGAATGCACACTGTCCATTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR TCA 90 bp | ATTACAAAGTCAGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAAAGACCCAGGCCCACTCCATaGGCACAGAGAAATTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ITKSDWELRKQDLWAPERPRPTP*AQRNSR Trigger: CCTGGAATTTCTCTGTGCTCATGGAGTGGGCCTGGG...TCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR CCA 90 bp | TTTATTACAAAGTCAGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAAGAGGACTCCAGGCAGTaGGAACGTCGCCAGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: FITKSDWELRKQDLWAPEEDSRQ*ERRQQF Trigger: GAACTGCTGGCGACGTTCCCACTGCCTGGAGTCCTC...TTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGCTCCTGAAAGACCTTCTGTAACTGTAATCAAGAGAAAAGAGGGTGTGAAGAAATGGACAGTGTaGATTCTCCACCTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LWAPERPSVTVIKRKEGVKKWTV*ILHLLS Trigger: GCTGAGAAGGTGGAGAATGCACACTGTCCATTTCTT...CACACCCTCTTTTCTCTTGATTACAGTTACAGAAGGTCTTTCAGGAGCCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGCAAAGTGCTCACCTAGTGTGCATGAATTGGGTTCCAAACCCAACCTAGTATACCCTCTTTTTCTATaGGGTCTCTACCTGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: VAKCSPSVHELGSKPNLVYPLFL*GLYLSL Trigger: TAAAGACAGGTAGAGACCGCATAGAAAAAGAGGGTA...TACTAGGTTGGGTTTGGAACCCAATTCATGCACACTAGGTGAGCACTTTGCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR GCA 72 bp | GCATGCTCAGGACAGAGCAGCAGCCGCCTGCCTGCCTaGCTGCCTGAGAAGCCAGGCCTAGGTCAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: ACSGQSSSRLPA*LPEKPGLGQLL Trigger: CAGCAGCTGACCTAGGCCTGGCTTCTCAGGCAGGCAGGCAGGCAGGCGGCTGCTGCTCTGTCCTGAGCATGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR TCA 72 bp | CTACCTGTCTTTAGGCTGGGCCCCAGGCCCACTCCATaGGCACAGAGAAATTCCAGGTTTCCAGGAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: LPVFRLGPRPTP*AQRNSRFPGAC Trigger: GCATGCTCCTGGAAACCTGGAATTTCTCTGTGCTCATGGAGTGGGCCTGGGGCCCAGCCTAAAGACAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR TCA 72 bp | CCTGAGAAGCCAGGCCTAGGTCAGCTGCTGTCATGGTaGCTCCTGTTAGCTCAGGTCCTGCAGGAGATAATG | + |
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Preference number: 3 (lower is better) Translates to: PEKPGLGQLLSW*LLLAQVLQEIM Trigger: CATTATCTCCTGCAGGACCTGAGCTAACAGGAGTCACCATGACAGCAGCTGACCTAGGCCTGGCTTCTCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR TCA 72 bp | ATGGAATTGTTCCGTCCTCAACTTAGGACAAGCAGCTaGGGACTCCAGGCAGTGGGAACGTCGCCAGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: MELFRPQLRTSS*GLQAVGTSPAV Trigger: AACTGCTGGCGACGTTCCCACTGCCTGGAGTCCTCAGCTGCTTGTCCTAAGTTGAGGACGGAACAATTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR GCA 72 bp | GTGTGCATTCTCCACCTTCTCAGCCCTTCTAATCCCTaGCCTCTCGCAAGAAAAGAGGCCTACCCTCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: VCILHLLSPSNP*PLARKEAYPLF Trigger: AAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGATTAGAAGGGCTGAGAAGGTGGAGAATGCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR TCA 72 bp | AGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTaGAAGACCTTCTGTAACTGTAATCAAGAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RLGAEEARSLGS*KTFCNCNQEKR Trigger: TCTTTTCTCTTGATTACAGTTACAGAAGGTCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| 3UTR TCA 72 bp | ATGCTAAGCCATTTATTACAAAGTCAGATTGGGAGCTaGGGAAGCAAGATCTTTGGGCTCCTGAAAGACCTT | + |
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Preference number: 3 (lower is better) Translates to: MLSHLLQSQIGS*GSKIFGLLKDL Trigger: AAGGTCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTAATAAATGGCTTAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033023.10 |
