Pregenerated sensors for AQP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028427Ensembl transcript IDs: ENSMUST00000030136.13, ENSMUST00000054945.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCCTTGGGTTTGATCCCAGCACCACATATAAACTGGGAATGGTaGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: KALGLIPAPHINWEW*CAPVIPELRRWRPD Trigger: GTCTGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCATTCCCAGTTTATATGTGGTGCTGGGATCAAACCCAAGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR CCA 90 bp | CACAAGGCCTTGGGTTTGATCCCAGCACCACATATAAACTGGGAATaGTGGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: HKALGLIPAPHINWE*WCAPVIPELRRWRP Trigger: TGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCATTCCCAGTTTATATGTGGTGCTGGGATCAAACCCAAGGCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR TCA 90 bp | CCCTTGACACCCCACCTCCTAGAACTGGAAAGAGCTGGAGTCTTCTaGCCCTATGCTCTAGTCCTCAGAAAAGAGCCCAGAATCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLTPHLLELERAGVF*PYALVLRKEPRITL Trigger: CAGGGTGATTCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCTCTTTCCAGTTCTAGGAGGTGGGGTGTCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR GCA 90 bp | GCCTTGGGTTTGATCCCAGCACCACATATAAACTGGGAATGGTGGTaGGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCAGACAAT | + |
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Preference number: 1 (lower is better) Translates to: ALGLIPAPHINWEWW*APVIPELRRWRPDN Trigger: ATTGTCTGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCATTCCCAGTTTATATGTGGTGCTGGGATCAAACCCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR CCA 90 bp | CAGAAAAACCTAGGAGGGAGTTCAGCTGCAGGAGATCCCAAGGAGTaGGGGACCGCTGATAGGTGGTGTGCTTTATTGCAGTACGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: QKNLGGSSAAGDPKE*GTADRWCALLQYGC Trigger: ACAACCGTACTGCAATAAAGCACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCCTCCTAGGTTTTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR CCA 90 bp | AGTTCAGCTGCAGGAGATCCCAAGGAGTGGGGGACCGCTGATAGGTaGTGTGCTTTATTGCAGTACGGTTGTGGTCAAAGAGAAGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: SSAAGDPKEWGTADR*CALLQYGCGQREAL Trigger: TAGAGCTTCTCTTTGACCACAACCGTACTGCAATAAAGCACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR CCA 90 bp | AGCATACACAAGGCCTTGGGTTTGATCCCAGCACCACATATAAACTaGGAATGGTGGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SIHKALGLIPAPHIN*EWWCAPVIPELRRW Trigger: CCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCATTCCCAGTTTATATGTGGTGCTGGGATCAAACCCAAGGCCTTGTGTATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR GCA 90 bp | ACCCCACCTCCTAGAACTGGAAAGAGCTGGAGTCTTCTGACCCTATaGTCTAGTCCTCAGAAAAGAGCCCAGAATCACCCTGGAATATGC | + |
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Preference number: 1 (lower is better) Translates to: TPPPRTGKSWSLLTL*SSPQKRAQNHPGIC Trigger: GCATATTCCAGGGTGATTCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCTCTTTCCAGTTCTAGGAGGTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCAGACAATCCAAAAGACCCCCAAATCTaGTCTCCCATCAGCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: WWCAPVIPELRRWRPDNPKDPQI*SPISYL Trigger: GAGGTAGCTGATGGGAGATCAGATTTGGGGGTCTTT...TGGATTGTCTGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCCTTGGGTTTGATCCCAGCACCACATATAAACTGGGAATGGTGGTGCGCAGGAGGGAGTTCAGCTaGAGGAGATCCCAAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: QGLGFDPSTTYKLGMVVRRREFS*RRSQGV Trigger: CACTCCTTGGGATCTCCTGCAGCTGAACTCCCTCCT...GCGCACCACCATTCCCAGTTTATATGTGGTGCTGGGATCAAACCCAAGGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCAGACAATCCACGACAAGTACCAGGCTaGAATAACTCAGAAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: WWCAPVIPELRRWRPDNPRQVPG*NNSEAP Trigger: GGGAGCTTCTGAGTTATTCCAGCCTGGTACTTGTCG...TGGATTGTCTGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATCCAGAAAACCGAGGAGGGAGTTCAGCTaGAGGAGATCCCAAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: KTRGREKPGDPVLLSRKPRREFS*RRSQGV Trigger: CACTCCTTGGGATCTCCTGCAGCTGAACTCCCTCCT...CGGTTTTCTGGATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCTTGGGTTTGATCCCAGCACCACATATAAACTGGGAATGGTGGTGCGCAGAACTGGAAAGAGCTaGAGTCTTCTGACCCTATGC | + |
