Pregenerated sensors for APRT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006589Ensembl transcript IDs: ENSMUST00000006764.9, ENSMUST00000212093.2, ENSMUST00000213029.2, ENSMUST00000213062.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACAAAAGGGCGGCCGGTAGCTCACAAAGGTCACTTAGGCGCCTaGGCTGAGCCACCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LTKGRPVAHKGHLGA*AEPPSSSWCCWEQG Trigger: CCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAGTGACCTTTGTGAGCTACCGGCCGCCCTTTTGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR GCA 90 bp | GGTCACTTAGGCGCCTGGGCTGAGCCACCAAGCAGTTCCTGGTGCTaGTGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCAGTCATA | + |
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Preference number: 1 (lower is better) Translates to: GHLGAWAEPPSSSWC*WEQGCDHLASSSVI Trigger: TATGACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213062.2 |
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| 3UTR GCA 90 bp | AAAGGTCACTTAGGCGCCTGGGCTGAGCCACCAAGCAGTTCCTGGTaGTGCTGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: KGHLGAWAEPPSSSW*CWEQGCDHLASSSV Trigger: GACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAGTGACCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213062.2 |
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| 3UTR CCA 90 bp | CACTTAGGCGCCTGGGCTGAGCCACCAAGCAGTTCCTGGTGCTGCTaGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCAGTCATACTG | + |
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Preference number: 1 (lower is better) Translates to: HLGAWAEPPSSSWCC*EQGCDHLASSSVIL Trigger: CAGTATGACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213062.2 |
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| 3UTR GCA 90 bp | GTCCGTCATCTGGAGGTTCCAGGGTCTCCCAGCCTGCTGTCAGGATaGTGGCCAGCTTTGTGCCCTAAAAGAGGGAGGCCTGGTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VRHLEVPGSPSLLSG*WPALCPKRGRPGSG Trigger: TCCAGAACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAACCTCCAGATGACGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR CCA 90 bp | CGTCATCTGGAGGTTCCAGGGTCTCCCAGCCTGCTGTCAGGATGCTaGCCAGCTTTGTGCCCTAAAAGAGGGAGGCCTGGTTCTGGACAC | + |
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Preference number: 1 (lower is better) Translates to: RHLEVPGSPSLLSGC*PALCPKRGRPGSGH Trigger: GTGTCCAGAACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAACCTCCAGATGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR TCA 90 bp | CTGGATTTCCAGCTCAGCCTTCCCATACTCCAGAGAATAGGAGGCTaGCACAGTGGGGCCCGGCAGCTTCCCCTGTTTCCGGATGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LDFQLSLPILQRIGG*HSGARQLPLFPDEH Trigger: GTGCTCATCCGGAAACAGGGGAAGCTGCCGGGCCCCACTGTGTCAGCCTCCTATTCTCTGGAGTATGGGAAGGCTGAGCTGGAAATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR GCA 90 bp | GTTCCAGGGTCTCCCAGCCTGCTGTCAGGATGCTGGCCAGCTTTGTaGCCTAAAAGAGGGAGGCCTGGTTCTGGACACAAGGACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: VPGSPSLLSGCWPAL*PKRGRPGSGHKDRA Trigger: TGCTCTGTCCTTGTGTCCAGAACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR GCA 90 bp | ATGGTTCCTCCTGTGGCCAGGAGGTCATCCACAATGACCACTCTCTaGCCGGGTTCCAAGGCATCTTTCTGGATTTCCAGCTCAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: MVPPVARRSSTMTTL*PGSKASFWISSSAF Trigger: GAAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGGTCATTGTGGATGACCTCCTGGCCACAGGAGGAACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR TCA 90 bp | GGGTACCTAGCAGGGAAGGGAGACTCCTACATAGTTCATCCAGGGTaGACAAGCGTCCAAGGCAGTGAGGAACCAAGGAGGAAGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GYLAGKGDSYIVHPG*TSVQGSEEPRRKCQ Trigger: CTGACACTTCCTCCTTGGTTCCTCACTGCCTTGGACGCTTGTTCACCCTGGATGAACTATGTAGGAGTCTCCCTTCCCTGCTAGGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR GCA 90 bp | GCATATCAAAACGGTTTATTGATCTCCAGTAGCACAGCTCTGCTATaGTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: AYQNGLLISSSTALL*SRVCGTCTKYKDPG Trigger: CCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCATAGCAGAGCTGTGCTACTGGAGATCAATAAACCGTTTTGATATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCACCAGGCTCACACACTCCACCACTTCAGCCCGGAGCTGGTGCAGCAGGAGGAGGCTGACACAGTaGGGCCCGGCAGCTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSTRLTHSTTSARSWCSRRRLTQ*GPAASP Trigger: AGGGGAAGCTGCCGGGCCCCACTGTGTCAGCCTCCT...CCTGCTGCACCAGCTCCGGGCTGAAGTGGTGGAGTGTGTGAGCCTGGTGGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGAGCCACCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTGACCATCGTCCTAGCCTCTCCCTaGCCTTCAGCGAGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLSHQAVPGAAGSRGVTIVLASP*PSARSA Trigger: AGCTGACCTCGCTGAAGGGCAGGGAGAGGCTAGGAC...GATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213062.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCCACAGGCACGGCGGATCACTTAGGCGCCTGGGCTaGGCCACCAAGCAGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CGTCTKYKDPGVHRHGGSLRRLG*ATKQFL Trigger: CAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAG...TGATCCGCCGTGCCTGTGGACCCCTGGATCCTTGTACTTTGTACACGTGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTCTCTGCCCGGGTTCCAAGGCATCTTTCTGGATTTCCAGCTCAGCCTTCCTCCCCTGTTTCCGGATaGGCACACAGCCCACGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PLSARVPRHLSGFPAQPSSPVSG*AHSPRP Trigger: TGGGCGTGGGCTGTGTGCTCATCCGGAAACAGGGGA...GGAAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR CAA 90 bp | GAGGTTCCAGGGTCTCCCAGCCTGCTGTCAGGATGCTGGCCAGCTTaGTGCCCTAAAAGAGGGAGGCCTGGTTCTGGACACAAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: EVPGSPSLLSGCWPA*CPKRGRPGSGHKDR Trigger: TCTGTCCTTGTGTCCAGAACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCAGTCATACTGGAGGAGAGAGTCCTAGCCTCTCCCTaGCCTTCAGCGAGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WEQGCDHLASSSVILEERVLASP*PSARSA Trigger: AGCTGACCTCGCTGAAGGGCAGGGAGAGGCTAGGAC...TCTCTCCTCCAGTATGACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212093.2 ENSMUST00000213062.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCGCAAACATGGTTCCTCCTGTGGCCAGGAGGTCATCCACAATGACCACTCTGTCCTAGCCTCTCCCTaGCCTTCAGCGAGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GRKHGSSCGQEVIHNDHSVLASP*PSARSA Trigger: AGCTGACCTCGCTGAAGGGCAGGGAGAGGCTAGGAC...AGAGTGGTCATTGTGGATGACCTCCTGGCCACAGGAGGAACCATGTTTGCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR GCA 90 bp | GACCACTCTCTGCCCGGGTTCCAAGGCATCTTTCTGGATTTCCAGCTCAGCCTTCAGGGTCTCCCAGCCTaGTGTCAGGATGCTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: DHSLPGFQGIFLDFQLSLQGLPA*CQDAGQ Trigger: CTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTG...AAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCCACACCACCAAGCAGTTCCTaGTGCTGCTGGGAGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: YAPGCVARVQSTRIQGSTPPSSS*CCWEQG Trigger: CCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGG...TGTGGACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTCTCTGCCCGGGTTCCAAGGCATCTTTCTGGATTTCCAGCTCAGCCTTCCAAGCGTCCAAGGCAGTaGGGAACCAAGGAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PLSARVPRHLSGFPAQPSKRPRQ*GTKEEV Trigger: CACTTCCTCCTTGGTTCCTCACTGCCTTGGACGCTT...GGAAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGCCTTCCCATACTCCAGAGAATAGGAGGCTGACACAGTGGGGCCCGGCAATAGTTCATCCAGGGTaGACAAGCGTCCAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AQPSHTPENRRLTQWGPAIVHPG*TSVQGS