Pregenerated sensors for AQP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004655Ensembl transcript IDs: ENSMUST00000004774.4
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAGATACAAGGTCCTGGTTCACAATGGCCAGAACCAGGTGGGATaGGCCTGCCCTGCCCCTCTCCAGCAAAGCTCTCACCACCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: DRYKVLVHNGQNQVG*ACPAPLQQSSHHLH Trigger: GTGGAGGTGGTGAGAGCTTTGCTGGAGAGGGGCAGGGCAGGCCCATCCCACCTGGTTCTGGCCATTGTGAACCAGGACCTTGTATCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR TCA 90 bp | GCATTGGGCCAATGCAGAGAGAAGACTGTGCCTGGAGGCACAGAGTaGGCCTCTGCAGATTGTCCAGGCTCCGGTCACACTCATCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ALGQCREKTVPGGTE*ASADCPGSGHTHPA Trigger: GGCTGGATGAGTGTGACCGGAGCCTGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGGCACAGTCTTCTCTCTGCATTGGCCCAATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 90 bp | AAGAAACATACACAGAGCAGACAGATACAAGGTCCTGGTTCACAATaGCCAGAACCAGGTGGGATGGGCCTGCCCTGCCCCTCTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: KKHTQSRQIQGPGSQ*PEPGGMGLPCPSPA Trigger: TGCTGGAGAGGGGCAGGGCAGGCCCATCCCACCTGGTTCTGGCCATTGTGAACCAGGACCTTGTATCTGTCTGCTCTGTGTATGTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR TCA 90 bp | CCAGTGGTCAGTGGCCTCCTGACTCTTCTGCTGCTTCTAAGCACCTaGAGAATGTGGCTCTCGGTTCACAATGTGGTTAAGGGCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: PVVSGLLTLLLLLST*RMWLSVHNVVKGTV Trigger: CACTGTGCCCTTAACCACATTGTGAACCGAGAGCCACATTCTTCAGGTGCTTAGAAGCAGCAGAAGAGTCAGGAGGCCACTGACCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 90 bp | TTCAATTGCAAAGAAACATACACAGAGCAGACAGATACAAGGTCCTaGTTCACAATGGCCAGAACCAGGTGGGATGGGCCTGCCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: FNCKETYTEQTDTRS*FTMARTRWDGPALP Trigger: GGGCAGGGCAGGCCCATCCCACCTGGTTCTGGCCATTGTGAACCAGGACCTTGTATCTGTCTGCTCTGTGTATGTTTCTTTGCAATTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR GCA 90 bp | TGTGGCATGTCCACACTTACAGAATCCCCAAAGCTGTCCCTTCCTTaGCACTTTACAGATGTGATCACTGAGGCCTCAGCACAGGGACAA | + |
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Preference number: 1 (lower is better) Translates to: CGMSTLTESPKLSLP*HFTDVITEASAQGQ Trigger: TTGTCCCTGTGCTGAGGCCTCAGTGATCACATCTGTAAAGTGGCAAGGAAGGGACAGCTTTGGGGATTCTGTAAGTGTGGACATGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 90 bp | GTTAAGGGCACAGTGGTAGAGCCACTCTGGATTGATGGGATCCAATaGAATGACCTAGAGCTAAATGCAACCCCTGAGCTGACTGCACTC | + |
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Preference number: 1 (lower is better) Translates to: VKGTVVEPLWIDGIQ*NDLELNATPELTAL Trigger: GAGTGCAGTCAGCTCAGGGGTTGCATTTAGCTCTAGGTCATTCCATTGGATCCCATCAATCCAGAGTGGCTCTACCACTGTGCCCTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 90 bp | ATTACTGCCCCAGACAAGGCTAGACCATGTGGGTCAGGCAGGTCTTaGGGAGTGACTTTGGTCAGCTTGTCAGAGTGTCTACAATATGAT | + |
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Preference number: 1 (lower is better) Translates to: ITAPDKARPCGSGRS*GVTLVSLSECLQYD Trigger: ATCATATTGTAGACACTCTGACAAGCTGACCAAAGTCACTCCCCAAGACCTGCCTGACCCACATGGTCTAGCCTTGTCTGGGGCAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 90 bp | CTCTCGGTTCACAATGTGGTTAAGGGCACAGTGGTAGAGCCACTCTaGATTGATGGGATCCAATGGAATGACCTAGAGCTAAATGCAACC | + |
