RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APOM (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024391

Ensembl transcript IDs: ENSMUST00000025249.7

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTaGCTTCTCCACTCGAAGCTGGGCTCCTATCTTGTCTGTCTAGGA +
Preference number: 1 (lower is better)
Translates to: TDKSSLLSTRGGRSR*LLHSKLGSYLVCLG
Trigger: TCCTAGACAGACAAGATAGGAGCCCAGCTTCGAGTGGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR GCA 90 bp AGGACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTGCACGAAGCTGGAGCTaGCTTGGGGCAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RTDKSSLLSTRGGRSRWLARSWS*LGAEPA
Trigger: TGCCGGCTCTGCCCCAAGGCAGCTCCAGCTTCGTGC...AAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CCA 90 bp CTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCCGCCCAGGTGGGGCTCTaGGGTCTCTGTGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LTNHLYYPREGAGVAGFSAQVGL*GLCVVH
Trigger: ATGGACGACACAGAGACCCCAGAGCCCCACCTGGGC...GGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CCA 90 bp CTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCCTACCACAGGCCCAGGTaGGGCTCTGGGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LTNHLYYPREGAGVAGFSYHRPR*GSGVSV
Trigger: CACAGAGACCCCAGAGCCCCACCTGGGCCTGTGGTA...GGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CCA 90 bp ACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCAAGCTGGAGCTGCCTTaGGGCAGAGCCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TDKSSLLSTRGGRSRWLLKLELP*GRAGSH
Trigger: ATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCAGCTT...GAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR TCA 90 bp AGGACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCCGTCTCTTTCAGCATaGTTCCTCCTGGGCACGAGC +
Preference number: 4 (lower is better)
Translates to: RTDKSSLLSTRGGRSRWLPSLSA*FLLGTS
Trigger: GCTCGTGCCCAGGAGGAATCATGCTGAAAGAGACGG...AAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR TCA 90 bp AGGACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTAGCGGGCAGGCCTCTTaGTTCCTGGGAGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: RTDKSSLLSTRGGRSRWLSGQAS*FLGVTK
Trigger: CTTAGTGACTCCCAGGAATCAAGAGGCCTGCCCGCT...AAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CCA 90 bp ACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCATGGTAGCACGAAGCTaGAGCTGCCTTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TDKSSLLSTRGGRSRWLLMVARS*SCLGAE
Trigger: CTCTGCCCCAAGGCAGCTCCAGCTTCGTGCTACCAT...GAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CCA 90 bp CTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCCCAGCATGATTCCTCCTaGGCACGAGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LTNHLYYPREGAGVAGFSQHDSS*ARAGEQ
Trigger: CTGTTCTCCAGCTCGTGCCCAGGAGGAATCATGCTG...GGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CCA 90 bp CTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCCCTCCTGGGCACGAGCTaGAGAACAGGTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LTNHLYYPREGAGVAGFSLLGTS*RTGLFS
Trigger: TGAAAACAGACCTGTTCTCCAGCTCGTGCCCAGGAG...GGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR TCA 90 bp ACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCAGCCGGCAGCCATGTTaGAGACAATATTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: TDKSSLLSTRGGRSRWLLSRQPC*RQYCPP
Trigger: CGGTGGACAATATTGTCTTCAACATGGCTGCCGGCT...GAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR TCA 90 bp AGGACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTGGCGCCCTTCAGTTCTaGGTTCCATGTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RTDKSSLLSTRGGRSRWLGALQF*VPCFLS