Trigger: ACTGCCTTGGACGCTTGTTCACCCTGGATGAACTAT...TGCCGGGCCCCACTGTGTCAGCCTCCTATTCTCTGGAGTATGGGAAGGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCAGCCTGCTGTCAGGATGCTGGCCAGCTTTGTGCCCTAAAAGAGGGAGGAAGAATGGATGGGTGTaGGGCAGACTGTGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: SPSLLSGCWPALCPKRGRKNGWV*GRLWVT Trigger: TGTCACCCACAGTCTGCCCCACACCCATCCATTCTT...CCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCGCAAACATGGTTCCTCCTGTGGCCAGGAGGTCATCCACAATGACCACTCTAGGGAGGCCTGGTTCTaGACACAAGGACAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GRKHGSSCGQEVIHNDHSREAWF*TQGQSR Trigger: TCTGCTCTGTCCTTGTGTCCAGAACCAGGCCTCCCT...AGAGTGGTCATTGTGGATGACCTCCTGGCCACAGGAGGAACCATGTTTGCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR CCA 90 bp | CCACTCTCTGCCCGGGTTCCAAGGCATCTTTCTGGATTTCCAGCTCAGCCTTCCAGGATGTCCGTCATCTaGAGGTTCCAGGGTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PLSARVPRHLSGFPAQPSRMSVI*RFQGLP Trigger: TGGGAGACCCTGGAACCTCCAGATGACGGACATCCT...GGAAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCAGCCTGCTGTCAGGATGCTGGCCAGCTTTGTGCCCTAAAAGAGGGAGGAGGTTGAAGAAAGAATaGATGGGTGTGGGGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: SPSLLSGCWPALCPKRGRRLKKE*MGVGQT Trigger: AGTCTGCCCCACACCCATCCATTCTTTCTTCAACCT...CCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCGCAAACATGGTTCCTCCTGTGGCCAGGAGGTCATCCACAATGACCACTCTGGAAGTGTCAGAGGTTaGAGAAAGAATGGATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GRKHGSSCGQEVIHNDHSGSVRG*RKNGWV Trigger: CACCCATCCATTCTTTCTTCAACCTCTGACACTTCC...AGAGTGGTCATTGTGGATGACCTCCTGGCCACAGGAGGAACCATGTTTGCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR CCA 72 bp | GGGCGGCCGGTAGCTCACAAAGGTCACTTAGGCGCCTaGGCTGAGCCACCAAGCAGTTCCTGGTGCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GRPVAHKGHLGA*AEPPSSSWCCW Trigger: CCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAGTGACCTTTGTGAGCTACCGGCCGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR GCA 72 bp | TTAGGCGCCTGGGCTGAGCCACCAAGCAGTTCCTGGTaGTGCTGGGAGCAGGGGTGTGACCATCTAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LGAWAEPPSSSW*CWEQGCDHLAS Trigger: GCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR CCA 72 bp | CACTTAGGCGCCTGGGCTGAGCCACCAAGCAGTTCCTaGTGCTGCTGGGAGCAGGGGTGTGACCATCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: HLGAWAEPPSSS*CCWEQGCDHLA Trigger: GGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCCAGGCGCCTAAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR GCA 72 bp | CTGGAGGTTCCAGGGTCTCCCAGCCTGCTGTCAGGATaGTGGCCAGCTTTGTGCCCTAAAAGAGGGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LEVPGSPSLLSG*WPALCPKRGRP Trigger: AGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAACCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR GCA 72 bp | AGGCTCACACACTCCACCACTTCAGCCCGGAGCTGGTaGAGCAGGTCACAGGCCGCAAACATGGTTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: RLTHSTTSARSW*SRSQAANMVPP Trigger: AGGAGGAACCATGTTTGCGGCCTGTGACCTGCTGCACCAGCTCCGGGCTGAAGTGGTGGAGTGTGTGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR CCA 72 bp | GAGGTTCCAGGGTCTCCCAGCCTGCTGTCAGGATGCTaGCCAGCTTTGTGCCCTAAAAGAGGGAGGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: EVPGSPSLLSGC*PALCPKRGRPG Trigger: ACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR CCA 72 bp | ACCAGGCTCACACACTCCACCACTTCAGCCCGGAGCTaGTGCAGCAGGTCACAGGCCGCAAACATGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: TRLTHSTTSARS*CSRSQAANMVP Trigger: AGGAACCATGTTTGCGGCCTGTGACCTGCTGCACCAGCTCCGGGCTGAAGTGGTGGAGTGTGTGAGCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR TCA 72 bp | ACCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTaGCCATCTAGCCAGCTCCTCAGTCATACTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: TKQFLVLLGAGV*PSSQLLSHTGG Trigger: TCCTCCAGTATGACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213062.2 |
