Pregenerated sensors for AQP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043144Ensembl transcript IDs: ENSMUST00000023754.6, ENSMUST00000230075.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCAATTCCCCTTTCTCCAAGACAGGGATCCAGCGGCCCAGGATaGCCACTGGGGTCCTGCTGTGTGGTTTCTGCCTCCCTGTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: DPIPLSPRQGSSGPG*PLGSCCVVSASLCS Trigger: AGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTCTTGGAGAAAGGGGAATTGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 90 bp | TTAGAGGCTTCTGGCCCAGGGTATAGACCGAGTGTGGCATGGGGGTaGGGTGGGGACGTGGGCTTCCTCTGTATCACCTTGTCCCAGGTA | + |
|
Preference number: 1 (lower is better) Translates to: LEASGPGYRPSVAWG*GGDVGFLCITLSQV Trigger: TACCTGGGACAAGGTGATACAGAGGAAGCCCACGTCCCCACCCCACCCCCATGCCACACTCGGTCTATACCCTGGGCCAGAAGCCTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 90 bp | CGTGGTGGTATCCCTAAGTCCCGTCTATTTCACAGGCCAAGCGGATaGGGGTGGAGGGGCTGGGAGGCATTGGGAATGGAAGGTCAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: RGGIPKSRLFHRPSG*GWRGWEALGMEGQP Trigger: AGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGTGAAATAGACGGGACTTAGGGATACCACCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR CCA 90 bp | GACAGGGATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTGTaGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: DRDPAAQDAHWGPAV*FLPPCALAVKKQKR Trigger: CCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR GCA 90 bp | ATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTGTGGTTTCTaGCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGGGTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: IQRPRMPTGVLLCGF*LPVLLPLRNRKGSG Trigger: TCCTGACCCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 90 bp | ACAGGCCAAGCGGATGGGGGTGGAGGGGCTGGGAGGCATTGGGAATaGAAGGTCAGCCTGCACAATGTATGTCAAGAGAGGAAACGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: TGQADGGGGAGRHWE*KVSLHNVCQERKRG Trigger: TCCACGTTTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR CCA 90 bp | TATTTCACAGGCCAAGCGGATGGGGGTGGAGGGGCTGGGAGGCATTaGGAATGGAAGGTCAGCCTGCACAATGTATGTCAAGAGAGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: YFTGQADGGGGAGRH*EWKVSLHNVCQERK Trigger: TTTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGTGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR GCA 90 bp | ATGGGGGTGGAGGGGCTGGGAGGCATTGGGAATGGAAGGTCAGCCTaGACAATGTATGTCAAGAGAGGAAACGTGGAAAGGAAACAACTG | + |
|
Preference number: 1 (lower is better) Translates to: MGVEGLGGIGNGRSA*TMYVKRGNVERKQL Trigger: CAGTTGTTTCCTTTCCACGTTTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR CCA 90 bp | TGGGCTCTGAAGCTCCTTCATCAGAGTCCAAGCAGAATGGATATTTaGGACCCAATTCCCCTTTCTCCAAGACAGGGATCCAGCGGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: WALKLLHQSPSRMDI*DPIPLSPRQGSSGP Trigger: TGGGCCGCTGGATCCCTGTCTTGGAGAAAGGGGAATTGGGTCCCAAATATCCATTCTGCTTGGACTCTGATGAAGGAGCTTCAGAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR TCA 90 bp | CTCAGGCAATCCCTAAAACTGGTATTGCCCCATCTTAGTGGGCTCTaGAGCTCCTTCATCAGAGTCCAAGCAGAATGGATATTTGGGACC | + |
|
Preference number: 1 (lower is better) Translates to: LRQSLKLVLPHLSGL*SSFIRVQAEWIFGT Trigger: GGTCCCAAATATCCATTCTGCTTGGACTCTGATGAAGGAGCTTCAGAGCCCACTAAGATGGGGCAATACCAGTTTTAGGGATTGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 90 bp | GGAATGGAAGGTCAGCCTGCACAATGTATGTCAAGAGAGGAAACGTaGAAAGGAAACAACTGTTTGCTTATGGACAGAGATTGGTTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: GMEGQPAQCMSREET*KGNNCLLMDRDWFL Trigger: TAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCCTTTCCACGTTTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR TCA 90 bp | TGGAAAATTAACTGGATGGATTTACCTCCAGATTCTTTCTGTCTATaGATGCAGAAGCTGGTCGTGGTGGTATCCCTAAGTCCCGTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: WKINWMDLPPDSFCL*MQKLVVVVSLSPVY Trigger: ATAGACGGGACTTAGGGATACCACCACGACCAGCTTCTGCATTCATAGACAGAAAGAATCTGGAGGTAAATCCATCCAGTTAATTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTCTCCAAGACAGGGATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGCACATGGGAGAGGCTaGGAGGACGAGGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PFLQDRDPAAQDAHWGPAAHGRG*EDEGEG