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| CDS-3UTR GCA 90 bp | GAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGCCGCCTGCCAGGGCTTCTGCCACCTaGTCCTGCTCCTGGACGATG | + |
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Preference number: 4 (lower is better) Translates to: EKFQVSRSMLRTEQQPPARASAT*SCSWTM Trigger: CATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCT...GGCAGGCGGCTGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | CACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGCCGCCTATCCCCAGGGCTTCTaGCACCTGCTCCTGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HREIPGFQEHAQDRAAAAYPQGF*HLLLLL Trigger: CAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATA...GGCGGCTGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | TTCTCCACCTTCTCAGCCCTTCTAATCCCTGCCCTCTCGCAAGAAAAGAGGCCTGGCCTCCGATCACTGTaGCTGCCAGCGACACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FSTFSALLIPALSQEKRPGLRSL*LPATQQ Trigger: CTGCTGTGTCGCTGGCAGTCACAGTGATCGGAGGCC...AGGCCTCTTTTCTTGCGAGAGGGCAGGGATTAGAAGGGCTGAGAAGGTGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | TCCCTGCCCTCTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGTCTCTAGGCCTCCGATCACTGTaGCTGCCAGCGACACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLPSRKKRGLPSFSMRSLGLRSL*LPATQQ Trigger: CTGCTGTGTCGCTGGCAGTCACAGTGATCGGAGGCC...TAGAGACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CCA 90 bp | TTCTCCACCTTCTCAGCCCTTCTAATCCCTGCCCTCTCGCAAGAAAAGAGGCCTCCTGCTCCTGGACGATaGCAAAGGCTGCCCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: FSTFSALLIPALSQEKRPPAPGR*QRLPQM Trigger: CATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGG...AGGCCTCTTTTCTTGCGAGAGGGCAGGGATTAGAAGGGCTGAGAAGGTGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CCA 90 bp | GGTGTGGAGAGCAGGGGCTCAGTAGCAAAGTGCTCACCTAGTGTGCATGAATTGCCTGCTCCTGGACGATaGCAAAGGCTGCCCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: GVESRGSVAKCSPSVHELPAPGR*QRLPQM Trigger: CATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGG...CAATTCATGCACACTAGGTGAGCACTTTGCTACTGAGCCCCTGCTCTCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | GAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGCCGCCTGCCAGAGATGCTACCACCTaGCAGGATGTCCACAATGAC | + |
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Preference number: 4 (lower is better) Translates to: EKFQVSRSMLRTEQQPPARDATT*QDVHND Trigger: GTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCT...GGCAGGCGGCTGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | GAAGCCAGGCCTAGGTCAGCTGCTGTCATGGTGACTCCTGTTAGCTCAGGTCCTCCAGGATGTCCACAATaGCAGAGAAGCCAATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EARPRSAAVMVTPVSSGPPGCPQ*QRSQWR Trigger: TCTCCATTGGCTTCTCTGTCATTGTGGACATCCTGG...AGGACCTGAGCTAACAGGAGTCACCATGACAGCAGCTGACCTAGGCCTGGCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | TCCCTGCCCTCTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGTCTCTATCTGCCACCTGCTCCTaGTCCTGGACGATGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLPSRKKRGLPSFSMRSLSATCS*SWTMAK Trigger: CTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGA...TAGAGACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | GAAGCCAGGCCTAGGTCAGCTGCTGTCATGGTGACTCCTGTTAGCTCAGGTCCTCCATTGTCTTCTCATTaGCAGCACCCATACACACAG | + |