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| 3UTR GCA 72 bp | TCTCCCAGCCTGCTGTCAGGATGCTGGCCAGCTTTGTaGCCTAAAAGAGGGAGGCCTGGTTCTGGACACAAG | + |
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Preference number: 3 (lower is better) Translates to: SPSLLSGCWPAL*PKRGRPGSGHK Trigger: CTTGTGTCCAGAACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR GCA 72 bp | ATGTCCGTCATCTGGAGGTTCCAGGGTCTCCCAGCCTaGTGTCAGGATGCTGGCCAGCTTTGTGCCCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: MSVIWRFQGLPA*CQDAGQLCALK Trigger: TTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCCTGGAACCTCCAGATGACGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR GCA 72 bp | CCTGTGGCCAGGAGGTCATCCACAATGACCACTCTCTaGCCGGGTTCCAAGGCATCTTTCTGGATTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PVARRSSTMTTL*PGSKASFWISS Trigger: GCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGGTCATTGTGGATGACCTCCTGGCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR TCA 72 bp | GCAGGGAAGGGAGACTCCTACATAGTTCATCCAGGGTaGACAAGCGTCCAAGGCAGTGAGGAACCAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: AGKGDSYIVHPG*TSVQGSEEPRR Trigger: CCTCCTTGGTTCCTCACTGCCTTGGACGCTTGTTCACCCTGGATGAACTATGTAGGAGTCTCCCTTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR TCA 72 bp | ACATGGTTCCTCCTGTGGCCAGGAGGTCATCCACAATaGCCACTCTCTGCCCGGGTTCCAAGGCATCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: TWFLLWPGGHPQ*PLSARVPRHLS Trigger: AGAAAGATGCCTTGGAACCCGGGCAGAGAGTGGTCATTGTGGATGACCTCCTGGCCACAGGAGGAACCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR CCA 72 bp | ATGACCACTCTCTGCCCGGGTTCCAAGGCATCTTTCTaGATTTCCAGCTCAGCCTTCCCATACTCCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: MTTLCPGSKASF*ISSSAFPYSRE Trigger: TTCTCTGGAGTATGGGAAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAACCCGGGCAGAGAGTGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| 3UTR TCA 72 bp | CATAGTTCATCCAGGGTGAACAAGCGTCCAAGGCAGTaGGGAACCAAGGAGGAAGTGTCAGAGGTTGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: HSSSRVNKRPRQ*GTKEEVSEVEE Trigger: TTCTTCAACCTCTGACACTTCCTCCTTGGTTCCTCACTGCCTTGGACGCTTGTTCACCCTGGATGAACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR GCA 90 bp | GGGCTGAGCCACCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTGACCATCGGAAGTCGGGGAAGCTaGGGATGCGCCGCGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GLSHQAVPGAAGSRGVTIGSRGS*GCAAPP Trigger: TGGTGGCGCGGCGCATCCGCAGCTTCCCCGACTTCC...GATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR TCA 90 bp | GGGCTGAGCCACCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTGACCATCCAGAGAATAGGAGGCTaGCACAGTGGGGCCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GLSHQAVPGAAGSRGVTIQRIGG*HSGARQ Trigger: CTGCCGGGCCCCACTGTGTCAGCCTCCTATTCTCTG...GATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGGCTCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR GCA 90 bp | CCACCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTGACCATCTAGCCAGCTCAGCCCGGAGCTGGTaGAGCAGGTCACAGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PPSSSWCCWEQGCDHLASSARSW*SRSQAA Trigger: TGCGGCCTGTGACCTGCTGCACCAGCTCCGGGCTGA...GCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCCCCTGTTTCCGGATaGGCACACAGCCCACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSSWCCWEQGCDHLASSSPVSG*AHSPRP