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Preference number: 1 (lower is better) Translates to: LSVHNVVKGTVVEPL*IDGIQWNDLELNAT Trigger: GGTTGCATTTAGCTCTAGGTCATTCCATTGGATCCCATCAATCCAGAGTGGCTCTACCACTGTGCCCTTAACCACATTGTGAACCGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTACAGTGTCTGCTAGGGAACGGAGACGAGTGTGCAGCTGTGATATGCCACCTGGAGGCACAGAGTaGGCCTCTGCAGATTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VGTVSARERRRVCSCDMPPGGTE*ASADCP Trigger: TGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGG...TGGCATATCACAGCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGTACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CAA 90 bp | AGACCATGTGGGTCAGGCAGGTCTTGGGGAGTGACTTTGGTCAGCTaGTCAGAGTGTCTACAATATGATTTCGGCCCTCCCCTCCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: RPCGSGRSWGVTLVS*SECLQYDFGPPLPP Trigger: CGGAGGGAGGGGAGGGCCGAAATCATATTGTAGACACTCTGACAAGCTGACCAAAGTCACTCCCCAAGACCTGCCTGACCCACATGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGACTGTGCCTGGAGGCACAGAGTGAGCCTCTGCAGATTGTCCAGGCTCAGAGTGTCTACAATATaGTTTCGGCCCTCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: REDCAWRHRVSLCRLSRLRVSTI*FRPSPP Trigger: GGGAGGGGAGGGCCGAAATCATATTGTAGACACTCT...GAGCCTGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGGCACAGTCTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTACAGTGTCTGCTAGGGAACGGAGACGAGTGTGCAGCTGTGATATGCCAGCAGGTCTTGGGGAGTaGCTTTGGTCAGCTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VGTVSARERRRVCSCDMPAGLGE*LWSACQ Trigger: CTGACAAGCTGACCAAAGTCACTCCCCAAGACCTGC...TGGCATATCACAGCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGTACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGTCTGCTAGGGAACGGAGACGAGTGTGCAGCTGTGATATGCCAGTGGTCTACCCCAAGGAAGGCTaGGGTCAAAGGCACAAAGCG | + |
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Preference number: 2 (lower is better) Translates to: TVSARERRRVCSCDMPVVYPKEG*GQRHKA Trigger: CGCTTTGTGCCTTTGACCGCAGCCTTCCTTGGGGTA...GACCACTGGCATATCACAGCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTGTCCTTGGGCTGCAACACAAGCTGTAGCATTGGGCCAATGCAGAGAGGGGACAACTAGCAGGTaGGTCCCTCACTTTCACTCC | + |
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Preference number: 2 (lower is better) Translates to: LSCPWAATQAVALGQCREGTTSR*VPHFHS Trigger: GGAGTGAAAGTGAGGGACCCACCTGCTAGTTGTCCC...CTCTCTGCATTGGCCCAATGCTACAGCTTGTGTTGCAGCCCAAGGACAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTGTCCTTGGGCTGCAACACAAGCTGTAGCATTGGGCCAATGCAGAGAGTACAGATGTGATCACTaGGGCCTCAGCACAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LSCPWAATQAVALGQCREYRCDH*GLSTGT Trigger: TGTCCCTGTGCTGAGGCCTCAGTGATCACATCTGTA...CTCTCTGCATTGGCCCAATGCTACAGCTTGTGTTGCAGCCCAAGGACAGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGACTGTGCCTGGAGGCACAGAGTGAGCCTCTGCAGATTGTCCAGGCTCACACCAGATCTATACTaGAAGGGAGACTGGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: REDCAWRHRVSLCRLSRLTPDLY*KGDWRT Trigger: GGTCCTCCAGTCTCCCTTGCAGTATAGATCTGGTGT...GAGCCTGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGGCACAGTCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGCACAGGGACAATTCCAAGGTCTTAGAGTGAGTTCAAGGGGAAGGGTCCTGGGGTCAGGCAGGTCTTaGGGAGTGACTTTGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SAQGQFQGLRVSSRGRVLGSGRS*GVTLVS Trigger: GCTGACCAAAGTCACTCCCCAAGACCTGCCTGACCC...CAGGACCCTTCCCCTTGAACTCACTCTAAGACCTTGGAATTGTCCCTGTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTGTCCTTGGGCTGCAACACAAGCTGTAGCATTGGGCCAATGCAGAGAGGGCACAAAGCGACATTaGCAGAATCCCAGGCACCTA | + |
