Pregenerated sensors for AQP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044217Ensembl transcript IDs: ENSMUST00000088200.13, ENSMUST00000169082.3, ENSMUST00000229728.2, ENSMUST00000231163.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCCAGGGGCTGAGGGACTGGCCCCTGCCCGGTGCCGGTCAGTGTaGCGTCAGCTCGATGGTCTTCTTCCGCTCCTCTCTATGATCTTC | + |
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Preference number: 1 (lower is better) Translates to: GPGAEGLAPARCRSV*RQLDGLLPLLSMIF Trigger: GAAGATCATAGAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCACACTGACCGGCACCGGGCAGGGGCCAGTCCCTCAGCCCCTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR CCA 90 bp | GGGACTGGCCCCTGCCCGGTGCCGGTCAGTGTGCCGTCAGCTCGATaGTCTTCTTCCGCTCCTCTCTATGATCTTCCCAGTCCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: GTGPCPVPVSVPSAR*SSSAPLYDLPSPPL Trigger: CAGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCACACTGACCGGCACCGGGCAGGGGCCAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR CCA 90 bp | GCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCTGAGCTGTaGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: AVSLALPSQSLRSEL*QSFCLIPKRPCPWP Trigger: GGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR TCA 90 bp | CTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCTaGGCTGTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LNCCELGTAFTISEV*AVAVVLPNSKEALS Trigger: GGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR CCA 90 bp | AGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTaGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACC | + |
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Preference number: 1 (lower is better) Translates to: RALRQCPLCLPGGRL*HMRYWVGEINRAIT Trigger: GGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR TCA 90 bp | GGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCTaGACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: GWRDKQGYHPFLGWS*TAVSLALPSQSLRS Trigger: AGACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGACAGGGGCTGAGGGACTaGCCCCTGCCCGGTGCCGGT | + |
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Preference number: 2 (lower is better) Translates to: CPLCLPGGRLWHMRYWVGQGLRD*PLPGAG Trigger: ACCGGCACCGGGCAGGGGCCAGTCCCTCAGCCCCTG...TCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGCTGGCCCCTGCCCGGTaGCGGTCAGTGTGCCGTCAG | + |
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Preference number: 2 (lower is better) Translates to: WHMRYWVGEINRAITPFWLAPAR*RSVCRQ Trigger: CTGACGGCACACTGACCGGCACCGGGCAGGGGCCAG...CCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGGGGATGGTCCTGAACTaGTGTGAGCTTGGCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: PLCLPGGRLWHMRYWVGEGMVLN*CELGTA Trigger: GGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC...CTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCCCAAGTGTCCCATCATaGGCTTCTGCTCCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: PEELSGNVPSVYLGEGFGPSVPS*ASAPIP Trigger: TGGGATGGGAGCAGAAGCCCATGATGGGACACTTGG...GCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTCCTGAACTGCTGTaGGCTTGGCACTGCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: QAMSPLSTWGKALAHEILGPELL*AWHCLH Trigger: GTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACC...CAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCAAGAGGCCCTGTCCCTaGCCCACACCCAAGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EILGWRDKQGYHPFLGWSKRPCP*PTPKCP Trigger: GGGACACTTGGGTGTGGGCCAGGGACAGGGCCTCTT...GGACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR GCA 90 bp | GAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCCCCATCATGGGCTTCTaGTCCCATCCCATCCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: EILGWRDKQGYHPFLGWSPIMGF*SHPIPV Trigger: CACGGGGATGGGATGGGAGCAGAAGCCCATGATGGG...GGACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCCCAAGTGTCCCATCATaGGCTTCTGCTCCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GMVLNCCELGTAFTISEVPSVPS*ASAPIP Trigger: TGGGATGGGAGCAGAAGCCCATGATGGGACACTTGG...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGAAAGAGGCCCTGTCCCTaGCCCACACCCAAGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: AHEILGWRDKQGYHPFLGKRPCP*PTPKCP Trigger: GGGACACTTGGGTGTGGGCCAGGGACAGGGCCTCTT...TCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATCCTGGGGGAAGGCTTTaGCACATGAGATACTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KSSQAMSPLSTWGKALAHPGGRL*HMRYWV Trigger: AACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGG...ATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGATGCTAGGGAGAGGTaGTCCAAACTCTTCGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KSSQAMSPLSTWGKALAHDARER*SKLFVF Trigger: GAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATC...ATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGATGCTAGGGAGAGGTaGTCCAAACTCTTCGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPLSTWGKALAHEILGWRDARER*SKLFVF Trigger: GAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATC...TCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTTCTGGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCGATGCTAGGGAGAGGTaGTCCAAACTCTTCGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLSGMVLNCCELGTAFTIDARER*SKLFVF Trigger: GAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATC...GATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCCAGAAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGCTATCACCCCTTTCTaGGATGGTCCTGAACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QCPLCLPGGRLWHMRYWVAITPF*DGPELL