Pregenerated sensors for APPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020263Ensembl transcript IDs: ENSMUST00000020500.14, ENSMUST00000146876.9, ENSMUST00000150685.8, ENSMUST00000176294.2, ENSMUST00000176675.8, ENSMUST00000177187.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGGGAGAACCATAGTGTCTGCCAGTTGCTTGGCCAGCTCTGTGTaGAGACCATTGAGCCTGGCTCAGGGCCTGGTCGCTGCACGCTCT | + |
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Preference number: 1 (lower is better) Translates to: TGRTIVSASCLASSV*RPLSLAQGLVAARS Trigger: AGAGCGTGCAGCGACCAGGCCCTGAGCCAGGCTCAATGGTCTCCACACAGAGCTGGCCAAGCAACTGGCAGACACTATGGTTCTCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR TCA 90 bp | TCAAGGGTTCCATCATGGCCGCCCGCTTGCGGTACTGCAGTGCGTTaGGTGCGCAGTAGTACTGAAGGGATGAGAGGTGCTGTTTCCGCC | + |
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Preference number: 1 (lower is better) Translates to: SRVPSWPPACGTAVR*VRSSTEGMRGAVSA Trigger: GGCGGAAACAGCACCTCTCATCCCTTCAGTACTACTGCGCACTCAACGCACTGCAGTACCGCAAGCGGGCGGCCATGATGGAACCCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR TCA 90 bp | CTTGCGGTACTGCAGTGCGTTGAGTGCGCAGTAGTACTGAAGGGATaGGAGGTGCTGTTTCCGCCGGGCAGCCGCCACCTCTTTCACAAT | + |
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Preference number: 1 (lower is better) Translates to: LAVLQCVECAVVLKG*EVLFPPGSRHLFHN Trigger: ATTGTGAAAGAGGTGGCGGCTGCCCGGCGGAAACAGCACCTCTCATCCCTTCAGTACTACTGCGCACTCAACGCACTGCAGTACCGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR GCA 90 bp | GGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTaGCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GTLSPISYCLPPKFL*QGIQGYTPHVIVGV Trigger: AACACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000177187.2 |
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| 3UTR GCA 90 bp | GCTCTCCTTCCCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATaGTTCAGATTCTGCGCCTCTGTTTTCACTTGGACTTCCGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: ALLPTCSDPRCPNEL*FRFCASVFTWTSAS Trigger: ACTGGCGGAAGTCCAAGTGAAAACAGAGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGGGAAGGAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR GCA 90 bp | TTCTCTCGAAACTGTATAACAGGGAGAACCATAGTGTCTGCCAGTTaGTTGGCCAGCTCTGTGTGGAGACCATTGAGCCTGGCTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: FSRNCITGRTIVSAS*LASSVWRPLSLAQG Trigger: GCCCTGAGCCAGGCTCAATGGTCTCCACACAGAGCTGGCCAAGCAACTGGCAGACACTATGGTTCTCCCTGTTATACAGTTTCGAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR GCA 90 bp | ACGTGCTCTGACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCTaGGCCTCTGTTTTCACTTGGACTTCCGCCAGTGTCATCTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: TCSDPRCPNELCFRF*ASVFTWTSASVICL Trigger: CAAGCAGATGACACTGGCGGAAGTCCAAGTGAAAACAGAGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR GCA 90 bp | TCCTTCTTCTTAGGGAGCCTGCTATACTTTGCCATTGACAGGTCGTaGTCGCTGCTGGCAAGTCCAAAGAGATCCTTCAAAGTGCTGACT | + |
|
Preference number: 1 (lower is better) Translates to: SFFLGSLLYFAIDRS*SLLASPKRSFKVLT Trigger: AGTCAGCACTTTGAAGGATCTCTTTGGACTTGCCAGCAGCGAGCACGACCTGTCAATGGCAAAGTATAGCAGGCTCCCTAAGAAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR GCA 90 bp | GTACACTCCGCACGTGATTGTCGGTGTTCTAAATTCAGGTCACTGTaGCTGTACGGCAGAGAAGTTGAAAACTGCTTAAGGAGTGGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: VHSARDCRCSKFRSL*LYGREVENCLRSGS Trigger: AGAGCCACTCCTTAAGCAGTTTTCAACTTCTCTGCCGTACAGGCACAGTGACCTGAATTTAGAACACCGACAATCACGTGCGGAGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
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| 3UTR-3UTR CCA 90 bp | CCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCTGCGCCTCTGGTGACCATGAGATaGGATTCGGTCATGCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PRALTPDAQMSYASDSAPLVTMR*DSVMRK Trigger: CTTCCGCATGACCGAATCCCATCTCATGGTCACCAG...AGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR CAA 90 bp | CTTCTCTCGAAACTGTATAACAGGGAGAACCATAGTGTCTGCCAGTaGCTTGGCCAGCTCTGTGTGGAGACCATTGAGCCTGGCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSKLYNRENHSVCQ*LGQLCVETIEPGSG Trigger: CCCTGAGCCAGGCTCAATGGTCTCCACACAGAGCTGGCCAAGCAACTGGCAGACACTATGGTTCTCCCTGTTATACAGTTTCGAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGCCAGTGTCATCTGCTTaGTCGTTTAACAGTACATAC | + |
|
Preference number: 2 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVPVSSA*SFNSTY Trigger: GTATGTACTGTTAAACGATCAAGCAGATGACACTGG...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGAGAGAAGTTGAAAACTaGTTAAGGAGTGGCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVREVEN*LRSGSP Trigger: AGGAGAGCCACTCCTTAAGCAGTTTTCAACTTCTCT...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTCCCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCAAATTCAGGTCACTGTaGCTGTACGGCAGAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: LLPTCSDPRCPNELCFRFKFRSL*LYGREV Trigger: AACTTCTCTGCCGTACAGGCACAGTGACCTGAATTT...GAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGGGAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCATTGGTTAGTGGTACAGACAGCATTAATCGAGCCAGTGCTTCTGGATCCCTCAAAACAGGCCCTTaGCACTTGAGTCTGAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: PSLVSGTDSINRASASGSLKTGP*HLSLRI Trigger: GATCCTCAGACTCAAGTGTCAAGGGCCTGTTTTGAG...GGATCCAGAAGCACTGGCTCGATTAATGCTGTCTGTACCACTAACCAATGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR-3UTR CCA 90 bp | CCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCTGCGCCTCATACTTTCCATCATTaGTTAGTGGTACAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PRALTPDAQMSYASDSAPHTFHH*LVVQTA Trigger: TGCTGTCTGTACCACTAACCAATGATGGAAAGTATG...AGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCGCCAGTGTCATCTGCTTGATCGTTTAACAGTACATACTTTCCATCATTGGATGCGGAAGATGTTGTaGATAGCTCGAGCAGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: FRQCHLLDRLTVHTFHHWMRKML*IARAAS Trigger: ACTGGCTGCTCGAGCTATTCACAACATCTTCCGCAT...CCAATGATGGAAAGTATGTACTGTTAAACGATCAAGCAGATGACACTGGCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTAAAACTGCTTAAGGAGTaGCTCTCCTTCCCACGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KAPKIAFVECRHALTHFLKLLKE*LSFPRA Trigger: AGCACGTGGGAAGGAGAGCCACTCCTTAAGCAGTTT...