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Preference number: 2 (lower is better) Translates to: LSCPWAATQAVALGQCREGTKRH*QNPRHL Trigger: TAGGTGCCTGGGATTCTGCCAATGTCGCTTTGTGCC...CTCTCTGCATTGGCCCAATGCTACAGCTTGTGTTGCAGCCCAAGGACAGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CAA 90 bp | GACAAGGCTAGACCATGTGGGTCAGGCAGGTCTTGGGGAGTGACTTaGGTCAGCTTGTCAGAGTGTCTACAATATGATTTCGGCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: DKARPCGSGRSWGVT*VSLSECLQYDFGPP Trigger: GGGAGGGCCGAAATCATATTGTAGACACTCTGACAAGCTGACCAAAGTCACTCCCCAAGACCTGCCTGACCCACATGGTCTAGCCTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGCTCTCGGTTCACAATGTGGTTAAGGGCACAGTGGTAGAGCCACTCTGGACTTTCACTCCTCCATaGTGTCAAAGGAGTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: MWLSVHNVVKGTVVEPLWTFTPP*CQRSGV Trigger: CACCCCACTCCTTTGACATCATGGAGGAGTGAAAGT...CCAGAGTGGCTCTACCACTGTGCCCTTAACCACATTGTGAACCGAGAGCCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGCTCTCGGTTCACAATGTGGTTAAGGGCACAGTGGTAGAGCCACTCTGGACTCTGAGCTGTCCTTaGGCTGCAACACAAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: MWLSVHNVVKGTVVEPLWTLSCP*AATQAV Trigger: TACAGCTTGTGTTGCAGCCCAAGGACAGCTCAGAGT...CCAGAGTGGCTCTACCACTGTGCCCTTAACCACATTGTGAACCGAGAGCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGGGCATCTGTCCAGGGTCTGTTGCATAGCTAGCTGCTTCTCTCCTCAGCAGAAAGAAAGACAGTaGTATTACTGCCCCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: QHGHLSRVCCIASCFSPQQKERQ*YYCPRQ Trigger: TTGTCTGGGGCAGTAATATCACTGTCTTTCTTTCTG...CTGAGGAGAGAAGCAGCTAGCTATGCAACAGACCCTGGACAGATGCCCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAGGCTGCGGTCAAAGGCACAAAGCGACATTGGCAGAATCCCAGGCACCATGATGTCAAAGGAGTaGGGTGCTGAGTTGATAAAT | + |
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Preference number: 2 (lower is better) Translates to: QGRLRSKAQSDIGRIPGTMMSKE*GAELIN Trigger: ATTTATCAACTCAGCACCCCACTCCTTTGACATCAT...GGTGCCTGGGATTCTGCCAATGTCGCTTTGTGCCTTTGACCGCAGCCTTCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 72 bp | ACACAGAGCAGACAGATACAAGGTCCTGGTTCACAATaGCCAGAACCAGGTGGGATGGGCCTGCCCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: TQSRQIQGPGSQ*PEPGGMGLPCP Trigger: GGGGCAGGGCAGGCCCATCCCACCTGGTTCTGGCCATTGTGAACCAGGACCTTGTATCTGTCTGCTCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR GCA 72 bp | AGAGAAGACTGTGCCTGGAGGCACAGAGTGAGCCTCTaGAGATTGTCCAGGCTCCGGTCACACTCATCCAGC | + |
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Preference number: 3 (lower is better) Translates to: REDCAWRHRVSL*RLSRLRSHSSS Trigger: GCTGGATGAGTGTGACCGGAGCCTGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGGCACAGTCTTCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR GCA 72 bp | GTGGGTACAGTGTCTGCTAGGGAACGGAGACGAGTGTaGAGCTGTGATATGCCAGTGGTCAGTGGCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: VGTVSARERRRV*SCDMPVVSGLL Trigger: CAGGAGGCCACTGACCACTGGCATATCACAGCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGTACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR TCA 72 bp | CAATGCAGAGAGAAGACTGTGCCTGGAGGCACAGAGTaGGCCTCTGCAGATTGTCCAGGCTCCGGTCACACT | + |
