Pregenerated sensors for APPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040760Ensembl transcript IDs: ENSMUST00000036570.5
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCCCAGGAAGCCAGAGACAGGAATGCTGGGCTCACAACCCATGTaGAAAGAGAGGATGGAGAGGCCCGTGAAAGGGATGAAATCCATC | + |
|
Preference number: 1 (lower is better) Translates to: WPRKPETGMLGSQPM*KERMERPVKGMKSI Trigger: GATGGATTTCATCCCTTTCACGGGCCTCTCCATCCTCTCTTTCCACATGGGTTGTGAGCCCAGCATTCCTGTCTCTGGCTTCCTGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 90 bp | TACCAAGTGCCACACAAACACCAACAGACACTTGAGGTCTCCCACTaGCATGATCTAGTACATCAGAGAAATGGAGCAAGCCACAAAACA | + |
|
Preference number: 1 (lower is better) Translates to: YQVPHKHQQTLEVSH*HDLVHQRNGASHKT Trigger: TGTTTTGTGGCTTGCTCCATTTCTCTGATGTACTAGATCATGGCAGTGGGAGACCTCAAGTGTCTGTTGGTGTTTGTGTGGCACTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 90 bp | CATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTaGAAATTCTATTGCACACTCAATATTGTTACAACACTTGCACAC | + |
|
Preference number: 1 (lower is better) Translates to: HPEVNSTTCPVLVIL*KFYCTLNIVTTLAH Trigger: GTGTGCAAGTGTTGTAACAATATTGAGTGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 90 bp | ATGCACTCTCCTCTTCAGAAGATGACTGTAAAGAAACAGCAGAAGTaGAAAATCCCTCCTTGTATTTCCAAGTGGAAGAACTCTAAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: MHSPLQKMTVKKQQK*KIPPCISKWKNSKG Trigger: CCCCTTAGAGTTCTTCCACTTGGAAATACAAGGAGGGATTTTCCACTTCTGCTGTTTCTTTACAGTCATCTTCTGAAGAGGAGAGTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 90 bp | TCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGTGTGTTCACTaGACAAAACCATGCTACCTACAATGTTATGCACATCTTACGATC | + |
|
Preference number: 1 (lower is better) Translates to: SNCEECSSCSYLCVH*TKPCYLQCYAHLTI Trigger: GATCGTAAGATGTGCATAACATTGTAGGTAGCATGGTTTTGTGCAGTGAACACACAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 90 bp | CATCAGAAGGAGTACCATTCAATTCTGGAGCGAAACAGGGTTAACTaGATAGCAGAAATGCAAAAAGACCAAATGGAGCATCCAAGATTC | + |
|
Preference number: 1 (lower is better) Translates to: HQKEYHSILERNRVN*IAEMQKDQMEHPRF Trigger: GAATCTTGGATGCTCCATTTGGTCTTTTTGCATTTCTGCTATCCAGTTAACCCTGTTTCGCTCCAGAATTGAATGGTACTCCTTCTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR TCA 90 bp | CACAAGCCACACCATGATCACAAACCCAATTCTAAAGAGGGATACTaGATGTTTAATTGTACACTGCACAATTGGTTAATATCAGTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: HKPHHDHKPNSKEGY*MFNCTLHNWLISVK Trigger: TTTCACTGATATTAACCAATTGTGCAGTGTACAATTAAACATTCAGTATCCCTCTTTAGAATTGGGTTTGTGATCATGGTGTGGCTTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCTTAGGTGGATGGGGCTaGGAGGGCCATTTCTTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: PPTSTPALQGHLSTQASPLGGWG*EGHFFA Trigger: AGCGAAGAAATGGCCCTCCCAGCCCCATCCACCTAA...GGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR TCA 90 bp | CACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCCAGCTTATCTCTTCCATaGTCTTCAGCATGGATACGC | + |
|
Preference number: 2 (lower is better) Translates to: HLLAPQPCRVISAPRPLPSLSLP*SSAWIR Trigger: GCGTATCCATGCTGAAGATCATGGAAGAGATAAGCT...GGGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR TCA 90 bp | GATCCCTCAGGGGAGAGGGCAGAAGATGCCTGGGATCCAGCCCACACTACAGAGCATTTAGGAAGAAGCTaGCAGGAGCCTTCTTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DPSGERAEDAWDPAHTTEHLGRS*QEPSSS Trigger: GCTTGAAGAAGGCTCCTGTCAGCTTCTTCCTAAATG...CTCTGTAGTGTGGGCTGGATCCCAGGCATCTTCTGCCCTCTCCCCTGAGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR GCA 90 bp | CACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCCGCTGATGTGCAGAATTaGATACAGTTTAATAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: HLLAPQPCRVISAPRPLPADVQN*IQFNSD Trigger: ATCACTATTAAACTGTATGCAATTCTGCACATCAGC...GGGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR GCA 90 bp | GATCCCTCAGGGGAGAGGGCAGAAGATGCCTGGGATCCAGCCCACACTACAGAGGACAGCCAATTACAGTaGAAGATAAAATGTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: DPSGERAEDAWDPAHTTEDSQLQ*KIKCSQ Trigger: TTGTGAACATTTTATCTTGCACTGTAATTGGCTGTC...CTCTGTAGTGTGGGCTGGATCCCAGGCATCTTCTGCCCTCTCCCCTGAGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGAAGGTCTACTTGCCTTaGCTCAGTGACCGTGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SASTVSSNCEECSSCSYLKVYLP*LSDRDR Trigger: CCTGTCACGGTCACTGAGCCAAGGCAAGTAGACCTT...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CCA 90 bp | GCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGTGTGTTCATGAAACTGAAAACCTaGGGTGGGGGTGTGGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ALSVQTVKSAAPVVTCVFMKLKT*GGGVAL Trigger: CAGAGCCACACCCCCACCCCAGGTTTTCAGTTTCAT...GAACACACAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGATGCGTCCTAGGCACTaGAACACATTTTGGTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SASTVSSNCEECSSCSYLMRPRH*NTFWSD Trigger: GTCAGACCAAAATGTGTTCCAGTGCCTAGGACGCAT...