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTTTACCATTTATAAAAGGATCCTAGGAACTGAAGCGCTGCTATCCAAAAGAGAAGTTGAAAACTaGTTAAGGAGTGGCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QGFTIYKRILGTEALLSKREVEN*LRSGSP Trigger: AGGAGAGCCACTCCTTAAGCAGTTTTCAACTTCTCT...TTTGGATAGCAGCGCTTCAGTTCCTAGGATCCTTTTATAAATGGTAAAACCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| 3UTR-3UTR TCA 90 bp | TTTAAATTAATTGGTCCCTTTGAGGAAGGTCTGGCTCAGAAGAAACAGGAACTACCTGAAGCTTTTGAATaGAAGCTGGTTCAGAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: FKLIGPFEEGLAQKKQELPEAFE*KLVQKG Trigger: ACCTTTCTGAACCAGCTTTCATTCAAAAGCTTCAGG...TAGTTCCTGTTTCTTCTGAGCCAGACCTTCCTCAAAGGGACCAATTAATTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| 3UTR TCA 72 bp | CTGCAGTGCGTTGAGTGCGCAGTAGTACTGAAGGGATaGGAGGTGCTGTTTCCGCCGGGCAGCCGCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQCVECAVVLKG*EVLFPPGSRHL Trigger: GAGGTGGCGGCTGCCCGGCGGAAACAGCACCTCTCATCCCTTCAGTACTACTGCGCACTCAACGCACTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR TCA 72 bp | CCATCATGGCCGCCCGCTTGCGGTACTGCAGTGCGTTaGGTGCGCAGTAGTACTGAAGGGATGAGAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PSWPPACGTAVR*VRSSTEGMRGA Trigger: AGCACCTCTCATCCCTTCAGTACTACTGCGCACTCAACGCACTGCAGTACCGCAAGCGGGCGGCCATGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR GCA 72 bp | GGAGTGGCTCTCCTTCCCACGTGCTCTGACCCCCGATaGCCAAATGAGTTATGCTTCAGATTCTGCGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GVALLPTCSDPR*PNELCFRFCAS Trigger: AGAGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGGGAAGGAGAGCCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR GCA 72 bp | GACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCTaGGCCTCTGTTTTCACTTGGACTTCCGCCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: DPRCPNELCFRF*ASVFTWTSASV Trigger: GACACTGGCGGAAGTCCAAGTGAAAACAGAGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR GCA 72 bp | CCCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATaGTTCAGATTCTGCGCCTCTGTTTTCACTTGGACT | + |
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Preference number: 3 (lower is better) Translates to: PTCSDPRCPNEL*FRFCASVFTWT Trigger: AGTCCAAGTGAAAACAGAGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR GCA 72 bp | TCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTaGCAGGGCATCCAAGGGTACACTCCGCACGTGATT | + |
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Preference number: 3 (lower is better) Translates to: SPISYCLPPKFL*QGIQGYTPHVI Trigger: AATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000177187.2 |
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| 3UTR-3UTR CAA 90 bp | AGATTCTGCGCCTCTGTTTTCACTTGGACTTCCGCCAGTGTCATCTGCTTGATCGCTCAAAACAGGCCCTaGACACTTGAGTCTGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: RFCASVFTWTSASVICLIAQNRP*TLESED Trigger: ATCCTCAGACTCAAGTGTCAAGGGCCTGTTTTGAGC...GATCAAGCAGATGACACTGGCGGAAGTCCAAGTGAAAACAGAGGCGCAGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR TCA 72 bp | ACCATGAGATGGGATTCGGTCATGCGGAAGATGTTGTaGATAGCTCGAGCAGCCAGTACTTGTCTCATTGCC | + |
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Preference number: 3 (lower is better) Translates to: TMRWDSVMRKML*IARAASTCLIA Trigger: GGCAATGAGACAAGTACTGGCTGCTCGAGCTATTCACAACATCTTCCGCATGACCGAATCCCATCTCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| 3UTR GCA 72 bp | TTAGGGAGCCTGCTATACTTTGCCATTGACAGGTCGTaGTCGCTGCTGGCAAGTCCAAAGAGATCCTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LGSLLYFAIDRS*SLLASPKRSFK Trigger: TTTGAAGGATCTCTTTGGACTTGCCAGCAGCGAGCACGACCTGTCAATGGCAAAGTATAGCAGGCTCCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| 3UTR-3UTR CAA 90 bp | CGAACCAGAAACATCAAGGTAGAAACCAGAACTTCAAAGACAGCCCCACAGCCACTCACCCATTTCTTATaGTCTCCCTCCCAAGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: RTRNIKVETRTSKTAPQPLTHFL*SPSQVS Trigger: AGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAG...TGGCTGTGGGGCTGTCTTTGAAGTTCTGGTTTCTACCTTGATGTTTCTGGTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| 3UTR GCA 72 bp | GCACGTGATTGTCGGTGTTCTAAATTCAGGTCACTGTaGCTGTACGGCAGAGAAGTTGAAAACTGCTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: ARDCRCSKFRSL*LYGREVENCLR Trigger: CCTTAAGCAGTTTTCAACTTCTCTGCCGTACAGGCACAGTGACCTGAATTTAGAACACCGACAATCACGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGGTTTTACCATTTATAAAAGGATCCTAGGAACTGAAGCGCTGCTATCCAAACTCACCCATTTCTTATaGTCTCCCTCCCAAGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: QGFTIYKRILGTEALLSKLTHFL*SPSQVS Trigger: AGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAG...TTTGGATAGCAGCGCTTCAGTTCCTAGGATCCTTTTATAAATGGTAAAACCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000177187.2 |
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| 3UTR TCA 72 bp | CAGAGAAAGCATCTAAGAGGACCTGAAGCTTTTGAATaGAAGCTGGTTCAGAAAGGTTCTGTTGTAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: QRKHLRGPEAFE*KLVQKGSVVKA Trigger: AGCCTTTACAACAGAACCTTTCTGAACCAGCTTTCATTCAAAAGCTTCAGGTCCTCTTAGATGCTTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTCCTTCTGAGTTGCTTTCAAAAATGTATGTGCTCAGAGACTCTTCTCCTCCAGTACTTGTCTCATaGCCTCATAAATCACTTCAG | + |
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Preference number: 3 (lower is better) Translates to: FSPSELLSKMYVLRDSSPPVLVS*PHKSLQ Trigger: CTGAAGTGATTTATGAGGCAATGAGACAAGTACTGG...AGGAGAAGAGTCTCTGAGCACATACATTTTTGAAAGCAACTCAGAAGGAGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTACAGCGCCCCGGGGCTaGCACATGAGGTTCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSQVSVPGHPRVHSARDCTAPRG*HMRFPP Trigger: AGGCGGGAACCTCATGTGCCAGCCCCGGGGCGCTGT...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR TCA 90 bp | CTTGGCCAGCTCTGTGTGGAGACCATTGAGCCTGGCTCAGGGCCTGGTCGCTGCTGCCTGGAAAGCTGCTaGGTGGCCAGGCACATTTCA | + |
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Preference number: 4 (lower is better) Translates to: LGQLCVETIEPGSGPGRCCLESC*VARHIS Trigger: TGAAATGTGCCTGGCCACTCAGCAGCTTTCCAGGCA...GCAGCGACCAGGCCCTGAGCCAGGCTCAATGGTCTCCACACAGAGCTGGCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS-3UTR TCA 90 bp | CCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTTCCCGCCTTGGGTaGAGAAGTACAGCCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PPKFLCQGIQGYTPHVIVGSRLG*RSTASP Trigger: GGGAGAGGCTGTACTTCTTCACCCAAGGCGGGAACC...GACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CCA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGTTCCCGGTTTGCCACTaGGCGTGGAGATCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVFPVCH*AWRSGS Trigger: GCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAA...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CCA 90 bp | CCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCCATAGACACGCTGCATaGCCTGCAGCAGCTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPKFLCQGIQGYTPHVIVHRHAA*PAAAGW Trigger: CCAACCAGCTGCTGCAGGCCATGCAGCGTGTCTATG...GACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CCA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGCTGCCACCCCTGTTCTaGTCAAGGAATTCTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVLPPLF*SRNSVA Trigger: GGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAG...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
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| CDS-3UTR CCA 90 bp | TTGGCCAGCTCTGTGTGGAGACCATTGAGCCTGGCTCAGGGCCTGGTCGCTGCATGGTACCAGCAGTACTaGAGCTCTCATCCATCACTT | + |