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Preference number: 3 (lower is better) Translates to: QCREKTVPGGTE*ASADCPGSGHT Trigger: AGTGTGACCGGAGCCTGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGGCACAGTCTTCTCTCTGCATTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR GCA 72 bp | GACCTCCTCTCCCTCAAAGTGCCTTTGGAGATAAGGTaGCTACCCCAAGGAAGGCTGCGGTCAAAGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: DLLSLKVPLEIR*LPQGRLRSKAQ Trigger: TTGTGCCTTTGACCGCAGCCTTCCTTGGGGTAGGCACCTTATCTCCAAAGGCACTTTGAGGGAGAGGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 72 bp | TGTAGCATTGGGCCAATGCAGAGAGAAGACTGTGCCTaGAGGCACAGAGTGAGCCTCTGCAGATTGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: CSIGPMQREDCA*RHRVSLCRLSR Trigger: CCTGGACAATCTGCAGAGGCTCACTCTGTGCCTCCAGGCACAGTCTTCTCTCTGCATTGGCCCAATGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTGTAGCATTGGGCCAATGCAGAGAGAAGACTGTGCCTGGAGGCACAGAGGAGTGGGGTGCTGAGTaGATAAATCTTGGTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: QAVALGQCREKTVPGGTEEWGAE*INLGPQ Trigger: CTGGGGACCAAGATTTATCAACTCAGCACCCCACTC...CTCTGTGCCTCCAGGCACAGTCTTCTCTCTGCATTGGCCCAATGCTACAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CAA 90 bp | ATGTGGCTCTCGGTTCACAATGTGGTTAAGGGCACAGTGGTAGAGCCACTCTGGTCCCTCAAAGTGCCTTaGGAGATAAGGTGCCTACCC | + |
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Preference number: 3 (lower is better) Translates to: MWLSVHNVVKGTVVEPLWSLKVP*EIRCLP Trigger: GGGTAGGCACCTTATCTCCAAAGGCACTTTGAGGGA...CCAGAGTGGCTCTACCACTGTGCCCTTAACCACATTGTGAACCGAGAGCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCTGTCCTTGGGCTGCAACACAAGCTGTAGCATTGGGCCAATGCAGAGAGAAAGCTGTCCCTTCCTaGCCACTTTACAGATGTGAT | + |
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Preference number: 3 (lower is better) Translates to: LSCPWAATQAVALGQCREKAVPS*PLYRCD Trigger: ATCACATCTGTAAAGTGGCAAGGAAGGGACAGCTTT...CTCTCTGCATTGGCCCAATGCTACAGCTTGTGTTGCAGCCCAAGGACAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCATGGGCATCTGTCCAGGGTCTGTTGCATAGCTAGCTGCTTCTCTCCTCAGGTGACTTTGGTCAGCTaGTCAGAGTGTCTACAATAT | + |
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Preference number: 3 (lower is better) Translates to: QHGHLSRVCCIASCFSPQVTLVS*SECLQY Trigger: ATATTGTAGACACTCTGACAAGCTGACCAAAGTCAC...CTGAGGAGAGAAGCAGCTAGCTATGCAACAGACCCTGGACAGATGCCCATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR TCA 72 bp | AGTGGCCTCCTGACTCTTCTGCTGCTTCTAAGCACCTaGAGAATGTGGCTCTCGGTTCACAATGTGGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: SGLLTLLLLLST*RMWLSVHNVVK Trigger: CTTAACCACATTGTGAACCGAGAGCCACATTCTTCAGGTGCTTAGAAGCAGCAGAAGAGTCAGGAGGCCACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR GCA 72 bp | TCCACACTTACAGAATCCCCAAAGCTGTCCCTTCCTTaGCACTTTACAGATGTGATCACTGAGGCCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: STLTESPKLSLP*HFTDVITEASA Trigger: TGCTGAGGCCTCAGTGATCACATCTGTAAAGTGGCAAGGAAGGGACAGCTTTGGGGATTCTGTAAGTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 72 bp | AACACACACACACCAGATCTATACTGCAAGGGAGACTaGAGGACCGAAATAAACATCCAGTCGGGGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: NTHTPDLYCKGD*RTEINIQSGPC Trigger: ACATGGCCCCGACTGGATGTTTATTTCGGTCCTCCAGTCTCCCTTGCAGTATAGATCTGGTGTGTGTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 72 bp | ACAGTGGTAGAGCCACTCTGGATTGATGGGATCCAATaGAATGACCTAGAGCTAAATGCAACCCCTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: TVVEPLWIDGIQ*NDLELNATPEL Trigger: CAGCTCAGGGGTTGCATTTAGCTCTAGGTCATTCCATTGGATCCCATCAATCCAGAGTGGCTCTACCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 72 bp | AAAGAAACATACACAGAGCAGACAGATACAAGGTCCTaGTTCACAATGGCCAGAACCAGGTGGGATGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: KETYTEQTDTRS*FTMARTRWDGP Trigger: AGGCCCATCCCACCTGGTTCTGGCCATTGTGAACCAGGACCTTGTATCTGTCTGCTCTGTGTATGTTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CCA 72 bp | CACAATGTGGTTAAGGGCACAGTGGTAGAGCCACTCTaGATTGATGGGATCCAATGGAATGACCTAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: HNVVKGTVVEPL*IDGIQWNDLEL Trigger: TAGCTCTAGGTCATTCCATTGGATCCCATCAATCCAGAGTGGCTCTACCACTGTGCCCTTAACCACATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR TCA 72 bp | ACACGGGCAGACCCACTAGAGCTAGGTAAGATAGTGTaGGCTCTTCTTCTACCACAAAATGACCTTCGTTCT | + |
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Preference number: 3 (lower is better) Translates to: TRADPLELGKIV*ALLLPQNDLRS Trigger: AGAACGAAGGTCATTTTGTGGTAGAAGAAGAGCTCACACTATCTTACCTAGCTCTAGTGGGTCTGCCCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGTCTGCTAGGGAACGGAGACGAGTGTGCAGCTGTGATATGCCAGTGGTCGGCGCCTCCGGTCAGTaGTGGCCAGAACGCACAGTA | + |
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Preference number: 4 (lower is better) Translates to: TVSARERRRVCSCDMPVVGASGQ*WPERTV Trigger: TACTGTGCGTTCTGGCCACCACTGACCGGAGGCGCC...GACCACTGGCATATCACAGCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTTAGGGGACCTCCTCTCCCTCAAAGTGCCTTTGGAGATAAGGTGCCTCGGAGGATGCTGATCTaGCAGCTGAGCAGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GKVRGPPLPQSAFGDKVPRRMLI*QLSRSP Trigger: GGGGCTCCTGCTCAGCTGTCAGATCAGCATCCTCCG...AGGCACCTTATCTCCAAAGGCACTTTGAGGGAGAGGAGGTCCCCTAACTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTTAGGGGACCTCCTCTCCCTCAAAGTGCCTTTGGAGATAAGGTGCCTCCTTCATGCGGTCTGTaGAGTCGCTGCTGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GKVRGPPLPQSAFGDKVPPSCGL*SRCCVG Trigger: CCCCACGCAGCAGCGACTTCACAGACCGCATGAAGG...AGGCACCTTATCTCCAAAGGCACTTTGAGGGAGAGGAGGTCCCCTAACTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CAA 72 bp | CCCAAGGAAGGCTGCGGTCAAAGGCACAAAGCGACATaGGCAGAATCCCAGGCACCTAAGGTGGGGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: PKEGCGQRHKAT*AESQAPKVGDL Trigger: CAAGTCCCCCACCTTAGGTGCCTGGGATTCTGCCAATGTCGCTTTGTGCCTTTGACCGCAGCCTTCCTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | TACAGGCCGGGTACACAAAGCAGTGCTGTCAAGACTGTCCCTTCTAGAACCTGTCGACTAGGGAGGAGGTaGTGCCCGAGAGAATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: YRPGTQSSAVKTVPSRTCRLGRR*CPREWP Trigger: CGGCCATTCTCTCGGGCATCACCTCCTCCCTAGTCG...ACAGGTTCTAGAAGGGACAGTCTTGACAGCACTGCTTTGTGTACCCGGCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | CTCCTCTCCCTCAAAGTGCCTTTGGAGATAAGGTGCCTACCCCAAGGAAGGCTGATGACCGGGCAGGGTTaGTACCGCAGCCAGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LLSLKVPLEIRCLPQGRLMTGQG*YRSQCS Trigger: ACTACACTGGCTGCGGTATCAACCCTGCCCGGTCAT...CAGCCTTCCTTGGGGTAGGCACCTTATCTCCAAAGGCACTTTGAGGGAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CAA 72 bp | GGAAAGTTAGGGGACCTCCTCTCCCTCAAAGTGCCTTaGGAGATAAGGTGCCTACCCCAAGGAAGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GKLGDLLSLKVP*EIRCLPQGRLR Trigger: CCGCAGCCTTCCTTGGGGTAGGCACCTTATCTCCAAAGGCACTTTGAGGGAGAGGAGGTCCCCTAACTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | TCCAAACCCTTGTGTGCCCAGCATGGGCATCTGTCCAGGGTCTGTTGCATAGCTAGACGAAGAGGGTCATaGCCAGGAACTCAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SKPLCAQHGHLSRVCCIARRRGS*PGTQPP Trigger: TGGTGGCTGAGTTCCTGGCCATGACCCTCTTCGTCT...AGCTATGCAACAGACCCTGGACAGATGCCCATGCTGGGCACACAAGGGTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | TCCAAACCCTTGTGTGCCCAGCATGGGCATCTGTCCAGGGTCTGTTGCATAGCTGAAGTCGCTGCTGCGTaGGGCCAGGATGAAGTCATA | + |
