Pregenerated sensors for APPBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018481Ensembl transcript IDs: ENSMUST00000018625.10
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCTCAGACTTCCAGGCTGGCAGCTGGTGCACTACTGCATTTCTTaGGACAGGGTCTTATCACTAGGCCATCCTGGGGCATCCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LLRLPGWQLVHYCIS*DRVLSLGHPGASQV Trigger: CACTTGGGATGCCCCAGGATGGCCTAGTGATAAGACCCTGTCTCAAGAAATGCAGTAGTGCACCAGCTGCCAGCCTGGAAGTCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR GCA 90 bp | CTCAGTTGGCGCTATTACACCGAACAAGTGACTCCCTGGGTCACATaGATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LSWRYYTEQVTPWVT*MHRLLMPPNGIAPD Trigger: GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCAGGGAGTCACTTGTTCGGTGTAATAGCGCCAACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 90 bp | GCACTACTGCATTTCTTGAGACAGGGTCTTATCACTAGGCCATCCTaGGGCATCCCAAGTGATTCTCCTGTTTCAGCCTCCCATGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: ALLHFLRQGLITRPS*GIPSDSPVSASHGV Trigger: AACTCCATGGGAGGCTGAAACAGGAGAATCACTTGGGATGCCCCAGGATGGCCTAGTGATAAGACCCTGTCTCAAGAAATGCAGTAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR GCA 90 bp | GTGATTCTCCTGTTTCAGCCTCCCATGGAGTTGGGATTGAACTTGTaGCAGCACGTGCAGTTCCCTGTACTGAATGCTCACAAGACATTC | + |
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Preference number: 1 (lower is better) Translates to: VILLFQPPMELGLNL*QHVQFPVLNAHKTF Trigger: GAATGTCTTGTGAGCATTCAGTACAGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAGGAGAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 90 bp | ACTGTCTTTGGAGGGATTAACTATATAGGCTTGTGGGGCTCCAGCTaGGTAACCGGATGCTACTCCTTGGTCACACAGACTATGTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: TVFGGINYIGLWGSS*VTGCYSLVTQTMWK Trigger: TTTCCACATAGTCTGTGTGACCAAGGAGTAGCATCCGGTTACTCAGCTGGAGCCCCACAAGCCTATATAGTTAATCCCTCCAAAGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 90 bp | AGGAACTGCAATACAGGACTACCCGAAATAGGGTCTTGGGTGGACTaGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGG | + |
|
Preference number: 1 (lower is better) Translates to: RNCNTGLPEIGSWVD*TSVSMQMPALKTTW Trigger: CCATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAAGACCCTATTTCGGGTAGTCCTGTATTGCAGTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 90 bp | CAAAAGCTTGCATCGCGTTTTGCCTATAAAGACAATCAAGTTCAATaGCTGCTCAGACTTCCAGGCTGGCAGCTGGTGCACTACTGCATT | + |
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Preference number: 1 (lower is better) Translates to: QKLASRFAYKDNQVQ*LLRLPGWQLVHYCI Trigger: AATGCAGTAGTGCACCAGCTGCCAGCCTGGAAGTCTGAGCAGCCATTGAACTTGATTGTCTTTATAGGCAAAACGCGATGCAAGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 90 bp | ATCCTCAGGGCAAAGCCTAGTTTGAGGACCATAAATGTTGTGCACTaGGCTTTTACTCAGTTGGCGCTATTACACCGAACAAGTGACTCC | + |
|
Preference number: 1 (lower is better) Translates to: ILRAKPSLRTINVVH*AFTQLALLHRTSDS Trigger: GGAGTCACTTGTTCGGTGTAATAGCGCCAACTGAGTAAAAGCTCAGTGCACAACATTTATGGTCCTCAAACTAGGCTTTGCCCTGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 90 bp | TTATTCTACAGGAACTGCAATACAGGACTACCCGAAATAGGGTCTTaGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LFYRNCNTGLPEIGS*VDWTSVSMQMPALK Trigger: TTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAAGACCCTATTTCGGGTAGTCCTGTATTGCAGTTCCTGTAGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR GCA 90 bp | CAGTTTGGTATCTCTGATGTAAATGAAGCTCTTGCATTAGTACTCTaGATTCTACTGGCAAGGCAACTGCAGTCACTAAAGCCACAACTG | + |
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Preference number: 1 (lower is better) Translates to: QFGISDVNEALALVL*ILLARQLQSLKPQL Trigger: CAGTTGTGGCTTTAGTGACTGCAGTTGCCTTGCCAGTAGAATGCAGAGTACTAATGCAAGAGCTTCATTTACATCAGAGATACCAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 90 bp | AAATCATTGATTCTCACAGGCAGCAATACCCGGGCAGGGTGCTGGTaGGATGTTTATAAAAATGAATGTACATGGATGGAGAAAGAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: KSLILTGSNTRAGCW*DVYKNECTWMEKER Trigger: CCTTTCTTTCTCCATCCATGTACATTCATTTTTATAAACATCTCACCAGCACCCTGCCCGGGTATTGCTGCCTGTGAGAATCAATGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 90 bp | TCAGGGCAAAGATTAAAGGGAGTGGCTGCAGAGATGGTTAGACATTaGTGTGCTTATGATATTGCCATCCATGTACCAGGACTAAATATT | + |
|
Preference number: 1 (lower is better) Translates to: SGQRLKGVAAEMVRH*CAYDIAIHVPGLNI Trigger: AATATTTAGTCCTGGTACATGGATGGCAATATCATAAGCACACCAATGTCTAACCATCTCTGCAGCCACTCCCTTTAATCTTTGCCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACAACTGCTGGTCTACGTaGGGTTCTGAGACGGACCGA | + |
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Preference number: 2 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDNCWST*GSETDR Trigger: TCGGTCCGTCTCAGAACCCCACGTAGACCAGCAGTT...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CAA 90 bp | CCTGGGGCATCCCAAGTGATTCTCCTGTTTCAGCCTCCCATGGAGTaGGGATTGAACTTGTGCCAGCACGTGCAGTTCCCTGTACTGAAT | + |