Trigger: CCCCTCTCCCTCGTCCTCTCAGCCTCTCCCATGTGC...AGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTCTTGGAGAAAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | GATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTGTGGTTTCTGCCTCCCAGGACCAGCAGGAAGTaGCCAGGAGGTACTGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DPAAQDAHWGPAVWFLPPRTSRK*PGGTGR Trigger: CCTCCCAGTACCTCCTGGCCACTTCCTGCTGGTCCT...GGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTGTGGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGGGTCGTGGCCAGGAGGTACTaGGAGGGGAGCCAGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AVWFLPPCALAVKKQKRVVARRY*EGSQGG Trigger: CCCTCCCTGGCTCCCCTCCCAGTACCTCCTGGCCAC...GACCCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | CTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGCATGGGGGTGGGGTaGGGACGTGGGCTTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPAFNSPKHSHRCHSTPEGMGVG*GRGLPL Trigger: CAGAGGAAGCCCACGTCCCCACCCCACCCCCATGCC...CTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | GCCCACTGGGGTCCTGCTGTGTGGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGCCAGGGAGAGGGGACTaGAGTAGATTGAGGGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: AHWGPAVWFLPPCALAVKPGRGD*SRLREL Trigger: TAGTTCCCTCAATCTACTCCAGTCCCCTCTCCCTGG...CTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CAA 90 bp | CTATTTCACAGGCCAAGCGGATGGGGGTGGAGGGGCTGGGAGGCATaGGGAATGGAAGGTCAGCCTGCACAATGTATGTCAAGAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFHRPSGWGWRGWEA*GMEGQPAQCMSREE Trigger: TTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGTGAAATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CCA 90 bp | CTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGTGGGGTGGGGACGTaGGCTTCCTCTGTATCACCT | + |
|
Preference number: 2 (lower is better) Translates to: LPAFNSPKHSHRCHSTPEGGVGT*ASSVSP Trigger: AGGTGATACAGAGGAAGCCCACGTCCCCACCCCACC...CTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCCAGATTCTTTCTGTCTATGAATGCAGAAGCTGGTCGTGGTGGTATCCCCCAAGCGGATGGGGGTaGAGGGGCTGGGAGGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: YLQILSVYECRSWSWWYPPSGWG*RGWEAL Trigger: CAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGG...GGGATACCACCACGACCAGCTTCTGCATTCATAGACAGAAAGAATCTGGAGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR CAA 90 bp | GTGGGCTCTGAAGCTCCTTCATCAGAGTCCAAGCAGAATGGATATTaGGGACCCAATTCCCCTTTCTCCAAGACAGGGATCCAGCGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VGSEAPSSESKQNGY*GPNSPFSKTGIQRP Trigger: GGGCCGCTGGATCCCTGTCTTGGAGAAAGGGGAATTGGGTCCCAAATATCCATTCTGCTTGGACTCTGATGAAGGAGCTTCAGAGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGAGACCTTTTGGAAGAGCGACCTTTGTCCTCAGGAAACCCCAAACCACACAGAAGTGGAGGGCCTTaGGAGGGTAAGGTGAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: QRDLLEERPLSSGNPKPHRSGGP*EGKVRT Trigger: GGTCCTCACCTTACCCTCCCAAGGCCCTCCACTTCT...GTGTGGTTTGGGGTTTCCTGAGGACAAAGGTCGCTCTTCCAAAAGGTCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR GCA 90 bp | GATGGATTTACCTCCAGATTCTTTCTGTCTATGAATGCAGAAGCTGGTCGTGGTCTCAAACCCAAGGCCTaGCCTGGAGGCCCAAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: DGFTSRFFLSMNAEAGRGLKPKA*PGGPRG Trigger: GCCCCTTGGGCCTCCAGGGCAGGCCTTGGGTTTGAG...ACCACGACCAGCTTCTGCATTCATAGACAGAAAGAATCTGGAGGTAAATCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATGGAAGGTCAGCCTGCACAATGTATGTCAAGAGAGGAAACGTGGAAAGGAAAGGACCAGCAGGAAGTaGCCAGGAGGTACTGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: EWKVSLHNVCQERKRGKERTSRK*PGGTGR Trigger: CCTCCCAGTACCTCCTGGCCACTTCCTGCTGGTCCT...TTCCTTTCCACGTTTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCGGTACTGGGGTTATCTaGGGGGATGAGGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WSVLPAFNSPKHSHRCHSGTGVI*GDEGEG Trigger: CCCCTCTCCCTCATCCCCCCAGATAACCCCAGTACC...GCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | AAACGTGGAAAGGAAACAACTGTTTGCTTATGGACAGAGATTGGTTCCTACTTTGTGGCCAGGAGGTACTaGGAGGGGAGCCAGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KRGKETTVCLWTEIGSYFVARRY*EGSQGG Trigger: CCCTCCCTGGCTCCCCTCCCAGTACCTCCTGGCCAC...AAAGTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCCTTTCCACGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CCA 