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Preference number: 4 (lower is better) Translates to: EARPRSAAVMVTPVSSGPPLSSH*QHPYTQ Trigger: CTGTGTGTATGGGTGCTGTCAATGAGAAGACAATGG...AGGACCTGAGCTAACAGGAGTCACCATGACAGCAGCTGACCTAGGCCTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | GCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGCCGCAAAGGCTGCCCCAGATaGATTCCAGAATCTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AQRNSRFPGACSGQSSSRKGCPR*IPESFL Trigger: GAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTT...GCGGCTGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | GATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAAAGACCTTCTGTAACTAGGGCTTCTGCCACCTaGTCCTGCTCCTGGACGATG | + |
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Preference number: 4 (lower is better) Translates to: DWELRKQDLWAPERPSVTRASAT*SCSWTM Trigger: CATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCT...AGTTACAGAAGGTCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | CTCTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGTCTCTACCTGTCTTTATCCCCAGGGCTTCTaGCACCTGCTCCTGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSQEKRPTLFFYAVSTCLYPQGF*HLLLLL Trigger: CAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATA...AAGACAGGTAGAGACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | GATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAAAGACCTTCTGTAACTTCTGCCACCTGCTCCTaGTCCTGGACGATGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: DWELRKQDLWAPERPSVTSATCS*SWTMAK Trigger: CTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGA...AGTTACAGAAGGTCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | GGCTCAGTAGCAAAGTGCTCACCTAGTGTGCATGAATTGGGTTCCAAACCCAACTGCAGGCTCCAGAGATaGTACCACCTGCCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GSVAKCSPSVHELGSKPNCRLQR*YHLPGC Trigger: ACATCCTGGCAGGTGGTAGCATCTCTGGAGCCTGCA...GTTGGGTTTGGAACCCAATTCATGCACACTAGGTGAGCACTTTGCTACTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CCA 90 bp | GCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCAGCCGCCCAGAATCTTTCCTCTaGACTCACCACTTTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: AQRNSRFPGACSGQSSSRPESFL*THHFSQ Trigger: TTGGCTAAAGTGGTGAGTCCAGAGGAAAGATTCTGG...GCGGCTGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | CATGAGCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCACCAGGATGTCCACAATaGCAGAGAAGCCAATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HEHREIPGFQEHAQDRAAPGCPQ*QRSQWR Trigger: TCTCCATTGGCTTCTCTGTCATTGTGGACATCCTGG...TGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | ATCCCTGCCCTCTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGTCTCTAGAGATGCTACCACCTaGCAGGATGTCCACAATGAC | + |
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Preference number: 4 (lower is better) Translates to: IPALSQEKRPTLFFYAVSRDATT*QDVHND Trigger: GTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCT...AGAGACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | ATCCCTGCCCTCTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGTCTCTACAGCATTGTCAGAATaGTCTCTATCCCCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: IPALSQEKRPTLFFYAVSTALSE*SLSPGL Trigger: AAGCCCTGGGGATAGAGATCATTCTGACAATGCTGT...AGAGACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR TCA 90 bp | GGCTCAGTAGCAAAGTGCTCACCTAGTGTGCATGAATTGGGTTCCAAACCCAACACAGCATTGTCAGAATaGTCTCTATCCCCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GSVAKCSPSVHELGSKPNTALSE*SLSPGL Trigger: AAGCCCTGGGGATAGAGATCATTCTGACAATGCTGT...GTTGGGTTTGGAACCCAATTCATGCACACTAGGTGAGCACTTTGCTACTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CCA 90 bp | CATGAGCACAGAGAAATTCCAGGTTTCCAGGAGCATGCTCAGGACAGAGCAGCACCAGAATCTTTCCTCTaGACTCACCACTTTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HEHREIPGFQEHAQDRAAPESFL*THHFSQ Trigger: TTGGCTAAAGTGGTGAGTCCAGAGGAAAGATTCTGG...TGCTGCTCTGTCCTGAGCATGCTCCTGGAAACCTGGAATTTCTCTGTGCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | AGCAGGGGCTCAGTAGCAAAGTGCTCACCTAGTGTGCATGAATTGGGTTCCAAACATGGTTGTACGTATTaGTCATACCAGAACACACGG | + |