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Preference number: 4 (lower is better) Translates to: LASSVWRPLSLAQGLVAAWYQQY*SSHPSL Trigger: AAGTGATGGATGAGAGCTCCAGTACTGCTGGTACCA...TGCAGCGACCAGGCCCTGAGCCAGGCTCAATGGTCTCCACACAGAGCTGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS-3UTR TCA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGCTCAAAACAGGCCCTTaGCACTTGAGTCTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVLKTGP*HLSLRI Trigger: GATCCTCAGACTCAAGTGTCAAGGGCCTGTTTTGAG...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR GCA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCAACTTGATGGCTACTaGCTCTGGGTTGTCCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PSQVSVPGHPRVHSARDCQLDGY*LWVVRQ Trigger: CTGACGGACAACCCAGAGGCAGTAGCCATCAAGTTG...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CCA 90 bp | AGCCTGCTATACTTTGCCATTGACAGGTCGTGCTCGCTGCTGGCAAGTCCAAAGCATAGACACGCTGCATaGCCTGCAGCAGCTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLLYFAIDRSCSLLASPKHRHAA*PAAAGW Trigger: CCAACCAGCTGCTGCAGGCCATGCAGCGTGTCTATG...CTTTGGACTTGCCAGCAGCGAGCACGACCTGTCAATGGCAAAGTATAGCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS-3UTR CCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTTTGGCCAGCTCTGTGTaGAGACCATTGAGCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGLASSV*RPLSSS Trigger: GGATGAGCTCAATGGTCTCCACACAGAGCTGGCCAA...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CCA 90 bp | TCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATGTTTGCCACTGGGCGTaGAGATCTGGAAGCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SPSQVSVPGHPRVHSARDVCHWA*RSGSSI Trigger: GATACTGCTTCCAGATCTCCACGCCCAGTGGCAAAC...ATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CCA 90 bp | TCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATCTGCCACCCCTGTTCTaGTCAAGGAATTCTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSQVSVPGHPRVHSARDLPPLF*SRNSVA Trigger: GGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAG...ATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTATGCGGAAGATGTTGTaGATAGCTCGAGCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGMRKML*IARAAS Trigger: ACTGGCTGCTCGAGCTATTCACAACATCTTCCGCAT...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTAGGTTCCTGTTGATCTaGGCTGTGGCCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGRFLLI*AVATSM Trigger: CATTGATGTGGCCACAGCGCAGATCAACAGGAACCT...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATCGAACGATGAACATCTaGTGCAGAAGAGAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSQVSVPGHPRVHSARDRTMNI*CRRESA Trigger: GGCAGACTCTCTTCTGCAGCAGATGTTCATCGTTCG...ATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGAGCCGTCCATACTTTTaGAGAACATCTCTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVSRPYF*RTSLLL Trigger: GAGGAGCAGAGATGTTCTCCAAAAGTATGGACGGCT...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTAAGTTGATCTGTCCGTaGGCAAAGCCTATCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSQVSVPGHPRVHSARDCKLICP*AKPIKG Trigger: ACCCTTGATAGGCTTTGCCCACGGACAGATCAACTT...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | TCACTGTGCCTGTACGGCAGAGAAGTTGAAAACTGCTTAAGGAGTGGCTCTCCTTGCCTGGAAAGCTGCTaGGTGGCCAGGCACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCLYGREVENCLRSGSPCLESC*VARHIS Trigger: TGAAATGTGCCTGGCCACTCAGCAGCTTTCCAGGCA...AGGAGAGCCACTCCTTAAGCAGTTTTCAACTTCTCTGCCGTACAGGCACAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTACGATGAACATCTGCTaGAGAAGAGAGTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGTMNIC*RRESSA Trigger: AGCAGAAGACTCTCTTCTGCAGCAGATGTTCATCGT...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATCGAACGATGAACATCTaGTGCAGAAGAGAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSQVSVPGHPRVHSARDRTMNI*CRRESS Trigger: AGAAGACTCTCTTCTGCAGCAGATGTTCATCGTTCG...ATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTTCAGGTAGATCTGCCTaGAGATGTTGTTTACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGSGRSA*RCCLLH Trigger: GTGCAGTAAACAACATCTCCAGGCAGATCTACCTGA...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | GAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGGGTACTGCAGTGCGTTaGGTGCGCAGTAGTACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECRHALTHFLLSPSQVSVGTAVR*VRSSTE Trigger: TTCAGTACTACTGCGCACTCAACGCACTGCAGTACC...CACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCCCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCCCAAAAACCGAACGATaGACATCTGCTGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPTCSDPRCPNELCFRFPKTER*TSAAEE Trigger: CTCTTCTGCAGCAGATGTTCATCGTTCGGTTTTTGG...GAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGGGAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTCCAGTGTCATCTGCTTaGTCGTTTAACAGTACATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPKFLCQGIQGYTPHVIPVSSA*SFNSTY Trigger: GTATGTACTGTTAAACGATCAAGCAGATGACACTGG...AATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCCTTCTTCATCGCCTTTaGCCAGTGCAAAATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPKFLCQGIQGYTPHVIVLLHRL*PVQNSV Trigger: AACAGAATTTTGCACTGGGCAAAGGCGATGAAGAAG...GACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | GAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGACCGAAAGCAACTCTTaGTGGGACACCCGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECRHALTHFLLSPSQVSVTESNS*WDTRIL Trigger: CAAGATGCGGGTGTCCCAGCAAGAGTTGCTTTCGGT...CACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTTTATGCTTCAGATTCTaGGCCTCTGTTTTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGLCFRF*ASVFTW Trigger: CCAAGTGAAAACAGAGGCGCAGAATCTGAAGCATAA...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTGTTTGGAAAGCTGCTGAGTaGCCAGGCACATTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFLCQGIQGYTPHVIVGVWKAAE*PGTFHS Trigger: AGAATGAAATGTGCCTGGCCACTCAGCAGCTTTCCA...AACACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCTATACTTTGCCATTGACAGGTCGTGCTCGCTGCTGGCAAGTCCAAAGTGGAAAGCTGCTGAGTaGCCAGGCACATTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYFAIDRSCSLLASPKWKAAE*PGTFHS Trigger: AGAATGAAATGTGCCTGGCCACTCAGCAGCTTTCCA...CTTTGGACTTGCCAGCAGCGAGCACGACCTGTCAATGGCAAAGTATAGCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGCCTGTGTGGAGACCATTaGGCTCATCCATCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGTLSPISYCLPPKFLCLCGDH*AHPSLW Trigger: CCAAAGTGATGGATGAGCTCAATGGTCTCCACACAG...GCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTCTTCATATTCCTTCCTaGTCTCTGCTTGGAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LPPKFLCQGIQGYTPHVILHIPS*SLLGEL Trigger: TAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAG...AATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTCATACTTTCCATCATTaGTTAGTGGTACAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPKFLCQGIQGYTPHVIHTFHH*LVVQTA Trigger: TGCTGTCTGTACCACTAACCAATGATGGAAAGTATG...AATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTATCGCCTTTGCCCAGTaGAAAATTCTGTTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGIAFAQ*KILFFI Trigger: TATGAAAAACAGAATTTTGCACTGGGCAAAGGCGAT...