Trigger: TGGGCGTGGGCTGTGTGCTCATCCGGAAACAGGGGA...GGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR GCA 90 bp | GCTACCCCTAAGCAAGGATGTCCGTCATCTGGAGGTTCCAGGGTCTCCCAGCCTGGAAGTCGGGGAAGCTaGGGATGCGCCGCGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ATPKQGCPSSGGSRVSQPGSRGS*GCAAPP Trigger: TGGTGGCGCGGCGCATCCGCAGCTTCCCCGACTTCC...AGGCTGGGAGACCCTGGAACCTCCAGATGACGGACATCCTTGCTTAGGGGTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR GCA 90 bp | TGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCAGTCATACTGGAGGAGAGATCAGCCCGGAGCTGGTaGAGCAGGTCACAGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: WEQGCDHLASSSVILEERSARSW*SRSQAA Trigger: TGCGGCCTGTGACCTGCTGCACCAGCTCCGGGCTGA...TCTCTCCTCCAGTATGACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212093.2 ENSMUST00000213062.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCACCAGGCTCACACACTCCACCACTTCAGCCCGGAGCTGGTGCAGCAGGTGGACTTCAGGTGACTaGCCAAGAGGCGGATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSTRLTHSTTSARSWCSRWTSGD*PRGGWK Trigger: CTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCA...CCTGCTGCACCAGCTCCGGGCTGAAGTGGTGGAGTGTGTGAGCCTGGTGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCTCAGTCATACTGGAGGAGACTTCAGCCCGGAGCTaGTGCAGCAGGTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CWEQGCDHLASSSVILEETSARS*CSRSQA Trigger: GGCCTGTGACCTGCTGCACCAGCTCCGGGCTGAAGT...CTCCTCCAGTATGACTGAGGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212093.2 ENSMUST00000213062.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCCACAGGCACGACTTCAGCCCGGAGCTaGTGCAGCAGGTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGCVARVQSTRIQGSTGTTSARS*CSRSQA Trigger: GGCCTGTGACCTGCTGCACCAGCTCCGGGCTGAAGT...CGTGCCTGTGGACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| 3UTR CAA 72 bp | GGGTCTCCCAGCCTGCTGTCAGGATGCTGGCCAGCTTaGTGCCCTAAAAGAGGGAGGCCTGGTTCTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GSPSLLSGCWPA*CPKRGRPGSGH Trigger: GTGTCCAGAACCAGGCCTCCCTCTTTTAGGGCACAAAGCTGGCCAGCATCCTGACAGCAGGCTGGGAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR TCA 90 bp | GCTACCCCTAAGCAAGGATGTCCGTCATCTGGAGGTTCCAGGGTCTCCCAGCCTTGCGTGGACTTCAGGTaGCTGGCCAAGAGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: ATPKQGCPSSGGSRVSQPCVDFR*LAKRRM Trigger: CATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCA...AGGCTGGGAGACCCTGGAACCTCCAGATGACGGACATCCTTGCTTAGGGGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR CCA 90 bp | CTGCTATGCTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCAGGAGGCTGACACAGTaGGGCCCGGCAGCTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLCSRVCGTCTKYKDPGVRRLTQ*GPAASP Trigger: AGGGGAAGCTGCCGGGCCCCACTGTGTCAGCCTCCT...GACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCATAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCCACAGGACTTCAGCCCGGAGCTaGTGCAGCAGGTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSRVCGTCTKYKDPGVHRTSARS*CSRSQA Trigger: GGCCTGTGACCTGCTGCACCAGCTCCGGGCTGAAGT...CCTGTGGACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213062.2 |