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Preference number: 4 (lower is better) Translates to: SRGSVAKCSPSVHELGSKHGCTY*SYQNTR Trigger: CCGTGTGTTCTGGTATGAGCAATACGTACAACCATG...TTTGGAACCCAATTCATGCACACTAGGTGAGCACTTTGCTACTGAGCCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | ATTACAAAGTCAGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAAAGAGACGATGGCAAAGGCTaGCCCAGATGCATTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ITKSDWELRKQDLWAPERDDGKG*PRCIPE Trigger: TTCTGGAATGCATCTGGGGCAGCCTTTGCCATCGTC...TCTTTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CCA 90 bp | CTCGCAAGAAAAGAGGCCTACCCTCTTTTTCTATGCGGTCTCTACCTGTCTTTAGTCCATACTACACATTaGTGTCTGCTCCCCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: LARKEAYPLFLCGLYLSLVHTTH*CLLPRH Trigger: ATGTCTGGGGAGCAGACACCAATGTGTAGTATGGAC...TAAAGACAGGTAGAGACCGCATAGAAAAAGAGGGTAGGCCTCTTTTCTTGCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | CTTTGGGCTCCTGAAAGACCTTCTGTAACTGTAATCAAGAGAAAAGAGGGTGTGAAAGGCTGCCCCAGATaGATTCCAGAATCTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LWAPERPSVTVIKRKEGVKGCPR*IPESFL Trigger: GAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTT...CACACCCTCTTTTCTCTTGATTACAGTTACAGAAGGTCTTTCAGGAGCCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR GCA 90 bp | TTTATTACAAAGTCAGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAACATGGTTGTACGTATTaGTCATACCAGAACACACGG | + |
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Preference number: 4 (lower is better) Translates to: FITKSDWELRKQDLWAPEHGCTY*SYQNTR Trigger: CCGTGTGTTCTGGTATGAGCAATACGTACAACCATG...TTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS TCA 90 bp | CTGATGTTCCCCAAGGTAGCAATGATGAGCCCCAAGGCCAGCCCATaGGCCAAGGCAGGCTGCAGGAGCCCAGTATTCGGACTATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LMFPKVAMMSPKASP*AKAGCRSPVFGLFS Trigger: TGAGAATAGTCCGAATACTGGGCTCCTGCAGCCTGCCTTGGCTCATGGGCTGGCCTTGGGGCTCATCATTGCTACCTTGGGGAACATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 90 bp | TGCCACCTGCTCCTGCTCCTGGACGATGGCAAAGGCTGCCCCAGATaGATTCCAGAATCTTTCCTCTGGACTCACCACTTTAGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: CHLLLLLDDGKGCPR*IPESFLWTHHFSQG Trigger: GCCTTGGCTAAAGTGGTGAGTCCAGAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 90 bp | AACAGCATTGTCAGAATGATCTCTATCCCCAGGGCTTCTGCCACCTaGTCCTGCTCCTGGACGATGGCAAAGGCTGCCCCAGATGCATTC | + |
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Preference number: 5 (lower is better) Translates to: NSIVRMISIPRASAT*SCSWTMAKAAPDAF Trigger: GAATGCATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATAGAGATCATTCTGACAATGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 90 bp | CAATACCAACAGCATTGTCAGAATGATCTCTATCCCCAGGGCTTCTaGCACCTGCTCCTGCTCCTGGACGATGGCAAAGGCTGCCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QYQQHCQNDLYPQGF*HLLLLLDDGKGCPR Trigger: TCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATAGAGATCATTCTGACAATGCTGTTGGTATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 90 bp | AAAGGCACGAGCAGGGTTCATGCAGGCTCCAGAGATGCTACCACCTaGCAGGATGTCCACAATGACAGAGAAGCCAATGGAGAATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: KGTSRVHAGSRDATT*QDVHNDREANGEWG Trigger: GCCCCATTCTCCATTGGCTTCTCTGTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCTGGAGCCTGCATGAACCCTGCTCGTGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 