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR TCA 90 bp | GCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGTGTGTTCGGTCTCCCACTGCCATaGTCTAGTACATCAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ALSVQTVKSAAPVVTCVFGLPLP*SSTSEK Trigger: TTTCTCTGATGTACTAGATCATGGCAGTGGGAGACC...GAACACACAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CAA 90 bp | AAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGTGATTTaGTGCAAATTCTATTGCACACTCAATATTGTTACAACACTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KHPEVNSTTCPVLVI*CKFYCTLNIVTTLA Trigger: TGCAAGTGTTGTAACAATATTGAGTGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR TCA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTCTTCAAGCAGAGAGCTaGCTACAGCTGATGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LEANISFHSCVRRLCFKGLQAES*LQLMCR Trigger: TCTGCACATCAGCTGTAGTCAGCTCTCTGCTTGAAG...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CAA 90 bp | AATCCAACGACATATTTCTCGAAGCCTTGTCTGCAAATACCTATTTaGACAAATGAGAAAGTAAGTCCTCTGCTCCACAAGCCACACCAT | + |
|
Preference number: 2 (lower is better) Translates to: NPTTYFSKPCLQIPI*TNEKVSPLLHKPHH Trigger: ATGGTGTGGCTTGTGGAGCAGAGGACTTACTTTCTCATTTGTCAAAATAGGTATTTGCAGACAAGGCTTCGAGAAATATGTCGTTGGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR TCA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTCACATCCCAGGGAAATaGGAACTCAAAAAGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LEANISFHSCVRRLCFKGHIPGK*ELKKQQ Trigger: TTGCTGCTTTTTGAGTTCTCATTTCCCTGGGATGTG...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCCAAAATGTGGGATTATaGAAATACTGGGGTTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPQNVGL*KYWGYQ Trigger: CTGATAACCCCAGTATTTTCATAATCCCACATTTTG...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCATAAATCATTCCTTATaGAGACAGCCAATTACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPINHSL*RQPITV Trigger: CACTGTAATTGGCTGTCTCCATAAGGAATGATTTAT...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTCAACACTGTGGAGCTTaGAACACTTTTGAAATTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LEANISFHSCVRRLCFKGQHCGA*NTFEIE Trigger: TTCAATTTCAAAAGTGTTCCAAGCTCCACAGTGTTG...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | AAGGAAGGAGGCAGCCACCTACTAGCACCCCAGCCCTaGAGGGTCATCTCAGCACCCAGGCCTCTCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: KEGGSHLLAPQP*RVISAPRPLPV Trigger: CACGGGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTGGCTGCCTCCTTCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | GCCCGCAGGACTAAGACTGAAGAGGCAAGGTCTACTTaGCTTGGCTCAGTGACCGTGACAGGAATGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARRTKTEEARST*LGSVTVTGMNP Trigger: TGGGTTCATTCCTGTCACGGTCACTGAGCCAAGGCAAGTAGACCTTGCCTCTTCAGTCTTAGTCCTGCGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 72 bp | GCTGTAGCAGCAGCTGCTGGTTTTGTTTTAGGTGGATaGGGCTGGGAGGGCCATTTCTTCGCTCTGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AVAAAAGFVLGG*GWEGHFFALLQ Trigger: CTGAAGCAGAGCGAAGAAATGGCCCTCCCAGCCCCATCCACCTAAAACAAAACCAGCAGCTGCTGCTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 72 bp | AAGCCAGAGACAGGAATGCTGGGCTCACAACCCATGTaGAAAGAGAGGATGGAGAGGCCCGTGAAAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: KPETGMLGSQPM*KERMERPVKGM Trigger: CATCCCTTTCACGGGCCTCTCCATCCTCTCTTTCCACATGGGTTGTGAGCCCAGCATTCCTGTCTCTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 72 bp | GAGACATGTAGCCAGGCAGTGGCCCTCACTCATGCTTaGTGTCCATCTCATTTCCTGATCAAAGCCACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ETCSQAVALTHA*CPSHFLIKATL Trigger: TAAAGTGGCTTTGATCAGGAAATGAGATGGACACCAAGCATGAGTGAGGGCCACTGCCTGGCTACATGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | CCACACAAACACCAACAGACACTTGAGGTCTCCCACTaGCATGATCTAGTACATCAGAGAAATGGAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PHKHQQTLEVSH*HDLVHQRNGAS Trigger: GCTTGCTCCATTTCTCTGATGTACTAGATCATGGCAGTGGGAGACCTCAAGTGTCTGTTGGTGTTTGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | CAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTaGCCCGTCCTTGTGATTTTGTGCAAATTCTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: QATKHPEVNSTT*PVLVILCKFYC Trigger: GCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCAAACACCAACAGACACTaGAGGTCTCCCACTGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SEVLLSNLSCSAAISKVPNTNRH*RSPTAM Trigger: CATGGCAGTGGGAGACCTCAAGTGTCTGTTGGTGTT...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR TCA 72 bp | GAAGAAGCTGACAGGAGCCTTCTTCAAGCAGAGAGCTaGCTACAGCTGATGTGCAGAATTGCATACAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: EEADRSLLQAES*LQLMCRIAYSL Trigger: TAAACTGTATGCAATTCTGCACATCAGCTGTAGTCAGCTCTCTGCTTGAAGAAGGCTCCTGTCAGCTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTCCAAATATCACTATTTaGTTACCATGCAAAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: KGLPALSVQTVKSAAPVVPNITI*LPCKAP Trigger: TGGTGCTTTGCATGGTAACAAAATAGTGATATTTGG...AACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGACCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR TCA 72 bp | ATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGTaGTTTTGTGCAAATTCTATTGCACACTCAATATTG | + |