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Preference number: 2 (lower is better) Translates to: PGASQVILLFQPPME*GLNLCQHVQFPVLN Trigger: ATTCAGTACAGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAGGAGAATCACTTGGGATGCCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CAA 90 bp | GCATCCCAAGTGATTCTCCTGTTTCAGCCTCCCATGGAGTTGGGATaGAACTTGTGCCAGCACGTGCAGTTCCCTGTACTGAATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: ASQVILLFQPPMELG*NLCQHVQFPVLNAH Trigger: GTGAGCATTCAGTACAGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAGGAGAATCACTTGGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR TCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTTTTGATTTCACAGTATaGATTCCCCGGAATCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TPPSTAGSSVANSQVRAPFDFTV*IPRNLG Trigger: TCCCAGATTCCGGGGAATTCATACTGTGAAATCAAA...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACGAGTGCGAGTTCAGTTaGACTGAGCTAAGGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDECEFS*TELRKM Trigger: CATCTTCCTTAGCTCAGTTCAACTGAACTCGCACTC...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CAA 90 bp | CAAGTGATTCTCCTGTTTCAGCCTCCCATGGAGTTGGGATTGAACTaGTGCCAGCACGTGCAGTTCCCTGTACTGAATGCTCACAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: QVILLFQPPMELGLN*CQHVQFPVLNAHKT Trigger: TGTCTTGTGAGCATTCAGTACAGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAGGAGAATCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGGAGTGGCTGCAGAGATaGTTAGACATTGGTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NKFEWLCQDDREPASSAGEWLQR*LDIGVL Trigger: AAGCACACCAATGTCTAACCATCTCTGCAGCCACTC...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGAACCAAGCTAAACATTaGGAAGTTAGTCGGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: NKFEWLCQDDREPASSAGNQAKH*EVSRAW Trigger: CCACGCCCGACTAACTTCCCAATGTTTAGCTTGGTT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACCAGTCTCCTGAATACTaGCATTATAGATATGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDQSPEY*HYRYVP Trigger: TGGCACATATCTATAATGTCAGTATTCAGGAGACTG...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR GCA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACTTATTCTACAGGAACTaGAATACAGGACTACCCGAA | + |
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Preference number: 2 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDLFYRN*NTGLPE Trigger: TTCGGGTAGTCCTGTATTGCAGTTCCTGTAGAATAA...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR GCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGCTTGCATTAGTACTCTaGATTCTACTGGCAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: NKFEWLCQDDREPASSAGLALVL*ILLARQ Trigger: TTGCCTTGCCAGTAGAATGCAGAGTACTAATGCAAG...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAAGTTAGTCGGGCGTGGTaGCGCACGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKVSRAW*RTPLIP Trigger: TGGGATTAAAGGCGTGCGCCACCACGCCCGACTAAC...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CAA 90 bp | CTTATTCTACAGGAACTGCAATACAGGACTACCCGAAATAGGGTCTaGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LILQELQYRTTRNRV*GGLDQCFNANASPK Trigger: TTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAAGACCCTATTTCGGGTAGTCCTGTATTGCAGTTCCTGTAGAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTTTCCTGTTGTTCTACTaGGGTGAGAATGTGGGACTA | + |
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Preference number: 2 (lower is better) Translates to: VIKGEGESQLHKLQVCQIFLLFY*GENVGL Trigger: TAGTCCCACATTCTCACCCCAGTAGAACAACAGGAA...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAACCCGAAATAGGGTCTTaGGTGGACTGGACCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKPEIGS*VDWTSV Trigger: AACACTGGTCCAGTCCACCCAAGACCCTATTTCGGG...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR TCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAAACACGCGGCACATGCTaGTATAACTCAATATATGCT | + |
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Preference number: 2 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKTRGTC*YNSIYA Trigger: AGCATATATTGAGTTATATCAGCATGTGCCGCGTGT...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | GCAACTGCAGTCACTAAAGCCACAACTGAAAGCCGCTaGTCCAAGTCACACCGTCCACGGCTGCCTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ATAVTKATTESR*SKSHRPRLPGP Trigger: AGGACCAGGCAGCCGTGGACGGTGTGACTTGGACCAGCGGCTTTCAGTTGTGGCTTTAGTGACTGCAGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | CTCAGTTGGCGCTATTACACCGAACAAGTGACTCCCTaGGTCACATGCATGCACAGGCTCCTCATGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LSWRYYTEQVTP*VTCMHRLLMPP Trigger: TGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCAGGGAGTCACTTGTTCGGTGTAATAGCGCCAACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | CTTCCAGGCTGGCAGCTGGTGCACTACTGCATTTCTTaGGACAGGGTCTTATCACTAGGCCATCCTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LPGWQLVHYCIS*DRVLSLGHPGA Trigger: TGCCCCAGGATGGCCTAGTGATAAGACCCTGTCTCAAGAAATGCAGTAGTGCACCAGCTGCCAGCCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CAA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTCCAATCAGTGAAACATaGCAACTGAAGGAGTCCGAG | + |
