Pregenerated sensors for APOLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090698Ensembl transcript IDs: ENSMUST00000167323.3
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACGGCGTCAGGGAATGGCTTCAGCCGGATGATGGAAGGAGAGCCTaGGGTATACTCCAGTGCCCACACAGGCAGTCTAAAAGTGACAGC | + |
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Preference number: 1 (lower is better) Translates to: DGVREWLQPDDGRRA*GILQCPHRQSKSDS Trigger: GCTGTCACTTTTAGACTGCCTGTGTGGGCACTGGAGTATACCTCAGGCTCTCCTTCCATCATCCGGCTGAAGCCATTCCCTGACGCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 90 bp | AAGAGAAGGTGGCTAAGTCACACGACCGGTGGGGGACAGAGCCTGTaGTCAGTCCAAGACTGTTTAACTCAAAGGCCGTTGCTCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: KRRWLSHTTGGGQSL*SVQDCLTQRPLLSS Trigger: AGAGGAGAGCAACGGCCTTTGAGTTAAACAGTCTTGGACTGATCACAGGCTCTGTCCCCCACCGGTCGTGTGACTTAGCCACCTTCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 90 bp | AACTGGGGTGGGAAGAGCAGAGCAAGTCAGCTCCGCGGCCCAGGTTaGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: NWGGKSRASQLRGPG*VYNPYKDKKDHILS Trigger: ACTGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGCGGAGCTGACTTGCTCTGCTCTTCCCACCCCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 90 bp | GGGGACAGAGTAACTGGCTTTACAAGCACACAGCATAGTCTTTCTTaGGCTGCTGGGCCAGTCTTTCCTGGACTTTCTGAGAGTGACTCT | + |
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Preference number: 1 (lower is better) Translates to: GDRVTGFTSTQHSLS*AAGPVFPGLSESDS Trigger: AGAGTCACTCTCAGAAAGTCCAGGAAAGACTGGCCCAGCAGCCCAAGAAAGACTATGCTGTGTGCTTGTAAAGCCAGTTACTCTGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 90 bp | TTTGAAGCCATGCTGGGAAAGTATGCAATAGTCAGATTTGGTCTATaGGTGGATAAACTGGGGTGGGAAGAGCAGAGCAAGTCAGCTCCG | + |
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Preference number: 1 (lower is better) Translates to: FEAMLGKYAIVRFGL*VDKLGWEEQSKSAP Trigger: CGGAGCTGACTTGCTCTGCTCTTCCCACCCCAGTTTATCCACTCATAGACCAAATCTGACTATTGCATACTTTCCCAGCATGGCTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 90 bp | CATTGTATTTTTGAGATGAGGTCTCATTGTGTAGCTCGGGTGCCCTaGAACTCAACCTCTAGACCCTTCTGCCATCTGTGGATGGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: HCIFEMRSHCVARVP*NSTSRPFCHLWMES Trigger: ACTTTCCATCCACAGATGGCAGAAGGGTCTAGAGGTTGAGTTCCAGGGCACCCGAGCTACACAATGAGACCTCATCTCAAAAATACAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 90 bp | TTAGTACTTTGCTATATACTCAAAACATTCCCATTTTGGGTTATATaGAACAGGTCGGTAATGGAGGAGTATAACCCGAGACAAAGCACC | + |
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Preference number: 1 (lower is better) Translates to: LVLCYILKTFPFWVI*NRSVMEEYNPRQST Trigger: GGTGCTTTGTCTCGGGTTATACTCCTCCATTACCGACCTGTTCCATATAACCCAAAATGGGAATGTTTTGAGTATATAGCAAAGTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 90 bp | TTCAGAAGCTTAGTACTTTGCTATATACTCAAAACATTCCCATTTTaGGTTATATGGAACAGGTCGGTAATGGAGGAGTATAACCCGAGA | + |
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Preference number: 1 (lower is better) Translates to: FRSLVLCYILKTFPF*VIWNRSVMEEYNPR Trigger: TCTCGGGTTATACTCCTCCATTACCGACCTGTTCCATATAACCCAAAATGGGAATGTTTTGAGTATATAGCAAAGTACTAAGCTTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CAA 90 bp | AAACTGGGGTGGGAAGAGCAGAGCAAGTCAGCTCCGCGGCCCAGGTaGGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCAG | + |