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| CDS-3UTR CCA 90 bp | TATGCTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCCACACAGCACGCCCGGGATTaGGAAGTCGGGGAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: YAPGCVARVQSTRIQGSTQHARD*EVGEAA Trigger: CGCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTG...TGTGGACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR GCA 90 bp | TGCCCTAAAAGAGGGAGGCCTGGTTCTGGACACAAGGACAGAGCAGAGTTCGTCGCAAGGCCACTCGCCTaGGATGTAGTCGATCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: CPKRGRPGSGHKDRAEFVARPLA*DVVDLA Trigger: GGCAAGATCGACTACATCGCAGGCGAGTGGCCTTGC...GACGAACTCTGCTCTGTCCTTGTGTCCAGAACCAGGCCTCCCTCTTTTAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR CCA 90 bp | TTCCAAGGCATCTTTCTGGATTTCCAGCTCAGCCTTCCCATACTCCAGAGAATACAGCACGCCCGGGATTaGGAAGTCGGGGAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: FQGIFLDFQLSLPILQRIQHARD*EVGEAA Trigger: CGCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTG...TATTCTCTGGAGTATGGGAAGGCTGAGCTGGAAATCCAGAAAGATGCCTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTATGCTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTTGGACTTCAGGTGACTaGCCAAGAGGCGGATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SAMLQGVWHVYKVQGSRGWTSGD*PRGGWK Trigger: CTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCA...ACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCATAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR CCA 90 bp | ATGCTCCAGGGTGTGTGGCACGTGTACAAAGTACAAGGATCCAGGGGTCCACAGCAAACAGGAAGCCCCTaGAGTCTAGACCTGCGATGT | + |
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Preference number: 4 (lower is better) Translates to: MLQGVWHVYKVQGSRGPQQTGSP*SLDLRC Trigger: ACATCGCAGGTCTAGACTCCAGGGGCTTCCTGTTTG...CTGTGGACCCCTGGATCCTTGTACTTTGTACACGTGCCACACACCCTGGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR TCA 90 bp | TATCAAAACGGTTTATTGATCTCCAGTAGCACAGCTCTGCTATGCTCCAGGGTGTGCGTGGACTTCAGGTaGCTGGCCAAGAGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: YQNGLLISSSTALLCSRVCVDFR*LAKRRM Trigger: CATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCA...CACCCTGGAGCATAGCAGAGCTGTGCTACTGGAGATCAATAAACCGTTTTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR CAA 90 bp | CCAAGCAGTTCCTGGTGCTGCTGGGAGCAGGGGTGTGACCATCTAGCCAGCTCCACAGCACGCCCGGGATaGGGAAGTCGGGGAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PSSSWCCWEQGCDHLASSTARPG*GSRGSC Trigger: GCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTGT...GGAGCTGGCTAGATGGTCACACCCCTGCTCCCAGCAGCACCAGGAACTGCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS-3UTR CAA 90 bp | GCTCAGCCTTCCCATACTCCAGAGAATAGGAGGCTGACACAGTGGGGCCCGGCAACAGCACGCCCGGGATaGGGAAGTCGGGGAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AQPSHTPENRRLTQWGPATARPG*GSRGSC Trigger: GCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTGT...TGCCGGGCCCCACTGTGTCAGCCTCCTATTCTCTGGAGTATGGGAAGGCTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS TCA 90 bp | AAGCTCGGAAGGAGTCCGGGTCTTTCAAGAGGGGCGAGATATCCCTaGACAGCACGCCCGGGATTGGGAAGTCGGGGAAGCTGCGGATGC | + |
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Preference number: 5 (lower is better) Translates to: KLGRSPGLSRGARYP*TARPGLGSRGSCGC Trigger: GCATCCGCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTGTTCAGGGATATCTCGCCCCTCTTGAAAGACCCGGACTCCTTCCGAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS CCA 90 bp | GTCTTTCAAGAGGGGCGAGATATCCCTGAACAGCACGCCCGGGATTaGGAAGTCGGGGAAGCTGCGGATGCGCCGCGCCACCAGTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: VFQEGRDIPEQHARD*EVGEAADAPRHQFQ Trigger: TTGAAACTGGTGGCGCGGCGCATCCGCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTGTTCAGGGATATCTCGCCCCTCTTGAAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS CCA 90 bp | AGCAAGGCCACTCGCCTGCGATGTAGTCGATCTTGCCGCTGTGCGTaGACTTCAGGTGACTGGCCAAGAGGCGGATGGAAGCTCGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SKATRLRCSRSCRCA*TSGDWPRGGWKLGR Trigger: CCTTCCGAGCTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAGGCGAGTGGCCTTGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS CCA 90 bp | CCCTGGAGTCTAGACCTGCGATGTAGTCGATCTTGCCGCTGTGCGTaGACTTCAGGTGACTGGCCAAGAGGCGGATGGAAGCTCGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PWSLDLRCSRSCRCA*TSGDWPRGGWKLGR Trigger: CCTTCCGAGCTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAGGTCTAGACTCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS GCA 90 bp | CAAACAGGAAGCCCCTGGAGTCTAGACCTGCGATGTAGTCGATCTTaGCGCTGTGCGTGGACTTCAGGTGACTGGCCAAGAGGCGGATGG | + |
