Pregenerated sensors for AQP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023013Ensembl transcript IDs: ENSMUST00000023752.6
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GATGGACGAGCACTTTTACACCCTAATAAAATTAGATGCACTAACCACAGACCCGAGCTCGAGGGTAGCTaGGGCCAGGGCTTCGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: DGRALLHPNKIRCTNHRPELEGS*GQGFGA Trigger: GGCCCCGAAGCCCTGGCCCCAGCTACCCTCGAGCTC...GGGTCTGTGGTTAGTGCATCTAATTTTATTAGGGTGTAAAAGTGCTCGTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGATGGACGAGCACTTTTACACCCTAATAAAATTAGATGCACTAACCACATCTCCGTCTCCCCACTaGCACGATCCCCAAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: AEMDEHFYTLIKLDALTTSPSPH*HDPQVS Trigger: AGACACTTGGGGATCGTGGCAGTGGGGAGACGGAGA...TGTGGTTAGTGCATCTAATTTTATTAGGGTGTAAAAGTGCTCGTCCATCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| 3UTR CCA 72 bp | CGCTCGCAGGCGCAGGAGCAGCTAGCTACCCTGCACTaGGAACCGACGGCGGGCCAGGGAGAGGGAGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RSQAQEQLATLH*EPTAGQGEGGG Trigger: GCCCCCTCCCTCTCCCTGGCCCGCCGTCGGTTCCCAGTGCAGGGTAGCTAGCTGCTCCTGCGCCTGCGAGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| 3UTR CCA 72 bp | GTCTGGTTCCCTGCAAGGGGCGAGCTCGAGGGTAGCTaGGGCCAGGGCTTCGGGGCCGAGGTACTGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: VWFPARGELEGS*GQGFGAEVLPG Trigger: ACCTGGCAGTACCTCGGCCCCGAAGCCCTGGCCCCAGCTACCCTCGAGCTCGCCCCTTGCAGGGAACCAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| 3UTR TCA 72 bp | TCGGGGTCACCCTCAGGAACATGCAGTCTCTGCACGTaGGGAAAGAAACACGCAGAGATGGACGAGCACTTT | + |
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Preference number: 3 (lower is better) Translates to: SGSPSGTCSLCT*GKKHAEMDEHF Trigger: AAAGTGCTCGTCCATCTCTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGACCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | GTGGTCTCTATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCAGAGCTCTCCTGCAGCTCCACCGACTaGCGCCGCCGCACTTCGCGT | + |
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Preference number: 4 (lower is better) Translates to: VVSMHLSLGTRAGSPELSCSSTD*RRRTSR Trigger: ACGCGAAGTGCGGCGGCGGCAGTCGGTGGAGCTGCA...GGAGAGCTCTGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATAGAGACCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | GGTCTCTATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCAGAGCTCTCCGTGCCAGTGACAACTGCTaGAGCCAGGGAGCGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLYAPLPRHQSGLSRALRASDNC*SQGAGW Trigger: CCAGCCCGCTCCCTGGCTCCAGCAGTTGTCACTGGC...ACGGAGAGCTCTGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATAGAGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR TCA 90 bp | GTGGTCTCTATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCAGAGCTCTCCGGCCCACTGGAGGGCTaGGCCAAGGCCAAAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VVSMHLSLGTRAGSPELSGPLEG*AKAKED Trigger: GTCTTCTTTGGCCTTGGCTCAGCCCTCCAGTGGGCC...GGAGAGCTCTGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATAGAGACCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR TCA 90 bp | ACGGGCACTCGGGGTCACCCTCAGGAACATGCAGTCTCTGCACGTGAGGAAAGAAGAGGAGGGAACCGATaGCGGCGCCCACCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TGTRGHPQEHAVSAREERRGGNR*RRPPGV Trigger: GACCCCTGGTGGGCGCCGTCATCGGTTCCCTCCTCT...TCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGACCCCGAGTGCCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR TCA 90 bp | ACTCGGGGTCACCCTCAGGAACATGCAGTCTCTGCACGTGAGGAAAGAAACACGCCGGCTCCAGGCCCTTaGGCACCGCCAGGCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TRGHPQEHAVSAREERNTPAPGP*APPGAP