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Preference number: 2 (lower is better) Translates to: QGLGFDPSTTYKLGMVVRRTGKS*SLLTLC Trigger: GCATAGGGTCAGAAGACTCCAGCTCTTTCCAGTTCT...GCGCACCACCATTCCCAGTTTATATGTGGTGCTGGGATCAAACCCAAGGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACATACTGATCGACAAGTACCAGGCTaGAATAACTCAGAAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PISYLRSFSHCSPNTHTDRQVPG*NNSEAP Trigger: GGGAGCTTCTGAGTTATTCCAGCCTGGTACTTGTCG...ATCAGTATGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR CCA 72 bp | CTAGGAGGGAGTTCAGCTGCAGGAGATCCCAAGGAGTaGGGGACCGCTGATAGGTGGTGTGCTTTATTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LGGSSAAGDPKE*GTADRWCALLQ Trigger: CTGCAATAAAGCACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCCTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR TCA 72 bp | CCCCACCTCCTAGAACTGGAAAGAGCTGGAGTCTTCTaGCCCTATGCTCTAGTCCTCAGAAAAGAGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PHLLELERAGVF*PYALVLRKEPR Trigger: TCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCTCTTTCCAGTTCTAGGAGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR CCA 72 bp | CCCCTTGACACCCCACCTCCTAGAACTGGAAAGAGCTaGAGTCTTCTGACCCTATGCTCTAGTCCTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PLDTPPPRTGKS*SLLTLCSSPQK Trigger: TTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCTCTTTCCAGTTCTAGGAGGTGGGGTGTCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR-3UTR CAA 90 bp | AAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATCCAGAAAACCGAGTAGACATTCCCCCTaGACACCCCACCTCCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: KTRGREKPGDPVLLSRKPSRHSP*TPHLLE Trigger: TTCTAGGAGGTGGGGTGTCAAGGGGGAATGTCTACT...CGGTTTTCTGGATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| 3UTR GCA 72 bp | GAAAGAGGCAAGAAGATCACAAGTTCAAGGCCAGCCTaGTCTCCACGACAAGTACCAGGCTGGAATAACTCA | + |
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Preference number: 3 (lower is better) Translates to: ERGKKITSSRPA*SPRQVPGWNNS Trigger: TGAGTTATTCCAGCCTGGTACTTGTCGTGGAGAGCAGGCTGGCCTTGAACTTGTGATCTTCTTGCCTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTATATCACTCACCCTGAGCCCCCAAAGTAGACATTCCCCCTTGACACCCTGTGGGCCCCAGAGATaGCGCCTGCTACATGGACTC | + |
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Preference number: 4 (lower is better) Translates to: PFISLTLSPQSRHSPLTPCGPQR*RLLHGL Trigger: GAGTCCATGTAGCAGGCGGCATCTCTGGGGCCCACA...GGGTGTCAAGGGGGAATGTCTACTTTGGGGGCTCAGGGTGAGTGATATAAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | GGGAGTTCAGCTGCAGGAGATCCCAAGGAGTGGGGGACCGCTGATAGGTGGTGTTGTTTGCAGTGGCCTTaGAACCTGTCACCAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: GSSAAGDPKEWGTADRWCCLQWP*NLSPTG Trigger: ACCTGTTGGTGACAGGTTCCAAGGCCACTGCAAACA...ACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | CCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACATACTGATTGTGGGCCCCAGAGATaGCGCCTGCTACATGGACTC | + |