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | GAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGTTCCTTCCTGCTCTCTaGTTGGAGAATTATTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ECRHALTHFLLSPSQVSVFLPAL*LENYSR Trigger: CCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAA...CACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | AGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGCAATGGGTGTCCCAGGTaGAATCAGTTCCTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVGTLSPISYCLPPKFLCNGCPR*NQFLCF Trigger: GAAACAGAGGAACTGATTGCACCTGGGACACCCATT...GCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCAGTACTTGTCTCATTGCCTCATAAATCACTTCAGCCGTGCTGTCTGTACGATGAACATCTGCTaGAGAAGAGAGTCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSQYLSHCLINHFSRAVCTMNIC*RRESAT Trigger: GGTGGCAGACTCTCTTCTGCAGCAGATGTTCATCGT...ACAGACAGCACGGCTGAAGTGATTTATGAGGCAATGAGACAAGTACTGGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
||
| 3UTR CAA 72 bp | GCGGAAGATGTTGTGAATAGCTCGAGCAGCCAGTACTaGTCTCATTGCCTCATAAATCACTTCAGCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AEDVVNSSSSQY*SHCLINHFSRA Trigger: AGCACGGCTGAAGTGATTTATGAGGCAATGAGACAAGTACTGGCTGCTCGAGCTATTCACAACATCTTCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCCTGCTATACTTTGCCATTGACAGGTCGTGCTCGCTGCTGGCAAGTCCAAATCGCCTTTGCCCAGTaGAAAATTCTGTTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GACYTLPLTGRARCWQVQIAFAQ*KILFFI Trigger: TATGAAAAACAGAATTTTGCACTGGGCAAAGGCGAT...TTGGACTTGCCAGCAGCGAGCACGACCTGTCAATGGCAAAGTATAGCAGGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
||
| CDS-3UTR GCA 90 bp | CCACGTGCTCTGACCCCCGATGCCCAAATGAGTTATGCTTCAGATTCTGCGCCTGTCAAGGAATTCTGTTaGCGGAAGTACAATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRALTPDAQMSYASDSAPVKEFC*RKYNIK Trigger: TTTGATATTGTACTTCCGGCAACAGAATTCCTTGAC...AGGCGCAGAATCTGAAGCATAACTCATTTGGGCATCGGGGGTCAGAGCACGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTTTTACCATTTATAAAAGGATCCTAGGAACTGAAGCGCTGCTATCCAAAGTAGTACTGAAGGGATaGGAGGTGCTGTTTCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGFTIYKRILGTEALLSKVVLKG*EVLFPP Trigger: CGGCGGAAACAGCACCTCTCATCCCTTCAGTACTAC...TTTGGATAGCAGCGCTTCAGTTCCTAGGATCCTTTTATAAATGGTAAAACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTACAGTTGTCCAGGTCCTaGATCAAGCCTCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KAPKIAFVECRHALTHFLQLSRS*IKPPAT Trigger: TGTGGCTGGAGGCTTGATTCAGGACCTGGACAACTG...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTACACCCGCATCTTGTCTaGCTCAGCTTCCAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAPKIAFVECRHALTHFLHPHLV*LSFQFH Trigger: GTGGAACTGGAAGCTGAGGCAGACAAGATGCGGGTG...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | GAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGAGGAATGCTGGCTGTTaGTTTGGGAACAATATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ECRHALTHFLLSPSQVSVRNAGC*FGNNIV Trigger: GACAATATTGTTCCCAAAGCAACAGCCAGCATTCCT...CACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | CGAACCAGAAACATCAAGGTAGAAACCAGAACTTCAAAGACAGCCCCACAGCCAATTCTGTTTTTCATATaGCAGCAGCTGCCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTRNIKVETRTSKTAPQPILFFI*QQLPGK Trigger: CTTTCCAGGCAGCTGCTGGCATATGAAAAACAGAAT...TGGCTGTGGGGCTGTCTTTGAAGTTCTGGTTTCTACCTTGATGTTTCTGGTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | TTCGCCTTCTCGTTCTCCTTCTTCTTAGGGAGCCTGCTATACTTTGCCATTGACATTCTGTTTTTCATATaGCAGCAGCTGCCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FAFSFSFFLGSLLYFAIDILFFI*QQLPGK Trigger: CTTTCCAGGCAGCTGCTGGCATATGAAAAACAGAAT...GTCAATGGCAAAGTATAGCAGGCTCCCTAAGAAGAAGGAGAACGAGAAGGCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCTGGTGACCATGAGATaGGATTCGGTCATGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKIAFVECRHALTHFLLSLVTMR*DSVMRK Trigger: CTTCCGCATGACCGAATCCCATCTCATGGTCACCAG...AGACAATAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | TCACTGTGCCTGTACGGCAGAGAAGTTGAAAACTGCTTAAGGAGTGGCTCTCCTGCTTCTGGATCCTTTTaGACCTCAATAATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCLYGREVENCLRSGSPASGSF*TSIISF Trigger: GAAAGAAATTATTGAGGTTCAAAAGGATCCAGAAGC...AGGAGAGCCACTCCTTAAGCAGTTTTCAACTTCTCTGCCGTACAGGCACAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | GAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGGGAGATGTTGTTTACTaGACATATCCACTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ECRHALTHFLLSPSQVSVGDVVY*TYPLFI Trigger: TATGAAGAGTGGATATGTGCAGTAAACAACATCTCC...CACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR GCA 90 bp | TCACTGTGCCTGTACGGCAGAGAAGTTGAAAACTGCTTAAGGAGTGGCTCTCCTGTCAAGGAATTCTGTTaGCGGAAGTACAATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLCLYGREVENCLRSGSPVKEFC*RKYNIK Trigger: TTTGATATTGTACTTCCGGCAACAGAATTCCTTGAC...AGGAGAGCCACTCCTTAAGCAGTTTTCAACTTCTCTGCCGTACAGGCACAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
||
| 3UTR CAA 72 bp | TTTCAAGACCTTTACTTCATAATTAGGGGTTGGAGATaGGTCCAGGACCCCACGAACCAGAAACATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQDLYFIIRGWR*VQDPTNQKHQG Trigger: ACCTTGATGTTTCTGGTTCGTGGGGTCCTGGACCAATCTCCAACCCCTAATTATGAAGTAAAGGTCTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | CAGGGTTTTACCATTTATAAAAGGATCCTAGGAACTGAAGCGCTGCTATCCAAACCAAAAACCGAACGATaGACATCTGCTGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGFTIYKRILGTEALLSKPKTER*TSAAEE Trigger: CTCTTCTGCAGCAGATGTTCATCGTTCGGTTTTTGG...TTTGGATAGCAGCGCTTCAGTTCCTAGGATCCTTTTATAAATGGTAAAACCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | TTTAAATTAATTGGTCCCTTTGAGGAAGGTCTGGCTCAGAAGAAACAGGAACTAGAAAGCAACTCTTGCTaGGACACCCGCATCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKLIGPFEEGLAQKKQELESNSC*DTRILS Trigger: AGACAAGATGCGGGTGTCCCAGCAAGAGTTGCTTTC...TAGTTCCTGTTTCTTCTGAGCCAGACCTTCCTCAAAGGGACCAATTAATTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | GAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGTTTTTATGTTTTGACTaGAGCAGGAGCTTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ECRHALTHFLLSPSQVSVFLCFD*SRSFLV Trigger: AACAAGAAAGCTCCTGCTCCAGTCAAAACATAAAAA...CACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTATTCCTGCTCTCTGCTTaGAGAATTATTCCCGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAPKIAFVECRHALTHFLFLLSA*RIIPGL Trigger: CAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAA...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | CCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTTGTCTTAACTGCCATTaGTCCCAAAAACCGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKIAFVECRHALTHFLLSCLNCH*SQKPND Trigger: ATCGTTCGGTTTTTGGGATCAATGGCAGTTAAGACA...AGACAATAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR TCA 90 bp | TTTAAATTAATTGGTCCCTTTGAGGAAGGTCTGGCTCAGAAGAAACAGGAACTATGTAAACAGATTCACTaGCCGAAAGCAACTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKLIGPFEEGLAQKKQELCKQIH*PKATLA Trigger: AGCAAGAGTTGCTTTCGGTCAGTGAATCTGTTTACA...TAGTTCCTGTTTCTTCTGAGCCAGACCTTCCTCAAAGGGACCAATTAATTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTATGCTGGCTGTTGCTTTaGGAACAATATTGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAPKIAFVECRHALTHFLCWLLL*EQYCHL Trigger: AAGATGACAATATTGTTCCCAAAGCAACAGCCAGCA...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR GCA 90 bp | CAGGGTTTTACCATTTATAAAAGGATCCTAGGAACTGAAGCGCTGCTATCCAAATTTGGAGAACATCTCTaGTCCTCTCTTGAAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGFTIYKRILGTEALLSKFGEHL*SSLEKV Trigger: AACTTTTTCAAGAGAGGAGCAGAGATGTTCTCCAAA...TTTGGATAGCAGCGCTTCAGTTCCTAGGATCCTTTTATAAATGGTAAAACCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | CCTCCAGCCACAGCGCCCCGGGGCTGGCACATGAGGTTCCCGCCTTaGGTGAAGAAGTACAGCCTCTCCCACGTGGTGGTGACCAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPATAPRGWHMRFPP*VKKYSLSHVVVTSP Trigger: CGGACTGGTCACCACCACGTGGGAGAGGCTGTACTTCTTCACCCAAGGCGGGAACCTCATGTGCCAGCCCCGGGGCGCTGTGGCTGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTGTGTCTGCCAGTTGCTaGGCCAGCTCTGTGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGVSASC*ASSVWR Trigger: TCTCCACACAGAGCTGGCCAAGCAACTGGCAGACAC...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTTGGGACACCCGCATCTaGTCTGCCTCAGCTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSQVSVPGHPRVHSARDCWDTRI*SASASS Trigger: ACTGGAAGCTGAGGCAGACAAGATGCGGGTGTCCCA...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTGACCGAAAGCAACTCTaGCTGGGACACCCGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGDRKQL*LGHPHL Trigger: AAGATGCGGGTGTCCCAGCAAGAGTTGCTTTCGGTC...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | TCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGGATGAGGTTCCTGTaGATCTGCGCTGTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPSQVSVPGHPRVHSARDWMRFL*ICAVAT Trigger: TGTGGCCACAGCGCAGATCAACAGGAACCTCATCCA...ATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 90 bp | CATAGACACGCTGCATGGCCTGCAGCAGCTGGTTGGTGTAATCTGTaGGGGTGCCAGCATCTTCTTCAAATACACTCAGCAAGGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: HRHAAWPAAAGWCNL*GCQHLLQIHSARSA Trigger: CGCGCTCCTTGCTGAGTGTATTTGAAGAAGATGCTGGCACCCTCACAGATTACACCAACCAGCTGCTGCAGGCCATGCAGCGTGTCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 ENSMUST00000150685.8 ENSMUST00000176294.2 |
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| CDS CCA 90 bp | TCCTGCTCTCTGCTTGGAGAATTATTCCCGGTTTGCCACTGGGCGTaGAGATCTGGAAGCAGTATCGTCGGTCTTCACAATCCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCSLLGELFPVCHWA*RSGSSIVGLHNPRP Trigger: TGGCCGTGGATTGTGAAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGCTTCCTGCTCTCTGCTaGGAGAATTATTCCCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVLPALC*ENYSRF Trigger: AAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAG...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGCTCAAAACAGGCCCTaGACACTTGAGTCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PPKFLCQGIQGYTPHVIVAQNRP*TLESED Trigger: ATCCTCAGACTCAAGTGTCAAGGGCCTGTTTTGAGC...GACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 90 bp | TCTGCGCTGTGGCCACATCAATGTCCGGAGTGTAAACAGATTCACTaGCCGAAAGCAACTCTTGCTGGGACACCCGCATCTTGTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SALWPHQCPECKQIH*PKATLAGTPASCLP Trigger: AGGCAGACAAGATGCGGGTGTCCCAGCAAGAGTTGCTTTCGGTCAGTGAATCTGTTTACACTCCGGACATTGATGTGGCCACAGCGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 90 bp | AGGGTTGGTGCGCCTGCCACCCCTGTTCTGGTCAAGGAATTCTGTTaGCGGAAGTACAATATCAAACTGAATGGGTGTCCCAGGTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVGAPATPVLVKEFC*RKYNIKLNGCPRCN Trigger: ATTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGGCGCACCAACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | AGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGCCATAGTGTCTGCCAGTaGCTTGGCCAGCTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVGTLSPISYCLPPKFLCHSVCQ*LGQLCV Trigger: CACACAGAGCTGGCCAAGCAACTGGCAGACACTATG...GCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTATCTGCCTGGAGATGTaGTTTACTGCACATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSQVSVPGHPRVHSARDCICLEM*FTAHIH Trigger: GTGGATATGTGCAGTAAACAACATCTCCAGGCAGAT...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | TCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTATCAACCTCAGAGTTaGACTGGTGACCATGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPSQVSVPGHPRVHSARDYQPQS*TGDHEM Trigger: CATCTCATGGTCACCAGTCAAACTCTGAGGTTGATA...ATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 90 bp | CTTCATATTCCTTCCTGCTCTCTGCTTGGAGAATTATTCCCGGTTTaGCACTGGGCGTGGAGATCTGGAAGCAGTATCGTCGGTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHIPSCSLLGELFPV*HWAWRSGSSIVGLH Trigger: GTGAAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | AATTCTGTTTTTCATATGCCAGCAGCTGCCTGGAAAGCTGCTGAGTaGCCAGGCACATTTCATTCTGTGCGCCATAGACACGCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NSVFHMPAAAWKAAE*PGTFHSVRHRHAAW Trigger: CCATGCAGCGTGTCTATGGCGCACAGAATGAAATGTGCCTGGCCACTCAGCAGCTTTCCAGGCAGCTGCTGGCATATGAAAAACAGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 ENSMUST00000150685.8 |
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| CDS CCA 90 bp | ATTCCTTCCTGCTCTCTGCTTGGAGAATTATTCCCGGTTTGCCACTaGGCGTGGAGATCTGGAAGCAGTATCGTCGGTCTTCACAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPSCSLLGELFPVCH*AWRSGSSIVGLHNP Trigger: TGGATTGTGAAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | GCACGCTCTTTCCTGCATTCTCCACGTTTCCTACGGCAGTCACACTGCTCAGTCACTTCTTCATCGCCTTaGCCCAGTGCAAAATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSFLHSPRFLRQSHCSVTSSSP*PSAKFC Trigger: ACAGAATTTTGCACTGGGCAAAGGCGATGAAGAAGT...GACTGAGCAGTGTGACTGCCGTAGGAAACGTGGAGAATGCAGGAAAGAGCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS-3UTR CAA 90 bp | CCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTATGCTGGCTGTTGCTTaGGGAACAATATTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PKFLCQGIQGYTPHVIVGMLAVA*GTILSS Trigger: AGATGACAATATTGTTCCCAAAGCAACAGCCAGCAT...ACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTGGTCAAGGAATTCTGTaGCCGGAAGTACAATATCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSQVSVPGHPRVHSARDCGQGIL*PEVQYQ Trigger: TTGATATTGTACTTCCGGCAACAGAATTCCTTGACC...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000176675.8 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCCAGTACTTGTCTCATaGCCTCATAAATCACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSQVSVPGHPRVHSARDCPVLVS*PHKSLQ Trigger: CTGAAGTGATTTATGAGGCAATGAGACAAGTACTGG...ACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | CTTTGCCCAGTGCAAAATTCTGTTTTTCATATGCCAGCAGCTGCCTaGAAAGCTGCTGAGTGGCCAGGCACATTTCATTCTGTGCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCPVQNSVFHMPAAA*KAAEWPGTFHSVRH Trigger: ATGGCGCACAGAATGAAATGTGCCTGGCCACTCAGCAGCTTTCCAGGCAGCTGCTGGCATATGAAAAACAGAATTTTGCACTGGGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 ENSMUST00000150685.8 |