Trigger: CAGCAGTTCAGGACCATCCCAGAAAGGGGTGATAGC...AACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTCCTGGGGGAAGGCTTTaGCACATGAGATACTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: QCPLCLPGGRLWHMRYWVPGGRL*HMRYWV Trigger: AACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGG...AACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGATAAACGTGCCGTCAGCTCGATaGTCTTCTTCCGCTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: CLPGGRLWHMRYWVGEINVPSAR*SSSAPL Trigger: GAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCAC...GTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR CAA 90 bp | AAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTaGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCAC | + |
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Preference number: 2 (lower is better) Translates to: KSSQAMSPLSTWGKA*AHEILGWRDKQGYH Trigger: GTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCAAGTGTCCCATCATaGGCTTCTGCTCCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: MRYWVGEINRAITPFWDGPSVPS*ASAPIP Trigger: TGGGATGGGAGCAGAAGCCCATGATGGGACACTTGG...ACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGACAATCTCTGAGGTCTaGGCTGTGGCAGTCGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LAHEILGWRDKQGYHPFLTISEV*AVAVVL Trigger: CAGAACGACTGCCACAGCTCAGACCTCAGAGATTGT...CAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAATAAATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCGGTCCTGAACTGCTGTaGGCTTGGCACTGCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PEINKMALDEPSISLLKSGPELL*AWHCLH Trigger: GTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACC...GCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTATTTATTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGTTCCGCTCCTCTCTATaGTCTTCCCAGTCCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LAHEILGWRDKQGYHPFLFRSSL*SSQSSS Trigger: AGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAA...CAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | GCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTCATGAGATACTGGGTTaGAGAGATAAACAGGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: AMSPLSTWGKALAHEILGHEILG*RDKQGY Trigger: ATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATG...ACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAATAAATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCTGGCACATGAGATACTaGGTTGGAGAGATAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: PEINKMALDEPSISLLKSWHMRY*VGEINR Trigger: CCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCA...GCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTATTTATTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR GCA 72 bp | GCTGAGGGACTGGCCCCTGCCCGGTGCCGGTCAGTGTaGCGTCAGCTCGATGGTCTTCTTCCGCTCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: AEGLAPARCRSV*RQLDGLLPLLS Trigger: AGAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCACACTGACCGGCACCGGGCAGGGGCCAGTCCCTCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR CCA 72 bp | TGGGCTTCTGCTCCCATCCCATCCCCGTGTGCGGCATaGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: WASAPIPSPCAA*GSNAASPAERM Trigger: CATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGATGGGATGGGAGCAGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR CCA 72 bp | CCCTGCCCGGTGCCGGTCAGTGTGCCGTCAGCTCGATaGTCTTCTTCCGCTCCTCTCTATGATCTTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: PCPVPVSVPSAR*SSSAPLYDLPS Trigger: ACTGGGAAGATCATAGAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCACACTGACCGGCACCGGGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| 3UTR TCA 72 bp | GTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTaGGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: VCGMGIQCCLSS*EDARERCSKLF Trigger: GAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR GCA 72 bp | TCACAATCTCTGAGGTCTGAGCTGTGGCAGTCGTTCTaGCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: SQSLRSELWQSF*LIPKRPCPWPT Trigger: TGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR CCA 72 bp | CTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTaGGGGAAGGCTTTGGCACATGAGATACTGGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LKSSQAMSPLST*GKALAHEILGW Trigger: CCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR CCA 72 bp | TTGGCACTGCCTTCACAATCTCTGAGGTCTGAGCTGTaGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LALPSQSLRSEL*QSFCLIPKRPC Trigger: ACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGAAGGCAGTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| 3UTR CCA 72 bp | AGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTaGCACATGAGATACTGGGTTGGAGAGATAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: RQCPLCLPGGRL*HMRYWVGEINR Trigger: CCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| 3UTR TCA 72 bp | ATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTaGAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCT | + |
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Preference number: 3 (lower is better) Translates to: IRWHSTNHLSLS*RALRQCPLCLP Trigger: AGGTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR GCA 90 bp | GAGGGACTGGCCCCTGCCCGGTGCCGGTCAGTGTGCCGTCAGCTCGATGGTCTTCGAGGGCCACTTGAGTaGCGAGCCCAGGCCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: EGLAPARCRSVCRQLDGLRGPLE*RAQAKE Trigger: TTCTTTGGCCTGGGCTCGGCACTCAAGTGGCCCTCG...AAGACCATCGAGCTGACGGCACACTGACCGGCACCGGGCAGGGGCCAGTCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCAGCCCACCGGGCTGGTaGGGCGGGAGTCCGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASPAERMLGRGAPNSSSSSPPGW*GGSPWR Trigger: CCTCCACGGACTCCCGCCGCACCAGCCCGGTGGGCT...GGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS-3UTR GCA 90 bp | GCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTAGCCCACCGGGCTGGTaGGGCGGGAGTCCGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AASPAERMLGRGAPNSSSSPPGW*GGSPWR Trigger: CCTCCACGGACTCCCGCCGCACCAGCCCGGTGGGCT...AGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS-3UTR GCA 90 bp | GGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACAGCCCACCGGGCTGGTaGGGCGGGAGTCCGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSNAASPAERMLGRGAPNSPPGW*GGSPWR Trigger: CCTCCACGGACTCCCGCCGCACCAGCCCGGTGGGCT...GTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS-3UTR TCA 90 bp | GAGGGACTGGCCCCTGCCCGGTGCCGGTCAGTGTGCCGTCAGCTCGATGGTCTTCTGCGAACACGGCCTTaGAGAAGGCAACTGAACACA | + |
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Preference number: 4 (lower is better) Translates to: EGLAPARCRSVCRQLDGLLRTRP*RRQLNT Trigger: TGTGTTCAGTTGCCTTCTTCAAGGCCGTGTTCGCAG...AAGACCATCGAGCTGACGGCACACTGACCGGCACCGGGCAGGGGCCAGTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS-3UTR TCA 90 bp | TGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGCGCCGAGGGCCACTTaGGTGCCGAGCCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPLCLPGGRLWHMRYWVGAPRAT*VPSPGQ Trigger: TTGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGC...TCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACACCCAATGGAGATCTGCAGAATaGTGGGCAGCGCCGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVLPNSKEALSLAHTQWRSAE*WAAPRA Trigger: GGCCCTCGGCGCTGCCCACCATTCTGCAGATCTCCA...TTGGGTGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAACAGGTCCCAGGGCTTaGGCCAAGGTACCTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPCAAWGSNAASPAERMLTGPRA*AKVPMA Trigger: GGCCATAGGTACCTTGGCCCAAGCCCTGGGACCTGT...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTGCGCCGAGGGCCACTTaGGTGCCGAGCCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPAERMLGRGAPNSSSSFAPRAT*VPSPGQ Trigger: TTGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGC...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACACCCAAACCCACCAGCTGGGCTaGCACGTAGAAGATGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VAVVLPNSKEALSLAHTQTHQLG*HVEDGS Trigger: CGAGCCATCTTCTACGTGGCAGCCCAGCTGGTGGGT...TTGGGTGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | AGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCTAGCCCACCGGGCTGGTaGGGCGGGAGTCCGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYWVGEINRAITPFWDGPSPPGW*GGSPWR Trigger: CCTCCACGGACTCCCGCCGCACCAGCCCGGTGGGCT...AGGACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTGCGGCGGGAGTCCGTaGAGGAGAAGATGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSNAASPAERMLGRGAPNCGGSP*RRRCRG Trigger: CCCTCTGCATCTTCTCCTCCACGGACTCCCGCCGCA...GTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR TCA 90 bp | AAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGGCGCCGAGGGCCACTTaGGTGCCGAGCCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KMALDEPSISLLKSSQAMAPRAT*VPSPGQ Trigger: TTGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGC...CATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGCTCATATGTGCCTTTaGCCACAGCCACACGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPCAAWGSNAASPAERMLAHMCL*PQPHGR Trigger: ACGACCGTGTGGCTGTGGTCAAAGGCACATATGAGC...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCCGAGGGCCACTTGAGTaGCGAGCCCAGGCCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASPAERMLGRGAPNSSSSRGPLE*RAQAKE Trigger: TTCTTTGGCCTGGGCTCGGCACTCAAGTGGCCCTCG...GGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCACCCACCAGCTGGGCTaGCACGTAGAAGATGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASPAERMLGRGAPNSSSSTHQLG*HVEDGS Trigger: CGAGCCATCTTCTACGTGGCAGCCCAGCTGGTGGGT...GGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTCCAACCAGTACAGGATaGCTGCTCCAGCAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAWGSNAASPAERMLGRGPTSTG*LLQQWH Trigger: GTGCCATTGCTGGAGCAGGCATCCTGTACTGGTTGG...ACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATTGCGGCGGGAGTCCGTaGAGGAGAAGATGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSQAMSPLSTWGKALAHCGGSP*RRRCRG Trigger: CCCTCTGCATCTTCTCCTCCACGGACTCCCGCCGCA...ATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACACCCAAGCTCATATGTGCCTTTaGCCACAGCCACACGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVLPNSKEALSLAHTQAHMCL*PQPHGR Trigger: ACGACCGTGTGGCTGTGGTCAAAGGCACATATGAGC...TTGGGTGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR GCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCCGAGGGCCACTTGAGTaGCGAGCCCAGGCCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVRGPLE*RAQAKE Trigger: TTCTTTGGCCTGGGCTCGGCACTCAAGTGGCCCTCG...