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Preference number: 3 (lower is better) Translates to: TPPSTAGSSVANSQVRAPPISET*QLKESE Trigger: CTCGGACTCCTTCAGTTGCAATGTTTCACTGATTGG...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | CGTTGGTCCAGTCAGACGAACCTGACAGTCCGTCACTaGGACAGTTCTGGAATGGCTGAATGCCCTGATTTG | + |
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Preference number: 3 (lower is better) Translates to: RWSSQTNLTVRH*DSSGMAECPDL Trigger: CAAATCAGGGCATTCAGCCATTCCAGAACTGTCTCAGTGACGGACTGTCAGGTTCGTCTGACTGGACCAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR GCA 72 bp | CTGTTTCAGCCTCCCATGGAGTTGGGATTGAACTTGTaGCAGCACGTGCAGTTCCCTGTACTGAATGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LFQPPMELGLNL*QHVQFPVLNAH Trigger: GTGAGCATTCAGTACAGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CAA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACGCTGAATGCCCTGATTaGGAAAAGACGGCCAAATCT | + |
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Preference number: 3 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDAECPD*EKTAKS Trigger: AGATTTGGCCGTCTTTTCCAAATCAGGGCATTCAGC...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | GGAGGGATTAACTATATAGGCTTGTGGGGCTCCAGCTaGGTAACCGGATGCTACTCCTTGGTCACACAGACT | + |
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Preference number: 3 (lower is better) Translates to: GGINYIGLWGSS*VTGCYSLVTQT Trigger: AGTCTGTGTGACCAAGGAGTAGCATCCGGTTACTCAGCTGGAGCCCCACAAGCCTATATAGTTAATCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR GCA 72 bp | TTCAATGGCTGCTCAGACTTCCAGGCTGGCAGCTGGTaGACTACTGCATTTCTTGAGACAGGGTCTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: FNGCSDFQAGSW*TTAFLETGSYH Trigger: GTGATAAGACCCTGTCTCAAGAAATGCAGTAGTGCACCAGCTGCCAGCCTGGAAGTCTGAGCAGCCATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | ACTGAGACAGTTCTGGAATGGCTGAATGCCCTGATTTaGAAAAGACGGCCAAATCTAGGTCAGGGTGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: TETVLEWLNALI*KRRPNLGQGAP Trigger: AGGGGCACCCTGACCTAGATTTGGCCGTCTTTTCCAAATCAGGGCATTCAGCCATTCCAGAACTGTCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | GTTTGGAGACAATCTCCCTTTGTAGCCCAGGCTGCCTaGAACTCAGTCTCTTACCTCACTCAGTCTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: VWRQSPFVAQAA*NSVSYLTQSPE Trigger: TTCAGGAGACTGAGTGAGGTAAGAGACTGAGTTCCAGGCAGCCTGGGCTACAAAGGGAGATTGTCTCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | CATTTCTTGAGACAGGGTCTTATCACTAGGCCATCCTaGGGCATCCCAAGTGATTCTCCTGTTTCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: HFLRQGLITRPS*GIPSDSPVSAS Trigger: GGAGGCTGAAACAGGAGAATCACTTGGGATGCCCCAGGATGGCCTAGTGATAAGACCCTGTCTCAAGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CAA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGGGTGTGCTTATGATATaGCCATCCATGTACCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: NKFEWLCQDDREPASSAGGVLMI*PSMYQD Trigger: GTCCTGGTACATGGATGGCAATATCATAAGCACACC...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | TGGCGTTCCTCTCACTACATCACCCTTGCTGAGGGATaGATCCCACCCTTGAAACGATCAGGGCATTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: WRSSHYITLAEG*IPPLKRSGHSF Trigger: AAAAGAATGCCCTGATCGTTTCAAGGGTGGGATTCATCCCTCAGCAAGGGTGATGTAGTGAGAGGAACGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | AAGTTCAATGGCTGCTCAGACTTCCAGGCTGGCAGCTaGTGCACTACTGCATTTCTTGAGACAGGGTCTTAT | + |
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Preference number: 3 (lower is better) Translates to: KFNGCSDFQAGS*CTTAFLETGSY Trigger: ATAAGACCCTGTCTCAAGAAATGCAGTAGTGCACCAGCTGCCAGCCTGGAAGTCTGAGCAGCCATTGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR CCA 72 bp | AGGAACTGCAATACAGGACTACCCGAAATAGGGTCTTaGGTGGACTGGACCAGTGTTTCAATGCAAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: RNCNTGLPEIGS*VDWTSVSMQMP Trigger: TGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAAGACCCTATTTCGGGTAGTCCTGTATTGCAGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR-3UTR CAA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAAACCCGAAATAGGGTCTaGGGTGGACTGGACCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKTRNRV*GGLDQC Trigger: ACACTGGTCCAGTCCACCCAAGACCCTATTTCGGGT...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | CACCAGACTTTAGGAACACGAGAATCCAGGGGAGGGTaGGAGCAGAGGCCCTTATTTAAAATTACATGCAAG | + |