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Preference number: 4 (lower is better) Translates to: SKPLCAQHGHLSRVCCIAEVAAA*GQDEVI Trigger: TATGACTTCATCCTGGCCCCACGCAGCAGCGACTTC...AGCTATGCAACAGACCCTGGACAGATGCCCATGCTGGGCACACAAGGGTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | CAGCATGGGCATCTGTCCAGGGTCTGTTGCATAGCTAGCTGCTTCTCTCCTCAGTTGAGAAGTTGCGGGTaGGCACAGCAGAGCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: QHGHLSRVCCIASCFSPQLRSCG*AQQSQM Trigger: CATTTGGCTCTGCTGTGCTCACCCGCAACTTCTCAA...CTGAGGAGAGAAGCAGCTAGCTATGCAACAGACCCTGGACAGATGCCCATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | CTGAGCTGTCCTTGGGCTGCAACACAAGCTGTAGCATTGGGCCAATGCAGAGAGACCTTCACGTTGTCCTaGACCAGCGTCTGGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSCPWAATQAVALGQCRETFTLS*TSVWFL Trigger: GAGAAACCAGACGCTGGTCCAGGACAACGTGAAGGT...CTCTCTGCATTGGCCCAATGCTACAGCTTGTGTTGCAGCCCAAGGACAGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGGCTGCGGTCAAAGGCACAAAGCGACATTGGCAGAATCCCAGGCACCATGGCTCCCACACACTaGGCGATGATGTACATGACA | + |
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Preference number: 4 (lower is better) Translates to: QGRLRSKAQSDIGRIPGTMAPTH*AMMYMT Trigger: TGTCATGTACATCATCGCCCAGTGTGTGGGAGCCAT...GGTGCCTGGGATTCTGCCAATGTCGCTTTGTGCCTTTGACCGCAGCCTTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | TCAGCACAGGGACAATTCCAAGGTCTTAGAGTGAGTTCAAGGGGAAGGGTCCTGTCTCCACCCTGGAGTTaGTGTCGTCAGCATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SAQGQFQGLRVSSRGRVLSPPWS*CRQHPG Trigger: ACCTGGATGCTGACGACATCAACTCCAGGGTGGAGA...CAGGACCCTTCCCCTTGAACTCACTCTAAGACCTTGGAATTGTCCCTGTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | GAGTTGATAAATCTTGGTCCCCAGGAAGCTCTGAGACCAGGAAACAGAAAGAAATGGCCGTGGCGACGATaGCTCCCACACACTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ELINLGPQEALRPGNRKKWPWRR*LPHTGR Trigger: TCGCCCAGTGTGTGGGAGCCATCGTCGCCACGGCCA...TTTCTTTCTGTTTCCTGGTCTCAGAGCTTCCTGGGGACCAAGATTTATCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | TACAGGCCGGGTACACAAAGCAGTGCTGTCAAGACTGTCCCTTCTAGAACCTGTTCATACTCCTCCACCTaGCCACTGGTCCACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: YRPGTQSSAVKTVPSRTCSYSST*PLVHTF Trigger: GAAGGTGTGGACCAGTGGCCAGGTGGAGGAGTATGA...ACAGGTTCTAGAAGGGACAGTCTTGACAGCACTGCTTTGTGTACCCGGCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | GAGTTGATAAATCTTGGTCCCCAGGAAGCTCTGAGACCAGGAAACAGAAAGAAACCAGGGCACCCCCAATaGACGGCCCCACCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ELINLGPQEALRPGNRKKPGHPQ*TAPPRK Trigger: TTTTCTGGGTGGGGCCGTTCATTGGGGGTGCCCTGG...TTTCTTTCTGTTTCCTGGTCTCAGAGCTTCCTGGGGACCAAGATTTATCAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | GAGTTGATAAATCTTGGTCCCCAGGAAGCTCTGAGACCAGGAAACAGAAAGAAACCGAGAGAATGGCCGTaGCGACGATGGCTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ELINLGPQEALRPGNRKKPREWP*RRWLPH Trigger: GTGTGGGAGCCATCGTCGCCACGGCCATTCTCTCGG...TTTCTTTCTGTTTCCTGGTCTCAGAGCTTCCTGGGGACCAAGATTTATCAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CCA 90 bp | CTGAGCTGTCCTTGGGCTGCAACACAAGCTGTAGCATTGGGCCAATGCAGAGAGACCCAGAAAATCCAGTaGTTTGAGAAGTTGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSCPWAATQAVALGQCRETQKIQ*FEKLRV Trigger: CACCCGCAACTTCTCAAACCACTGGATTTTCTGGGT...CTCTCTGCATTGGCCCAATGCTACAGCTTGTGTTGCAGCCCAAGGACAGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR TCA 90 bp | CTTCCTTGCCACTTTACAGATGTGATCACTGAGGCCTCAGCACAGGGACAATTCTCTCCAGTGGGTAATTaGAGCCTAGGGCAGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: LPCHFTDVITEASAQGQFSPVGN*SLGQNQ Trigger: TTGGTTCTGCCCTAGGCTTCAATTACCCACTGGAGA...GAATTGTCCCTGTGCTGAGGCCTCAGTGATCACATCTGTAAAGTGGCAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| 3UTR CAA 72 bp | AGACCATGTGGGTCAGGCAGGTCTTGGGGAGTGACTTaGGTCAGCTTGTCAGAGTGTCTACAATATGATTTC | + |