|
Preference number: 3 (lower is better) Translates to: ILKSTAPPAPSL*FCANSIAHSIL Trigger: CAATATTGAGTGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR TCA 72 bp | CACCCTCAGTACACGCTAACTCTGTCCTGCACTATATaGGGTGTTCAGTTCCTTTTCAGTCTTTCATGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HPQYTLTLSCTI*GVQFLFSLSWN Trigger: ATTCCATGAAAGACTGAAAAGGAACTGAACACCTCATATAGTGCAGGACAGAGTTAGCGTGTACTGAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | GAAGAGTGCAGCTCCTGTAGTTACTTGTGTGTTCACTaGACAAAACCATGCTACCTACAATGTTATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: EECSSCSYLCVH*TKPCYLQCYAH Trigger: ATGTGCATAACATTGTAGGTAGCATGGTTTTGTGCAGTGAACACACAAGTAACTACAGGAGCTGCACTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | GCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTaGTTTAAGGGTCTGCCAGCACTGTCAGTTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: ANISFHSCVRRL*FKGLPALSVQT Trigger: AGTTTGAACTGACAGTGCTGGCAGACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCACTCATGCTTGGTGTCCATCTCATTTCCTGATCAAAGCCACTTTAATGAGACCCGTCCTTGTGATTTaGTGCAAATTCTATTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LTHAWCPSHFLIKATLMRPVLVI*CKFYCT Trigger: TGTGCAATAGAATTTGCACAAAATCACAAGGACGGG...TCTCATTAAAGTGGCTTTGATCAGGAAATGAGATGGACACCAAGCATGAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 72 bp | GAGTACCATTCAATTCTGGAGCGAAACAGGGTTAACTaGATAGCAGAAATGCAAAAAGACCAAATGGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: EYHSILERNRVN*IAEMQKDQMEH Trigger: ATGCTCCATTTGGTCTTTTTGCATTTCTGCTATCCAGTTAACCCTGTTTCGCTCCAGAATTGAATGGTACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR GCA 72 bp | TCCTGTAGTTACTTGTGTGTTCACTGCACAAAACCATaGTACCTACAATGTTATGCACATCTTACGATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCSYLCVHCTKP*YLQCYAHLTIL Trigger: AAGGATCGTAAGATGTGCATAACATTGTAGGTAGCATGGTTTTGTGCAGTGAACACACAAGTAACTACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CCA 72 bp | ATAACGGCAACATCCTCATCCCAACACTGTGGAGCTTaGAACACTTTTGAAATTGAACACCAATCAATCATT | + |
|
Preference number: 3 (lower is better) Translates to: ITATSSSQHCGA*NTFEIEHQSII Trigger: AATGATTGATTGGTGTTCAATTTCAAAAGTGTTCCAAGCTCCACAGTGTTGGGATGAGGATGTTGCCGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTATTGCACACTCAATATaGTTACAACACTTGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: LEANISFHSCVRRLCFKGIAHSI*LQHLHT Trigger: AGTGTGCAAGTGTTGTAACAATATTGAGTGTGCAAT...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTGAGCTTGGAACACTTTaGAAATTGAACACCAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LEANISFHSCVRRLCFKGELGTL*KLNTNQ Trigger: TTGATTGGTGTTCAATTTCAAAAGTGTTCCAAGCTC...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | CACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCCCTCACTTCTTCCGCCTaGTGTCCGGAGAACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLAPQPCRVISAPRPLPLTSSA*CPENKS Trigger: GGATTTGTTCTCCGGACATCAGGCGGAAGAAGTGAG...GGGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | CCACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCGCTTCTAGAGCAGACTaGTTCACTCGTGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPTSTPALQGHLSTQASPASRAD*FTRAAV Trigger: AACTGCTGCACGAGTGAATCAGTCTGCTCTAGAAGC...GGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | CACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCCATCTGGATGGTCATCTaGCTTTACCTCCATAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: HLLAPQPCRVISAPRPLPIWMVI*LYLHRT Trigger: GGTTCTATGGAGGTAAAGTCAGATGACCATCCAGAT...GGGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | CCACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCAAGTCTTCTATTGTCTaGTGCATGGTCTCTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: PPTSTPALQGHLSTQASPKSSIV*CMVSTS Trigger: TGATGTAGAGACCATGCAGCAGACAATAGAAGACTT...GGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | GATCCCTCAGGGGAGAGGGCAGAAGATGCCTGGGATCCAGCCCACACTACAGAGATACGAAAGATGTTGTaGATGGCCCGAGCAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSGERAEDAWDPAHTTEIRKML*MARAAK Trigger: CTTAGCTGCTCGGGCCATCCACAACATCTTTCGTAT...CTCTGTAGTGTGGGCTGGATCCCAGGCATCTTCTGCCCTCTCCCCTGAGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | GATCCCTCAGGGGAGAGGGCAGAAGATGCCTGGGATCCAGCCCACACTACAGAGAGTCAGGTGTGTTGCTaGACTCAATTCATTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSGERAEDAWDPAHTTESQVCC*TQFILC Trigger: GCACAGAATGAATTGAGTGCAGCAACACACCTGACT...CTCTGTAGTGTGGGCTGGATCCCAGGCATCTTCTGCCCTCTCCCCTGAGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TGGAGCAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGAAGATGGGGAAGGAGTaGCAGCTTCTAGAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: WSKPQNILKSTAPPAPSLKMGKE*QLLEQT Trigger: AGTCTGCTCTAGAAGCTGTCACTCCTTCCCCATCTT...CAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | TGGAGCAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGTTGACCAAAGGCTTTTaGCTGGCCAGGCTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WSKPQNILKSTAPPAPSLLTKGF*LARLIF Trigger: GAAGATCAGCCTGGCCAGGCAAAAGCCTTTGGTCAA...CAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TGGAGCAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGAGTTGTCTATGTCCATaGCTAGGCCTCCTGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WSKPQNILKSTAPPAPSLSCLCP*LGLLPH Trigger: ATGTGGCAGGAGGCCTAGCCATGGACATAGACAACT...CAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGGCTGGTTCGAGCTGTTaGTGGCCGAGATTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SASTVSSNCEECSSCSYLAGSSC*WPRLSS Trigger: GGAGGACAATCTCGGCCACCAACAGCTCGAACCAGC...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | TGGAGCAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGTCTTCTATTGTCTGCTaGATGGTCTCTACATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WSKPQNILKSTAPPAPSLSSIVC*MVSTSP Trigger: TGGTGATGTAGAGACCATGCAGCAGACAATAGAAGA...CAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CAA 72 bp | AAGTTCAGTATGGACAGTAGTCTCTCCTTGCTGCCTTaGACTTGGGAGACAGAGGCAAGCGGGTATGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KFSMDSSLSLLP*TWETEASGYVI Trigger: GATCACATACCCGCTTGCCTCTGTCTCCCAAGTCAAAGGCAGCAAGGAGAGACTACTGTCCATACTGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | GCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGTGTGTTCAGTAAAGACCTTGTCTaGGGACTGTCCTCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSVQTVKSAAPVVTCVFSKDLV*GLSSRV Trigger: GACCCTGGAGGACAGTCCGCAGACAAGGTCTTTACT...GAACACACAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTTCCAGATTCTCCAAATaGATTTGTACGCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLPALSVQTVKSAAPVVSRFSK*ICTPAS Trigger: GGAGGCAGGCGTACAAATCCATTTGGAGAATCTGGA...AACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGGTCCACAGCCATCACTaGACAGTTGTCTATGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASTVSSNCEECSSCSYLVHSHH*TVVYVH Trigger: ATGGACATAGACAACTGTTCAGTGATGGCTGTGGAC...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | ACCACAGCAGTTCACAGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTGTACGCCTGCCTCCTTaGCCAAAGGCTTTTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTAVHSFNRGNTTYYEGIVRLPP*PKAFAW Trigger: CCAGGCAAAAGCCTTTGGTCAAGGAGGCAGGCGTAC...AATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACTGTGAACTGCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCCCTCACTACCAATAAAACATTCCTAATGAAAGGGAGAGTATACACAGGAATGCCAGGGTCTCTTCAATaGGCAGCTTGTCGATCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNKTFLMKGRVYTGMPGSLQ*AACRSP Trigger: CGGGGATCGACAAGCTGCCCATTGAAGAGACCCTGG...CATTCCTGTGTATACTCTCCCTTTCATTAGGAATGTTTTATTGGTAGTGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCAGTTCACAGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTGGTTCGAGCTGTTGGTaGCCGAGATTGTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTAVHSFNRGNTTYYEGIGSSCW*PRLSSW Trigger: CCAGGAGGACAATCTCGGCCACCAACAGCTCGAACC...AATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACTGTGAACTGCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCAAGGATCCTGAACTGCTaGTTCGAGCTGTTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVLLSNLSCSAAISKVPRILNC*FELLVA Trigger: GGCCACCAACAGCTCGAACCAGCAGTTCAGGATCCT...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGGTGAGCCTTGTAACTTaGGTCTGCGGATCAATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SASTVSSNCEECSSCSYLVSLVT*VCGSIN Trigger: GTTAATTGATCCGCAGACCCAAGTTACAAGGCTCAC...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | AAGGGTCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTTTAAAGAAACTTATCTaGGCCTGCATGTATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLPALSVQTVKSAAPVVLKKLI*ACMYPS Trigger: ACTGGGATACATGCAGGCTCAGATAAGTTTCTTTAA...AACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGGGGTTAAATTTCGATTaGTGGGAAACTTGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SASTVSSNCEECSSCSYLGLNFD*WETWWD Trigger: ATCCCACCAAGTTTCCCATCAATCGAAATTTAACCC...