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Preference number: 3 (lower is better) Translates to: HQTLGTRESRGG*EQRPLFKITCK Trigger: CTTGCATGTAATTTTAAATAAGGGCCTCTGCTCTCACCCTCCCCTGGATTCTCGTGTTCCTAAAGTCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | ATTCTCACAGGCAGCAATACCCGGGCAGGGTGCTGGTaGGATGTTTATAAAAATGAATGTACATGGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: ILTGSNTRAGCW*DVYKNECTWME Trigger: CTCCATCCATGTACATTCATTTTTATAAACATCTCACCAGCACCCTGCCCGGGTATTGCTGCCTGTGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| 3UTR TCA 72 bp | GCAAAGCCTAGTTTGAGGACCATAAATGTTGTGCACTaGGCTTTTACTCAGTTGGCGCTATTACACCGAACA | + |
|
Preference number: 3 (lower is better) Translates to: AKPSLRTINVVH*AFTQLALLHRT Trigger: TGTTCGGTGTAATAGCGCCAACTGAGTAAAAGCTCAGTGCACAACATTTATGGTCCTCAAACTAGGCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR TCA 72 bp | CCAGCCCTAAAAACAACATGGTTTGATTTCACAGTATaGATTCCCCGGAATCTGGGAAAGGTAATTGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PALKTTWFDFTV*IPRNLGKVIVS Trigger: GCTAACAATTACCTTTCCCAGATTCCGGGGAATTCATACTGTGAAATCAAACCATGTTGTTTTTAGGGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR GCA 72 bp | ATCTCTGATGTAAATGAAGCTCTTGCATTAGTACTCTaGATTCTACTGGCAAGGCAACTGCAGTCACTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISDVNEALALVL*ILLARQLQSLK Trigger: CTTTAGTGACTGCAGTTGCCTTGCCAGTAGAATGCAGAGTACTAATGCAAGAGCTTCATTTACATCAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAACCTTACAATACAGTATaGAATACCTCCACATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKPYNTV*NTSTWK Trigger: CTTCCATGTGGAGGTATTCAATACTGTATTGTAAGG...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR TCA 72 bp | TTCAATGCAAATGCCAGCCCTAAAAACAACATGGTTTaGTTTCACAGTATGAATTCCCCGGAATCTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FNANASPKNNMV*FHSMNSPESGK Trigger: TTTCCCAGATTCCGGGGAATTCATACTGTGAAATCAAACCATGTTGTTTTTAGGGCTGGCATTTGCATTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTGCCATCAGAAAGGACTaGACCACTTCTTCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTAGSSVANSQVRAPAIRKD*TTSSVD Trigger: GTCCACTGAAGAAGTGGTGCAGTCCTTTCTGATGGC...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTTGTAGCGTACACAACTaGAGGCAGGACAGAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTAGSSVANSQVRAPCSVHN*RQDRKT Trigger: GGTTTTTCTGTCCTGCCTTCAGTTGTGTACGCTACA...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGAATTCACTGCCGAGCTaGCACAAGCGTCCCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGNSLPS*HKRPCW Trigger: CCAACAGGGACGCTTGTGTCAGCTCGGCAGTGAATT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACTGGTCCATCAGAGCCTaGAAACAGTGGTGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDWSIRA*KQWWSK Trigger: TTTGCTCCACCACTGTTTTCAGGCTCTGATGGACCA...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGAAGAGCACCGTCTACTaGAGGAGTAGGCCAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGKSTVY*RSRPRR Trigger: CCGTCTTGGCCTACTCCTTCAGTAGACGGTGCTCTT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGACTGGGGGCTGCTGCTaGCGTCTTCAAGGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGGLDQCFNANASPKNNMTGGCC*RLQGHR Trigger: CCGATGCCCTTGAAGACGTCAGCAGCAGCCCCCAGT...CATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTAAGACAAAGCCAACCTaGATGGCCTTCTCCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTAGSSVANSQVRAPKTKPT*MAFSFT Trigger: AGTAAAGGAGAAGGCCATCCAGGTTGGCTTTGTCTT...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGACTTCTTCAGTGGACTaGGGGCTGCTGCTGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGTSSVD*GLLLTS Trigger: AGACGTCAGCAGCAGCCCCCAGTCCACTGAAGAAGT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR CAA 72 bp | GTGATTCTCCTGTTTCAGCCTCCCATGGAGTTGGGATaGAACTTGTGCCAGCACGTGCAGTTCCCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VILLFQPPMELG*NLCQHVQFPVL Trigger: CAGTACAGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAGGAGAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR CAA 72 bp | TCCCAAGTGATTCTCCTGTTTCAGCCTCCCATGGAGTaGGGATTGAACTTGTGCCAGCACGTGCAGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQVILLFQPPME*GLNLCQHVQFP Trigger: AGGGAACTGCACGTGCTGGCACAAGTTCAATCCCAACTCCATGGGAGGCTGAAACAGGAGAATCACTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTCCACGACAGCGGAGATaGCGGTGTTGTAGAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQIPRQRR*RCCRAS Trigger: AGACGCTCTACAACACCGCCATCTCCGCTGTCGTGG...