90 bp | CTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGAACAGAGAGACCTTTTaGAAGAGCGACCTTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LPAFNSPKHSHRCHSTPENRETF*KSDLCP Trigger: AGGACAAAGGTCGCTCTTCCAAAAGGTCTCTCTGTT...CTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | CTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGCGAGTAGATGTGCAGTaGCCTTCAATGTGTAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LPAFNSPKHSHRCHSTPERVDVQ*PSMCSK Trigger: TTTGCTACACATTGAAGGCCACTGCACATCTACTCG...CTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | ATCATTTATTGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTAGGGGCTGGGAGGACTaGGGTAGATTGAGGGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: IIYWSVLPAFNSPKHSHRRGWED*GRLRGL Trigger: TAGCCCCCTCAATCTACCCCAGTCCTCCCAGCCCCT...ACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCAATAAATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGACCTTTTGGAAGAGCGACCTTTGTCCTCAGGAAACCCCAAACCACACAGAAAACAGGAAACATaGAAGCAACATTACAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QRDLLEERPLSSGNPKPHRKQET*KQHYSR Trigger: TCTGCTGTAATGTTGCTTTCATGTTTCCTGTTTTCT...GTGTGGTTTGGGGTTTCCTGAGGACAAAGGTCGCTCTTCCAAAAGGTCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR GCA 90 bp | ATCATTTATTGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTCTGCTGTGTGGTTTCTaGCTCCCTGTGCTCTTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: IIYWSVLPAFNSPKHSHRLLCGF*LPVLLP Trigger: CGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAG...ACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCAATAAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCAGAGTCCAAGCAGAATaGATATTTGGGACCCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: WSVLPAFNSPKHSHRCHSRVQAE*IFGTQF Trigger: GAATTGGGTCCCAAATATCCATTCTGCTTGGACTCT...GCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCCAGATTCTTTCTGTCTATGAATGCAGAAGCTGGTCGTGGTGGTATCCCACAACTGTTTGCTTATaGACAGAGATTGGTTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: YLQILSVYECRSWSWWYPTTVCL*TEIGSY Trigger: GTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGT...GGGATACCACCACGACCAGCTTCTGCATTCATAGACAGAAAGAATCTGGAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR GCA 72 bp | CAGGGATCCAGCGGCCCAGGATGCCCACTGGGGTCCTaGTGTGTGGTTTCTGCCTCCCTGTGCTCTTGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: QGSSGPGCPLGS*CVVSASLCSCR Trigger: ACGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR GCA 72 bp | CCCCTTTCTCCAAGACAGGGATCCAGCGGCCCAGGATaGCCACTGGGGTCCTGCTGTGTGGTTTCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PLSPRQGSSGPG*PLGSCCVVSAS Trigger: GGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTCTTGGAGAAAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 72 bp | CTCCAAGACAGGGATCCAGCGGCCCAGGATGCCCACTaGGGTCCTGCTGTGTGGTTTCTGCCTCCCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQDRDPAAQDAH*GPAVWFLPPCA Trigger: AGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTCTTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 72 bp | TCTGGCCCAGGGTATAGACCGAGTGTGGCATGGGGGTaGGGTGGGGACGTGGGCTTCCTCTGTATCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SGPGYRPSVAWG*GGDVGFLCITL Trigger: CAAGGTGATACAGAGGAAGCCCACGTCCCCACCCCACCCCCATGCCACACTCGGTCTATACCCTGGGCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 72 bp | CCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTGTaGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PAAQDAHWGPAV*FLPPCALAVKK Trigger: TTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 72 bp | GGCCAAGCGGATGGGGGTGGAGGGGCTGGGAGGCATTaGGAATGGAAGGTCAGCCTGCACAATGTATGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQADGGGGAGRH*EWKVSLHNVCQ Trigger: TTGACATACATTGTGCAGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR CCA 72 bp | AAGTCCCGTCTATTTCACAGGCCAAGCGGATGGGGGTaGAGGGGCTGGGAGGCATTGGGAATGGAAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSRLFHRPSGWG*RGWEALGMEGQ Trigger: CTGACCTTCCATTCCCAATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGTGAAATAGACGGGACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAAGGGTCAGGAAACTAGAACCTTGACCATGGGAGCAGGAAGAAGGCACGAGGACTGGGGTAGATaGAGGGGGCTAGGGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TEKGQETRTLTMGAGRRHEDWGR*RGLGRG