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| CDS-3UTR CAA 90 bp | AAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCGGTGTTACTTCTTCATCGCCTTaGCCCAGTGCAAAATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KFLCQGIQGYTPHVIVGVTSSSP*PSAKFC Trigger: ACAGAATTTTGCACTGGGCAAAGGCGATGAAGAAGT...AACACCGACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | TGTCTCCCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGGCTTTGGGAACAATATaGTCATCTTCTATGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CLPPKFLCQGIQGYTPHVALGTI*SSSMSE Trigger: TTCAGACATAGAAGATGACAATATTGTTCCCAAAGC...CACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCTCCCAAGTTTCTGTGCCAGGGCATCCAAGGGTACACTCCGCACGTGATTGTCCAGTCTTTTGTTTTCTaGATGAGCAGCAAACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPKFLCQGIQGYTPHVIVQSFVF*MSSKLC Trigger: ACACAGTTTGCTGCTCATCAAGAAAACAAAAGACTG...GACAATCACGTGCGGAGTGTACCCTTGGATGCCCTGGCACAGAAACTTGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000177187.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCCTGCTATACTTTGCCATTGACAGGTCGTGCTCGCTGCTGGCAAGTCCAATTATACTTCCAGTATaGCAGAAGGGTCTCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSLLYFAIDRSCSLLASPIILPV*QKGLLV Trigger: TACCAAGAGACCCTTCTGCAATACTGGAAGTATAAT...TGGACTTGCCAGCAGCGAGCACGACCTGTCAATGGCAAAGTATAGCAGGCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS GCA 90 bp | TTCTCTCGAAACTGTATAACAGGGAGAACCATAGTGTCTGCCAGTTaGTTGGCCAGCTCTGTGTGGAGACCATTGAGCTCATCCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSRNCITGRTIVSAS*LASSVWRPLSSSIT Trigger: AGTGATGGATGAGCTCAATGGTCTCCACACAGAGCTGGCCAAGCAACTGGCAGACACTATGGTTCTCCCTGTTATACAGTTTCGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 |
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| CDS GCA 90 bp | CTCTGGGTTGTCCGTCAGGTAGATCTGCCTGGAGATGTTGTTTACTaGACATATCCACTCTTCATATTCCTTCCTGCTCTCTGCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWVVRQVDLPGDVVY*TYPLFIFLPALCLE Trigger: CTCCAAGCAGAGAGCAGGAAGGAATATGAAGAGTGGATATGTGCAGTAAACAACATCTCCAGGCAGATCTACCTGACGGACAACCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 90 bp | GTCTTAACTGCCATTGATCCCAAAAACCGAACGATGAACATCTGCTaGAGAAGAGAGTCTTCTGCTTCAGGGAATGAGCCATCCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLTAIDPKNRTMNIC*RRESSASGNEPSSV Trigger: GACGGAGGATGGCTCATTCCCTGAAGCAGAAGACTCTCTTCTGCAGCAGATGTTCATCGTTCGGTTTTTGGGATCAATGGCAGTTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | TTGACTGGAGCAGGAGCTTTCTTGTTTCTTCCCAAAGCTTGTAATTaGCGTCACCGCCTGAAGAGCCGTCTGATTCAACTTGATGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LTGAGAFLFLPKACN*RHRLKSRLIQLDGY Trigger: GTAGCCATCAAGTTGAATCAGACGGCTCTTCAGGCGGTGACGCCAATTACAAGCTTTGGGAAGAAACAAGAAAGCTCCTGCTCCAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | AGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGCAAGCCGTCCATACTTTaGGAGAACATCTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVGTLSPISYCLPPKFLCKPSIL*ENISAP Trigger: AGGAGCAGAGATGTTCTCCAAAAGTATGGACGGCTT...GCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 90 bp | GTTGTTTACTGCACATATCCACTCTTCATATTCCTTCCTGCTCTCTaGTTGGAGAATTATTCCCGGTTTGCCACTGGGCGTGGAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVYCTYPLFIFLPAL*LENYSRFATGRGDL Trigger: CAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAGAGTGGATATGTGCAGTAAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 90 bp | TTCTGTTGCCGGAAGTACAATATCAAACTGAATGGGTGTCCCAGGTaGAATCAGTTCCTCTGTTTCAGGAATGCTGGCTGTTGCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FCCRKYNIKLNGCPR*NQFLCFRNAGCCFG Trigger: CCCAAAGCAACAGCCAGCATTCCTGAAACAGAGGAACTGATTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 90 bp | GCGGAAGATGTTGTGAATAGCTCGAGCAGCCAGTACTTGTCTCATTaGCTCATAAATCACTTCAGCCGTGCTGTCTGTCTTAACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AEDVVNSSSSQYLSH*LINHFSRAVCLNCH Trigger: ATGGCAGTTAAGACAGACAGCACGGCTGAAGTGATTTATGAGGCAATGAGACAAGTACTGGCTGCTCGAGCTATTCACAACATCTTCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | TTTACTGCACATATCCACTCTTCATATTCCTTCCTGCTCTCTGCTTaGAGAATTATTCCCGGTTTGCCACTGGGCGTGGAGATCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTAHIHSSYSFLLSA*RIIPGLPLGVEIWK Trigger: CTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAGAGTGGATATGTGCAGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 90 bp | TGCCTCATAAATCACTTCAGCCGTGCTGTCTGTCTTAACTGCCATTaGTCCCAAAAACCGAACGATGAACATCTGCTGCAGAAGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CLINHFSRAVCLNCH*SQKPNDEHLLQKRV Trigger: GACTCTCTTCTGCAGCAGATGTTCATCGTTCGGTTTTTGGGATCAATGGCAGTTAAGACAGACAGCACGGCTGAAGTGATTTATGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | TCTGGTCAAGGAATTCTGTTGCCGGAAGTACAATATCAAACTGAATaGGTGTCCCAGGTGCAATCAGTTCCTCTGTTTCAGGAATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGQGILLPEVQYQTE*VSQVQSVPLFQECW Trigger: CCAGCATTCCTGAAACAGAGGAACTGATTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 90 bp | CTGTTCTGGTCAAGGAATTCTGTTGCCGGAAGTACAATATCAAACTaGATGGGTGTCCCAGGTGCAATCAGTTCCTCTGTTTCAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: LFWSRNSVAGSTISN*MGVPGAISSSVSGM Trigger: CATTCCTGAAACAGAGGAACTGATTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | AGCAGCCAGTACTTGTCTCATTGCCTCATAAATCACTTCAGCCGTGCTGTCTGTGGTCAAGGAATTCTGTaGCCGGAAGTACAATATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSQYLSHCLINHFSRAVCGQGIL*PEVQYQ Trigger: TTGATATTGTACTTCCGGCAACAGAATTCCTTGACC...ACAGACAGCACGGCTGAAGTGATTTATGAGGCAATGAGACAAGTACTGGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| CDS-3UTR CAA 90 bp | AGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTCCCTCCCAAGTTTCTGTGCCAGTCTTTTGTTTTCTaGATGAGCAGCAAACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVGTLSPISYCLPPKFLCQSFVF*MSSKLC Trigger: ACACAGTTTGCTGCTCATCAAGAAAACAAAAGACTG...GCACAGAAACTTGGGAGGGAGACAATAAGAAATGGGTGAGAGCGTGCCTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000177187.2 |