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTTTCTGGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCACCCACCAGCTGGGCTaGCACGTAGAAGATGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLSGMVLNCCELGTAFTITHQLG*HVEDGS Trigger: CGAGCCATCTTCTACGTGGCAGCCCAGCTGGTGGGT...GATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCCAGAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACCCAGTACAGGATGCCTaGTCCAGCAATGGCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSNAASPAERMLGRGAPNPVQDA*SSNGTH Trigger: GTGGGTGCCATTGCTGGAGCAGGCATCCTGTACTGG...GTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACCCACCACCACGGCCTTaGCTGGTGTTGTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSNAASPAERMLGRGAPNPPPRP*LVLCCC Trigger: GCAACAACACAACACCAGGCAAGGCCGTGGTGGTGG...GTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGCCACCACCACGGCCTTaGCTGGTGTTGTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLCLPGGRLWHMRYWVGEPPPRP*LVLCCC Trigger: GCAACAACACAACACCAGGCAAGGCCGTGGTGGTGG...CTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCACCCAGAAGACCCAGTaGGAGGGGCTGAACCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVTQKTQ*EGLNRF Trigger: GAATCGGTTCAGCCCCTCTCACTGGGTCTTCTGGGT...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGACCCAGAAGACCCAGTaGGAGGGGCTGAACCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QAMSPLSTWGKALAHEILTQKTQ*EGLNRF Trigger: GAATCGGTTCAGCCCCTCTCACTGGGTCTTCTGGGT...CAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTCTGGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCACCCAGAAGACCCAGTaGGAGGGGCTGAACCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSGMVLNCCELGTAFTITQKTQ*EGLNRF Trigger: GAATCGGTTCAGCCCCTCTCACTGGGTCTTCTGGGT...GATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCCAGAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS-3UTR GCA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGCAGAGAGATCTGGTTaGCTATTAAGAGGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPCAAWGSNAASPAERMLAERSG*LLRGPE Trigger: CTCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGC...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCCCAACCAGTACAGGATaGCTGCTCCAGCAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPAERMLGRGAPNSSSSPTSTG*LLQQWH Trigger: GTGCCATTGCTGGAGCAGGCATCCTGTACTGGTTGG...GGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGACCAACCAGTACAGGATaGCTGCTCCAGCAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALRQCPLCLPGGRLWHMRPTSTG*LLQQWH Trigger: GTGCCATTGCTGGAGCAGGCATCCTGTACTGGTTGG...TCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCGGGCCAAGGTACCTATaGCCAGGCCAAAGGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVGPRYL*PGQRLW Trigger: CCATAGCCTTTGGCCTGGCCATAGGTACCTTGGCCC...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACACCCAACTGCCACGTAGAAGATaGCTCGGAGCAGAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVLPNSKEALSLAHTQLPRRR*LGAERS Trigger: AGATCTCTCTGCTCCGAGCCATCTTCTACGTGGCAG...TTGGGTGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTCACCACGGCCTTGCCTaGTGTTGTGTTGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AASPAERMLGRGAPNSSSHHGLA*CCVVAE Trigger: CTCAGCAACAACACAACACCAGGCAAGGCCGTGGTG...AGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTTGCGGCGGGAGTCCGTaGAGGAGAAGATGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPAERMLGRGAPNSSSSFCGGSP*RRRCRG Trigger: CCCTCTGCATCTTCTCCTCCACGGACTCCCGCCGCA...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCGTGCCGTCAGCTCGATaGTCTTCTTCCGCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVVPSAR*SSSAPL Trigger: GAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCAC...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR TCA 90 bp | CTCGACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGACCCAGAAGACCCAGTaGGAGGGGCTGAACCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LDEPSISLLKSSQAMSPLTQKTQ*EGLNRF Trigger: GAATCGGTTCAGCCCCTCTCACTGGGTCTTCTGGGT...CAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTCCGCTCCTCTCTATaGTCTTCCCAGTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPAERMLGRGAPNSSSSFRSSL*SSQSSS Trigger: AGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAA...GGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTAGATCTGCAGAATGGTaGGCAGCGCCGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPAERMLGRGAPNSSSSFRSAEW*AAPRAT Trigger: AGTGGCCCTCGGCGCTGCCCACCATTCTGCAGATCT...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | CGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTACAGATCTGCAGAATGGTaGGCAGCGCCGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTIYLSPEELSGNVPSVYRSAEW*AAPRAT Trigger: AGTGGCCCTCGGCGCTGCCCACCATTCTGCAGATCT...GTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTCCAGGCCAAAGGCTATaGAGATCTGCAGAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AASPAERMLGRGAPNSSSPGQRL*RSAEWW Trigger: CCACCATTCTGCAGATCTCCATAGCCTTTGGCCTGG...AGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGACCAGGCCAAAGGCTATaGAGATCTGCAGAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRQCPLCLPGGRLWHMRPGQRL*RSAEWW Trigger: CCACCATTCTGCAGATCTCCATAGCCTTTGGCCTGG...TCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACCCAGGCCAAAGGCTATaGAGATCTGCAGAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSNAASPAERMLGRGAPNPGQRL*RSAEWW Trigger: CCACCATTCTGCAGATCTCCATAGCCTTTGGCCTGG...GTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTACCACAGGTCCCAGGGCTTaGGCCAAGGTACCTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPSISLLKSSQAMSPLSTTGPRA*AKVPMA Trigger: GGCCATAGGTACCTTGGCCCAAGCCCTGGGACCTGT...GGTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTCACCACGGCCTTGCCTaGTGTTGTGTTGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AMSPLSTWGKALAHEILGHHGLA*CCVVAE Trigger: CTCAGCAACAACACAACACCAGGCAAGGCCGTGGTG...ACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169082.3 |