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Preference number: 5 (lower is better) Translates to: QTGSPWSLDLRCSRS*RCAWTSGDWPRGGW Trigger: CCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAGGTCTAGACTCCAGGGGCTTCCTGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS CCA 90 bp | CTGCGATGTAGTCGATCTTGCCGCTGTGCGTGGACTTCAGGTGACTaGCCAAGAGGCGGATGGAAGCTCGGAAGGAGTCCGGGTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LRCSRSCRCAWTSGD*PRGGWKLGRSPGLS Trigger: TGAAAGACCCGGACTCCTTCCGAGCTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS CCA 72 bp | GAGGGGCGAGATATCCCTGAACAGCACGCCCGGGATTaGGAAGTCGGGGAAGCTGCGGATGCGCCGCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: EGRDIPEQHARD*EVGEAADAPRH Trigger: GTGGCGCGGCGCATCCGCAGCTTCCCCGACTTCCCAATCCCGGGCGTGCTGTTCAGGGATATCTCGCCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS GCA 72 bp | GCACGCCCGGGATTGGGAAGTCGGGGAAGCTGCGGATaGGCCGCGCCACCAGTTTCAACTCAGGTTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: ARPGLGSRGSCG*AAPPVSTQVPT Trigger: TGTCGGAACCTGAGTTGAAACTGGTGGCGCGGCGCATCCGCAGCTTCCCCGACTTCCCAATCCCGGGCGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS TCA 72 bp | AGGAGTCCGGGTCTTTCAAGAGGGGCGAGATATCCCTaGACAGCACGCCCGGGATTGGGAAGTCGGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RSPGLSRGARYP*TARPGLGSRGS Trigger: GCTTCCCCGACTTCCCAATCCCGGGCGTGCTGTTCAGGGATATCTCGCCCCTCTTGAAAGACCCGGACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS CCA 72 bp | AGTCGATCTTGCCGCTGTGCGTGGACTTCAGGTGACTaGCCAAGAGGCGGATGGAAGCTCGGAAGGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SRSCRCAWTSGD*PRGGWKLGRSP Trigger: CGGACTCCTTCCGAGCTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS CCA 72 bp | TGTGCGTGGACTTCAGGTGACTGGCCAAGAGGCGGATaGAAGCTCGGAAGGAGTCCGGGTCTTTCAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CAWTSGDWPRGG*KLGRSPGLSRG Trigger: CCCTCTTGAAAGACCCGGACTCCTTCCGAGCTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006764.9 ENSMUST00000213029.2 |
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| CDS CCA 72 bp | ACTCGCCTGCGATGTAGTCGATCTTGCCGCTGTGCGTaGACTTCAGGTGACTGGCCAAGAGGCGGATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TRLRCSRSCRCA*TSGDWPRGGWK Trigger: CTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAGGCGAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213029.2 |
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| CDS GCA 72 bp | AGCCCCTGGAGTCTAGACCTGCGATGTAGTCGATCTTaGCGCTGTGCGTGGACTTCAGGTGACTGGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPWSLDLRCSRS*RCAWTSGDWPR Trigger: TCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAGGTCTAGACTCCAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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| CDS CCA 72 bp | CTAGACCTGCGATGTAGTCGATCTTGCCGCTGTGCGTaGACTTCAGGTGACTGGCCAAGAGGCGGATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LDLRCSRSCRCA*TSGDWPRGGWK Trigger: CTTCCATCCGCCTCTTGGCCAGTCACCTGAAGTCCACGCACAGCGGCAAGATCGACTACATCGCAGGTCTAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006764.9 |
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