90 bp | ATTGTCAGAATGATCTCTATCCCCAGGGCTTCTGCCACCTGCTCCTaGTCCTGGACGATGGCAAAGGCTGCCCCAGATGCATTCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: IVRMISIPRASATCS*SWTMAKAAPDAFQN Trigger: ATTCTGGAATGCATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATAGAGATCATTCTGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CCA 90 bp | GACGATGGCAAAGGCTGCCCCAGATGCATTCCAGAATCTTTCCTCTaGACTCACCACTTTAGCCAAGGCAGCCCCAATCAGCCCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: DDGKGCPRCIPESFL*THHFSQGSPNQPSK Trigger: TTTGGAGGGCTGATTGGGGCTGCCTTGGCTAAAGTGGTGAGTCCAGAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTTGCCATCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTACCCTCTTTTTCTATGCGGTCTCTACCTGTCTTTAGGCTGGGCCCCATTAGCAGCATGGTCTaGAGGCCTCCGATCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: RGLPSFSMRSLPVFRLGPISSMV*RPPITV Trigger: CACAGTGATCGGAGGCCTCAAGACCATGCTGCTAAT...GGGGCCCAGCCTAAAGACAGGTAGAGACCGCATAGAAAAAGAGGGTAGGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS TCA 90 bp | TCATGCAGGCTCCAGAGATGCTACCACCTGCCAGGATGTCCACAATaGCAGAGAAGCCAATGGAGAATGGGGCTAAAGGGCCCATTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCRLQRCYHLPGCPQ*QRSQWRMGLKGPLS Trigger: AGACAATGGGCCCTTTAGCCCCATTCTCCATTGGCTTCTCTGTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCTGGAGCCTGCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CAA 90 bp | TTTCTATGCGGTCTCTACCTGTCTTTAGGCTGGGCCCCAGGCCCACTCCATGAGCCCATTGTCTTCTCATaGACAGCACCCATACACACA | + |
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Preference number: 5 (lower is better) Translates to: FLCGLYLSLGWAPGPLHEPIVFS*TAPIHT Trigger: TGTGTGTATGGGTGCTGTCAATGAGAAGACAATGGG...CTCATGGAGTGGGCCTGGGGCCCAGCCTAAAGACAGGTAGAGACCGCATAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CAA 90 bp | GGTGTGGAGAGCAGGGGCTCAGTAGCAAAGTGCTCACCTAGTGTGCATGAATTGGGTCCATACTACACATaGGTGTCTGCTCCCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: GVESRGSVAKCSPSVHELGPYYT*VSAPQT Trigger: TGTCTGGGGAGCAGACACCAATGTGTAGTATGGACC...CAATTCATGCACACTAGGTGAGCACTTTGCTACTGAGCCCCTGCTCTCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098056.6 |
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| CDS-3UTR CAA 90 bp | TCCACCTTCTCAGCCCTTCTAATCCCTGCCCTCTCGCAAGAAAAGAGGCCTACCCCCATTGTCTTCTCATaGACAGCACCCATACACACA | + |
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Preference number: 5 (lower is better) Translates to: STFSALLIPALSQEKRPTPIVFS*TAPIHT Trigger: TGTGTGTATGGGTGCTGTCAATGAGAAGACAATGGG...GGTAGGCCTCTTTTCTTGCGAGAGGGCAGGGATTAGAAGGGCTGAGAAGGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CCA 90 bp | TCCGATGAAGATGAAGAGAGCGGAGCCCACAAGTTCCACTATACATaGTTGTACGTATTGCTCATACCAGAACACACGGCATCTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SDEDEESGAHKFHYT*LYVLLIPEHTASAS Trigger: GCTGGCAGATGCCGTGTGTTCTGGTATGAGCAATACGTACAACCATGTATAGTGGAACTTGTGGGCTCCGCTCTCTTCATCTTCATCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS-3UTR CAA 90 bp | TTTATTACAAAGTCAGATTGGGAGCTGAGGAAGCAAGATCTTTGGGCTCCTGAAATTAGCAGCATGGTCTaGAGGCCTCCGATCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: FITKSDWELRKQDLWAPEISSMV*RPPITV Trigger: CACAGTGATCGGAGGCCTCAAGACCATGCTGCTAAT...TTCAGGAGCCCAAAGATCTTGCTTCCTCAGCTCCCAATCTGACTTTGTAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 72 bp | ATGATCTCTATCCCCAGGGCTTCTGCCACCTGCTCCTaGTCCTGGACGATGGCAAAGGCTGCCCCAGATGCA | + |