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Preference number: 4 (lower is better) Translates to: PISYLRSFSHCSPNTHTDCGPQR*RLLHGL Trigger: GAGTCCATGTAGCAGGCGGCATCTCTGGGGCCCACA...ATCAGTATGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCAGACAATCCAGTAGCACTGATTGTATaGTCTCCAGCACAGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: WWCAPVIPELRRWRPDNPVALIV*SPAQTW Trigger: CCAGGTCTGTGCTGGAGACCATACAATCAGTGCTAC...TGGATTGTCTGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | AGGCAAGAAGATCACAAGTTCAAGGCCAGCCTGCTCTCCACGACAAGTACCAGGGGTCACGGGATGGGTTaGTTGCATATCCGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RQEDHKFKASLLSTTSTRGHGMG*LHIRSS Trigger: TGAACTCCGGATATGCAATCAACCCATCCCGTGACC...CCTGGTACTTGTCGTGGAGAGCAGGCTGGCCTTGAACTTGTGATCTTCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | CTGATCTCCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACAGGTCACGGGATGGGTTaGTTGCATATCCGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LISHQLPPVFFSLFPQHTGHGMG*LHIRSS Trigger: TGAACTCCGGATATGCAATCAACCCATCCCGTGACC...TGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGGAGATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTATATCACTCACCCTGAGCCCCCAAAGTAGACATTCCCCCTTGACACCCGGTACTCAGGAACTCTaGCAGAAACTCTCGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: PFISLTLSPQSRHSPLTPGTQEL*QKLSHH Trigger: ATGGTGCGAGAGTTTCTGGCAGAGTTCCTGAGTACC...GGGTGTCAAGGGGGAATGTCTACTTTGGGGGCTCAGGGTGAGTGATATAAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | CTGATCTCCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACAGGTACTCAGGAACTCTaGCAGAAACTCTCGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LISHQLPPVFFSLFPQHTGTQEL*QKLSHH Trigger: ATGGTGCGAGAGTTTCTGGCAGAGTTCCTGAGTACC...TGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGGAGATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | CTGATCTCCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACAGAGGATCCTGTGGTATaGTGGGGTGAATTAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: LISHQLPPVFFSLFPQHTEDPVV*WGELNP Trigger: TGGGTTTAATTCACCCCAGCATACCACAGGATCCTC...TGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGGAGATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | TGGTGGTGCGCACCTGTAATCCCAGAACTCAGGAGGTGGAGGCCAGACAATCCATACCTTCTGGTCTCTTaGTGTAAAATTCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: WWCAPVIPELRRWRPDNPYLLVS*CKILQS Trigger: AGACTGGAGAATTTTACAGCAAGAGACCAGAAGGTA...TGGATTGTCTGGCCTCCACCTCCTGAGTTCTGGGATTACAGGTGCGCACCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGAGTCTTCTGACCCTATGCTCTAGTCCTCAGAAAAGAGCCCAGAATCACTGTTTGCAGTGGCCTTaGAACCTGTCACCAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SWSLLTLCSSPQKRAQNHCLQWP*NLSPTG Trigger: ACCTGTTGGTGACAGGTTCCAAGGCCACTGCAAACA...GTGATTCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | AAAGAGGCAAGAAGATCACAAGTTCAAGGCCAGCCTGCTCTCCACGACAAGTACAAATTCTCCAGTCTCTaGGGATCCTGTGGTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: KEARRSQVQGQPALHDKYKFSSL*GSCGML Trigger: CAGCATACCACAGGATCCTCAGAGACTGGAGAATTT...GTACTTGTCGTGGAGAGCAGGCTGGCCTTGAACTTGTGATCTTCTTGCCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | CCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACATACTGATGAGGATCCTGTGGTATaGTGGGGTGAATTAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: PISYLRSFSHCSPNTHTDEDPVV*WGELNP Trigger: TGGGTTTAATTCACCCCAGCATACCACAGGATCCTC...ATCAGTATGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | TTCTCTGGCTCAAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATAAATTCTCCAGTCTCTaGGGATCCTGTGGTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSGSKLEEGRSQEILYSYKFSSL*GSCGML Trigger: CAGCATACCACAGGATCCTCAGAGACTGGAGAATTT...ATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTTGAGCCAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGAGTCTTCTGACCCTATGCTCTAGTCCTCAGAAAAGAGCCCAGAATCACAGCTGCATTCTTGTATaGTGCAGTTACCTTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SWSLLTLCSSPQKRAQNHSCILV*CSYLLV Trigger: GACCAGAAGGTAACTGCATCATACAAGAATGCAGCT...GTGATTCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | ACTGATGCACGAAAGCCCTTTATATCACTCACCCTGAGCCCCCAAAGTAGACATGGTGGCAAAAATGTTTaGAGTGGCCTTGGAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: TDARKPFISLTLSPQSRHGGKNV*SGLGTC Trigger: ACAGGTTCCAAGGCCACTGCAAACATTTTTGCCACC...ATGTCTACTTTGGGGGCTCAGGGTGAGTGATATAAAGGGCTTTCGTGCATCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | ATCCCAAGGAGTGGGGGACCGCTGATAGGTGGTGTGCTTTATTGCAGTACGGTTAGAGCCACTTATGTTTaGAGAAGCTGCATTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: IPRSGGPLIGGVLYCSTVRATYV*RSCILV Trigger: TACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCT...AACCGTACTGCAATAAAGCACACCACCTATCAGCGGTCCCCCACTCCTTGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | GAGTGGGGGACCGCTGATAGGTGGTGTGCTTTATTGCAGTACGGTTGTGGTCAAGATGCAGTTACCTTCTaGTCTCTTGCTGTAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: EWGTADRWCALLQYGCGQDAVTF*SLAVKF Trigger: GAATTTTACAGCAAGAGACCAGAAGGTAACTGCATC...TTGACCACAACCGTACTGCAATAAAGCACACCACCTATCAGCGGTCCCCCACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | TTCTCTGGCTCAAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATAGCTGCATTCTTGTATaGTGCAGTTACCTTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FSGSKLEEGRSQEILYSYSCILV*CSYLLV Trigger: GACCAGAAGGTAACTGCATCATACAAGAATGCAGCT...ATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTTGAGCCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | CTGATCTCCCATCAGCTACCTCCGGTCTTTTTCTCACTGTTCCCCCAACACACAATTCAGGAAGATAGGTaGCAAAAATGTTTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LISHQLPPVFFSLFPQHTIQEDR*QKCLQW Trigger: CCACTGCAAACATTTTTGCCACCTATCTTCCTGAAT...TGTGTGTTGGGGGAACAGTGAGAAAAAGACCGGAGGTAGCTGATGGGAGATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | AGCTGGAGTCTTCTGACCCTATGCTCTAGTCCTCAGAAAAGAGCCCAGAATCACTACCTTCTGGTCTCTTaGTGTAAAATTCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SWSLLTLCSSPQKRAQNHYLLVS*CKILQS Trigger: AGACTGGAGAATTTTACAGCAAGAGACCAGAAGGTA...GTGATTCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR GCA 90 bp | TTCTCTGGCTCAAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATAGAGCCACTTATGTTTaGAGAAGCTGCATTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: FSGSKLEEGRSQEILYSYRATYV*RSCILV Trigger: TACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCT...ATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTTGAGCCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTGGCTCAAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATATTCAGGAAGATAGGTaGCAAAAATGTTTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSGSKLEEGRSQEILYSYIQEDR*QKCLQW Trigger: CCACTGCAAACATTTTTGCCACCTATCTTCCTGAAT...ATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTTGAGCCAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTGGCTCAAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATGATGCAGTTACCTTCTaGTCTCTTGCTGTAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: FSGSKLEEGRSQEILYSYDAVTF*SLAVKF Trigger: GAATTTTACAGCAAGAGACCAGAAGGTAACTGCATC...ATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTTGAGCCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGACAATCCAGAGTTCATGGCTAAACTTAGTTATATAAGAGTTCCAGTCGGCCAAACACCATCATaGCATAGGTACTCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: RPDNPEFMAKLSYIRVPVGQTPS*HRYSGT Trigger: AGTTCCTGAGTACCTATGTCATGATGGTGTTTGGCC...GACTGGAACTCTTATATAACTAAGTTTAGCCATGAACTCTGGATTGTCTGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCAGCTGCAGGAGATCCCAAGGAGTGGGGGACCGCTGATAGGTGGTGTATGTTTGCAGTGGCCTaGGAACCTGTCACCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: GSSAAGDPKEWGTADRWCMFAVA*EPVTNR Trigger: CCTGTTGGTGACAGGTTCCAAGGCCACTGCAAACAT...ACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCAGCTGCAGGAGATCCCAAGGAGTGGGGGACCGCTGATAGGTGGTGTAGGTGGCAAAAATGTTaGCAGTGGCCTTGGAACCTG | + |