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Preference number: 4 (lower is better) Translates to: RPCGSGRSWGVT*VSLSECLQYDF Trigger: GAAATCATATTGTAGACACTCTGACAAGCTGACCAAAGTCACTCCCCAAGACCTGCCTGACCCACATGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS GCA 90 bp | TCTCGGCGCCTCCGGTCAGTGGTGGCCAGAACGCACAGTACCAGCTaGAGAGTGCCAATGATCTCAATGCCCAGGCCCTGGCCAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SRRLRSVVARTHSTS*RVPMISMPRPWPEF Trigger: GAACTCTGGCCAGGGCCTGGGCATTGAGATCATTGGCACTCTGCAGCTGGTACTGTGCGTTCTGGCCACCACTGACCGGAGGCGCCGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CCA 90 bp | GCCACTGGTCCACACCTTCATGCGGTCTGTGAAGTCGCTGCTGCGTaGGGCCAGGATGAAGTCATAGATGAGCACTGCCAGGGCACCCCC | + |
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Preference number: 5 (lower is better) Translates to: ATGPHLHAVCEVAAA*GQDEVIDEHCQGTP Trigger: GGGGGTGCCCTGGCAGTGCTCATCTATGACTTCATCCTGGCCCCACGCAGCAGCGACTTCACAGACCGCATGAAGGTGTGGACCAGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS TCA 90 bp | GAGCCAGGTCATTGCGGCCAAGTGAATTGTCGACTAGGGAGGAGGTaGTGCCCGAGAGAATGGCCGTGGCGACGATGGCTCCCACACACT | + |
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Preference number: 5 (lower is better) Translates to: EPGHCGQVNCRLGRR*CPREWPWRRWLPHT Trigger: AGTGTGTGGGAGCCATCGTCGCCACGGCCATTCTCTCGGGCATCACCTCCTCCCTAGTCGACAATTCACTTGGCCGCAATGACCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS TCA 90 bp | GGTCAGTGGTGGCCAGAACGCACAGTACCAGCTGCAGAGTGCCAATaGTCTCAATGCCCAGGCCCTGGCCAGAGTTCACACCGTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GQWWPERTVPAAECQ*SQCPGPGQSSHREP Trigger: TGGCTCACGGTGTGAACTCTGGCCAGGGCCTGGGCATTGAGATCATTGGCACTCTGCAGCTGGTACTGTGCGTTCTGGCCACCACTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS TCA 90 bp | GTGCCAATGATCTCAATGCCCAGGCCCTGGCCAGAGTTCACACCGTaGGCCAGGTCATTGCGGCCAAGTGAATTGTCGACTAGGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VPMISMPRPWPEFTP*ARSLRPSELSTREE Trigger: CTCCTCCCTAGTCGACAATTCACTTGGCCGCAATGACCTGGCTCACGGTGTGAACTCTGGCCAGGGCCTGGGCATTGAGATCATTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CCA 90 bp | ACCCTGGAGTTGATGTCGTCAGCATCCAGGTCATACTCCTCCACCTaGCCACTGGTCCACACCTTCATGCGGTCTGTGAAGTCGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TLELMSSASRSYSST*PLVHTFMRSVKSLL Trigger: CAGCAGCGACTTCACAGACCGCATGAAGGTGTGGACCAGTGGCCAGGTGGAGGAGTATGACCTGGATGCTGACGACATCAACTCCAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CAA 90 bp | ACAGTGTCTGCTAGGGAACGGAGACGAGTGTGCAGCTGTGATATGCCAGTGGTCATCTCCACCCTGGAGTaGATGTCGTCAGCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TVSARERRRVCSCDMPVVISTLE*MSSASR Trigger: CCTGGATGCTGACGACATCAACTCCAGGGTGGAGAT...GACCACTGGCATATCACAGCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTTGCCACTTTACAGATGTGATCACTGAGGCCTCAGCACAGGGACAATTCAGCGACACCTTCACGTaGTCCTGGACCAGCGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPCHFTDVITEASAQGQFSDTFT*SWTSVW