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCACCTGGTTTGGTCTACTaGAGGCAGCTATCAACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEVLLSNLSCSAAISKVPPGLVY*RQLSTD Trigger: GTCGGTTGATAGCTGCCTCCAGTAGACCAAACCAGG...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCAGTTCACAGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTCACTACCAGCCTaGTTTGGTCTACTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTAVHSFNRGNTTYYEGIPSLPA*FGLLEA Trigger: TGCCTCCAGTAGACCAAACCAGGCTGGTAGTGAGGG...AATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACTGTGAACTGCTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | TCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGATGACCTTGGAAAACTaGTGCAAAGTAGAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SASTVSSNCEECSSCSYLMTLEN*CKVELI Trigger: TATGAGCTCTACTTTGCAGCAGTTTTCCAAGGTCAT...CAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCAGGCTCTCGTGTCTCTaGTGGAAAGATGGGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPRLSCL*WKDGEG Trigger: TCCTTCCCCATCTTTCCAGCAGAGACACGAGAGCCT...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTCACTACCAATAAAACATTCCTAATGAAAGGGAGAGTATACACAGGAATGCCAAGGATCCTGAACTaGTGGTTCGAGCTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNKTFLMKGRVYTGMPRILN*WFELLV Trigger: CACCAACAGCTCGAACCAGCAGTTCAGGATCCTTGG...CATTCCTGTGTATACTCTCCCTTTCATTAGGAATGTTTTATTGGTAGTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | GTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTGCAAATTCTATTGCACATCAAGCAGTCACAAGTaGCTAATAAATGTGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNSTTCPVLVILCKFYCTSSSHK*LINVIL Trigger: CAGAATCACATTTATTAGTCACTTGTGACTGCTTGA...TGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | CTCACTCATGCTTGGTGTCCATCTCATTTCCTGATCAAAGCCACTTTAATGAGACAAATCACTCTCCTCTaGTTGGCTACTGCTAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHAWCPSHFLIKATLMRQITLL*LATAKN Trigger: GTTCTTAGCAGTAGCCAATCAGAGGAGAGTGATTTG...TCTCATTAAAGTGGCTTTGATCAGGAAATGAGATGGACACCAAGCATGAGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTTGCAGCAGTTTCCTCTaGATTTTCACTCAAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLPALSVQTVKSAAPVVCSSFL*IFTQIY Trigger: ATATATTTGAGTGAAAATCCAGAGGAAACTGCTGCA...AACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CAA 72 bp | AGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTaGTGTGTTCACTGCACAAAACCATGCTACCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSNCEECSSCSY*CVHCTKPCYLQ Trigger: TTGTAGGTAGCATGGTTTTGTGCAGTGAACACACAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | GCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTACTTGTGTGTTCTATATCAAACTGTATTaGTGTATCCGGAGCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVQTVKSAAPVVTCVFYIKLY*CIRSNK Trigger: CTTGTTGCTCCGGATACACCAATACAGTTTGATATA...GAACACACAAGTAACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCATCACTCTCCTCTGATTaGCTACTGCTAAGAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEVLLSNLSCSAAISKVPSLSSD*LLLRTS Trigger: GCTTGTTCTTAGCAGTAGCCAATCAGAGGAGAGTGA...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTAGTTTCCACCCTGCGTaGAGTAAAACTGTCTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEANISFHSCVRRLCFKGSFHPA*SKTVYP Trigger: GGGATAGACAGTTTTACTTCACGCAGGGTGGAAACT...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCCGAAGTCAGGTGTGTTaGTGCACTCAATTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPRSQVC*CTQFIL Trigger: CAGAATGAATTGAGTGCAGCAACACACCTGACTTCG...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCAGACTGATTCACTCGTaGAGCAGTTTCCTCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPRLIHS*SSFLWI Trigger: AATCCAGAGGAAACTGCTGCACGAGTGAATCAGTCT...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCAGATATAAAGGGTCACTaGCTACCTCCAAGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SEVLLSNLSCSAAISKVPDIKGH*LPPSLL Trigger: TAGAAGACTTGGAGGTAGCCAGTGACCCTTTATATC...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCTCTATCCCAGGTAGATaGCACCAAGCCTGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPSIPGR*HQACFI Trigger: AATAAAACAGGCTTGGTGTCATCTACCTGGGATAGA...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTCCCTTTAGTAAGCCCAGAGTCTTCTGTTTCTaGTTTTGTGCTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFNRGNTTYYEGIPFSKPRVFCF*FCASSR Trigger: TCTGGAGGAAGCACAAAATCAGAAACAGAAGACTCT...GGGCTTACTAAAGGGAATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCATTCTTTTTGTTTTTCTaGTGCCCTACGATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEVLLSNLSCSAAISKVPFFLFF*CPTIQF Trigger: GAACTGGATCGTAGGGCATCAGAAAAACAAAAAGAA...