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Preference number: 2 (lower is better) Translates to: KLGWEEQSKSAPRPR*GLQSLQRQKGSHTQ Trigger: CTGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGCGGAGCTGACTTGCTCTGCTCTTCCCACCCCAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCTTTCTTATCTCAGGGCTTCACAACAGGGTGTGTTCTTACCACCATCTGAAGTCACACGACCGGTaGGGGACAGAGCCTGTGATC | + |
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Preference number: 2 (lower is better) Translates to: RSFLISGLHNRVCSYHHLKSHDR*GTEPVI Trigger: GATCACAGGCTCTGTCCCCCACCGGTCGTGTGACTT...CAGATGGTGGTAAGAACACACCCTGTTGTGAAGCCCTGAGATAAGAAAGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR TCA 90 bp | CTACAGAGTGAGTTCTGGGACATCCAGGGCTGCCTAGAGAAAGACACAGTGTCACTAGAAATCCAAACCTaGCCTCCTGGAAAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LQSEFWDIQGCLEKDTVSLEIQT*PPGKSL Trigger: AAGGCTCTTTCCAGGAGGTCAGGTTTGGATTTCTAG...TGACACTGTGTCTTTCTCTAGGCAGCCCTGGATGTCCCAGAACTCACTCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTAGTACTTATGGCTTCAGCCGGATaGTGGAAGGAGAGCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SQMRTQQTTDKTFRSLVLMASAG*WKESLR Trigger: CCTCAGGCTCTCCTTCCATCATCCGGCTGAAGCCAT...AAGTACTAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | CTACAGAGTGAGTTCTGGGACATCCAGGGCTGCCTAGAGAAAGACACAGTGTCATATGAGTGGATAAACTaGGGTGGGAAGAGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LQSEFWDIQGCLEKDTVSYEWIN*GGKSRA Trigger: TGCTCTGCTCTTCCCACCCCAGTTTATCCACTCATA...TGACACTGTGTCTTTCTCTAGGCAGCCCTGGATGTCCCAGAACTCACTCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGAGGGAAAAAGACTCTAGAAATCCAAACCTGACCTCCTGGAAAGAGCCTGGGGGACAGAGCCTGTaGTCAGTCCAAGACTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: SLREKDSRNPNLTSWKEPGGQSL*SVQDCL Trigger: TAAACAGTCTTGGACTGATCACAGGCTCTGTCCCCC...AGGCTCTTTCCAGGAGGTCAGGTTTGGATTTCTAGAGTCTTTTTCCCTCAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCTTTCTTATCTCAGGGCTTCACAACAGGGTGTGTTCTTACCACCATCTGGTGGATAAACTGGGGTaGGAAGAGCAGAGCAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RSFLISGLHNRVCSYHHLVDKLG*EEQSKS Trigger: TGACTTGCTCTGCTCTTCCCACCCCAGTTTATCCAC...CAGATGGTGGTAAGAACACACCCTGTTGTGAAGCCCTGAGATAAGAAAGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGAGGGAAAAAGACTCTAGAAATCCAAACCTGACCTCCTGGAAAGAGCCTCTCAGCAAGAGAAGGTaGCTAAGTCACACGACCGGT | + |
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Preference number: 2 (lower is better) Translates to: SLREKDSRNPNLTSWKEPLSKRR*LSHTTG Trigger: ACCGGTCGTGTGACTTAGCCACCTTCTCTTGCTGAG...AGGCTCTTTCCAGGAGGTCAGGTTTGGATTTCTAGAGTCTTTTTCCCTCAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAGTCTCTCTCTCTCTCCTCAGGACTCCCCCATCTTACTTACAGGGATCGGATTTGGTCTATGAGTaGATAAACTGGGGTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLVSLSLLRTPPSYLQGSDLVYE*INWGGK Trigger: CTTCCCACCCCAGTTTATCCACTCATAGACCAAATC...CGATCCCTGTAAGTAAGATGGGGGAGTCCTGAGGAGAGAGAGAGAGACTAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTAGTACTTCTACAGAGTGAGTTCTaGGACATCCAGGGCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SQMRTQQTTDKTFRSLVLLQSEF*DIQGCL Trigger: TAGGCAGCCCTGGATGTCCCAGAACTCACTCTGTAG...AAGTACTAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCTTTCTTATCTCAGGGCTTCACAACAGGGTGTGTTCTTACCACCATCTGGATCACATACTCAGTTaGGATTACACAAGCGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: RSFLISGLHNRVCSYHHLDHILS*DYTSEK Trigger: CTTTTCGCTTGTGTAATCCCAACTGAGTATGTGATC...CAGATGGTGGTAAGAACACACCCTGTTGTGAAGCCCTGAGATAAGAAAGGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | AATTTTCACAACATGCCTACACATAAGAAAGAGAATGACCAAGCTAATCCCTCATCTTTCTTGGGCTGCTaGGCCAGTCTTTCCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: NFHNMPTHKKENDQANPSSFLGC*ASLSWT Trigger: AGTCCAGGAAAGACTGGCCCAGCAGCCCAAGAAAGA...TGAGGGATTAGCTTGGTCATTCTCTTTCTTATGTGTAGGCATGTTGTGAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAACATTTATTTCTCTCTTTTCATTTGCGCCACAAACCCTTTCGACCTGCTTCCCTTCTGCCATCTGTaGATGGAAAGTAGACACTCT | + |