Trigger: CCAGACGCTGGTCCAGGACAACGTGAAGGTGTCGCT...GAATTGTCCCTGTGCTGAGGCCTCAGTGATCACATCTGTAAAGTGGCAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CCA 72 bp | GGGCTGAGCCACCTAAGTCTCGGCGCCTCCGGTCAGTaGTGGCCAGAACGCACAGTACCAGCTGCAGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GLSHLSLGASGQ*WPERTVPAAEC Trigger: GCACTCTGCAGCTGGTACTGTGCGTTCTGGCCACCACTGACCGGAGGCGCCGAGACTTAGGTGGCTCAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CCA 72 bp | CTGAGCCACCTAAGTCTCGGCGCCTCCGGTCAGTGGTaGCCAGAACGCACAGTACCAGCTGCAGAGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LSHLSLGASGQW*PERTVPAAECQ Trigger: TTGGCACTCTGCAGCTGGTACTGTGCGTTCTGGCCACCACTGACCGGAGGCGCCGAGACTTAGGTGGCTCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS TCA 72 bp | GCGATGATGTACATGACAGCCCGGAGGATGCTGATCTaGCAGCTGAGCAGGAGCCCCAGTGTGACCGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AMMYMTARRMLI*QLSRSPSVTAG Trigger: CCCTGCGGTCACACTGGGGCTCCTGCTCAGCTGTCAGATCAGCATCCTCCGGGCTGTCATGTACATCATCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS GCA 72 bp | CTCCGGTCAGTGGTGGCCAGAACGCACAGTACCAGCTaGAGAGTGCCAATGATCTCAATGCCCAGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LRSVVARTHSTS*RVPMISMPRPW Trigger: CCAGGGCCTGGGCATTGAGATCATTGGCACTCTGCAGCTGGTACTGTGCGTTCTGGCCACCACTGACCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CAA 90 bp | TGTGACCGCAGGGTTGAGGTGAGCACCGCTGATGTGACCCACACTTaGGGCCAGAGTAGCGATGCTCAAACCAAAGGCCAGCGACACCTT | + |
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Preference number: 6 (lower is better) Translates to: CDRRVEVSTADVTHT*GQSSDAQTKGQRHL Trigger: AAGGTGTCGCTGGCCTTTGGTTTGAGCATCGCTACTCTGGCCCAAAGTGTGGGTCACATCAGCGGTGCTCACCTCAACCCTGCGGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CCA 72 bp | CCACACCTTCATGCGGTCTGTGAAGTCGCTGCTGCGTaGGGCCAGGATGAAGTCATAGATGAGCACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PHLHAVCEVAAA*GQDEVIDEHCQ Trigger: CTGGCAGTGCTCATCTATGACTTCATCCTGGCCCCACGCAGCAGCGACTTCACAGACCGCATGAAGGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CAA 72 bp | GCGATGCTCAAACCAAAGGCCAGCGACACCTTCACGTaGTCCTGGACCAGCGTCTGGTTTCTCTCCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AMLKPKASDTFT*SWTSVWFLSSG Trigger: CCCACTGGAGAGAAACCAGACGCTGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTTGGTTTGAGCATCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CAA 72 bp | AGGGTTGAGGTGAGCACCGCTGATGTGACCCACACTTaGGGCCAGAGTAGCGATGCTCAAACCAAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RVEVSTADVTHT*GQSSDAQTKGQ Trigger: CTGGCCTTTGGTTTGAGCATCGCTACTCTGGCCCAAAGTGTGGGTCACATCAGCGGTGCTCACCTCAACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CAA 72 bp | AACGGCCCCACCCAGAAAATCCAGTGGTTTGAGAAGTaGCGGGTGAGCACAGCAGAGCCAAATGACCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NGPTQKIQWFEK*RVSTAEPNDRA Trigger: TGCCCGGTCATTTGGCTCTGCTGTGCTCACCCGCAACTTCTCAAACCACTGGATTTTCTGGGTGGGGCCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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| CDS CCA 72 bp | TTGATGTCGTCAGCATCCAGGTCATACTCCTCCACCTaGCCACTGGTCCACACCTTCATGCGGTCTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LMSSASRSYSST*PLVHTFMRSVK Trigger: CTTCACAGACCGCATGAAGGTGTGGACCAGTGGCCAGGTGGAGGAGTATGACCTGGATGCTGACGACATCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004774.4 |
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