Trigger: AGGAGCGCCTGGCGGTGCTCAAGGGCCTGGAGCCGG...CGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGACCCCGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGGGTGGTCTCTATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCAGAACCAGGGTGCCAATaGCCAGACCAAAGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LSRVVSMHLSLGTRAGSPEPGCQ*PDQRPR Trigger: CCGTGGCCTTTGGTCTGGGCATTGGCACCCTGGTTC...TGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATAGAGACCACCCTGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | ACTCGGGGTCACCCTCAGGAACATGCAGTCTCTGCACGTGAGGAAAGAAACACGCCGCGCGGCAGGCTCTaGGGAGAGTGCAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TRGHPQEHAVSAREERNTPRGRL*GECSST Trigger: GGTGGAGCTGCACTCTCCGCAGAGCCTGCCGCGCGG...CGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGACCCCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | GTGGTCTCTATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCAGAGCTCTCCAAGGCCACGGCAATCTaGAGCACAGAGGGTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VVSMHLSLGTRAGSPELSKATAI*STEGGE Trigger: CTCCCCACCCTCTGTGCTCCAGATTGCCGTGGCCTT...GGAGAGCTCTGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATAGAGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR TCA 90 bp | CGGGGTCACCCTCAGGAACATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGACATGGCCCAGAGCCTaGACCAGGGTGCCAATGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGHPQEHAVSAREERNTQTWPRA*TRVPMP Trigger: GGGCATTGGCACCCTGGTTCAGGCTCTGGGCCATGT...CTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGGGTGGTCTCTATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCACGCCTGGCCGGCTGTTaGATTGTTGTGGAGAGCATT | + |
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Preference number: 4 (lower is better) Translates to: LSRVVSMHLSLGTRAGSPRLAGC*IVVESI Trigger: AATGCTCTCCACAACAATGCAACAGCCGGCCAGGCG...TGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATAGAGACCACCCTGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | TTTATTGCAGGTACAGGAGGGGAAGGCCAAAGCAAGAATGAAAGTCCCCCGCCCACCGCCAGGCGCTCCTaGAGGCTCTTGGTCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: FIAGTGGEGQSKNESPPPTARRS*RLLVEG Trigger: CCCCTCGACCAAGAGCCTGCAGGAGCGCCTGGCGGT...GGGCGGGGGACTTTCATTCTTGCTTTGGCCTTCCCCTCCTGTACCTGCAATAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | CGGGGTCACCCTCAGGAACATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGGCTCCTGCAGGCTCTTaGTCGAGGGGAACAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RGHPQEHAVSAREERNTQAPAGS*SRGTAG Trigger: ACCTGCTGTTCCCCTCGACCAAGAGCCTGCAGGAGC...CTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGACCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR TCA 90 bp | TTTATTGCAGGTACAGGAGGGGAAGGCCAAAGCAAGAATGAAAGTCCCCCGCCCTGTTGTGGAGAGCATTaGCAGCCAGGTCCCCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FIAGTGGEGQSKNESPPPCCGEH*QPGPRG Trigger: TCCGCGGGGACCTGGCTGTCAATGCTCTCCACAACA...GGGCGGGGGACTTTCATTCTTGCTTTGGCCTTCCCCTCCTGTACCTGCAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | ATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGAGATGGACGAGCACTTTTAGGGGAGCTGGCCCACTaGAGGGCTGAGCCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: MQSLHVRKETRRDGRALLGELAH*RAEPRP Trigger: TGGCCTTGGCTCAGCCCTCCAGTGGGCCAGCTCCCC...TAAAAGTGCTCGTCCATCTCTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | ATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGAGATGGACGAGCACTTTTAAGGCTCTGCGGAGAGTaGAGCTCCACCGACTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: MQSLHVRKETRRDGRALLRLCGE*SSTDCR Trigger: GCGGCAGTCGGTGGAGCTGCACTCTCCGCAGAGCCT...TAAAAGTGCTCGTCCATCTCTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | CATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGAGATGGACGAGCACTTTTCGAAGGAAGGAGACATaGCAACCCACCAGGCACGCC | + |