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| CDS-3UTR CAA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTAGGAGCAGGAGCTTTCTaGTTTCTTCCCAAAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KAPKIAFVECRHALTHFLGAGAF*FLPKAC Trigger: ACAAGCTTTGGGAAGAAACAAGAAAGCTCCTGCTCC...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | CCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTATTGTCTATCTCTGCTCCTCTCTaGAAAAAGTTGATCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PKIAFVECRHALTHFLLSISAPL*KKLICP Trigger: CGGACAGATCAACTTTTTCAAGAGAGGAGCAGAGAT...AGACAATAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS-3UTR CAA 90 bp | AAAGCACCTAAAATAGCATTTGTAGAGTGTAGGCACGCTCTCACCCATTTCTTACAGGAATGCTGGCTGTaGCTTTGGGAACAATATTGT | + |
|
Preference number: 5 (lower is better) Translates to: KAPKIAFVECRHALTHFLQECWL*LWEQYC Trigger: ACAATATTGTTCCCAAAGCAACAGCCAGCATTCCTG...TAAGAAATGGGTGAGAGCGTGCCTACACTCTACAAATGCTATTTTAGGTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 90 bp | AAAAGCTGGAGTTTATTATACTTCCAGTATTGCAGAAGGGTCTCTTaGTACCAGCAGTACTGGAGCTCTCATCCATCACTTTGGAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KSWSLLYFQYCRRVS*YQQYWSSHPSLWKN Trigger: ATTTTTCCAAAGTGATGGATGAGAGCTCCAGTACTGCTGGTACCAAGAGACCCTTCTGCAATACTGGAAGTATAATAAACTCCAGCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS CAA 90 bp | GCCTCCAGCCACAGCGCCCCGGGGCTGGCACATGAGGTTCCCGCCTaGGGTGAAGAAGTACAGCCTCTCCCACGTGGTGGTGACCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASSHSAPGLAHEVPA*GEEVQPLPRGGDQS Trigger: GGACTGGTCACCACCACGTGGGAGAGGCTGTACTTCTTCACCCAAGGCGGGAACCTCATGTGCCAGCCCCGGGGCGCTGTGGCTGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | ACAGCGCCCCGGGGCTGGCACATGAGGTTCCCGCCTTaGGTGAAGAAGTACAGCCTCTCCCACGTGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TAPRGWHMRFPP*VKKYSLSHVVV Trigger: CACCACCACGTGGGAGAGGCTGTACTTCTTCACCCAAGGCGGGAACCTCATGTGCCAGCCCCGGGGCGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | CACAGCGCCCCGGGGCTGGCACATGAGGTTCCCGCCTaGGGTGAAGAAGTACAGCCTCTCCCACGTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: HSAPGLAHEVPA*GEEVQPLPRGG Trigger: ACCACCACGTGGGAGAGGCTGTACTTCTTCACCCAAGGCGGGAACCTCATGTGCCAGCCCCGGGGCGCTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | GGAAAGCTGCTGAGTGGCCAGGCACATTTCATTCTGTaGGCCATAGACACGCTGCATGGCCTGCAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GKLLSGQAHFIL*AIDTLHGLQQL Trigger: CAGCTGCTGCAGGCCATGCAGCGTGTCTATGGCGCACAGAATGAAATGTGCCTGGCCACTCAGCAGCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 ENSMUST00000150685.8 |
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| CDS CCA 72 bp | CAGGGAATGAGCCATCCTCCGTCTCACCGAAAGGGTTaGTGCGCCTGCCACCCCTGTTCTGGTCAAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: QGMSHPPSHRKG*CACHPCSGQGI Trigger: AATTCCTTGACCAGAACAGGGGTGGCAGGCGCACCAACCCTTTCGGTGAGACGGAGGATGGCTCATTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | TCAGGGAATGAGCCATCCTCCGTCTCACCGAAAGGGTaGGTGCGCCTGCCACCCCTGTTCTGGTCAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SGNEPSSVSPKG*VRLPPLFWSRN Trigger: ATTCCTTGACCAGAACAGGGGTGGCAGGCGCACCAACCCTTTCGGTGAGACGGAGGATGGCTCATTCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 72 bp | TTGGCGTCACCGCCTGAAGAGCCGTCTGATTCAACTTaGTGGCTACTGCCTCTGGGTTGTCCGTCAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LASPPEEPSDST*WLLPLGCPSGR Trigger: TCTACCTGACGGACAACCCAGAGGCAGTAGCCATCAAGTTGAATCAGACGGCTCTTCAGGCGGTGACGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 72 bp | CATCTGCTGCAGAAGAGAGTCTTCTGCTTCAGGGAATaGGCCATCCTCCGTCTCACCGAAAGGGTTGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: HLLQKRVFCFRE*AILRLTERVGA Trigger: CGCACCAACCCTTTCGGTGAGACGGAGGATGGCTCATTCCCTGAAGCAGAAGACTCTCTTCTGCAGCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | CCTTCCTGCTCTCTGCTTGGAGAATTATTCCCGGTTTaGCACTGGGCGTGGAGATCTGGAAGCAGTATCGTC | + |
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Preference number: 6 (lower is better) Translates to: PSCSLLGELFPV*HWAWRSGSSIV Trigger: GACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | AGAATTATTCCCGGTTTGCCACTGGGCGTGGAGATCTaGAAGCAGTATCGTCGGTCTTCACAATCCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: RIIPGLPLGVEI*KQYRRSSQSTA Trigger: GGCCGTGGATTGTGAAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 72 bp | GCTGCATGGCCTGCAGCAGCTGGTTGGTGTAATCTGTaGGGGTGCCAGCATCTTCTTCAAATACACTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AAWPAAAGWCNL*GCQHLLQIHSA Trigger: TGCTGAGTGTATTTGAAGAAGATGCTGGCACCCTCACAGATTACACCAACCAGCTGCTGCAGGCCATGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 ENSMUST00000150685.8 ENSMUST00000176294.2 |
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| CDS GCA 72 bp | GCGCCTGCCACCCCTGTTCTGGTCAAGGAATTCTGTTaGCGGAAGTACAATATCAAACTGAATGGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: APATPVLVKEFC*RKYNIKLNGCP Trigger: GGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | TTTCATATGCCAGCAGCTGCCTGGAAAGCTGCTGAGTaGCCAGGCACATTTCATTCTGTGCGCCATAGACAC | + |
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Preference number: 6 (lower is better) Translates to: FHMPAAAWKAAE*PGTFHSVRHRH Trigger: GTGTCTATGGCGCACAGAATGAAATGTGCCTGGCCACTCAGCAGCTTTCCAGGCAGCTGCTGGCATATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 ENSMUST00000150685.8 |
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| CDS CCA 72 bp | TGCTCTCTGCTTGGAGAATTATTCCCGGTTTGCCACTaGGCGTGGAGATCTGGAAGCAGTATCGTCGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CSLLGELFPVCH*AWRSGSSIVGL Trigger: AAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | TCACCGAAAGGGTTGGTGCGCCTGCCACCCCTGTTCTaGTCAAGGAATTCTGTTGCCGGAAGTACAATATCA | + |
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Preference number: 6 (lower is better) Translates to: SPKGLVRLPPLF*SRNSVAGSTIS Trigger: TGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGGCGCACCAACCCTTTCGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | CGGAGTGTAAACAGATTCACTGACCGAAAGCAACTCTaGCTGGGACACCCGCATCTTGTCTGCCTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSVNRFTDRKQL*LGHPHLVCLSF Trigger: GAAGCTGAGGCAGACAAGATGCGGGTGTCCCAGCAAGAGTTGCTTTCGGTCAGTGAATCTGTTTACACTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | TCCTTCCTGCTCTCTGCTTGGAGAATTATTCCCGGTTaGCCACTGGGCGTGGAGATCTGGAAGCAGTATCGT | + |
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Preference number: 6 (lower is better) Translates to: SFLLSAWRIIPG*PLGVEIWKQYR Trigger: ACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 90 bp | AAGGGTTGGTGCGCCTGCCACCCCTGTTCTGGTCAAGGAATTCTGTaGCCGGAAGTACAATATCAAACTGAATGGGTGTCCCAGGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: KGWCACHPCSGQGIL*PEVQYQTEWVSQVQ Trigger: TTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGGCGCACCAACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 90 bp | ATCAATGTCCGGAGTGTAAACAGATTCACTGACCGAAAGCAACTCTaGCTGGGACACCCGCATCTTGTCTGCCTCAGCTTCCAGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: INVRSVNRFTDRKQL*LGHPHLVCLSFQFH Trigger: GTGGAACTGGAAGCTGAGGCAGACAAGATGCGGGTGTCCCAGCAAGAGTTGCTTTCGGTCAGTGAATCTGTTTACACTCCGGACATTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 72 bp | TGGCCACATCAATGTCCGGAGTGTAAACAGATTCACTaGCCGAAAGCAACTCTTGCTGGGACACCCGCATCT | + |