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CCA 90 bp | TCCCTCACTACCAATAAAACATTCCTAATGAAAGGGAGAGTATACACAGGAATGAAATGGGGAACATCATaGCATCAGCAAGTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNKTFLMKGRVYTGMKWGTS*HQQVEL Trigger: CAACTCAACTTGCTGATGCCATGATGTTCCCCATTT...CATTCCTGTGTATACTCTCCCTTTCATTAGGAATGTTTTATTGGTAGTGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCATTCCATCAAAAGAAGTaGTCTGAAAACAGTATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEVLLSNLSCSAAISKVPFHQKK*SENSIV Trigger: GACGATACTGTTTTCAGATCACTTCTTTTGATGGAA...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTCACTACCAATAAAACATTCCTAATGAAAGGGAGAGTATACACAGGAATGCTTGTAACTTGGGTCTaGGGATCAATTAACTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNKTFLMKGRVYTGMLVTWV*GSINFK Trigger: CTTGAAGTTAATTGATCCGCAGACCCAAGTTACAAG...CATTCCTGTGTATACTCTCCCTTTCATTAGGAATGTTTTATTGGTAGTGAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| 3UTR CAA 72 bp | CATCCTCATCCCAACACTGTGGAGCTTGGAACACTTTaGAAATTGAACACCAATCAATCATTAAGTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPHPNTVELGTL*KLNTNQSLSNG Trigger: TCCATTACTTAATGATTGATTGGTGTTCAATTTCAAAAGTGTTCCAAGCTCCACAGTGTTGGGATGAGGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTATCAGCAAGTTGAGTTaGAAGTACTGCATGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEANISFHSCVRRLCFKGISKLS*KYCMTR Trigger: TCTTGTCATGCAGTACTTTCAACTCAACTTGCTGAT...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTTTGCTGAGCTCTTTCTaGTGTTTCTCTTTTACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEANISFHSCVRRLCFKGLLSSF*CFSFTL Trigger: GAGAGTAAAAGAGAAACAGCAGAAAGAGCTCAGCAA...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCAGTTCACAGTTTTAACAGAGGAAACACTACTTACTATGAAGGCATTACTCAATTCATTCTGTaGATCATAAATCCGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTAVHSFNRGNTTYYEGITQFIL*IINPMH Trigger: ATGCATCGGATTTATGATGCACAGAATGAATTGAGT...AATGCCTTCATAGTAAGTAGTGTTTCCTCTGTTAAAACTGTGAACTGCTGTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | CCACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCCACTACCAGCCTGGTTaGGTCTACTGGAGGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PPTSTPALQGHLSTQASPHYQPG*VYWRQL Trigger: TAGCTGCCTCCAGTAGACCAAACCAGGCTGGTAGTG...GGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | CACCTACTAGCACCCCAGCCCTGCAGGGTCATCTCAGCACCCAGGCCTCTCCCCATTCTCCAAATGGATTaGTACGCCTGCCTCCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLLAPQPCRVISAPRPLPILQMD*YACLLD Trigger: GTCAAGGAGGCAGGCGTACAAATCCATTTGGAGAAT...GGGGAGAGGCCTGGGTGCTGAGATGACCCTGCAGGGCTGGGGTGCTAGTAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 90 bp | TTGGCTACTGCTAAGAACAAGCTGGCCCTCACTACCAGCCTGGTTTaGTCTACTGGAGGCAGCTATCAACCGACTCTGTTCTTCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LATAKNKLALTTSLV*STGGSYQPTLFFQV Trigger: GACTTGGAAGAACAGAGTCGGTTGATAGCTGCCTCCAGTAGACCAAACCAGGCTGGTAGTGAGGGCCAGCTTGTTCTTAGCAGTAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 90 bp | TCTGATTGGCTACTGCTAAGAACAAGCTGGCCCTCACTACCAGCCTaGTTTGGTCTACTGGAGGCAGCTATCAACCGACTCTGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDWLLLRTSWPSLPA*FGLLEAAINRLCSS Trigger: GGAAGAACAGAGTCGGTTGATAGCTGCCTCCAGTAGACCAAACCAGGCTGGTAGTGAGGGCCAGCTTGTTCTTAGCAGTAGCCAATCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTGCAAATTCTATTGCACATGCTGGTTCGAGCTGTaGGTGGCCGAGATTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNSTTCPVLVILCKFYCTCWFEL*VAEIVL Trigger: GAGGACAATCTCGGCCACCAACAGCTCGAACCAGCA...TGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTCTTGACCAAAGGCTTTaGCCTGGCCAGGCTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KGLPALSVQTVKSAAPVVLDQRL*PGQADL Trigger: AAGATCAGCCTGGCCAGGCAAAAGCCTTTGGTCAAG...AACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTGCAAATTCTATTGCACATGTACGCCTGCCTCCTaGACCAAAGGCTTTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VNSTTCPVLVILCKFYCTCTPAS*TKGFCL Trigger: CAGGCAAAAGCCTTTGGTCAAGGAGGCAGGCGTACA...TGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 90 bp | TGGGAAACTTGGTGGGATCCGGGTCAGGCAGATATAAAGGGTCACTaGCTACCTCCAAGTCTTCTATTGTCTGCTGCATGGTCTCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: WETWWDPGQADIKGH*LPPSLLLSAAWSLH Trigger: ATGTAGAGACCATGCAGCAGACAATAGAAGACTTGGAGGTAGCCAGTGACCCTTTATATCTGCCTGACCCGGATCCCACCAAGTTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | TGGAGCAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGAGCTCATCTATGACCTaGGAAAACTGCTGCAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WSKPQNILKSTAPPAPSLSSSMT*ENCCKV Trigger: TACTTTGCAGCAGTTTTCCAAGGTCATAGATGAGCT...CAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | TGGAGCAAGCCACAAAACATCCTGAAGTCAACAGCACCACCTGCCCCGTCCTTGCTAAGATCTGGCGCATaGTTTCATAGACAACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSKPQNILKSTAPPAPSLLRSGA*FHRQHL Trigger: CAGATGTTGTCTATGAAACAATGCGCCAGATCTTAG...CAAGGACGGGGCAGGTGGTGCTGTTGACTTCAGGATGTTTTGTGGCTTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCTGCCAGCACTGTCAGTTCAAACTGTGAAGAGTGCAGCTCCTGTAGTTTCGAAGTCAGGTGTGTaGCTGCACTCAATTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLPALSVQTVKSAAPVVSKSGV*LHSIHS Trigger: AGAATGAATTGAGTGCAGCAACACACCTGACTTCGA...AACTACAGGAGCTGCACTCTTCACAGTTTGAACTGACAGTGCTGGCAGACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS GCA 90 bp | GGCAGATATAAAGGGTCACTGGCTACCTCCAAGTCTTCTATTGTCTaGTGCATGGTCTCTACATCACCATCCATTTCTCTTCGAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: GRYKGSLATSKSSIV*CMVSTSPSISLRTF Trigger: GAATGTTCGAAGAGAAATGGATGGTGATGTAGAGACCATGCAGCAGACAATAGAAGACTTGGAGGTAGCCAGTGACCCTTTATATCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTCTTACTCTCTAACCTTTCCTGTTCTGCAGCAATAAGTAAAGTCCCACACCAAGTAAAGACCTaGTCTGCGGACTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEVLLSNLSCSAAISKVPHQVKT*SADCPP Trigger: TGGAGGACAGTCCGCAGACAAGGTCTTTACTTGGTG...TGGGACTTTACTTATTGCTGCAGAACAGGAAAGGTTAGAGAGTAAGACTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTGCAAATTCTATTGCACATCTTCCAGTTGTCCATaGAGATTTTCAGAACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VNSTTCPVLVILCKFYCTSSSCP*RFSEPI Trigger: GATGGGTTCTGAAAATCTCAATGGACAACTGGAAGA...TGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTGCAAATTCTATTGCACACTTCTGTTTCTGATTTaGTGCTTCCTCCAGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNSTTCPVLVILCKFYCTLLFLI*CFLQIL Trigger: GAGAATCTGGAGGAAGCACAAAATCAGAAACAGAAG...TGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | GTCAACAGCACCACCTGCCCCGTCCTTGTGATTTTGTGCAAATTCTATTGCACATTATATCAAACTGTATaGGTGTATCCGGAGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: VNSTTCPVLVILCKFYCTLYQTV*VYPEQQ Trigger: TTGTTGCTCCGGATACACCAATACAGTTTGATATAA...TGTGCAATAGAATTTGCACAAAATCACAAGGACGGGGCAGGTGGTGCTGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS TCA 90 bp | TTTAAACTGGGAAATGGGGAACATCATGGCATCAGCAAGTTGAGTTaGAAGTACTGCATGACAAGAACTAAGCTCATCTATGACCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FKLGNGEHHGISKLS*KYCMTRTKLIYDLG Trigger: TCCAAGGTCATAGATGAGCTTAGTTCTTGTCATGCAGTACTTTCAACTCAACTTGCTGATGCCATGATGTTCCCCATTTCCCAGTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGCAAATATTTCCTTTCATTCGTGTGTCAGAAGACTCTGCTTTAAGGGTCCTCCAAGTCTTCTATaGTCTGCTGCATGGTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LEANISFHSCVRRLCFKGPPSLL*SAAWSL Trigger: TAGAGACCATGCAGCAGACAATAGAAGACTTGGAGG...ACCCTTAAAGCAGAGTCTTCTGACACACGAATGAAAGGAAATATTTGCTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS-3UTR CAA 90 bp | TCCCTCACTACCAATAAAACATTCCTAATGAAAGGGAGAGTATACACAGGAATGCATCAGCAAGTTGAGTaGAAAGTACTGCATGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTTNKTFLMKGRVYTGMHQQVE*KVLHDK Trigger: CTTGTCATGCAGTACTTTCAACTCAACTTGCTGATG...CATTCCTGTGTATACTCTCCCTTTCATTAGGAATGTTTTATTGGTAGTGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS TCA 90 bp | ACCGACTCTGTTCTTCCAAGTCCTTCTCAATCTGTTTCTGTTTGCTaGGCTCTTTCTGCTGTTTCTCTTTTACTCTCTCTATTTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDSVLPSPSQSVSVC*ALSAVSLLLSLFLF Trigger: AAAAAGAAATAGAGAGAGTAAAAGAGAAACAGCAGAAAGAGCTCAGCAAACAGAAACAGATTGAGAAGGACTTGGAAGAACAGAGTCGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 72 bp | CTGATCCCAAGGATCCTGAACTGCTGGTTCGAGCTGTaGGTGGCCGAGATTGTCCTCCTGGACGCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LIPRILNCWFEL*VAEIVLLDAGS Trigger: AGAGCCTGCGTCCAGGAGGACAATCTCGGCCACCAACAGCTCGAACCAGCAGTTCAGGATCCTTGGGATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS GCA 72 bp | CGAGATTGTCCTCCTGGACGCAGGCTCTCGTGTCTCTaGTGGAAAGATGGGGAAGGAGTGACAGCTTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDCPPGRRLSCL*WKDGEGVTASR Trigger: TCTAGAAGCTGTCACTCCTTCCCCATCTTTCCAGCAGAGACACGAGAGCCTGCGTCCAGGAGGACAATCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 72 bp | CAAGCTGGCCCTCACTACCAGCCTGGTTTGGTCTACTaGAGGCAGCTATCAACCGACTCTGTTCTTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QAGPHYQPGLVY*RQLSTDSVLPS Trigger: ACTTGGAAGAACAGAGTCGGTTGATAGCTGCCTCCAGTAGACCAAACCAGGCTGGTAGTGAGGGCCAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 72 bp | CTACTGCTAAGAACAAGCTGGCCCTCACTACCAGCCTaGTTTGGTCTACTGGAGGCAGCTATCAACCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLRTSWPSLPA*FGLLEAAINRL Trigger: GAGTCGGTTGATAGCTGCCTCCAGTAGACCAAACCAGGCTGGTAGTGAGGGCCAGCTTGTTCTTAGCAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 