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Preference number: 2 (lower is better) Translates to: PNIYFSLFICATNPFDLLPFCHL*MESRHS Trigger: AGAGTGTCTACTTTCCATCCACAGATGGCAGAAGGG...AAGCAGGTCGAAAGGGTTTGTGGCGCAAATGAAAAGAGAGAAATAAATGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTAGTACTTAAAACATTCCCATTTTaGGTTATATGGAACAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: SQMRTQQTTDKTFRSLVLKTFPF*VIWNRS Trigger: CGACCTGTTCCATATAACCCAAAATGGGAATGTTTT...AAGTACTAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CCA 90 bp | AATTTTCACAACATGCCTACACATAAGAAAGAGAATGACCAAGCTAATCCCTCACCATTTTGGGTTATATaGAACAGGTCGGTAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: NFHNMPTHKKENDQANPSPFWVI*NRSVME Trigger: CTCCATTACCGACCTGTTCCATATAACCCAAAATGG...TGAGGGATTAGCTTGGTCATTCTCTTTCTTATGTGTAGGCATGTTGTGAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 72 bp | TGGCTAAGTCACACGACCGGTGGGGGACAGAGCCTGTaGTCAGTCCAAGACTGTTTAACTCAAAGGCCGTTG | + |
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Preference number: 3 (lower is better) Translates to: WLSHTTGGGQSL*SVQDCLTQRPL Trigger: CAACGGCCTTTGAGTTAAACAGTCTTGGACTGATCACAGGCTCTGTCCCCCACCGGTCGTGTGACTTAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 72 bp | AGGGAATGGCTTCAGCCGGATGATGGAAGGAGAGCCTaGGGTATACTCCAGTGCCCACACAGGCAGTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: REWLQPDDGRRA*GILQCPHRQSK Trigger: TTTAGACTGCCTGTGTGGGCACTGGAGTATACCTCAGGCTCTCCTTCCATCATCCGGCTGAAGCCATTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | GGGAAGAGCAGAGCAAGTCAGCTCCGCGGCCCAGGTTaGGTCTACAATCCCTACAAAGACAAAAAGGATCAC | + |
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Preference number: 3 (lower is better) Translates to: GKSRASQLRGPG*VYNPYKDKKDH Trigger: GTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGCGGAGCTGACTTGCTCTGCTCTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 72 bp | GCGCCACAAACCCTTTCGACCTGCTTGCTTATAGAATaGCGGTCGAAAGGGAAAACCCACTCCACTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: APQTLSTCLLIE*RSKGKTHSTVP Trigger: TGGGACAGTGGAGTGGGTTTTCCCTTTCGACCGTCATTCTATAAGCAAGCAGGTCGAAAGGGTTTGTGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | TTTGAGATGAGGTCTCATTGTGTAGCTCGGGTGCCCTaGAACTCAACCTCTAGACCCTTCTGCCATCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FEMRSHCVARVP*NSTSRPFCHLW Trigger: CCACAGATGGCAGAAGGGTCTAGAGGTTGAGTTCCAGGGCACCCGAGCTACACAATGAGACCTCATCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGAGGGAAAAAGACTCTAGAAATCCAAACCTGACCTCCTGGAAAGAGCCTGCTCCGCGGCCCAGGTaGGGTCTACAATCCCTACAA | + |
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Preference number: 3 (lower is better) Translates to: SLREKDSRNPNLTSWKEPAPRPR*GLQSLQ Trigger: TTGTAGGGATTGTAGACCCAACCTGGGCCGCGGAGC...AGGCTCTTTCCAGGAGGTCAGGTTTGGATTTCTAGAGTCTTTTTCCCTCAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | GGAACTCAACCTCTAGACCCTTCTGCCATCTGTGGATaGAAAGTAGACACTCTCAGATGCGCACACAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GTQPLDPSAICG*KVDTLRCAHSR Trigger: TCTGCTGTGTGCGCATCTGAGAGTGTCTACTTTCCATCCACAGATGGCAGAAGGGTCTAGAGGTTGAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 72 bp | GCGAAAAGTCCTTCACACACACAAGGAGCTAAGGACTaGCGGAAGCCCTGCAAGAAGAGTTCCTATCATCCT | + |