Trigger: GGAAAGGAAACATGGAACTCAGAACTGAAGGGCGCC...AAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR GCA 90 bp CTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTCTCCGAGAGAGAGCAGAGCTaGCCAAACTTGGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: LTNHLYYPREGAGVAGFSEREQS*PNLVEH
Trigger: ATGTTCCACCAAGTTTGGGCAGCTCTGCTCTCTCTC...GGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CCA 90 bp TCCGTGGTGGAGGCTGCTCCCGCAATAAAGTACCACAGGCCCAGGTaGGGCTCTGGGGTCTCTGTGTCGTCCATTCCCAGCGCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: SVVEAAPAIKYHRPR*GSGVSVSSIPSAVS
Trigger: ACTAACTGCGCTGGGAATGGACGACACAGAGACCCCAGAGCCCCACCTGGGCCTGTGGTACTTTATTGCGGGAGCAGCCTCCACCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CCA 90 bp GACCCCACTTTTCGTGCGGATGGTAGCACGAAGCTGGAGCTGCCTTaGGGCAGAGCCGGCAGCCATGTTGAAGACAATATTGTCCACCGG +
Preference number: 5 (lower is better)
Translates to: DPTFRADGSTKLELP*GRAGSHVEDNIVHR
Trigger: CCGGTGGACAATATTGTCTTCAACATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCAGCTTCGTGCTACCATCCGCACGAAAAGTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CCA 90 bp AAAGCGCTGGTAGCCCTGGCCCGTCTCTTTCAGCATGATTCCTCCTaGGCACGAGCTGGAGAACAGGTCTGTTTTCATGTCTGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: KALVALARLFQHDSS*ARAGEQVCFHVWAP
Trigger: GGGCGCCCAGACATGAAAACAGACCTGTTCTCCAGCTCGTGCCCAGGAGGAATCATGCTGAAAGAGACGGGCCAGGGCTACCAGCGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS TCA 90 bp TGTAGAGGAGAAAGCGCTGGTAGCCCTGGCCCGTCTCTTTCAGCATaGTTCCTCCTGGGCACGAGCTGGAGAACAGGTCTGTTTTCATGT +
Preference number: 5 (lower is better)
Translates to: CRGESAGSPGPSLSA*FLLGTSWRTGLFSC
Trigger: ACATGAAAACAGACCTGTTCTCCAGCTCGTGCCCAGGAGGAATCATGCTGAAAGAGACGGGCCAGGGCTACCAGCGCTTTCTCCTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS GCA 90 bp GCCGGCAGCCATGTTGAAGACAATATTGTCCACCGGATCAAAAGTTaGCAACTCTTCCGTGGTGGAGGCTGCTCCCGCAATAAAGTACCA +
Preference number: 5 (lower is better)
Translates to: AGSHVEDNIVHRIKS*QLFRGGGCSRNKVP
Trigger: TGGTACTTTATTGCGGGAGCAGCCTCCACCACGGAAGAGTTGGCAACTTTTGATCCGGTGGACAATATTGTCTTCAACATGGCTGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS TCA 90 bp AGCTGGAGAACAGGTCTGTTTTCATGTCTGGGCGCCCTTCAGTTCTaGGTTCCATGTTTCCTTTCCCTTCAGTCAATCGGTATGTCCACT +
Preference number: 5 (lower is better)
Translates to: SWRTGLFSCLGALQF*VPCFLSLQSIGMST
Trigger: AGTGGACATACCGATTGACTGAAGGGAAAGGAAACATGGAACTCAGAACTGAAGGGCGCCCAGACATGAAAACAGACCTGTTCTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CAA 90 bp AGGACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTGTCACTAAGAAGGCTTaGAAGTCCAAGCAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: RTDKSSLLSTRGGRSRWLVTKKA*KSKQEV
Trigger: GACCTCTTGCTTGGACTTCAAAGCCTTCTTAGTGAC...AAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS-3UTR CAA 90 bp AGGACTGACAAATCATCTTTATTATCCACGAGAGGGGGCAGGAGTCGCTGGCTTATGTTGAAGACAATATaGTCCACCGGATCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: RTDKSSLLSTRGGRSRWLMLKTI*STGSKV
Trigger: AACTTTTGATCCGGTGGACAATATTGTCTTCAACAT...AAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATGATTTGTCAGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS TCA 72 bp GAAAGCGCTGGTAGCCCTGGCCCGTCTCTTTCAGCATaGTTCCTCCTGGGCACGAGCTGGAGAACAGGTCTG +
Preference number: 6 (lower is better)
Translates to: ESAGSPGPSLSA*FLLGTSWRTGL
Trigger: CAGACCTGTTCTCCAGCTCGTGCCCAGGAGGAATCATGCTGAAAGAGACGGGCCAGGGCTACCAGCGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS GCA 72 bp CCACTTTTCGTGCGGATGGTAGCACGAAGCTGGAGCTaGCTTGGGGCAGAGCCGGCAGCCATGTTGAAGACA +