72 bp | TGGTGGGATCCGGGTCAGGCAGATATAAAGGGTCACTaGCTACCTCCAAGTCTTCTATTGTCTGCTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: WWDPGQADIKGH*LPPSLLLSAAW Trigger: CCATGCAGCAGACAATAGAAGACTTGGAGGTAGCCAGTGACCCTTTATATCTGCCTGACCCGGATCCCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CCA 72 bp | TCACTCTCCTCTGATTGGCTACTGCTAAGAACAAGCTaGCCCTCACTACCAGCCTGGTTTGGTCTACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSDWLLLRTS*PSLPAWFGLLE Trigger: CTCCAGTAGACCAAACCAGGCTGGTAGTGAGGGCCAGCTTGTTCTTAGCAGTAGCCAATCAGAGGAGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 72 bp | ATGGATTTGTACGCCTGCCTCCTTGACCAAAGGCTTTaGCCTGGCCAGGCTGATCTTCACACACAGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MDLYACLLDQRL*PGQADLHTQEK Trigger: TTTCTCCTGTGTGTGAAGATCAGCCTGGCCAGGCAAAAGCCTTTGGTCAAGGAGGCAGGCGTACAAATCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 72 bp | CCAGCCTTTCGGGTTAAATTTCGATTGATGGGAAACTaGGTGGGATCCGGGTCAGGCAGATATAAAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAFRVKFRLMGN*VGSGSGRYKGS Trigger: TGACCCTTTATATCTGCCTGACCCGGATCCCACCAAGTTTCCCATCAATCGAAATTTAACCCGAAAGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 72 bp | TGTTGTGGATGGCCCGAGCAGCTAAGATCTGGCGCATaGTTTCATAGACAACATCTGGATGGTCATCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: CCGWPEQLRSGA*FHRQHLDGHLT Trigger: AGTCAGATGACCATCCAGATGTTGTCTATGAAACAATGCGCCAGATCTTAGCTGCTCGGGCCATCCACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 90 bp | TTTAGGTATCCAGCCTTTCGGGTTAAATTTCGATTGATGGGAAACTaGGTGGGATCCGGGTCAGGCAGATATAAAGGGTCACTGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: FRYPAFRVKFRLMGN*VGSGSGRYKGSLAT Trigger: GGTAGCCAGTGACCCTTTATATCTGCCTGACCCGGATCCCACCAAGTTTCCCATCAATCGAAATTTAACCCGAAAGGCTGGATACCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 90 bp | GGTCAGGCAGATATAAAGGGTCACTGGCTACCTCCAAGTCTTCTATaGTCTGCTGCATGGTCTCTACATCACCATCCATTTCTCTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GQADIKGHWLPPSLL*SAAWSLHHHPFLFE Trigger: TTCGAAGAGAAATGGATGGTGATGTAGAGACCATGCAGCAGACAATAGAAGACTTGGAGGTAGCCAGTGACCCTTTATATCTGCCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 90 bp | GGCCAGGCTGATCTTCACACACAGGAGAAATTATATCAAACTGTATaGGTGTATCCGGAGCAACAAGAGAATCTAGAGAGAGGGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GQADLHTQEKLYQTV*VYPEQQENLERGQP Trigger: TGGCTGCCCTCTCTCTAGATTCTCTTGTTGCTCCGGATACACCAATACAGTTTGATATAATTTCTCCTGTGTGTGAAGATCAGCCTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS TCA 72 bp | CATTTAGGTATCCAGCCTTTCGGGTTAAATTTCGATTaGTGGGAAACTTGGTGGGATCCGGGTCAGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGIQPFGLNFD*WETWWDPGQAD Trigger: ATCTGCCTGACCCGGATCCCACCAAGTTTCCCATCAATCGAAATTTAACCCGAAAGGCTGGATACCTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS TCA 72 bp | AAAGATGGGGAAGGAGTGACAGCTTCTAGAGCAGACTaGTTCACTCGTGCAGCAGTTTCCTCTGGATTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KDGEGVTASRAD*FTRAAVSSGFS Trigger: TGAAAATCCAGAGGAAACTGCTGCACGAGTGAATCAGTCTGCTCTAGAAGCTGTCACTCCTTCCCCATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS GCA 72 bp | AAAGGGTCACTGGCTACCTCCAAGTCTTCTATTGTCTaGTGCATGGTCTCTACATCACCATCCATTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KGSLATSKSSIV*CMVSTSPSISL Trigger: AAGAGAAATGGATGGTGATGTAGAGACCATGCAGCAGACAATAGAAGACTTGGAGGTAGCCAGTGACCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 72 bp | GATATAAAGGGTCACTGGCTACCTCCAAGTCTTCTATaGTCTGCTGCATGGTCTCTACATCACCATCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: DIKGHWLPPSLL*SAAWSLHHHPF Trigger: AAATGGATGGTGATGTAGAGACCATGCAGCAGACAATAGAAGACTTGGAGGTAGCCAGTGACCCTTTATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS GCA 72 bp | ATATTCTTTCAAAAGTTTCGAAGTCAGGTGTGTTGCTaGACTCAATTCATTCTGTGCATCATAAATCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: IFFQKFRSQVCC*TQFILCIINPM Trigger: CATCGGATTTATGATGCACAGAATGAATTGAGTGCAGCAACACACCTGACTTCGAAACTTTTGAAAGAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS GCA 72 bp | TTCATATTCTTTCAAAAGTTTCGAAGTCAGGTGTGTTaGTGCACTCAATTCATTCTGTGCATCATAAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: FIFFQKFRSQVC*CTQFILCIINP Trigger: CGGATTTATGATGCACAGAATGAATTGAGTGCAGCAACACACCTGACTTCGAAACTTTTGAAAGAATATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||
| CDS CAA 72 bp | GTTCCAATGTTAGCTAAGAATTCTTCCAGTTGTCCATaGAGATTTTCAGAACCCATCTTAAAGAAACTTATC | + |
|
Preference number: 6 (lower is better) Translates to: VPMLAKNSSSCP*RFSEPILKKLI Trigger: GATAAGTTTCTTTAAGATGGGTTCTGAAAATCTCAATGGACAACTGGAAGAATTCTTAGCTAACATTGGAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036570.5 |
||