||
| CDS-3UTR CCA 90 bp | GCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTATGCAGAGGGCCAGCTaGAAAGTCAAGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAWGSNAASPAERMLGRGMQRAS*KVKINS Trigger: GGAGTTAATCTTGACTTTCCAGCTGGCCCTCTGCAT...ACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAATGCAGAGGGCCAGCTaGAAAGTCAAGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPCAAWGSNAASPAERMLMQRAS*KVKINS Trigger: GGAGTTAATCTTGACTTTCCAGCTGGCCCTCTGCAT...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTAAGGCTATGGAGATCTaGAGAATGGTGGGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGRLWHMRYWVGEINRAKAMEI*RMVGSA Trigger: GGCGCTGCCCACCATTCTGCAGATCTCCATAGCCTT...AGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACGCAGAGAGATCTGGTTaGCTATTAAGAGGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSNAASPAERMLGRGAPNAERSG*LLRGPE Trigger: CTCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGC...GTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | GACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTCCAGTACAGGATGCCTaGTCCAGCAATGGCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DEPSISLLKSSQAMSPLSPVQDA*SSNGTH Trigger: GTGGGTGCCATTGCTGGAGCAGGCATCCTGTACTGG...AGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTCCACCACCACGGCCTTaGCTGGTGTTGTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAERMLGRGAPNSSSSFPPPRP*LVLCCC Trigger: GCAACAACACAACACCAGGCAAGGCCGTGGTGGTGG...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGAGATCTGCAGAATGGTaGGCAGCGCCGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WHMRYWVGEINRAITPFWRSAEW*AAPRAT Trigger: AGTGGCCCTCGGCGCTGCCCACCATTCTGCAGATCT...CCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGTGGAGATCTGCAGAATaGTGGGCAGCGCCGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAHEILGWRDKQGYHPFLWRSAE*WAAPRA Trigger: GGCCCTCGGCGCTGCCCACCATTCTGCAGATCTCCA...CAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGATAAACACAGGTCCCAGGGCTTaGGCCAAGGTACCTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPGGRLWHMRYWVGEINTGPRA*AKVPMA Trigger: GGCCATAGGTACCTTGGCCCAAGCCCTGGGACCTGT...GTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCCTGCCACGTAGAAGATaGCTCGGAGCAGAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVLPRRR*LGAERS Trigger: AGATCTCTCTGCTCCGAGCCATCTTCTACGTGGCAG...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGTGCGGCGGGAGTCCGTaGAGGAGAAGATGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHEILGWRDKQGYHPFLCGGSP*RRRCRG Trigger: CCCTCTGCATCTTCTCCTCCACGGACTCCCGCCGCA...CAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTGTGCCGTCAGCTCGATaGTCTTCTTCCGCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPAERMLGRGAPNSSSSFVPSAR*SSSAPL Trigger: GAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCAC...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTTTCCGCTCCTCTCTATaGTCTTCCCAGTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGRLWHMRYWVGEINRAFRSSL*SSQSSS Trigger: AGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAA...AGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169082.3 |
||
| CDS-3UTR GCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCGCAGAGAGATCTGGTTaGCTATTAAGAGGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVAERSG*LLRGPE Trigger: CTCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGC...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR GCA 90 bp | TCACAATCTCTGAGGTCTGAGCTGTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCAGTACAGGATGCCTaGTCCAGCAATGGCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLRSELWQSFCLIPKRPVQDA*SSNGTH Trigger: GTGGGTGCCATTGCTGGAGCAGGCATCCTGTACTGG...CCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGGGGCCAAGGTACCTATaGCCAGGCCAAAGGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HEILGWRDKQGYHPFLGWGPRYL*PGQRLW Trigger: CCATAGCCTTTGGCCTGGCCATAGGTACCTTGGCCC...CCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCTCTGAGGTCTTCCCAGTCCTCCTCTaGCTCATATGTGCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMVLNCCELGTAFTISEVFPVLL*LICAFD Trigger: GTCAAAGGCACATATGAGCCAGAGGAGGACTGGGAA...GACCTCAGAGATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR TCA 90 bp | CATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGGCTCATATGTGCCTTTaGCCACAGCCACACGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HEILGWRDKQGYHPFLGWAHMCL*PQPHGR Trigger: ACGACCGTGTGGCTGTGGTCAAAGGCACATATGAGC...CCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR GCA 90 bp | TCACAATCTCTGAGGTCTGAGCTGTGGCAGTCGTTCTGCCTAATTCCAAAGAGGAAGGCTATGGAGATCTaGAGAATGGTGGGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLRSELWQSFCLIPKRKAMEI*RMVGSA Trigger: GGCGCTGCCCACCATTCTGCAGATCTCCATAGCCTT...CCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGGCCAAGGTACCTATaGCCAGGCCAAAGGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHEILGWRDKQGYHPFLGPRYL*PGQRLW Trigger: CCATAGCCTTTGGCCTGGCCATAGGTACCTTGGCCC...CAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCTGGGATGGTCCTGAACTGCTGTGAGCTTGGCACTGCCTTCACAATCATGCAGAGGGCCAGCTaGAAAGTCAAGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSGMVLNCCELGTAFTIMQRAS*KVKINS Trigger: GGAGTTAATCTTGACTTTCCAGCTGGCCCTCTGCAT...GATTGTGAAGGCAGTGCCAAGCTCACAGCAGTTCAGGACCATCCCAGAAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATATTCCCAGTCCTCCTCTaGCTCATATGTGCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQAMSPLSTWGKALAHEIFPVLL*LICAFD Trigger: GTCAAAGGCACATATGAGCCAGAGGAGGACTGGGAA...TATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169082.3 |