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTTTAGACAGAACGTTGTaGTACTCGAACACTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTAGSSVANSQVRAPLDRTL*YSNTFS Trigger: TGAGAAAGTGTTCGAGTATCACAACGTTCTGTCTAA...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGAAGGGCATCGGTCACTaGATACTGTCGATCTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGKGIGH*ILSISQ Trigger: TTGCGAGATCGACAGTATTCAGTGACCGATGCCCTT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGACTGCTCGGAACCAGTaGAGCATCTCATCATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGTARNQ*SISSCS Trigger: GCTACATGATGAGATGCTCCACTGGTTCCGAGCAGT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTAGTATTTTGGGTGTTTaGATCCGAAATGATCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTAGSSVANSQVRAPSILGV*IRNDLV Trigger: CACGAGATCATTTCGGATCCAAACACCCAAAATACT...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTTGTGTCAGAGTATTTTaGGTGTTTGGATCCGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTAGSSVANSQVRAPCVRVF*VFGSEM Trigger: CATTTCGGATCCAAACACCCAAAATACTCTGACACA...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTTTTGCCACCAAACACTaGCTGTCGAATGTCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQIFATKH*LSNVEG Trigger: GCCCTCGACATTCGACAGTCAGTGTTTGGTGGCAAA...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTTGCCAGGTGTCCCACTaGAAGGGCCACTTCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQICQVSH*KGHFII Trigger: GATTATGAAGTGGCCCTTTCAGTGGGACACCTGGCA...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR CAA 72 bp | CAGGAACTGCAATACAGGACTACCCGAAATAGGGTCTaGGGTGGACTGGACCAGTGTTTCAATGCAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QELQYRTTRNRV*GGLDQCFNANA Trigger: GGCATTTGCATTGAAACACTGGTCCAGTCCACCCAAGACCCTATTTCGGGTAGTCCTGTATTGCAGTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACATTAAATTCCCCAAATaGTTTCTTAGCCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDIKFPK*FLSQLQ Trigger: CTGCAGCTGGCTAAGAAAGCATTTGGGGAATTTAAT...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTGCAGCTCTATTTGCTTaGTGGCCATGTTTAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQIAALFA*WPCLDS Trigger: GCTGTCTAAACATGGCCAGCAAGCAAATAGAGCTGC...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGAACGCACCACTTGTATaGCTCATCATAGTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGNAPLV*LIIVAF Trigger: AAAAGCCACTATGATGAGGCATACAAGTGGTGCGTT...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTTGCTTTCACCCTCTTTaGAGAAGCCAGAAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQICFHPL*RSQKKM Trigger: CATCTTCTTCTGGCTTCTTCAAAGAGGGTGAAAGCA...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTTGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCTCATCTGCGGGGCTTAAATTTTCTCATTaGCTGATAGAGCCTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKFEWLCQDDREPASSAGLKFSH*LIEPSE Trigger: CTCGGAAGGCTCTATCAGTCAATGAGAAAATTTAAG...CCCCGCAGATGAGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTGAGAGCAGCTCTATTTaGTTGCTGGCCATGTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQIESSSI*LLAMFR Trigger: TCTAAACATGGCCAGCAAGCAAATAGAGCTGCTCTC...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGTTTCCATTTCGCACATaGAGCAACCTCACACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGGLDQCFNANASPKNNMFPFRT*SNLTQH Trigger: GTGTTGTGTGAGGTTGCTTCATGTGCGAAATGGAAA...CATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTTCTTCAGGTAGGATGTaGGTAATGATACCAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQISSGRM*VMIPMA Trigger: AGCCATTGGTATCATTACTCACATCCTACCTGAAGA...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAACACACAACACTCCACTaGTCGGAACCAGTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKHTTLH*SEPVEH Trigger: ATGCTCCACTGGTTCCGAGCAGTGGAGTGTTGTGTG...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTATGGCTCTTTCTGCATaGAATAGTGCATTGTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQIMALSA*NSALSN Trigger: ATTCGACAATGCACTATTTCATGCAGAAAGAGCCAT...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAACAAAGCCAACCTGGATaGCCTTCTCCTTTACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKQSQPG*PSPLLQ Trigger: CTGCAGTAAAGGAGAAGGCCATCCAGGTTGGCTTTG...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAAATCACTGTACCAGCCTaGATCAGAAAGAAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKITVPA*IRKKAT Trigger: GGTGGCTTTCTTTCTGATGCAGGCTGGTACAGTGAT...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTCTACATGAATATTTTTaGCACCAAACACTGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VIKGEGESQLHKLQVCQILHEYF*HQTLTV Trigger: GACAGTCAGTGTTTGGTGGCAAAAATATTCATGTAG...