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Preference number: 6 (lower is better) Translates to: MISIPRASATCS*SWTMAKAAPDA Trigger: TGCATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATAGAGATCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 72 bp | CCATCACAGCAGGTCCAAAGGCACGAGCAGGGTTCATaGAGGCTCCAGAGATGCTACCACCTGCCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: PSQQVQRHEQGS*RLQRCYHLPGC Trigger: ACATCCTGGCAGGTGGTAGCATCTCTGGAGCCTGCATGAACCCTGCTCGTGCCTTTGGACCTGCTGTGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CAA 90 bp | GTCTTGAGGCCTCCGATCACTGTGACTGCCAGCGACACAGCAGGGTaGAAGTGTCCACCGCTGATGTTCCCCAAGGTAGCAATGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: VLRPPITVTASDTAG*KCPPLMFPKVAMMS Trigger: GCTCATCATTGCTACCTTGGGGAACATCAGCGGTGGACACTTCAACCCTGCTGTGTCGCTGGCAGTCACAGTGATCGGAGGCCTCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 72 bp | TGCCACCTGCTCCTGCTCCTGGACGATGGCAAAGGCTaGCCCAGATGCATTCCAGAATCTTTCCTCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: CHLLLLLDDGKG*PRCIPESFLWT Trigger: AGTCCAGAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS TCA 72 bp | CTCCAGAGATGCTACCACCTGCCAGGATGTCCACAATaGCAGAGAAGCCAATGGAGAATGGGGCTAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LQRCYHLPGCPQ*QRSQWRMGLKG Trigger: GCCCTTTAGCCCCATTCTCCATTGGCTTCTCTGTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 72 bp | CTCCTGCTCCTGGACGATGGCAAAGGCTGCCCCAGATaGATTCCAGAATCTTTCCTCTGGACTCACCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LLLLDDGKGCPR*IPESFLWTHHF Trigger: AAAGTGGTGAGTCCAGAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS GCA 72 bp | AGCAGGGTTCATGCAGGCTCCAGAGATGCTACCACCTaGCAGGATGTCCACAATGACAGAGAAGCCAATGGA | + |
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Preference number: 6 (lower is better) Translates to: SRVHAGSRDATT*QDVHNDREANG Trigger: TCCATTGGCTTCTCTGTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCTGGAGCCTGCATGAACCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CCA 72 bp | AAAGGCTGCCCCAGATGCATTCCAGAATCTTTCCTCTaGACTCACCACTTTAGCCAAGGCAGCCCCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: KGCPRCIPESFL*THHFSQGSPNQ Trigger: CTGATTGGGGCTGCCTTGGCTAAAGTGGTGAGTCCAGAGGAAAGATTCTGGAATGCATCTGGGGCAGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS TCA 72 bp | CCATACACACAGCCAATACCAACAGCATTGTCAGAATaGTCTCTATCCCCAGGGCTTCTGCCACCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PYTQPIPTALSE*SLSPGLLPPAP Trigger: AGGAGCAGGTGGCAGAAGCCCTGGGGATAGAGATCATTCTGACAATGCTGTTGGTATTGGCTGTGTGTATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CAA 90 bp | GAGAAGCCAATGGAGAATGGGGCTAAAGGGCCCATTGTCTTCTCATaGACAGCACCCATACACACAGCCAATACCAACAGCATTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: EKPMENGAKGPIVFS*TAPIHTANTNSIVR Trigger: TCTGACAATGCTGTTGGTATTGGCTGTGTGTATGGGTGCTGTCAATGAGAAGACAATGGGCCCTTTAGCCCCATTCTCCATTGGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CCA 72 bp | GATGAAGAGAGCGGAGCCCACAAGTTCCACTATACATaGTTGTACGTATTGCTCATACCAGAACACACGGCA | + |
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Preference number: 6 (lower is better) Translates to: DEESGAHKFHYT*LYVLLIPEHTA Trigger: TGCCGTGTGTTCTGGTATGAGCAATACGTACAACCATGTATAGTGGAACTTGTGGGCTCCGCTCTCTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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| CDS CAA 72 bp | GAAGAGAGCGGAGCCCACAAGTTCCACTATACATGGTaGTACGTATTGCTCATACCAGAACACACGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: EESGAHKFHYTW*YVLLIPEHTAS Trigger: AGATGCCGTGTGTTCTGGTATGAGCAATACGTACAACCATGTATAGTGGAACTTGTGGGCTCCGCTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033023.10 ENSMUST00000098056.6 |
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