||
| CDS-3UTR CCA 90 bp | AATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAGTGCCGTCAGCTCGATaGTCTTCTTCCGCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKMALDEPSISLLKSSQAVPSAR*SSSAPL Trigger: GAGAGGAGCGGAAGAAGACCATCGAGCTGACGGCAC...TGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTATT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169082.3 |
||
| CDS-3UTR TCA 90 bp | TCACAATCTCTGAGGTCTGAGCTGTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCTGCGAACACGGCCTTaGAGAAGGCAACTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SQSLRSELWQSFCLIPKRLRTRP*RRQLNT Trigger: TGTGTTCAGTTGCCTTCTTCAAGGCCGTGTTCGCAG...CCTCTTTGGAATTAGGCAGAACGACTGCCACAGCTCAGACCTCAGAGATTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR TCA 90 bp | AGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCTTTCCGCTCCTCTCTATaGTCTTCCCAGTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYWVGEINRAITPFWDGPFRSSL*SSQSSS Trigger: AGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAA...AGGACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCACCACGGCCTTGCCTaGTGTTGTGTTGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRYWVGEINRAITPFWDGHHGLA*CCVVAE Trigger: CTCAGCAACAACACAACACCAGGCAAGGCCGTGGTG...ACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR CCA 90 bp | GAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTCCTTCCCAGTCCTCCTCTaGCTCATATGTGCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EILGWRDKQGYHPFLGWSFPVLL*LICAFD Trigger: GTCAAAGGCACATATGAGCCAGAGGAGGACTGGGAA...GGACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGCCACCACCACGGCCTTaGCTGGTGTTGTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: INKMALDEPSISLLKSSQPPPRP*LVLCCC Trigger: GCAACAACACAACACCAGGCAAGGCCGTGGTGGTGG...CTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTATGCAGAGGGCCAGCTaGAAAGTCAAGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPAERMLGRGAPNSSSSFMQRAS*KVKINS Trigger: GGAGTTAATCTTGACTTTCCAGCTGGCCCTCTGCAT...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTAGCGCCGAGGGCCACTaGAGTGCCGAGCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPAERMLGRGAPNSSSSFSAEGH*SAEPRP Trigger: TGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGCT...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | CGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTACAGCGCCGAGGGCCACTaGAGTGCCGAGCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTIYLSPEELSGNVPSVYSAEGH*SAEPRP Trigger: TGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGCT...GTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTATCCACCACCACGGCCTaGCCTGGTGTTGTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPCAAWGSNAASPAERMLSTTTA*PGVVLL Trigger: CAACAACACAACACCAGGCAAGGCCGTGGTGGTGGA...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS CCA 90 bp | GTAATGGCCGGATTGATGTGGCCACCACTCACAGGTCCCAGGGCTTaGGCCAAGGTACCTATGGCCAGGCCAAAGGCTATGGAGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VMAGLMWPPLTGPRA*AKVPMARPKAMEIC Trigger: GCAGATCTCCATAGCCTTTGGCCTGGCCATAGGTACCTTGGCCCAAGCCCTGGGACCTGTGAGTGGTGGCCACATCAATCCGGCCATTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACACCCAAGGCTCATATGTGCCTTaGACCACAGCCACACGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VAVVLPNSKEALSLAHTQGSYVP*TTATRS Trigger: CGACCGTGTGGCTGTGGTCAAAGGCACATATGAGCC...TTGGGTGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS GCA 90 bp | AGAGGGCCAGCTGGAAAGTCAAGATTAACTCCACCACCACGGCCTTaGCTGGTGTTGTGTTGTTGCGCATTGACGGCCAGGTTACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGPAGKSRLTPPPRP*LVLCCCALTARLPR Trigger: CCGGGGTAACCTGGCCGTCAATGCGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAATCTTGACTTTCCAGCTGGCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | AATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAAGCGCCGAGGGCCACTaGAGTGCCGAGCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NKMALDEPSISLLKSSQASAEGH*SAEPRP Trigger: TGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGCT...TGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAAGAGTAATGGCCGGATaGATGTGGCCACCACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPCAAWGSNAASPAERMLRVMAG*MWPPLT Trigger: TGTGAGTGGTGGCCACATCAATCCGGCCATTACTCT...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTTTGCCTGGTGTTGTGTaGTTGCTGAGCGCATTGACG | + |
|
Preference number: 5 (lower is better) Translates to: AAWGSNAASPAERMLGRGLPGVV*LLSALT Trigger: CGTCAATGCGCTCAGCAACAACACAACACCAGGCAA...ACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTAGTAGAAGTAGAGGATaGCAGCCAGGACGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AASPAERMLGRGAPNSSSSRSRG*QPGRPP Trigger: TGGGGGCCGTCCTGGCTGCAATCCTCTACTTCTACT...AGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCGGCTCATATGTGCCTTaGACCACAGCCACACGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASPAERMLGRGAPNSSSSGSYVP*TTATRS Trigger: CGACCGTGTGGCTGTGGTCAAAGGCACATATGAGCC...GGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS TCA 90 bp | CCTCTCTATGATCTTCCCAGTCCTCCTCTGGCTCATATGTGCCTTTaGCCACAGCCACACGGTCGTGGAGGCTCAGCGAGGAGGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLYDLPSPPLAHMCL*PQPHGRGGSARRGK Trigger: TTTTCCCCTCCTCGCTGAGCCTCCACGACCGTGTGGCTGTGGTCAAAGGCACATATGAGCCAGAGGAGGACTGGGAAGATCATAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTCGTTCTGCCTAATTCCAAAGAGGCCCTGTCCCTGGCCCACACCCAATCTGCGAACACGGCCTaGAAGAAGGCAACTGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVLPNSKEALSLAHTQSANTA*KKATEH Trigger: GTGTTCAGTTGCCTTCTTCAAGGCCGTGTTCGCAGA...TTGGGTGTGGGCCAGGGACAGGGCCTCTTTGGAATTAGGCAGAACGACTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTAGGGAGAGGTAGCAGAGAGATCTGGTaGCCTATTAAGAGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAWGSNAASPAERMLGRGSREIW*PIKRAR Trigger: TCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGCT...ACCTCTCCCTAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGTCCACCACCACGGCCTaGCCTGGTGTTGTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QAMSPLSTWGKALAHEILSTTTA*PGVVLL Trigger: CAACAACACAACACCAGGCAAGGCCGTGGTGGTGGA...CAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGGGCTCATATGTGCCTTaGACCACAGCCACACGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MSPLSTWGKALAHEILGWGSYVP*TTATRS Trigger: CGACCGTGTGGCTGTGGTCAAAGGCACATATGAGCC...CCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169082.3 |
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| CDS-3UTR CAA 90 bp | TCCCCGTGTGCGGCATGGGGATCCAATGCTGCCTCTCCAGCTGAGAGGATGCTATTGCCTGGTGTTGTGTaGTTGCTGAGCTCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SPCAAWGSNAASPAERMLLPGVV*LLSSFF Trigger: GAAGAAGGAGCTCAGCAACAACACAACACCAGGCAA...TAGCATCCTCTCAGCTGGAGAGGCAGCATTGGATCCCCATGCCGCACACGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231163.2 |
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| CDS CCA 90 bp | ATCTGGTTGCCTATTAAGAGGGCCAGAGTAATGGCCGGATTGATGTaGCCACCACTCACAGGTCCCAGGGCTTGGGCCAAGGTACCTATG | + |
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Preference number: 5 (lower is better) Translates to: IWLPIKRARVMAGLM*PPLTGPRAWAKVPM Trigger: CATAGGTACCTTGGCCCAAGCCCTGGGACCTGTGAGTGGTGGCCACATCAATCCGGCCATTACTCTGGCCCTCTTAATAGGCAACCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS CCA 90 bp | GATGGTCTTCTTCCGCTCCTCTCTATGATCTTCCCAGTCCTCCTCTaGCTCATATGTGCCTTTGACCACAGCCACACGGTCGTGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: DGLLPLLSMIFPVLL*LICAFDHSHTVVEA Trigger: AGCCTCCACGACCGTGTGGCTGTGGTCAAAGGCACATATGAGCCAGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAAGAAGACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000231163.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGGCAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATATCCACCACCACGGCCTaGCCTGGTGTTGTGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SQAMSPLSTWGKALAHEISTTTA*PGVVLL Trigger: CAACAACACAACACCAGGCAAGGCCGTGGTGGTGGA...TATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTGGAAGAGTAATGGCCGGATaGATGTGGCCACCACTCACA | + |
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Preference number: 5 (lower is better) Translates to: CPLCLPGGRLWHMRYWVGRVMAG*MWPPLT Trigger: TGTGAGTGGTGGCCACATCAATCCGGCCATTACTCT...TCCAACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CAA 90 bp | TCTCCAGCTGAGAGGATGCTAGGGAGAGGTGCTCCAAACTCTTCGTCTTCCTTTTCCACCACCACGGCCTaGCCTGGTGTTGTGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SPAERMLGRGAPNSSSSFSTTTA*PGVVLL Trigger: CAACAACACAACACCAGGCAAGGCCGTGGTGGTGGA...AAAGGAAGACGAAGAGTTTGGAGCACCTCTCCCTAGCATCCTCTCAGCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS-3UTR CAA 90 bp | CAATGTCCCCTCTGTCTACCTGGGGGAAGGCTTTGGCACATGAGATACTGGGTTTCTGCGAACACGGCCTaGAAGAAGGCAACTGAACAC | + |
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Preference number: 5 (lower is better) Translates to: QCPLCLPGGRLWHMRYWVSANTA*KKATEH Trigger: GTGTTCAGTTGCCTTCTTCAAGGCCGTGTTCGCAGA...AACCCAGTATCTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CAA 90 bp | CGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTACTTGCCTGGTGTTGTGTaGTTGCTGAGCGCATTGACG | + |
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Preference number: 5 (lower is better) Translates to: RTIYLSPEELSGNVPSVYLPGVV*LLSALT Trigger: CGTCAATGCGCTCAGCAACAACACAACACCAGGCAA...GTAGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169082.3 |
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| CDS-3UTR CAA 90 bp | ATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGATGGTAGTAGAAGTAGAGGATaGCAGCCAGGACGGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: MRYWVGEINRAITPFWDGSRSRG*QPGRPP Trigger: TGGGGGCCGTCCTGGCTGCAATCCTCTACTTCTACT...ACCATCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS-3UTR CAA 90 bp | GCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGGGAAGAGTAATGGCCGGATaGATGTGGCCACCACTCACA | + |
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Preference number: 5 (lower is better) Translates to: AHEILGWRDKQGYHPFLGRVMAG*MWPPLT Trigger: TGTGAGTGGTGGCCACATCAATCCGGCCATTACTCT...TCCCAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CAA 90 bp | GACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGGCAATGTCCCCTCTGTCTAGCAGAGAGATCTGGTaGCCTATTAAGAGGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: DEPSISLLKSSQAMSPLSSREIW*PIKRAR Trigger: TCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGCT...AGACAGAGGGGACATTGCCTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CAA 90 bp | ATAAATAAGATGGCACTCGACGAACCATCTATCTCTCTCCTGAAGAGCTCTCAGAGTAGAAGTAGAGGATaGCAGCCAGGACGGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: INKMALDEPSISLLKSSQSRSRG*QPGRPP Trigger: TGGGGGCCGTCCTGGCTGCAATCCTCTACTTCTACT...CTGAGAGCTCTTCAGGAGAGAGATAGATGGTTCGTCGAGTGCCATCTTATTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS-3UTR