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGAGCTGCTCCTTAATCTaGATTGCTTTTATGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LGGLDQCFNANASPKNNMSCSLI*IAFMCI Trigger: AATGCACATAAAAGCAATTCAGATTAAGGAGCAGCT...CATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR GCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAAGGCTGCCTGGTAAATTaGAACAGACTGACAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKGCLVN*NRLTDI Trigger: AATATCTGTCAGTCTGTTGCAATTTACCAGGCAGCC...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAAGCTCTATTTGCTTGCTaGCCATGTTTAGACAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKALFAC*PCLDSL Trigger: TAAGCTGTCTAAACATGGCCAGCAAGCAAATAGAGC...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| 3UTR CAA 72 bp | AAGAATTTTAAAGGAAATTCAGTTGGAGGAATAAGTTaGAGTGGTTGTGTCAGGATGACAGAGAGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNFKGNSVGGIS*SGCVRMTESLP Trigger: AGGCAGGCTCTCTGTCATCCTGACACAACCACTCAAACTTATTCCTCCAACTGAATTTCCTTTAAAATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS CCA 90 bp | GGATGTCGCGGCGCGAGCGGATGTAGTTGTCCACGACAGCGGAGATaGCGGTGTTGTAGAGCGTCTCCGGGATCCACTCGAGCTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GCRGASGCSCPRQRR*RCCRASPGSTRAPR Trigger: CCGTGGAGCTCGAGTGGATCCCGGAGACGCTCTACAACACCGCCATCTCCGCTGTCGTGGACAACTACATCCGCTCGCGCCGCGACATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS TCA 90 bp | AGTGGACTGGGGGCTGCTGCTGACGTCTTCAAGGGCATCGGTCACTaGATACTGTCGATCTCGCAACCGGTTCCAGTTAGACAGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGLGAAADVFKGIGH*ILSISQPVPVRQNV Trigger: AACGTTCTGTCTAACTGGAACCGGTTGCGAGATCGACAGTATTCAGTGACCGATGCCCTTGAAGACGTCAGCAGCAGCCCCCAGTCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS TCA 90 bp | TCAGAAAGGACTGCACCACTTCTTCAGTGGACTGGGGGCTGCTGCTaGCGTCTTCAAGGGCATCGGTCACTGAATACTGTCGATCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SERTAPLLQWTGGCC*RLQGHRSLNTVDLA Trigger: TGCGAGATCGACAGTATTCAGTGACCGATGCCCTTGAAGACGTCAGCAGCAGCCCCCAGTCCACTGAAGAAGTGGTGCAGTCCTTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CAA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTACATCCACCACAACTTaGACTGGTAAGCCTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPPSTAGSSVANSQVRAPTSTTT*TGKPAV Trigger: TACAGCAGGCTTACCAGTCAAAGTTGTGGTGGATGT...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS GCA 90 bp | AAAGCCAACCTGGATGGCCTTCTCCTTTACTGCAGCGTCGGACTCTaGTATGTAAGAGCACCGTCTACTGAAGGAGTAGGCCAAGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: KANLDGLLLYCSVGL*YVRAPSTEGVGQDG Trigger: TCCGTCTTGGCCTACTCCTTCAGTAGACGGTGCTCTTACATAGCAGAGTCCGACGCTGCAGTAAAGGAGAAGGCCATCCAGGTTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CAA 90 bp | ACACCTCCAAGCACTGCCGGGAGCAGTGTAGCTAACAGCCAAGTCAGAGCCCCTGTGCTTTCACCCTCTTaGAAGAAGCCAGAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TPPSTAGSSVANSQVRAPVLSPS*KKPEED Trigger: ATCTTCTTCTGGCTTCTTCAAAGAGGGTGAAAGCAC...AGGGGCTCTGACTTGGCTGTTAGCTACACTGCTCCCGGCAGTGCTTGGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
||
| CDS-3UTR CAA 90 bp | TGGGTCACATGCATGCACAGGCTCCTCATGCCCCCAAATGGAATAGCACCAGACGGGCTGCCTGGTAAATaGCAACAGACTGACAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: WVTCMHRLLMPPNGIAPDGLPGK*QQTDRY Trigger: ATATCTGTCAGTCTGTTGCAATTTACCAGGCAGCCC...GTCTGGTGCTATTCCATTTGGGGGCATGAGGAGCCTGTGCATGCATGTGACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 90 bp | ACTGCTCGGAACCAGTGGAGCATCTCATCATGTAGCGTACACAACTaGAGGCAGGACAGAAAAACCTTTTCAGCATCACTGTACCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: TARNQWSISSCSVHN*RQDRKTFSASLYQP Trigger: AGGCTGGTACAGTGATGCTGAAAAGGTTTTTCTGTCCTGCCTTCAGTTGTGTACGCTACATGATGAGATGCTCCACTGGTTCCGAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS GCA 90 bp | GAGGTTCCCATAGTGCTTTGCAGTCTGTACATTAAATTCCCCAAATaGTTTCTTAGCCAGCTGCAGCGAAGACAAGTGCAAGTCGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: EVPIVLCSLYIKFPK*FLSQLQRRQVQVVC Trigger: GCACACGACTTGCACTTGTCTTCGCTGCAGCTGGCTAAGAAAGCATTTGGGGAATTTAATGTACAGACTGCAAAGCACTATGGGAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS GCA 90 bp | AAGAGTAGGCCAGGTCTTCATGAGCTGTTGCTACATGAATATTTTTaGCACCAAACACTGACTGTCGAATGTCGAGGGCTGCCTGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: KSRPGLHELLLHEYF*HQTLTVECRGLPGK Trigger: TTTACCAGGCAGCCCTCGACATTCGACAGTCAGTGTTTGGTGGCAAAAATATTCATGTAGCAACAGCTCATGAAGACCTGGCCTACTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS-3UTR CAA 90 bp | GTAATTAAGGGGGAAGGGGAGAGCCAGCTGCATAAACTGCAAGTGTGCCAAATTACACAAGCGTCCCTGTaGGTAAAGCTTGTAGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: VIKGEGESQLHKLQVCQITQASL*VKLVVN Trigger: GTTTACTACAAGCTTTACCAACAGGGACGCTTGTGT...AATTTGGCACACTTGCAGTTTATGCAGCTGGCTCTCCCCTTCCCCCTTAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS-3UTR CAA 90 bp | TTGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGAGCAGCTCTATTTGCTaGCTGGCCATGTTTAGACAG | + |