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Preference number: 6 (lower is better) Translates to: WPHQCPECKQIH*PKATLAGTPAS Trigger: AGATGCGGGTGTCCCAGCAAGAGTTGCTTTCGGTCAGTGAATCTGTTTACACTCCGGACATTGATGTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | CTGCTTGGAGAATTATTCCCGGTTTGCCACTGGGCGTaGAGATCTGGAAGCAGTATCGTCGGTCTTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LLGELFPVCHWA*RSGSSIVGLHN Trigger: ATTGTGAAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | TGCGCCTGCCACCCCTGTTCTGGTCAAGGAATTCTGTaGCCGGAAGTACAATATCAAACTGAATGGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: CACHPCSGQGIL*PEVQYQTEWVS Trigger: GGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGGCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 90 bp | CTTCTCTCGAAACTGTATAACAGGGAGAACCATAGTGTCTGCCAGTaGCTTGGCCAGCTCTGTGTGGAGACCATTGAGCTCATCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: LLSKLYNRENHSVCQ*LGQLCVETIELIHH Trigger: GTGATGGATGAGCTCAATGGTCTCCACACAGAGCTGGCCAAGCAACTGGCAGACACTATGGTTCTCCCTGTTATACAGTTTCGAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020500.14 ENSMUST00000146876.9 |
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| CDS CAA 90 bp | TCTTCATATTCCTTCCTGCTCTCTGCTTGGAGAATTATTCCCGGTTaGCCACTGGGCGTGGAGATCTGGAAGCAGTATCGTCGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSYSFLLSAWRIIPG*PLGVEIWKQYRRSS Trigger: TGAAGACCGACGATACTGCTTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | GAGTCTGCCACCCCTGTTCTGGTCAAGGAATTCTGTTaGCGGAAGTACAATATCAAACTGAATGGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ESATPVLVKEFC*RKYNIKLNGCP Trigger: GGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| CDS CCA 72 bp | CATATCCACTCTTCATATTCCTTCCTGCTCTCTGCTTaGAGAATTATTCCCGGTTTGCCACTGGGCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HIHSSYSFLLSA*RIIPGLPLGVE Trigger: CTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAGAGTGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | GCCATTGATCCCAAAAACCGAACGATGAACATCTGCTaGAGAAGAGAGTCTTCTGCTTCAGGGAATGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AIDPKNRTMNIC*RRESSASGNEP Trigger: TGGCTCATTCCCTGAAGCAGAAGACTCTCTTCTGCAGCAGATGTTCATCGTTCGGTTTTTGGGATCAATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | CTACTGCCTCTGGGTTGTCCGTCAGGTAGATCTGCCTaGAGATGTTGTTTACTGCACATATCCACTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LLPLGCPSGRSA*RCCLLHISTLH Trigger: ATGAAGAGTGGATATGTGCAGTAAACAACATCTCCAGGCAGATCTACCTGACGGACAACCCAGAGGCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CCA 72 bp | ACATCTGCTGCAGAAGAGAGTCTGCCACCCCTGTTCTaGTCAAGGAATTCTGTTGCCGGAAGTACAATATCA | + |
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Preference number: 6 (lower is better) Translates to: TSAAEESLPPLF*SRNSVAGSTIS Trigger: TGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGACTCTCTTCTGCAGCAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| CDS CAA 72 bp | AGAGTCTGCCACCCCTGTTCTGGTCAAGGAATTCTGTaGCCGGAAGTACAATATCAAACTGAATGGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RVCHPCSGQGIL*PEVQYQTEWVS Trigger: GGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGACCAGAACAGGGGTGGCAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176675.8 |
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| CDS CAA 90 bp | GTTTACTGCACATATCCACTCTTCATATTCCTTCCTGCTCTCTGCTaGGAGAATTATTCCCGGTTTGCCACTGGGCGTGGAGATCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VYCTYPLFIFLPALC*ENYSRFATGRGDLE Trigger: TTCCAGATCTCCACGCCCAGTGGCAAACCGGGAATAATTCTCCAAGCAGAGAGCAGGAAGGAATATGAAGAGTGGATATGTGCAGTAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 90 bp | TTCGGTCATGCGGAAGATGTTGTGAATAGCTCGAGCAGCCAGTACTaGTCTCATTGCCTCATAAATCACTTCAGCCGTGCTGTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FGHAEDVVNSSSSQY*SHCLINHFSRAVCL Trigger: AAGACAGACAGCACGGCTGAAGTGATTTATGAGGCAATGAGACAAGTACTGGCTGCTCGAGCTATTCACAACATCTTCCGCATGACCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 72 bp | AATCACTTCAGCCGTGCTGTCTGTCTTAACTGCCATTaGTCCCAAAAACCGAACGATGAACATCTGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: NHFSRAVCLNCH*SQKPNDEHLLQ Trigger: CTGCAGCAGATGTTCATCGTTCGGTTTTTGGGATCAATGGCAGTTAAGACAGACAGCACGGCTGAAGTGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | GTCCGTCAGGTAGATCTGCCTGGAGATGTTGTTTACTaGACATATCCACTCTTCATATTCCTTCCTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VRQVDLPGDVVY*TYPLFIFLPAL Trigger: GAGAGCAGGAAGGAATATGAAGAGTGGATATGTGCAGTAAACAACATCTCCAGGCAGATCTACCTGACGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | CGGAAGTACAATATCAAACTGAATGGGTGTCCCAGGTaGAATCAGTTCCTCTGTTTCAGGAATGCTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RKYNIKLNGCPR*NQFLCFRNAGC Trigger: ACAGCCAGCATTCCTGAAACAGAGGAACTGATTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS GCA 72 bp | GTTGTGAATAGCTCGAGCAGCCAGTACTTGTCTCATTaGCTCATAAATCACTTCAGCCGTGCTGTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VVNSSSSQYLSH*LINHFSRAVCL Trigger: AAGACAGACAGCACGGCTGAAGTGATTTATGAGGCAATGAGACAAGTACTGGCTGCTCGAGCTATTCACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS TCA 72 bp | TCAAGGAATTCTGTTGCCGGAAGTACAATATCAAACTaGATGGGTGTCCCAGGTGCAATCAGTTCCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SRNSVAGSTISN*MGVPGAISSSV Trigger: AACAGAGGAACTGATTGCACCTGGGACACCCATTCAGTTTGATATTGTACTTCCGGCAACAGAATTCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | GAGTTTATTATACTTCCAGTATTGCAGAAGGGTCTCTaGGTACCAGCAGTACTGGAGCTCTCATCCATCACT | + |
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Preference number: 6 (lower is better) Translates to: EFIILPVLQKGL*VPAVLELSSIT Trigger: AGTGATGGATGAGAGCTCCAGTACTGCTGGTACCAAGAGACCCTTCTGCAATACTGGAAGTATAATAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150685.8 |
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| CDS CAA 72 bp | GTGCAATCAGTTCCTCTGTTTCAGGAATGCTGGCTGTaGCTTTGGGAACAATATTGTCATCTTCTATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VQSVPLFQECWL*LWEQYCHLLCL Trigger: CAGACATAGAAGATGACAATATTGTTCCCAAAGCAACAGCCAGCATTCCTGAAACAGAGGAACTGATTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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| CDS CAA 72 bp | ATCAGTTCCTCTGTTTCAGGAATGCTGGCTGTTGCTTaGGGAACAATATTGTCATCTTCTATGTCTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: ISSSVSGMLAVA*GTILSSSMSEF Trigger: AAATTCAGACATAGAAGATGACAATATTGTTCCCAAAGCAACAGCCAGCATTCCTGAAACAGAGGAACTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020500.14 |
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