Trigger: CCCTCTCCCTAGCCCCCTCAATCTACCCCAGTCCTC...GTGCCTTCTTCCTGCTCCCATGGTCAAGGTTCTAGTTTCCTGACCCTTTTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR GCA 72 bp | CCCAGGATGCCCACTGGGGTCCTGCTGTGTGGTTTCTaGCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PRMPTGVLLCGF*LPVLLPLRNRK Trigger: TTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGAGGGAGAAGGGGACTGGAGTAGATaGAGGGAACTAAGGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LIPQSILIVATAPRREGEGDWSR*RELRRG Trigger: CCCTCTCCTTAGTTCCCTCAATCTACTCCAGTCCCC...TTCTCCCTCCCTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR TCA 72 bp | GGAGGGAGAAGTATGCCCATTCTACAGTGGATAAGCTaGAATCCAGAGAGGATACCCCACCACCCCACGACC | + |
|
Preference number: 3 (lower is better) Translates to: GGRSMPILQWIS*NPERIPHHPTT Trigger: GGTCGTGGGGTGGTGGGGTATCCTCTCTGGATTTCAGCTTATCCACTGTAGAATGGGCATACTTCTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR GCA 72 bp | CTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTaGCACAGCACCCCGGAGGGAGGGAGAAGTATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPAFNSPKHSHR*HSTPEGGRSMP Trigger: GGGCATACTTCTCCCTCCCTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR GCA 72 bp | GAGGGGCTGGGAGGCATTGGGAATGGAAGGTCAGCCTaGACAATGTATGTCAAGAGAGGAAACGTGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EGLGGIGNGRSA*TMYVKRGNVER Trigger: CCTTTCCACGTTTCCTCTCTTGACATACATTGTGCAGGCTGACCTTCCATTCCCAATGCCTCCCAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCGTCTATTTCACAGGCCAAGCGGATGGGGGTGGAGGGGCTGGGAGGCATGCTTATGGACAGAGATaGGTTCCTACTTTTAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SPVYFTGQADGGGGAGRHAYGQR*VPTFRT Trigger: TGTTCTAAAAGTAGGAACCAATCTCTGTCCATAAGC...ATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGTGAAATAGACGGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGAGGAACAGAGAGACCTTTaGGAAGAGCGACCTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QHLIPQSILIVATAPRREEQRDL*EERPLS Trigger: GGACAAAGGTCGCTCTTCCAAAAGGTCTCTCTGTTC...CTCCCTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CCA 72 bp | ATCACCTTGTCCCAGGTAGAGATCTTCCTGAGCATTTaGGAACAGAGAGACCTTTTGGAAGAGCGACCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ITLSQVEIFLSI*EQRDLLEERPL Trigger: CAAAGGTCGCTCTTCCAAAAGGTCTCTCTGTTCCCAAATGCTCAGGAAGATCTCTACCTGGGACAAGGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGAAGCTCCTTCATCAGAGTCCAAGCAGAATGGATATTTGGGACCCAATTTGCCTCCCTGTGCTCTaGCCGTTAAGAAACAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALKLLHQSPSRMDIWDPICLPVL*PLRNRK Trigger: TTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCA...AATTGGGTCCCAAATATCCATTCTGCTTGGACTCTGATGAAGGAGCTTCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR TCA 72 bp | TCCCTAAAACTGGTATTGCCCCATCTTAGTGGGCTCTaGAGCTCCTTCATCAGAGTCCAAGCAGAATGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SLKLVLPHLSGL*SSFIRVQAEWI Trigger: TATCCATTCTGCTTGGACTCTGATGAAGGAGCTTCAGAGCCCACTAAGATGGGGCAATACCAGTTTTAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR TCA 72 bp | AACTGGATGGATTTACCTCCAGATTCTTTCTGTCTATaGATGCAGAAGCTGGTCGTGGTGGTATCCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NWMDLPPDSFCL*MQKLVVVVSLS Trigger: ACTTAGGGATACCACCACGACCAGCTTCTGCATTCATAGACAGAAAGAATCTGGAGGTAAATCCATCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCCACCTCAAACCCAAGGCCTGCCCTGGAGGCCCAAGGGGCCAGAGGCTCCAGGACAGCCCCTGTaGGCGGTCCTACCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPPQTQGLPWRPKGPEAPGQPL*AVLPRR Trigger: TCTTCTGGGTAGGACCGCTCACAGGGGCTGTCCTGG...AGCCTCTGGCCCCTTGGGCCTCCAGGGCAGGCCTTGGGTTTGAGGTGGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCCACCTCAAACCCAAGGCCTGCCCTGGAGGCCCAAGGGGCCAGAGGCTTGGCGTGGGCCCCGCTaGTCTTCCAGGAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGPPQTQGLPWRPKGPEAWRGPR*SSRRSA Trigger: TGCAGATCTCCTGGAAGACCAGCGGGGCCCACGCCA...AGCCTCTGGCCCCTTGGGCCTCCAGGGCAGGCCTTGGGTTTGAGGTGGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCAAGACAGGGATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTCGAACTTCCCAACAATaGCGGCAGGGCCGAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPRQGSSGPGCPLGSCCRTSQQ*RQGRRS