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Preference number: 5 (lower is better) Translates to: LGGLDQCFNANASPKNNMSSSIC*LAMFRQ Trigger: CTGTCTAAACATGGCCAGCAAGCAAATAGAGCTGCT...CATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS-3UTR CAA 90 bp | TTGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGCACTTCATAATCTTCTaGGCCAAGGAGCTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LGGLDQCFNANASPKNNMHFIIF*AKELLL Trigger: AAGGAGCAGCTCCTTGGCCAAGAAGATTATGAAGTG...CATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 90 bp | GTCTTCATGAGCTGTTGCTACATGAATATTTTTGCCACCAAACACTaGCTGTCGAATGTCGAGGGCTGCCTGGTAAATTGCAACAGACTG | + |
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Preference number: 5 (lower is better) Translates to: VFMSCCYMNIFATKH*LSNVEGCLVNCNRL Trigger: CAGTCTGTTGCAATTTACCAGGCAGCCCTCGACATTCGACAGTCAGTGTTTGGTGGCAAAAATATTCATGTAGCAACAGCTCATGAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 90 bp | ATACTGATTCATGTCATAATTATACAGAGATGCCAGGTGTCCCACTaGAAGGGCCACTTCATAATCTTCTTGGCCAAGGAGCTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ILIHVIIIQRCQVSH*KGHFIIFLAKELLL Trigger: AAGGAGCAGCTCCTTGGCCAAGAAGATTATGAAGTGGCCCTTTCAGTGGGACACCTGGCATCTCTGTATAATTATGACATGAATCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS-3UTR CAA 90 bp | TTGGGTGGACTGGACCAGTGTTTCAATGCAAATGCCAGCCCTAAAAACAACATGGTGTGTCAGAGTATTTaGGGTGTTTGGATCCGAAAT | + |
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Preference number: 5 (lower is better) Translates to: LGGLDQCFNANASPKNNMVCQSI*GVWIRN Trigger: ATTTCGGATCCAAACACCCAAAATACTCTGACACAC...CATGTTGTTTTTAGGGCTGGCATTTGCATTGAAACACTGGTCCAGTCCACCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 90 bp | GGGCTGCCTGGTAAATTGCAACAGACTGACAGATATTGTCTACATTaGGTAAGTAGAACCCATAATCTAGCAGTGTGTCAGAGTATTTTG | + |
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Preference number: 5 (lower is better) Translates to: GLPGKLQQTDRYCLH*VSRTHNLAVCQSIL Trigger: CAAAATACTCTGACACACTGCTAGATTATGGGTTCTACTTACTCAATGTAGACAATATCTGTCAGTCTGTTGCAATTTACCAGGCAGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS-3UTR CAA 90 bp | ATGCTACTCCTTGGTCACACAGACTATGTGGAAATAAAGGTGACTCTCACAAAACATCATAGTGGCTTTTaGCAAACAGGAGTGCACATA | + |
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Preference number: 5 (lower is better) Translates to: MLLLGHTDYVEIKVTLTKHHSGF*QTGVHI Trigger: TATGTGCACTCCTGTTTGCAAAAAGCCACTATGATG...TTTTGTGAGAGTCACCTTTATTTCCACATAGTCTGTGTGACCAAGGAGTAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CCA 72 bp | GGCGCGAGCGGATGTAGTTGTCCACGACAGCGGAGATaGCGGTGTTGTAGAGCGTCTCCGGGATCCACTCGA | + |
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Preference number: 6 (lower is better) Translates to: GASGCSCPRQRR*RCCRASPGSTR Trigger: TCGAGTGGATCCCGGAGACGCTCTACAACACCGCCATCTCCGCTGTCGTGGACAACTACATCCGCTCGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CCA 72 bp | GCCATCAGAAAGGACTGCACCACTTCTTCAGTGGACTaGGGGCTGCTGCTGACGTCTTCAAGGGCATCGGTC | + |
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Preference number: 6 (lower is better) Translates to: AIRKDCTTSSVD*GLLLTSSRASV Trigger: GACCGATGCCCTTGAAGACGTCAGCAGCAGCCCCCAGTCCACTGAAGAAGTGGTGCAGTCCTTTCTGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | GGGGCTGCTGCTGACGTCTTCAAGGGCATCGGTCACTaGATACTGTCGATCTCGCAACCGGTTCCAGTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GAAADVFKGIGH*ILSISQPVPVR Trigger: TCTAACTGGAACCGGTTGCGAGATCGACAGTATTCAGTGACCGATGCCCTTGAAGACGTCAGCAGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | ACTGCACCACTTCTTCAGTGGACTGGGGGCTGCTGCTaGCGTCTTCAAGGGCATCGGTCACTGAATACTGTC | + |
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Preference number: 6 (lower is better) Translates to: TAPLLQWTGGCC*RLQGHRSLNTV Trigger: GACAGTATTCAGTGACCGATGCCCTTGAAGACGTCAGCAGCAGCCCCCAGTCCACTGAAGAAGTGGTGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS GCA 72 bp | CTGGATGGCCTTCTCCTTTACTGCAGCGTCGGACTCTaGTATGTAAGAGCACCGTCTACTGAAGGAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LDGLLLYCSVGL*YVRAPSTEGVG Trigger: GCCTACTCCTTCAGTAGACGGTGCTCTTACATAGCAGAGTCCGACGCTGCAGTAAAGGAGAAGGCCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 90 bp | TCATTGCCTCAACGCACCACTTGTATGCCTCATCATAGTGGCTTTTaGCAAACAGGAGTGCACATAGTTCTCCGTAGAGAGCAGCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: SLPQRTTCMPHHSGF*QTGVHIVLRREQLY Trigger: ATAGAGCTGCTCTCTACGGAGAACTATGTGCACTCCTGTTTGCAAAAAGCCACTATGATGAGGCATACAAGTGGTGCGTTGAGGCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS GCA 72 bp | CCAGGTCTTCATGAGCTGTTGCTACATGAATATTTTTaGCACCAAACACTGACTGTCGAATGTCGAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGLHELLLHEYF*HQTLTVECRGL Trigger: CAGCCCTCGACATTCGACAGTCAGTGTTTGGTGGCAAAAATATTCATGTAGCAACAGCTCATGAAGACCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 72 bp | CAACGCACCACTTGTATGCCTCATCATAGTGGCTTTTaGCAAACAGGAGTGCACATAGTTCTCCGTAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: QRTTCMPHHSGF*QTGVHIVLRRE Trigger: CTCTCTACGGAGAACTATGTGCACTCCTGTTTGCAAAAAGCCACTATGATGAGGCATACAAGTGGTGCGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | ACGGAAGCTACCTTAACGCCATGGTCCATCAGAGCCTaGAAACAGTGGTGGAGCAAATGTCTTTTATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TEATLTPWSIRA*KQWWSKCLLSK Trigger: TTTGGATAAAAGACATTTGCTCCACCACTGTTTTCAGGCTCTGATGGACCATGGCGTTAAGGTAGCTTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | AACCAGTGGAGCATCTCATCATGTAGCGTACACAACTaGAGGCAGGACAGAAAAACCTTTTCAGCATCACTG | + |
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Preference number: 6 (lower is better) Translates to: NQWSISSCSVHN*RQDRKTFSASL Trigger: CAGTGATGCTGAAAAGGTTTTTCTGTCCTGCCTTCAGTTGTGTACGCTACATGATGAGATGCTCCACTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | AGCTGTTGCTACATGAATATTTTTGCCACCAAACACTaGCTGTCGAATGTCGAGGGCTGCCTGGTAAATTGC | + |
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Preference number: 6 (lower is better) Translates to: SCCYMNIFATKH*LSNVEGCLVNC Trigger: GCAATTTACCAGGCAGCCCTCGACATTCGACAGTCAGTGTTTGGTGGCAAAAATATTCATGTAGCAACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | CATGTCATAATTATACAGAGATGCCAGGTGTCCCACTaGAAGGGCCACTTCATAATCTTCTTGGCCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: HVIIIQRCQVSH*KGHFIIFLAKE Trigger: CTCCTTGGCCAAGAAGATTATGAAGTGGCCCTTTCAGTGGGACACCTGGCATCTCTGTATAATTATGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 72 bp | ACAGAATTCACTGCCGAGCTGACACAAGCGTCCCTGTaGGTAAAGCTTGTAGTAAACGTCGAACTGGATATT | + |
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Preference number: 6 (lower is better) Translates to: TEFTAELTQASL*VKLVVNVELDI Trigger: AATATCCAGTTCGACGTTTACTACAAGCTTTACCAACAGGGACGCTTGTGTCAGCTCGGCAGTGAATTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 90 bp | TGTACTGGTGAACGTAGGAAGAGTAGGCCAGGTCTTCATGAGCTGTaGCTACATGAATATTTTTGCCACCAAACACTGACTGTCGAATGT | + |
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Preference number: 6 (lower is better) Translates to: CTGERRKSRPGLHEL*LHEYFCHQTLTVEC Trigger: ACATTCGACAGTCAGTGTTTGGTGGCAAAAATATTCATGTAGCAACAGCTCATGAAGACCTGGCCTACTCTTCCTACGTTCACCAGTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 90 bp | ACTACACAAGCCTTAGAAGCTTGTCTTAAAACATCCACCACAACTTaGACTGGTAAGCCTGCTGTAATTTCCTTCATTGCCTCAACGCAC | + |
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Preference number: 6 (lower is better) Translates to: TTQALEACLKTSTTT*TGKPAVISFIASTH Trigger: GTGCGTTGAGGCAATGAAGGAAATTACAGCAGGCTTACCAGTCAAAGTTGTGGTGGATGTTTTAAGACAAGCTTCTAAGGCTTGTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS GCA 72 bp | ATAGTGCTTTGCAGTCTGTACATTAAATTCCCCAAATaGTTTCTTAGCCAGCTGCAGCGAAGACAAGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: IVLCSLYIKFPK*FLSQLQRRQVQ Trigger: TTGCACTTGTCTTCGCTGCAGCTGGCTAAGAAAGCATTTGGGGAATTTAATGTACAGACTGCAAAGCACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 72 bp | GCCTTAGAAGCTTGTCTTAAAACATCCACCACAACTTaGACTGGTAAGCCTGCTGTAATTTCCTTCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: ALEACLKTSTTT*TGKPAVISFIA Trigger: GGCAATGAAGGAAATTACAGCAGGCTTACCAGTCAAAGTTGTGGTGGATGTTTTAAGACAAGCTTCTAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CCA 72 bp | CATAATCTAGCAGTGTGTCAGAGTATTTTGGGTGTTTaGATCCGAAATGATCTCGTGCCAAATACACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: HNLAVCQSILGV*IRNDLVPNTLH Trigger: ATGCAGTGTATTTGGCACGAGATCATTTCGGATCCAAACACCCAAAATACTCTGACACACTGCTAGATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS CAA 72 bp | AGTAGAACCCATAATCTAGCAGTGTGTCAGAGTATTTaGGGTGTTTGGATCCGAAATGATCTCGTGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SRTHNLAVCQSI*GVWIRNDLVPN Trigger: ATTTGGCACGAGATCATTTCGGATCCAAACACCCAAAATACTCTGACACACTGCTAGATTATGGGTTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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| CDS TCA 72 bp | GGTAAATTGCAACAGACTGACAGATATTGTCTACATTaGGTAAGTAGAACCCATAATCTAGCAGTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GKLQQTDRYCLH*VSRTHNLAVCQ Trigger: CTGACACACTGCTAGATTATGGGTTCTACTTACTCAATGTAGACAATATCTGTCAGTCTGTTGCAATTTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018625.10 |
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