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Preference number: 4 (lower is better) Translates to: HAVSAREERNTQRWTSTFRRKET*QPTRHA Trigger: GGCGTGCCTGGTGGGTTGCCATGTCTCCTTCCTTCG...AAAAGTGCTCGTCCATCTCTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | GATGGACGAGCACTTTTACACCCTAATAAAATTAGATGCACTAACCACAGACCCCTTGCCAGTGACAACTaGTGGAGCCAGGGAGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: DGRALLHPNKIRCTNHRPLASDN*WSQGAG Trigger: GCCCGCTCCCTGGCTCCAGCAGTTGTCACTGGCAAG...GGGTCTGTGGTTAGTGCATCTAATTTTATTAGGGTGTAAAAGTGCTCGTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | AAACACGCAGAGATGGACGAGCACTTTTACACCCTAATAAAATTAGATGCACTACAGAGGGTGGGGAGCTaGCCCACTGGAGGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KHAEMDEHFYTLIKLDALQRVGS*PTGGLS Trigger: GCTCAGCCCTCCAGTGGGCCAGCTCCCCACCCTCTG...TAGTGCATCTAATTTTATTAGGGTGTAAAAGTGCTCGTCCATCTCTGCGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CCA 90 bp | GTCACCCTCAGGAACATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGAGATGCTGTTGCATTGTTGTaGAGAGCATTGACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VTLRNMQSLHVRKETRRDAVALL*RALTAR Trigger: CCTGGCTGTCAATGCTCTCCACAACAATGCAACAGC...ATCTCTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTCCTGAGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR TCA 90 bp | GAAGTGGATTTATTGCAGGTACAGGAGGGGAAGGCCAAAGCAAGAATGAAAGTCCATCAAACTTGCCAGTaGCAACTGCTGGAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EVDLLQVQEGKAKARMKVHQTCQ*QLLEPG Trigger: CCCTGGCTCCAGCAGTTGTCACTGGCAAGTTTGATG...GACTTTCATTCTTGCTTTGGCCTTCCCCTCCTGTACCTGCAATAAATCCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | AAACACGCAGAGATGGACGAGCACTTTTACACCCTAATAAAATTAGATGCACTAGAGCCTGAACCAGGGTaGCAATGCCCAGACCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: KHAEMDEHFYTLIKLDALEPEPG*QCPDQR Trigger: CCTTTGGTCTGGGCATTGGCACCCTGGTTCAGGCTC...TAGTGCATCTAATTTTATTAGGGTGTAAAAGTGCTCGTCCATCTCTGCGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR GCA 90 bp | AAACACGCAGAGATGGACGAGCACTTTTACACCCTAATAAAATTAGATGCACTAATGCACAGCACCAGCTaGATGGTCAGGAAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KHAEMDEHFYTLIKLDALMHSTS*MVRKSS Trigger: GGAGCTCTTCCTGACCATGCAGCTGGTGCTGTGCAT...TAGTGCATCTAATTTTATTAGGGTGTAAAAGTGCTCGTCCATCTCTGCGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS GCA 90 bp | TTGCTGCCGCGCGGCAGGCTCTGCGGAGAGTGCAGCTCCACCGACTaGCGCCGCCGCACTTCGCGTTCCTCCCAGTCAGTGTCCGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLPRGRLCGECSSTD*RRRTSRSSQSVSGS Trigger: GGAGCCGGACACTGACTGGGAGGAACGCGAAGTGCGGCGGCGGCAGTCGGTGGAGCTGCACTCTCCGCAGAGCCTGCCGCGCGGCAGCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS TCA 90 bp | GCCGCACTTCGCGTTCCTCCCAGTCAGTGTCCGGCTCCAGGCCCTTaGGCACCGCCAGGCGCTCCTGCAGGCTCTTGGTCGAGGGGAACA | + |
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Preference number: 5 (lower is better) Translates to: AALRVPPSQCPAPGP*APPGAPAGSWSRGT Trigger: TGTTCCCCTCGACCAAGAGCCTGCAGGAGCGCCTGGCGGTGCTCAAGGGCCTGGAGCCGGACACTGACTGGGAGGAACGCGAAGTGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CAA 90 bp | TATGCACCTCTCCCTAGGCACCAGAGCGGGCTCTCCAGAGCTCTCCGTCTCCCCACAGTCACAGCAGGGTaGATGTGGGCCCCGCTGACA | + |