CAA 90 bp | TTGGCACATGAGATACTGGGTTGGAGAGATAAACAGGGCTATCACCCCTTTCTGAGCAGAGAGATCTGGTaGCCTATTAAGAGGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LAHEILGWRDKQGYHPFLSREIW*PIKRAR Trigger: TCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGCT...CAGAAAGGGGTGATAGCCCTGTTTATCTCTCCAACCCAGTATCTCATGTGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS CAA 72 bp | CCACCACGGCCTTGCCTGGTGTTGTGTTGTTGCGCATaGACGGCCAGGTTACCCCGGGCATTGCCTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PPRPCLVLCCCA*TARLPRALPGA Trigger: GGCGCCAGGCAATGCCCGGGGTAACCTGGCCGTCAATGCGCAACAACACAACACCAGGCAAGGCCGTGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS CCA 72 bp | ACAAGCCAATGGATAAGGCTGGGGAGCCCACCGGGCTaGTGCGGCGGGAGTCCGTGGAGGAGAAGATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TSQWIRLGSPPG*CGGSPWRRRCR Trigger: TCTGCATCTTCTCCTCCACGGACTCCCGCCGCACCAGCCCGGTGGGCTCCCCAGCCTTATCCATTGGCTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 ENSMUST00000231163.2 |
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| CDS CAA 72 bp | ACGGCCTTGCCTGGTGTTGTGTTGTTGCTGAGCGCATaGACGGCCAGGTTACCCCGGGCATTGCCTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: TALPGVVLLLSA*TARLPRALPGA Trigger: GGCGCCAGGCAATGCCCGGGGTAACCTGGCCGTCAATGCGCTCAGCAACAACACAACACCAGGCAAGGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 |
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| CDS CCA 72 bp | CTTGGGCCAAGGTACCTATGGCCAGGCCAAAGGCTATaGAGATCTGCAGAATGGTGGGCAGCGCCGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGPRYLWPGQRL*RSAEWWAAPRA Trigger: GGCCCTCGGCGCTGCCCACCATTCTGCAGATCTCCATAGCCTTTGGCCTGGCCATAGGTACCTTGGCCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS CCA 72 bp | GAGCGCATTGACGGCCAGGTTACCCCGGGCATTGCCTaGCGCCAACCAGTACAGGATGCCTGCTCCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ERIDGQVTPGIA*RQPVQDACSSN Trigger: ATTGCTGGAGCAGGCATCCTGTACTGGTTGGCGCCAGGCAATGCCCGGGGTAACCTGGCCGTCAATGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 |
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| CDS CCA 72 bp | TTGCGCATTGACGGCCAGGTTACCCCGGGCATTGCCTaGCGCCAACCAGTACAGGATGCCTGCTCCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LRIDGQVTPGIA*RQPVQDACSSN Trigger: ATTGCTGGAGCAGGCATCCTGTACTGGTTGGCGCCAGGCAATGCCCGGGGTAACCTGGCCGTCAATGCGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS CAA 90 bp | AGTAATGGCCGGATTGATGTGGCCACCACTCACAGGTCCCAGGGCTaGGGCCAAGGTACCTATGGCCAGGCCAAAGGCTATGGAGATCTG | + |
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Preference number: 6 (lower is better) Translates to: SNGRIDVATTHRSQG*GQGTYGQAKGYGDL Trigger: CAGATCTCCATAGCCTTTGGCCTGGCCATAGGTACCTTGGCCCAAGCCCTGGGACCTGTGAGTGGTGGCCACATCAATCCGGCCATTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS CAA 90 bp | CAGAGGGCCAGCTGGAAAGTCAAGATTAACTCCACCACCACGGCCTaGCCTGGTGTTGTGTTGTTGCGCATTGACGGCCAGGTTACCCCG | + |
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Preference number: 6 (lower is better) Translates to: QRASWKVKINSTTTA*PGVVLLRIDGQVTP Trigger: CGGGGTAACCTGGCCGTCAATGCGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAATCTTGACTTTCCAGCTGGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS CAA 72 bp | ATTAACTCCACCACCACGGCCTTGCCTGGTGTTGTGTaGTTGCTGAGCGCATTGACGGCCAGGTTACCCCGG | + |
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Preference number: 6 (lower is better) Translates to: INSTTTALPGVV*LLSALTARLPR Trigger: CCGGGGTAACCTGGCCGTCAATGCGCTCAGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 |
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| CDS CAA 72 bp | TGGTTGCCTATTAAGAGGGCCAGAGTAATGGCCGGATaGATGTGGCCACCACTCACAGGTCCCAGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WLPIKRARVMAG*MWPPLTGPRAW Trigger: CCAAGCCCTGGGACCTGTGAGTGGTGGCCACATCAATCCGGCCATTACTCTGGCCCTCTTAATAGGCAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS CAA 72 bp | TCAAGATTAACTCCACCACCACGGCCTTGCCTGGTGTaGTGTTGTTGCGCATTGACGGCCAGGTTACCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SRLTPPPRPCLV*CCCALTARLPR Trigger: CCGGGGTAACCTGGCCGTCAATGCGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAATCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS CAA 90 bp | AGAGAGATCTGGTTGCCTATTAAGAGGGCCAGAGTAATGGCCGGATaGATGTGGCCACCACTCACAGGTCCCAGGGCTTGGGCCAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: REIWLPIKRARVMAG*MWPPLTGPRAWAKV Trigger: TACCTTGGCCCAAGCCCTGGGACCTGTGAGTGGTGGCCACATCAATCCGGCCATTACTCTGGCCCTCTTAATAGGCAACCAGATCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088200.13 ENSMUST00000169082.3 ENSMUST00000229728.2 |
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| CDS GCA 72 bp | GCTGGAAAGTCAAGATTAACTCCACCACCACGGCCTTaGCTGGTGTTGTGTTGTTGCGCATTGACGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AGKSRLTPPPRP*LVLCCCALTAR Trigger: CCTGGCCGTCAATGCGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAATCTTGACTTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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| CDS CAA 72 bp | AGCTGGAAAGTCAAGATTAACTCCACCACCACGGCCTaGCCTGGTGTTGTGTTGTTGCGCATTGACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SWKVKINSTTTA*PGVVLLRIDGQ Trigger: CTGGCCGTCAATGCGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAATCTTGACTTTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229728.2 |
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