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Preference number: 5 (lower is better) Translates to: GSSAAGDPKEWGTADRWCRWQKC*QWPWNL Trigger: CAGGTTCCAAGGCCACTGCAAACATTTTTGCCACCT...ACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCAGCTGCAGGAGATCCCAAGGAGTGGGGGACCGCTGATAGGTGGTGTGCAGAAGCTGCATTCTaGTATGATGCAGTTACCTTC | + |
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Preference number: 5 (lower is better) Translates to: GSSAAGDPKEWGTADRWCAEAAF*YDAVTF Trigger: GAAGGTAACTGCATCATACAAGAATGCAGCTTCTGC...ACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCAGCTGCAGGAGATCCCAAGGAGTGGGGGACCGCTGATAGGTGGTGTCAGAGCCACTTATGTTaGCAGAAGCTGCATTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSSAAGDPKEWGTADRWCQSHLC*QKLHSC Trigger: ACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCTG...ACACCACCTATCAGCGGTCCCCCACTCCTTGGGATCTCCTGCAGCTGAACTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | AGCTGGAGTCTTCTGACCCTATGCTCTAGTCCTCAGAAAAGAGCCCAGAATCACCGGCCTAGTGCACAATaGGTGAAAGTCACTGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SWSLLTLCSSPQKRAQNHRPSAQ*VKVTAA Trigger: TGCCGCAGTGACTTTCACCAATTGTGCACTAGGCCG...GTGATTCTGGGCTCTTTTCTGAGGACTAGAGCATAGGGTCAGAAGACTCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTGGCTCAAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATCGGCCTAGTGCACAATaGGTGAAAGTCACTGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: FSGSKLEEGRSQEILYSYRPSAQ*VKVTAA Trigger: TGCCGCAGTGACTTTCACCAATTGTGCACTAGGCCG...ATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTTGAGCCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | CCCTTTATATCACTCACCCTGAGCCCCCAAAGTAGACATTCCCCCTTGACACCCCAGAGCCACTTATGTTaGCAGAAGCTGCATTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: PFISLTLSPQSRHSPLTPQSHLC*QKLHSC Trigger: ACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCTG...GGGTGTCAAGGGGGAATGTCTACTTTGGGGGCTCAGGGTGAGTGATATAAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | AAAACTAGAGGAAGGGAGAAGCCAGGAGATCCTGTACTCCTATCCAGAAAACCGGCAGAAGCTGCATTCTaGTATGATGCAGTTACCTTC | + |
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Preference number: 5 (lower is better) Translates to: KTRGREKPGDPVLLSRKPAEAAF*YDAVTF Trigger: GAAGGTAACTGCATCATACAAGAATGCAGCTTCTGC...CGGTTTTCTGGATAGGAGTACAGGATCTCCTGGCTTCTCCCTTCCTCTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGACAATCCAGAGTTCATGGCTAAACTTAGTTATATAAGAGTTCCAGTCATGTTTGCAGTGGCCTaGGAACCTGTCACCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: RPDNPEFMAKLSYIRVPVMFAVA*EPVTNR Trigger: CCTGTTGGTGACAGGTTCCAAGGCCACTGCAAACAT...GACTGGAACTCTTATATAACTAAGTTTAGCCATGAACTCTGGATTGTCTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS CAA 72 bp | GGCACAGAGCCACTTATGTTTGCAGAAGCTGCATTCTaGTATGATGCAGTTACCTTCTGGTCTCTTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GTEPLMFAEAAF*YDAVTFWSLAV Trigger: TACAGCAAGAGACCAGAAGGTAACTGCATCATACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCTGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS CAA 90 bp | TGCTCTAGAGGCACAGAGCCACTTATGTTTGCAGAAGCTGCATTCTaGTATGATGCAGTTACCTTCTGGTCTCTTGCTGTAAAATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSRGTEPLMFAEAAF*YDAVTFWSLAVKFS Trigger: GGAGAATTTTACAGCAAGAGACCAGAAGGTAACTGCATCATACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCTGTGCCTCTAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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| CDS TCA 72 bp | AGAGCCACTTATGTTTGCAGAAGCTGCATTCTTGTATaGTGCAGTTACCTTCTGGTCTCTTGCTGTAAAATT | + |
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Preference number: 6 (lower is better) Translates to: RATYVCRSCILV*CSYLLVSCCKI Trigger: AATTTTACAGCAAGAGACCAGAAGGTAACTGCATCATACAAGAATGCAGCTTCTGCAAACATAAGTGGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030136.13 ENSMUST00000054945.8 |
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