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Preference number: 5 (lower is better) Translates to: YAPLPRHQSGLSRALRLPTVTAG*MWAPLT Trigger: TGTCAGCGGGGCCCACATCAACCCTGCTGTGACTGT...GGGGAGACGGAGAGCTCTGGAGAGCCCGCTCTGGTGCCTAGGGAGAGGTGCATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS-3UTR CAA 90 bp | GAACATGCAGTCTCTGCACGTGAGGAAAGAAACACGCAGAGATGGACGAGCACTTTGTTGTGGAGAGCATaGACAGCCAGGTCCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: EHAVSAREERNTQRWTSTLLWRA*TARSPR Trigger: CCGCGGGGACCTGGCTGTCAATGCTCTCCACAACAA...AGTGCTCGTCCATCTCTGCGTGTTTCTTTCCTCACGTGCAGAGACTGCATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS GCA 72 bp | CGCGGCAGGCTCTGCGGAGAGTGCAGCTCCACCGACTaGCGCCGCCGCACTTCGCGTTCCTCCCAGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RGRLCGECSSTD*RRRTSRSSQSV Trigger: CACTGACTGGGAGGAACGCGAAGTGCGGCGGCGGCAGTCGGTGGAGCTGCACTCTCCGCAGAGCCTGCCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS CAA 90 bp | CGCCGCACTTCGCGTTCCTCCCAGTCAGTGTCCGGCTCCAGGCCCTaGAGCACCGCCAGGCGCTCCTGCAGGCTCTTGGTCGAGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RRTSRSSQSVSGSRP*STARRSCRLLVEGN Trigger: GTTCCCCTCGACCAAGAGCCTGCAGGAGCGCCTGGCGGTGCTCAAGGGCCTGGAGCCGGACACTGACTGGGAGGAACGCGAAGTGCGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS GCA 72 bp | CAGGAAGAGCTCCACAGTCACCGCCTGGCCGGCTGTTaGATTGTTGTGGAGAGCATTGACAGCCAGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: QEELHSHRLAGC*IVVESIDSQVP Trigger: GGGGACCTGGCTGTCAATGCTCTCCACAACAATGCAACAGCCGGCCAGGCGGTGACTGTGGAGCTCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS CCA 72 bp | TCCACAGTCACCGCCTGGCCGGCTGTTGCATTGTTGTaGAGAGCATTGACAGCCAGGTCCCCGCGGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: STVTAWPAVALL*RALTARSPRIS Trigger: AGAAATCCGCGGGGACCTGGCTGTCAATGCTCTCCACAACAATGCAACAGCCGGCCAGGCGGTGACTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS CAA 72 bp | ACCGCCTGGCCGGCTGTTGCATTGTTGTGGAGAGCATaGACAGCCAGGTCCCCGCGGATTTCTACAGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TAWPAVALLWRA*TARSPRISTGV Trigger: TACCCCTGTAGAAATCCGCGGGGACCTGGCTGTCAATGCTCTCCACAACAATGCAACAGCCGGCCAGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS CAA 90 bp | TCCACAGTCACCGCCTGGCCGGCTGTTGCATTGTTGTGGAGAGCATaGACAGCCAGGTCCCCGCGGATTTCTACAGGGGTAATCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: STVTAWPAVALLWRA*TARSPRISTGVISW Trigger: CCATGAGATTACCCCTGTAGAAATCCGCGGGGACCTGGCTGTCAATGCTCTCCACAACAATGCAACAGCCGGCCAGGCGGTGACTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS CCA 72 bp | AGCTGCATGGTCAGGAAGAGCTCCACAGTCACCGCCTaGCCGGCTGTTGCATTGTTGTGGAGAGCATTGACA | + |
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Preference number: 6 (lower is better) Translates to: SCMVRKSSTVTA*PAVALLWRALT Trigger: TGTCAATGCTCTCCACAACAATGCAACAGCCGGCCAGGCGGTGACTGTGGAGCTCTTCCTGACCATGCAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS TCA 72 bp | CGATCCAGAAGACCCAGTGATCATCAAACTTGCCAGTaGCAACTGCTGGAGCCAGGGAGCGGGCTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: RSRRPSDHQTCQ*QLLEPGSGLDS Trigger: TGAATCCAGCCCGCTCCCTGGCTCCAGCAGTTGTCACTGGCAAGTTTGATGATCACTGGGTCTTCTGGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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| CDS GCA 72 bp | GAAGACCCAGTGATCATCAAACTTGCCAGTGACAACTaGTGGAGCCAGGGAGCGGGCTGGATTCATGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: EDPVIIKLASDN*WSQGAGWIHGA Trigger: TGCTCCATGAATCCAGCCCGCTCCCTGGCTCCAGCAGTTGTCACTGGCAAGTTTGATGATCACTGGGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023752.6 |
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