Trigger: GCTCCTTCGGCCCTGCCGTCATTGTTGGGAAGTTCG...ACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTCTTGGAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | TTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGAGGGAGAAGAGCAGCCCCAGCTGTaGCCCCAGCCAGCTGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPQSILIVATAPRREGEEQPQL*PQPAAQ Trigger: CTGCGCAGCTGGCTGGGGCCACAGCTGGGGCTGCTC...TTCTCCCTCCCTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCAAGACAGGGATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTCTCAGAGTTTGTCTGTaGTTCTTTCTTCTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPRQGSSGPGCPLGSCCLRVCL*FFLLGL Trigger: GAGCCCCAGAAGAAAGAATCACAGACAAACTCTGAG...ACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATCCCTGTCTTGGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | CTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGTGGCGTGGGCCCCGCTaGTCTTCCAGGAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAFNSPKHSHRCHSTPEWRGPR*SSRRSA Trigger: TGCAGATCTCCTGGAAGACCAGCGGGGCCCACGCCA...CTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGGGTCAGGAACAGCAGGGTTGGCGTaGGCCCCGCTGGTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGFCLPVLLPLRNRKGSGTAGLA*APLVFQ Trigger: CTGGAAGACCAGCGGGGCCCACGCCAACCCTGCTGT...TCCTGACCCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | AGTCCCGTCTATTTCACAGGCCAAGCGGATGGGGGTGGAGGGGCTGGGAGGCATCTCTCGAATACCTCCTaGAGTTACCCCGTAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVYFTGQADGGGGAGRHLSNTS*SYPVKK Trigger: CTTCTTTACGGGGTAACTCCAGGAGGTATTCGAGAG...ATGCCTCCCAGCCCCTCCACCCCCATCCGCTTGGCCTGTGAAATAGACGGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| 3UTR CAA 72 bp | GGGTGGGGTGGGGACGTGGGCTTCCTCTGTATCACCTaGTCCCAGGTAGAGATCTTCCTGAGCATTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWGGDVGFLCIT*SQVEIFLSIWE Trigger: TTCCCAAATGCTCAGGAAGATCTCTACCTGGGACAAGGTGATACAGAGGAAGCCCACGTCCCCACCCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR TCA 90 bp | TGTGGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGGGTCAGGACCAGGACAGCCCCTGTaGGCGGTCCTACCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGFCLPVLLPLRNRKGSGPGQPL*AVLPRR Trigger: TCTTCTGGGTAGGACCGCTCACAGGGGCTGTCCTGG...TCCTGACCCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | CAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGAGTGGTGCCCACAAGGATaGCCAATCGCTGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLIPQSILIVATAPRREWCPQG*PIAGLQ Trigger: CTGTAGCCCAGCGATTGGCCATCCTTGTGGGCACCA...CTCCCTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR TCA 90 bp | CCGGACAGCCTCCTCACACGGAGAAGTCAAACACTGAAAGAAAGAAGAAAACAGCGAACTTCCCAACAATaGCGGCAGGGCCGAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDSLLTRRSQTLKERRKQRTSQQ*RQGRRS Trigger: GCTCCTTCGGCCCTGCCGTCATTGTTGGGAAGTTCG...CTGTTTTCTTCTTTCTTTCAGTGTTTGACTTCTCCGTGTGAGGAGGCTGTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACAACTGTTTGCTTATGGACAGAGATTGGTTCCTACTTTTAGAACAGGAGGAGCAGCCCCAGCTGTaGCCCCAGCCAGCTGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNNCLLMDRDWFLLLEQEEQPQL*PQPAAQ Trigger: CTGCGCAGCTGGCTGGGGCCACAGCTGGGGCTGCTC...CTCCTGTTCTAAAAGTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | TATCACCTTGTCCCAGGTAGAGATCTTCCTGAGCATTTGGGAACAGAGAGACCTGCCGAAGGAGCGGGCTaGGTTCATGGAACAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YHLVPGRDLPEHLGTERPAEGAG*VHGTAS Trigger: ACTGGCTGTTCCATGAACCCAGCCCGCTCCTTCGGC...AGGTCTCTCTGTTCCCAAATGCTCAGGAAGATCTCTACCTGGGACAAGGTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | TACCTCCAGATTCTTTCTGTCTATGAATGCAGAAGCTGGTCGTGGTGGTATCCCGCCGAAGGAGCGGGCTaGGTTCATGGAACAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLQILSVYECRSWSWWYPAEGAG*VHGTAS Trigger: ACTGGCTGTTCCATGAACCCAGCCCGCTCCTTCGGC...GGGATACCACCACGACCAGCTTCTGCATTCATAGACAGAAAGAATCTGGAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR GCA 90 bp | TATCACCTTGTCCCAGGTAGAGATCTTCCTGAGCATTTGGGAACAGAGAGACCTACACAGAGCACCAGCTaGAGCGTCAGAACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHLVPGRDLPEHLGTERPTQSTS*SVRTSS Trigger: GGAGCTGGTTCTGACGCTGCAGCTGGTGCTCTGTGT...AGGTCTCTCTGTTCCCAAATGCTCAGGAAGATCTCTACCTGGGACAAGGTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTGGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGGGTCAATGAGGTGGCCCAGTaGCACAGAGGTTCCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVWFLPPCALAVKKQKRVNEVAQ*HRGSNH Trigger: ATGATTGGAACCTCTGTGGCACTGGGCCACCTCATT...GACCCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTCTGCCTCCCTGTGCTCTTGCCGTTAAGAAACAGAAAAGGGTCAGGATCTGCCGGCCATCCATaGAAGCAAAGACACAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGFCLPVLLPLRNRKGSGSAGHP*KQRHRA Trigger: TGCTCTGTGTCTTTGCTTCCATGGATGGCCGGCAGA...TCCTGACCCTTTTCTGTTTCTTAACGGCAAGAGCACAGGGAGGCAGAAACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CAA 72 bp | GAAGCTCCTTCATCAGAGTCCAAGCAGAATGGATATTaGGGACCCAATTCCCCTTTCTCCAAGACAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EAPSSESKQNGY*GPNSPFSKTGI Trigger: GATCCCTGTCTTGGAGAAAGGGGAATTGGGTCCCAAATATCCATTCTGCTTGGACTCTGATGAAGGAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CAA 72 bp | GAGATCTTCCTGAGCATTTGGGAACAGAGAGACCTTTaGGAAGAGCGACCTTTGTCCTCAGGAAACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIFLSIWEQRDL*EERPLSSGNPK Trigger: TTTGGGGTTTCCTGAGGACAAAGGTCGCTCTTCCAAAAGGTCTCTCTGTTCCCAAATGCTCAGGAAGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAAGCTCCTTCATCAGAGTCCAAGCAGAATGGATATTTGGGACCCAATTAAACGTACAGCCCCGTaGCCAGGAACTCAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALKLLHQSPSRMDIWDPIKRTAP*PGTQQK Trigger: TTTTTGCTGAGTTCCTGGCCACGGGGCTGTACGTTT...AATTGGGTCCCAAATATCCATTCTGCTTGGACTCTGATGAAGGAGCTTCAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCAAGTTGGAAAATTAACTGGATGGATTTACCTCCAGATTCTTTCTGTCTGGTGCCCACAAGGATaGCCAATCGCTGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRQVGKLTGWIYLQILSVWCPQG*PIAGLQ Trigger: CTGTAGCCCAGCGATTGGCCATCCTTGTGGGCACCA...GACAGAAAGAATCTGGAGGTAAATCCATCCAGTTAATTTTCCAACTTGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAAAGGAAACAACTGTTTGCTTATGGACAGAGATTGGTTCCTACTTTTAGAACACAGAGCACCAGCTaGAGCGTCAGAACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VERKQLFAYGQRLVPTFRTQSTS*SVRTSS Trigger: GGAGCTGGTTCTGACGCTGCAGCTGGTGCTCTGTGT...TCTAAAAGTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCCTTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCCTCTCGAATACCTCCTaGAGTTACCCCGTAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSVLPAFNSPKHSHRCHSLSNTS*SYPVKK Trigger: CTTCTTTACGGGGTAACTCCAGGAGGTATTCGAGAG...GCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CAA 72 bp | TATCACCTTGTCCCAGGTAGAGATCTTCCTGAGCATTaGGGAACAGAGAGACCTTTTGGAAGAGCGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YHLVPGRDLPEH*GTERPFGRATF Trigger: AAAGGTCGCTCTTCCAAAAGGTCTCTCTGTTCCCAAATGCTCAGGAAGATCTCTACCTGGGACAAGGTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CCA 90 bp | AAACGTGGAAAGGAAACAACTGTTTGCTTATGGACAGAGATTGGTTCCTACTTTTCTGCCGGCCATCCATaGAAGCAAAGACACAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRGKETTVCLWTEIGSYFSAGHP*KQRHRA Trigger: TGCTCTGTGTCTTTGCTTCCATGGATGGCCGGCAGA...AAAGTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCCTTTCCACGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACAACTGTTTGCTTATGGACAGAGATTGGTTCCTACTTTTAGAACAGGAGTGTGATTCTTTCTTCTaGGGCTCCAGGTCTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: GNNCLLMDRDWFLLLEQECDSFF*GSRSTT Trigger: AGTGGTAGACCTGGAGCCCCAGAAGAAAGAATCACA...CTCCTGTTCTAAAAGTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGTTGGAAAATTAACTGGATGGATTTACCTCCAGATTCTTTCTGTCTATAATGAGGTGGCCCAGTaGCACAGAGGTTCCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQVGKLTGWIYLQILSVYNEVAQ*HRGSNH Trigger: ATGATTGGAACCTCTGTGGCACTGGGCCACCTCATT...ATAGACAGAAAGAATCTGGAGGTAAATCCATCCAGTTAATTTTCCAACTTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGTTGGAAAATTAACTGGATGGATTTACCTCCAGATTCTTTCTGTCTATAAACGTACAGCCCCGTaGCCAGGAACTCAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQVGKLTGWIYLQILSVYKRTAP*PGTQQK Trigger: TTTTTGCTGAGTTCCTGGCCACGGGGCTGTACGTTT...ATAGACAGAAAGAATCTGGAGGTAAATCCATCCAGTTAATTTTCCAACTTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CCA 90 bp | ATCATTTATTGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGTGATTCTTTCTTCTaGGGCTCCAGGTCTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIYWSVLPAFNSPKHSHRCDSFF*GSRSTT Trigger: AGTGGTAGACCTGGAGCCCCAGAAGAAAGAATCACA...ACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCAATAAATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| 3UTR CAA 72 bp | ATGTCAAGAGAGGAAACGTGGAAAGGAAACAACTGTTaGCTTATGGACAGAGATTGGTTCCTACTTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSREETWKGNNC*LMDRDWFLLLE Trigger: TTCTAAAAGTAGGAACCAATCTCTGTCCATAAGCAAACAGTTGTTTCCTTTCCACGTTTCCTCTCTTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CAA 90 bp | GATCCAGCGGCCCAGGATGCCCACTGGGGTCCTGCTGTGTGGTTTCTGCCTCCCCCACCGCCTGGCCAGTaGATGTGCTGTTGTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: DPAAQDAHWGPAVWFLPPPPPGQ*MCCCGP Trigger: TGGTCCACAACAGCACATCAACTGGCCAGGCGGTGG...GGGAGGCAGAAACCACACAGCAGGACCCCAGTGGGCATCCTGGGCCGCTGGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS GCA 90 bp | CAGGACAGCCCCTGTGAGCGGTCCTACCCAGAAGATCCAATGGACTaGGAACTTCCCAACAATGACGGCAGGGCCGAAGGAGCGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDSPCERSYPEDPMD*ELPNNDGRAEGAGW Trigger: CCAGCCCGCTCCTTCGGCCCTGCCGTCATTGTTGGGAAGTTCGCAGTCCATTGGATCTTCTGGGTAGGACCGCTCACAGGGGCTGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CCA 90 bp | GAAGCCAGGACAGCCCCTGTGAGCGGTCCTACCCAGAAGATCCAATaGACTGCGAACTTCCCAACAATGACGGCAGGGCCGAAGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EARTAPVSGPTQKIQ*TANFPTMTAGPKER Trigger: CCGCTCCTTCGGCCCTGCCGTCATTGTTGGGAAGTTCGCAGTCCATTGGATCTTCTGGGTAGGACCGCTCACAGGGGCTGTCCTGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCACCCCGGAGGGAGCTGTTGTGGACCACGTaGACCCCAAGGGTCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QHLIPQSILIVATAPRRELLWTT*TPRVSR Trigger: TCGAGAGACCCTTGGGGTCAACGTGGTCCACAACAG...CTCCCTCCGGGGTGCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGTTCTACCAGCATTTAATTCCCCAAAGCATTCTCATCGTTGCCACAGCGTGGCTGTGGCCAGATaGAAGGTGATGGCGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WSVLPAFNSPKHSHRCHSVAVAR*KVMAIW Trigger: CCAGATCGCCATCACCTTCAATCTGGCCACAGCCAC...GCTGTGGCAACGATGAGAATGCTTTGGGGAATTAAATGCTGGTAGAACACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS TCA 90 bp | CTCACACGGAGAAGTCAAACATTCTGTGTCCTCAGAGTTTGTCTGTaGTTCTTTCTTCTGGGGCTCCAGGTCTACCACTTTCTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTRRSQTFCVLRVCL*FFLLGLQVYHFLHL Trigger: AAGGTGGAGAAAGTGGTAGACCTGGAGCCCCAGAAGAAAGAATCACAGACAAACTCTGAGGACACAGAATGTTTGACTTCTCCGTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCAAGTTGGAAAATTAACTGGATGGATTTACCTCCAGATTCTTTCTGTCCTGTTGTGGACCACGTaGACCCCAAGGGTCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRQVGKLTGWIYLQILSVLLWTT*TPRVSR Trigger: TCGAGAGACCCTTGGGGTCAACGTGGTCCACAACAG...GACAGAAAGAATCTGGAGGTAAATCCATCCAGTTAATTTTCCAACTTGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGTTGGAAAATTAACTGGATGGATTTACCTCCAGATTCTTTCTGTCTATGTGGCTGTGGCCAGATaGAAGGTGATGGCGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQVGKLTGWIYLQILSVYVAVAR*KVMAIW Trigger: CCAGATCGCCATCACCTTCAATCTGGCCACAGCCAC...ATAGACAGAAAGAATCTGGAGGTAAATCCATCCAGTTAATTTTCCAACTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230075.2 |
||
| CDS GCA 72 bp | GGGTTGGCGTGGGCCCCGCTGGTCTTCCAGGAGATCTaGACGGCTGTGGCTGTGGCCAGATTGAAGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GLAWAPLVFQEI*TAVAVARLKVM Trigger: CATCACCTTCAATCTGGCCACAGCCACAGCCGTGCAGATCTCCTGGAAGACCAGCGGGGCCCACGCCAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CCA 72 bp | GTGGCCCAGTGCCACAGAGGTTCCAATCATGGCAGCTaGGGACGCCAAGGTCTGCCGGCCATCCATGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VAQCHRGSNHGS*GRQGLPAIHGS Trigger: GCTTCCATGGATGGCCGGCAGACCTTGGCGTCCCCAGCTGCCATGATTGGAACCTCTGTGGCACTGGGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CAA 90 bp | CCGCTGGTCTTCCAGGAGATCTGCACGGCTGTGGCTGTGGCCAGATaGAAGGTGATGGCGATCTGGAGCACAGAGGGAAGCGCCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLVFQEICTAVAVAR*KVMAIWSTEGSATG Trigger: GCCTGTGGCGCTTCCCTCTGTGCTCCAGATCGCCATCACCTTCAATCTGGCCACAGCCACAGCCGTGCAGATCTCCTGGAAGACCAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CAA 72 bp | TACAGCCCCGTGGCCAGGAACTCAGCAAAAAGCGCCTaGCTGATGGCGGTCCAAAGCCCGCCAACCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: YSPVARNSAKSA*LMAVQSPPTRR Trigger: CCTTCTGGTTGGCGGGCTTTGGACCGCCATCAGCAAGGCGCTTTTTGCTGAGTTCCTGGCCACGGGGCTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS GCA 72 bp | GAGGTTCCAATCATGGCAGCTGGGGACGCCAAGGTCTaGCGGCCATCCATGGAAGCAAAGACACAGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EVPIMAAGDAKV*RPSMEAKTQST Trigger: GGTGCTCTGTGTCTTTGCTTCCATGGATGGCCGGCAGACCTTGGCGTCCCCAGCTGCCATGATTGGAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CCA 72 bp | ACAGCCCCTGTGAGCGGTCCTACCCAGAAGATCCAATaGACTGCGAACTTCCCAACAATGACGGCAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TAPVSGPTQKIQ*TANFPTMTAGP Trigger: CGGCCCTGCCGTCATTGTTGGGAAGTTCGCAGTCCATTGGATCTTCTGGGTAGGACCGCTCACAGGGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS GCA 72 bp | ACAGCCAGTGAAGTAGATCCCAATGAGGTGGCCCAGTaGCACAGAGGTTCCAATCATGGCAGCTGGGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: TASEVDPNEVAQ*HRGSNHGSWGR Trigger: GCGTCCCCAGCTGCCATGATTGGAACCTCTGTGGCACTGGGCCACCTCATTGGGATCTACTTCACTGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS GCA 72 bp | CCCTGTGAGCGGTCCTACCCAGAAGATCCAATGGACTaGGAACTTCCCAACAATGACGGCAGGGCCGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PCERSYPEDPMD*ELPNNDGRAEG Trigger: TCCTTCGGCCCTGCCGTCATTGTTGGGAAGTTCGCAGTCCATTGGATCTTCTGGGTAGGACCGCTCACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS GCA 72 bp | GGGGCTCCAGGTCTACCACTTTCTCCACCTTTGTGGTaGCCACAAGGATGGCCAATCGCTGGGCTACAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAPGLPLSPPLW*PQGWPIAGLQS Trigger: AGACTGTAGCCCAGCGATTGGCCATCCTTGTGGGCACCACAAAGGTGGAGAAAGTGGTAGACCTGGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CCA 72 bp | TCTGGGGCTCCAGGTCTACCACTTTCTCCACCTTTGTaGTGCCCACAAGGATGGCCAATCGCTGGGCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: SGAPGLPLSPPL*CPQGWPIAGLQ Trigger: CTGTAGCCCAGCGATTGGCCATCCTTGTGGGCACCACAAAGGTGGAGAAAGTGGTAGACCTGGAGCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS TCA 72 bp | CCGCCTGGCCAGTTGATGTGCTGTTGTGGACCACGTTaGCCCCAAGGGTCTCTCGAATACCTCCTGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PPGQLMCCCGPR*PQGSLEYLLEL Trigger: TAACTCCAGGAGGTATTCGAGAGACCCTTGGGGTCAACGTGGTCCACAACAGCACATCAACTGGCCAGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CAA 72 bp | ACCGCCTGGCCAGTTGATGTGCTGTTGTGGACCACGTaGACCCCAAGGGTCTCTCGAATACCTCCTGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: TAWPVDVLLWTT*TPRVSRIPPGV Trigger: AACTCCAGGAGGTATTCGAGAGACCCTTGGGGTCAACGTGGTCCACAACAGCACATCAACTGGCCAGGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CAA 72 bp | TCTTCTGGGGCTCCAGGTCTACCACTTTCTCCACCTTaGTGGTGCCCACAAGGATGGCCAATCGCTGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSGAPGLPLSPP*WCPQGWPIAGL Trigger: TAGCCCAGCGATTGGCCATCCTTGTGGGCACCACAAAGGTGGAGAAAGTGGTAGACCTGGAGCCCCAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CCA 72 bp | CTACCACTTTCTCCACCTTTGTGGTGCCCACAAGGATaGCCAATCGCTGGGCTACAGTCTTGGTGTCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPLSPPLWCPQG*PIAGLQSWCQG Trigger: TCCCTGACACCAAGACTGTAGCCCAGCGATTGGCCATCCTTGTGGGCACCACAAAGGTGGAGAAAGTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CCA 72 bp | TCCACCTTTGTGGTGCCCACAAGGATGGCCAATCGCTaGGCTACAGTCTTGGTGTCAGGGAACAAGATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: STFVVPTRMANR*ATVLVSGNKIK Trigger: CTTTATCTTGTTCCCTGACACCAAGACTGTAGCCCAGCGATTGGCCATCCTTGTGGGCACCACAAAGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||
| CDS CAA 90 bp | CAGCCTCCTCACACGGAGAAGTCAAACATTCTGTGTCCTCAGAGTTaGTCTGTGATTCTTTCTTCTGGGGCTCCAGGTCTACCACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPHTEKSNILCPQS*SVILSSGAPGLPLS Trigger: AGAAAGTGGTAGACCTGGAGCCCCAGAAGAAAGAATCACAGACAAACTCTGAGGACACAGAATGTTTGACTTCTCCGTGTGAGGAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023754.6 |
||
| CDS CCA 72 bp | TCTGTGTCCTCAGAGTTTGTCTGTGATTCTTTCTTCTaGGGCTCCAGGTCTACCACTTTCTCCACCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVSSEFVCDSFF*GSRSTTFSTFV Trigger: CACAAAGGTGGAGAAAGTGGTAGACCTGGAGCCCCAGAAGAAAGAATCACAGACAAACTCTGAGGACACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023754.6 ENSMUST00000230075.2 |
||