Preference number: 6 (lower is better)
Translates to: PLFVRMVARSWS*LGAEPAAMLKT
Trigger: TGTCTTCAACATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCAGCTTCGTGCTACCATCCGCACGAAAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS GCA 72 bp CGGATCAAAAGTTGCCAACTCTTCCGTGGTGGAGGCTaGTCCCGCAATAAAGTACCACAGGCCCAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: RIKSCQLFRGGG*SRNKVPQAQVG
Trigger: CCCCACCTGGGCCTGTGGTACTTTATTGCGGGAGCAGCCTCCACCACGGAAGAGTTGGCAACTTTTGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CAA 90 bp TGGAGCTGCCTTGGGGCAGAGCCGGCAGCCATGTTGAAGACAATATaGTCCACCGGATCAAAAGTTGCCAACTCTTCCGTGGTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: WSCLGAEPAAMLKTI*STGSKVANSSVVEA
Trigger: AGCCTCCACCACGGAAGAGTTGGCAACTTTTGATCCGGTGGACAATATTGTCTTCAACATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CCA 72 bp TTTCGTGCGGATGGTAGCACGAAGCTGGAGCTGCCTTaGGGCAGAGCCGGCAGCCATGTTGAAGACAATATT +
Preference number: 6 (lower is better)
Translates to: FRADGSTKLELP*GRAGSHVEDNI
Trigger: AATATTGTCTTCAACATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCAGCTTCGTGCTACCATCCGCACGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CCA 72 bp GTAGCCCTGGCCCGTCTCTTTCAGCATGATTCCTCCTaGGCACGAGCTGGAGAACAGGTCTGTTTTCATGTC +
Preference number: 6 (lower is better)
Translates to: VALARLFQHDSS*ARAGEQVCFHV
Trigger: GACATGAAAACAGACCTGTTCTCCAGCTCGTGCCCAGGAGGAATCATGCTGAAAGAGACGGGCCAGGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CAA 72 bp AGCTGGAGCTGCCTTGGGGCAGAGCCGGCAGCCATGTaGAAGACAATATTGTCCACCGGATCAAAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: SWSCLGAEPAAM*KTILSTGSKVA
Trigger: GGCAACTTTTGATCCGGTGGACAATATTGTCTTCAACATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CAA 90 bp GTAGCACGAAGCTGGAGCTGCCTTGGGGCAGAGCCGGCAGCCATGTaGAAGACAATATTGTCCACCGGATCAAAAGTTGCCAACTCTTCC +
Preference number: 6 (lower is better)
Translates to: VARSWSCLGAEPAAM*KTILSTGSKVANSS
Trigger: GGAAGAGTTGGCAACTTTTGATCCGGTGGACAATATTGTCTTCAACATGGCTGCCGGCTCTGCCCCAAGGCAGCTCCAGCTTCGTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CAA 72 bp CTTGGGGCAGAGCCGGCAGCCATGTTGAAGACAATATaGTCCACCGGATCAAAAGTTGCCAACTCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: LGAEPAAMLKTI*STGSKVANSSV
Trigger: CACGGAAGAGTTGGCAACTTTTGATCCGGTGGACAATATTGTCTTCAACATGGCTGCCGGCTCTGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS CCA 72 bp TGGGCACGAGCTGGAGAACAGGTCTGTTTTCATGTCTaGGCGCCCTTCAGTTCTGAGTTCCATGTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: WARAGEQVCFHV*APFSSEFHVSF
Trigger: AAAGGAAACATGGAACTCAGAACTGAAGGGCGCCCAGACATGAAAACAGACCTGTTCTCCAGCTCGTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS GCA 72 bp CATGTTGAAGACAATATTGTCCACCGGATCAAAAGTTaGCAACTCTTCCGTGGTGGAGGCTGCTCCCGCAAT +
Preference number: 6 (lower is better)
Translates to: HVEDNIVHRIKS*QLFRGGGCSRN
Trigger: ATTGCGGGAGCAGCCTCCACCACGGAAGAGTTGGCAACTTTTGATCCGGTGGACAATATTGTCTTCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS TCA 72 bp ACAGGTCTGTTTTCATGTCTGGGCGCCCTTCAGTTCTaGGTTCCATGTTTCCTTTCCCTTCAGTCAATCGGT +
Preference number: 6 (lower is better)
Translates to: TGLFSCLGALQF*VPCFLSLQSIG
Trigger: ACCGATTGACTGAAGGGAAAGGAAACATGGAACTCAGAACTGAAGGGCGCCCAGACATGAAAACAGACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7
CDS TCA 72 bp AGGCCTCTTGATTCCTGGGAGTCACTAAGAAGGCTTTaGAGTCCAAGCAAGAGGTCAGAGACTGGAATTCCT +
Preference number: 6 (lower is better)
Translates to: RPLDSWESLRRL*SPSKRSETGIP
Trigger: AGGAATTCCAGTCTCTGACCTCTTGCTTGGACTTCAAAGCCTTCTTAGTGACTCCCAGGAATCAAGAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025249.7