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Preference number: 3 (lower is better) Translates to: AKSPSHTQGAKD*RKPCKKSSYHP Trigger: AGGATGATAGGAACTCTTCTTGCAGGGCTTCCGTCAGTCCTTAGCTCCTTGTGTGTGTGAAGGACTTTTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | GTAACTGGCTTTACAAGCACACAGCATAGTCTTTCTTaGGCTGCTGGGCCAGTCTTTCCTGGACTTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VTGFTSTQHSLS*AAGPVFPGLSE Trigger: CTCAGAAAGTCCAGGAAAGACTGGCCCAGCAGCCCAAGAAAGACTATGCTGTGTGCTTGTAAAGCCAGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR GCA 72 bp | TCTGCCATCTGTGGATGGAAAGTAGACACTCTCAGATaGGCACACAGCAGACCACTGATAAAACCTTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SAICGWKVDTLR*AHSRPLIKPSE Trigger: TTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGAGTGTCTACTTTCCATCCACAGATGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR TCA 72 bp | ATGCTGGGAAAGTATGCAATAGTCAGATTTGGTCTATaGGTGGATAAACTGGGGTGGGAAGAGCAGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: MLGKYAIVRFGL*VDKLGWEEQSK Trigger: CTTGCTCTGCTCTTCCCACCCCAGTTTATCCACTCATAGACCAAATCTGACTATTGCATACTTTCCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CAA 90 bp | CCTAACATTTATTTCTCTCTTTTCATTTGCGCCACAAACCCTTTCGACCTGCTTCCTAGAGGTGTGAATTaGAAGCCATGCTGGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: PNIYFSLFICATNPFDLLPRGVN*KPCWES Trigger: ACTTTCCCAGCATGGCTTCAAATTCACACCTCTAGG...AAGCAGGTCGAAAGGGTTTGTGGCGCAAATGAAAAGAGAGAAATAAATGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | TCTCTAGGATCAATTGTACTGAACTTTGCTAACCCCTaGCAAATCCTCCAATTTTCACAACATGCCTACACA | + |
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Preference number: 3 (lower is better) Translates to: SLGSIVLNFANP*QILQFSQHAYT Trigger: TGTGTAGGCATGTTGTGAAAATTGGAGGATTTGCCAGGGGTTAGCAAAGTTCAGTACAATTGATCCTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR-3UTR CAA 90 bp | CCTAACATTTATTTCTCTCTTTTCATTTGCGCCACAAACCCTTTCGACCTGCTTCAAAACATTCCCATTTaGGGTTATATGGAACAGGTC | + |
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Preference number: 3 (lower is better) Translates to: PNIYFSLFICATNPFDLLQNIPI*GYMEQV Trigger: GACCTGTTCCATATAACCCAAAATGGGAATGTTTTG...AAGCAGGTCGAAAGGGTTTGTGGCGCAAATGAAAAGAGAGAAATAAATGTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | AATCCCTACAAAGACAAAAAGGATCACATACTCAGTTaGGATTACACAAGCGAAAAGTCCTTCACACACACA | + |
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Preference number: 3 (lower is better) Translates to: NPYKDKKDHILS*DYTSEKSFTHT Trigger: TGTGTGTGTGAAGGACTTTTCGCTTGTGTAATCCCAACTGAGTATGTGATCCTTTTTGTCTTTGTAGGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CCA 72 bp | TGCTATATACTCAAAACATTCCCATTTTGGGTTATATaGAACAGGTCGGTAATGGAGGAGTATAACCCGAGA | + |
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Preference number: 3 (lower is better) Translates to: CYILKTFPFWVI*NRSVMEEYNPR Trigger: TCTCGGGTTATACTCCTCCATTACCGACCTGTTCCATATAACCCAAAATGGGAATGTTTTGAGTATATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR TCA 90 bp | GGTGGGAAGAGCAGAGCAAGTCAGCTCCGCGGCCCAGGTTGGGTCTACAATCCCCTGCGTCCCTGCCACTaGCAGAAGAACTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGKSRASQLRGPGWVYNPLRPCH*QKNSRQ Trigger: CTGCCTGGAGTTCTTCTGTCAGTGGCAGGGACGCAG...GGGATTGTAGACCCAACCTGGGCCGCGGAGCTGACTTGCTCTGCTCTTCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | AGTTTAGTCTCTCTCTCTCTCCTCAGGACTCCCCCATCTTACTTACAGGGATCGAGCTGCCCGCCACGTTaGCCGCCAGGGAGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLVSLSLLRTPPSYLQGSSCPPR*PPGSAC Trigger: GCAGGCGCTCCCTGGCGGCCAACGTGGCGGGCAGCT...CGATCCCTGTAAGTAAGATGGGGGAGTCCTGAGGAGAGAGAGAGAGACTAAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | GCGGCCCAGGTTGGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCAGGCCACGGCCGGCCTTaGTGCAGAGCTGGACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AAQVGSTIPTKTKRITYSGHGRP*CRAGPG Trigger: CCCGGGTCCAGCTCTGCACCAAGGCCGGCCGTGGCC...TGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR TCA 90 bp | TGGATAAACTGGGGTGGGAAGAGCAGAGCAAGTCAGCTCCGCGGCCCAGGTTGGCGACTCCAGGCTCTCTaGCAGTTTCTGAATCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: WINWGGKSRASQLRGPGWRLQAL*QFLNLG Trigger: GCCAAGATTCAGAAACTGTCAGAGAGCCTGGAGTCG...CCAACCTGGGCCGCGGAGCTGACTTGCTCTGCTCTTCCCACCCCAGTTTATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR TCA 90 bp | AGTTTAGTCTCTCTCTCTCTCCTCAGGACTCCCCCATCTTACTTACAGGGATCGGGTGACCGGGCTGAGTaGCAACCCCACGATGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLVSLSLLRTPPSYLQGSGDRAE*QPHDGC Trigger: GCAGCCATCGTGGGGTTGTCACTCAGCCCGGTCACC...CGATCCCTGTAAGTAAGATGGGGGAGTCCTGAGGAGAGAGAGAGAGACTAAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR TCA 90 bp | AGTTTAGTCTCTCTCTCTCTCCTCAGGACTCCCCCATCTTACTTACAGGGATCGCGGCACGTCTGGGGATaGGGAAGCCACGTGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SLVSLSLLRTPPSYLQGSRHVWG*GSHVSR Trigger: TCGGCTCACGTGGCTTCCTCATCCCCAGACGTGCCG...CGATCCCTGTAAGTAAGATGGGGGAGTCCTGAGGAGAGAGAGAGAGACTAAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR GCA 90 bp | AGACACTCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTACGGCGCTCAGAGAGCTaGCCGCCACGTTGGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RHSQMRTQQTTDKTFRSLRRSES*PPRWPP Trigger: TGGCGGCCAACGTGGCGGGCAGCTCTCTGAGCGCCG...TAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGAGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGGGAAAAAGACTCTAGAAATCCAAACCTGACCTCCTGGAAAGAGCCTGCGTCCCTCCCGCTCTaGAGCAGCTGGCGGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLREKDSRNPNLTSWKEPASLPL*SSWRSL Trigger: CAGGGACCGCCAGCTGCTGCAGAGCGGGAGGGACGC...AGGCTCTTTCCAGGAGGTCAGGTTTGGATTTCTAGAGTCTTTTTCCCTCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGGGAAAAAGACTCTAGAAATCCAAACCTGACCTCCTGGAAAGAGCCTCGCAGGCGCAGCACTTaGCTGTGCAGCCGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SLREKDSRNPNLTSWKEPRRRST*LCSRPR Trigger: CCGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCG...AGGCTCTTTCCAGGAGGTCAGGTTTGGATTTCTAGAGTCTTTTTCCCTCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTAGTACTTGGACGTGATGGTGACTaGCCCTCCGGCGGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQMRTQQTTDKTFRSLVLGRDGD*PSGGGH Trigger: GTGGCCACCGCCGGAGGGGCAGTCACCATCACGTCC...AAGTACTAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | ACCCTAACATTTATTTCTCTCTTTTCATTTGCGCCACAAACCCTTTCGACCTGCCCGCTCTGCAGCAGCTaGCGGTCCCTGCGTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTFISLFSFAPQTLSTCPLCSS*RSLRPC Trigger: GCAGGGACGCAGGGACCGCCAGCTGCTGCAGAGCGG...GCAGGTCGAAAGGGTTTGTGGCGCAAATGAAAAGAGAGAAATAAATGTTAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | GCGGCCCAGGTTGGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCATCCAGCAGCAATCCTTaGAAGCGCCGCAGCGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: AAQVGSTIPTKTKRITYSSSSNP*KRRSAS Trigger: CGATGCGCTGCGGCGCTTCCAAGGATTGCTGCTGGA...TGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | AATTTTCACAACATGCCTACACATAAGAAAGAGAATGACCAAGCTAATCCCTCACTGCCCCTCCGGCGGTaGCCACCCCTAAGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: NFHNMPTHKKENDQANPSLPLRR*PPLSPR Trigger: CCGTGGGCTTAGGGGTGGCCACCGCCGGAGGGGCAG...TGAGGGATTAGCTTGGTCATTCTCTTTCTTATGTGTAGGCATGTTGTGAAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | CTACAGAGTGAGTTCTGGGACATCCAGGGCTGCCTAGAGAAAGACACAGTGTCAACAGTTTCTGAATCTTaGCCTTCAGGACGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSEFWDIQGCLEKDTVSTVSES*PSGRPG Trigger: GCCAGGCCGTCCTGAAGGCCAAGATTCAGAAACTGT...TGACACTGTGTCTTTCTCTAGGCAGCCCTGGATGTCCCAGAACTCACTCTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR TCA 90 bp | GCGGCCCAGGTTGGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCAGATGAGGAAGCCACGTaGGCCGAAGAAGACGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAQVGSTIPTKTKRITYSDEEAT*AEEDDE Trigger: TTCATCGTCTTCTTCGGCTCACGTGGCTTCCTCATC...TGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CCA 90 bp | TTTTGTTTGTTTTTGCTGGTAACTTCACATTACCTCTGTACCAGTCTCTACATGTCTGGTCCTGGCAGGTaGCGGCGATCTCCTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLFLLVTSHYLCTSLYMSGPGR*RRSPAP Trigger: GGGTGCAGGAGATCGCCGCCACCTGCCAGGACCAGA...CATGTAGAGACTGGTACAGAGGTAATGTGAAGTTACCAGCAAAAACAAACAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS-3UTR CCA 90 bp | AATTTTCACAACATGCCTACACATAAGAAAGAGAATGACCAAGCTAATCCCTCAAGAAGCTCGCGCATCTaGTCCTGGCAGGTGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NFHNMPTHKKENDQANPSRSSRI*SWQVAA Trigger: CGCCGCCACCTGCCAGGACCAGATGCGCGAGCTTCT...TGAGGGATTAGCTTGGTCATTCTCTTTCTTATGTGTAGGCATGTTGTGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTAGTACTTGCACCTCCCGGGAATTaGAGAAGATCAGAGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQMRTQQTTDKTFRSLVLAPPGN*RRSERG Trigger: ACCTCTCTCTGATCTTCTGCAATTCCCGGGAGGTGC...AAGTACTAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS-3UTR TCA 90 bp | TCTCAGATGCGCACACAGCAGACCACTGATAAAACCTTCAGAAGCTTAGTACTTCTCTCTGACAGTTTCTaGATCTTGGCCTTCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SQMRTQQTTDKTFRSLVLLSDSF*ILAFRT Trigger: CGTCCTGAAGGCCAAGATTCAGAAACTGTCAGAGAG...AAGTACTAAGCTTCTGAAGGTTTTATCAGTGGTCTGCTGTGTGCGCATCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| 3UTR CAA 72 bp | CAATCCCTACAAAGACAAAAAGGATCACATACTCAGTaGGGATTACACAAGCGAAAAGTCCTTCACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: QSLQRQKGSHTQ*GLHKRKVLHTH Trigger: GTGTGTGTGAAGGACTTTTCGCTTGTGTAATCCCAACTGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS-3UTR TCA 90 bp | AATTTTCACAACATGCCTACACATAAGAAAGAGAATGACCAAGCTAATCCCTCAAGCCGAAGAAGACGATaGAGTAGACAGAGTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NFHNMPTHKKENDQANPSSRRRR*SRQSCK Trigger: TTTACAACTCTGTCTACTTCATCGTCTTCTTCGGCT...TGAGGGATTAGCTTGGTCATTCTCTTTCTTATGTGTAGGCATGTTGTGAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| 3UTR CAA 72 bp | CTTAGTACTTTGCTATATACTCAAAACATTCCCATTTaGGGTTATATGGAACAGGTCGGTAATGGAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSTLLYTQNIPI*GYMEQVGNGGV Trigger: TACTCCTCCATTACCGACCTGTTCCATATAACCCAAAATGGGAATGTTTTGAGTATATAGCAAAGTACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| 3UTR CAA 72 bp | AACCCACTCCACTGTCCCATGAAAGAAATAAACAATTaGTCTCTAGGATCAATTGTACTGAACTTTGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPLHCPMKEINN*SLGSIVLNFAN Trigger: GTTAGCAAAGTTCAGTACAATTGATCCTAGAGACAAATTGTTTATTTCTTTCATGGGACAGTGGAGTGGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS GCA 90 bp | CGGCGCTCAGAGAGCTGCCCGCCACGTTGGCCGCCAGGGAGCGCCTaGGTAGCCGCTCCAGCCTCCGGGCCACTTCGCGCAGGCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSESCPPRWPPGSA*VAAPASGPLRAGAA Trigger: TGCTGCGCCTGCGCGAAGTGGCCCGGAGGCTGGAGCGGCTACGCAGGCGCTCCCTGGCGGCCAACGTGGCGGGCAGCTCTCTGAGCGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 90 bp | AGCACTTGGCTGTGCAGCCGGCCACGGCGGTCCAGCAGCAATCCTTaGAAGCGCCGCAGCGCATCGGCGCCCTGCGGCTCCCAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: STWLCSRPRRSSSNP*KRRSASAPCGSQAA Trigger: GGCGGCCTGGGAGCCGCAGGGCGCCGATGCGCTGCGGCGCTTCCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS GCA 90 bp | CGCTCCAGCCTCCGGGCCACTTCGCGCAGGCGCAGCACTTGGCTGTaGAGCCGGCCACGGCGGTCCAGCAGCAATCCTTGGAAGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSLRATSRRRSTWL*SRPRRSSSNPWKRR Trigger: GCGGCGCTTCCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCGCGAAGTGGCCCGGAGGCTGGAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 90 bp | CGTAGCCGCTCCAGCCTCCGGGCCACTTCGCGCAGGCGCAGCACTTaGCTGTGCAGCCGGCCACGGCGGTCCAGCAGCAATCCTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSRSSLRATSRRRST*LCSRPRRSSSNPWK Trigger: CTTCCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCGCGAAGTGGCCCGGAGGCTGGAGCGGCTACG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS GCA 90 bp | GGGCCATGGAGGCGTCCCTCCCGCTCTGCAGCAGCTGGCGGTCCCTaGGTCCCTGCCACTGACAGAAGAACTCCAGGCAGCTCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPWRRPSRSAAAGGP*VPATDRRTPGSSEA Trigger: AGCTTCTGAGCTGCCTGGAGTTCTTCTGTCAGTGGCAGGGACGCAGGGACCGCCAGCTGCTGCAGAGCGGGAGGGACGCCTCCATGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS GCA 90 bp | TGGCCACGGCCGGCCTTGGTGCAGAGCTGGACCCGGGACTCCAGCTaGTCACTAAGTTCATCCAGGGCGCCAGTGCACGACTCCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPRPALVQSWTRDSS*SLSSSRAPVHDSRL Trigger: GAGCCTGGAGTCGTGCACTGGCGCCCTGGATGAACTTAGTGAGCAGCTGGAGTCCCGGGTCCAGCTCTGCACCAAGGCCGGCCGTGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS TCA 90 bp | TCCCTCCCGCTCTGCAGCAGCTGGCGGTCCCTGCGTCCCTGCCACTaGCAGAAGAACTCCAGGCAGCTCAGAAGCTCGCGCATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPLCSSWRSLRPCH*QKNSRQLRSSRIWS Trigger: GGACCAGATGCGCGAGCTTCTGAGCTGCCTGGAGTTCTTCTGTCAGTGGCAGGGACGCAGGGACCGCCAGCTGCTGCAGAGCGGGAGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 90 bp | AGAACTCCAGGCAGCTCAGAAGCTCGCGCATCTGGTCCTGGCAGGTaGCGGCGATCTCCTGCACCCTCCGCACCTCCCGGGAATTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTPGSSEARASGPGR*RRSPAPSAPPGNCR Trigger: TCTGCAATTCCCGGGAGGTGCGGAGGGTGCAGGAGATCGCCGCCACCTGCCAGGACCAGATGCGCGAGCTTCTGAGCTGCCTGGAGTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 90 bp | GTGGAGATCCTGAGGTTGTGGCCACGGCCGGCCTTGGTGCAGAGCTaGACCCGGGACTCCAGCTGCTCACTAAGTTCATCCAGGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VEILRLWPRPALVQS*TRDSSCSLSSSRAP Trigger: TGGCGCCCTGGATGAACTTAGTGAGCAGCTGGAGTCCCGGGTCCAGCTCTGCACCAAGGCCGGCCGTGGCCACAACCTCAGGATCTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS GCA 90 bp | CTCAGAAGCTCGCGCATCTGGTCCTGGCAGGTGGCGGCGATCTCCTaGACCCTCCGCACCTCCCGGGAATTGCAGAAGATCAGAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSSRIWSWQVAAIS*TLRTSRELQKIRER Trigger: CCTCTCTCTGATCTTCTGCAATTCCCGGGAGGTGCGGAGGGTGCAGGAGATCGCCGCCACCTGCCAGGACCAGATGCGCGAGCTTCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 90 bp | GGGCGCCAGTGCACGACTCCAGGCTCTCTGACAGTTTCTGAATCTTaGCCTTCAGGACGGCCTGGCTCACTTTGGTGGCCCCCTCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRQCTTPGSLTVSES*PSGRPGSLWWPPRH Trigger: GTGCCGAGGGGGCCACCAAAGTGAGCCAGGCCGTCCTGAAGGCCAAGATTCAGAAACTGTCAGAGAGCCTGGAGTCGTGCACTGGCGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS TCA 90 bp | TCATCCAGGGCGCCAGTGCACGACTCCAGGCTCTCTGACAGTTTCTaGATCTTGGCCTTCAGGACGGCCTGGCTCACTTTGGTGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRAPVHDSRLSDSF*ILAFRTAWLTLVAP Trigger: GGGGGCCACCAAAGTGAGCCAGGCCGTCCTGAAGGCCAAGATTCAGAAACTGTCAGAGAGCCTGGAGTCGTGCACTGGCGCCCTGGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS TCA 90 bp | CACTTTGGTGGCCCCCTCGGCACGTCTGGGGATGAGGAAGCCACGTaGGCCGAAGAAGACGATGAAGTAGACAGAGTTGTAAAGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HFGGPLGTSGDEEAT*AEEDDEVDRVVKGH Trigger: ATGGCCCTTTACAACTCTGTCTACTTCATCGTCTTCTTCGGCTCACGTGGCTTCCTCATCCCCAGACGTGCCGAGGGGGCCACCAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CAA 90 bp | GCGGCCCAGGTTGGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCAACGGCCTGGCTCACTTaGGTGGCCCCCTCGGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: AAQVGSTIPTKTKRITYSTAWLT*VAPSAR Trigger: ACGTGCCGAGGGGGCCACCAAAGTGAGCCAGGCCGT...TGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS TCA 90 bp | CTCACTAAGTTCATCCAGGGCGCCAGTGCACGACTCCAGGCTCTCTaGCAGTTTCTGAATCTTGGCCTTCAGGACGGCCTGGCTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTKFIQGASARLQAL*QFLNLGLQDGLAHF Trigger: AAAGTGAGCCAGGCCGTCCTGAAGGCCAAGATTCAGAAACTGTCAGAGAGCCTGGAGTCGTGCACTGGCGCCCTGGATGAACTTAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CAA 90 bp | CCTAACATTTATTTCTCTCTTTTCATTTGCGCCACAAACCCTTTCGACCTGCTTGAGCTGCCCGCCACGTaGGCCGCCAGGGAGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNIYFSLFICATNPFDLLELPAT*AARERL Trigger: CAGGCGCTCCCTGGCGGCCAACGTGGCGGGCAGCTC...AAGCAGGTCGAAAGGGTTTGTGGCGCAAATGAAAAGAGAGAAATAAATGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CAA 90 bp | ACCCTAACATTTATTTCTCTCTTTTCATTTGCGCCACAAACCCTTTCGACCTGCTGGCCACGGCCGGCCTaGGTGCAGAGCTGGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLTFISLFSFAPQTLSTCWPRPA*VQSWTR Trigger: CCGGGTCCAGCTCTGCACCAAGGCCGGCCGTGGCCA...GCAGGTCGAAAGGGTTTGTGGCGCAAATGAAAAGAGAGAAATAAATGTTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CAA 90 bp | GCGGCCCAGGTTGGGTCTACAATCCCTACAAAGACAAAAAGGATCACATACTCAGTCCAGCAGCAATCCTaGGAAGCGCCGCAGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AAQVGSTIPTKTKRITYSVQQQS*EAPQRI Trigger: GATGCGCTGCGGCGCTTCCAAGGATTGCTGCTGGAC...TGAGTATGTGATCCTTTTTGTCTTTGTAGGGATTGTAGACCCAACCTGGGCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CAA 90 bp | AGACAAAAAGGATCACATACTCAGTTGGGATTACACAAGCGAAAAGTCCTTCACGCGCAGGCGCAGCACTaGGCTGTGCAGCCGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RQKGSHTQLGLHKRKVLHAQAQH*AVQPAT Trigger: CGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCGC...GTGAAGGACTTTTCGCTTGTGTAATCCCAACTGAGTATGTGATCCTTTTTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS-3UTR CAA 90 bp | AATTTTCACAACATGCCTACACATAAGAAAGAGAATGACCAAGCTAATCCCTCACGCACCTCCCGGGAATaGCAGAAGATCAGAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NFHNMPTHKKENDQANPSRTSRE*QKIRER Trigger: CCTCTCTCTGATCTTCTGCAATTCCCGGGAGGTGCG...TGAGGGATTAGCTTGGTCATTCTCTTTCTTATGTGTAGGCATGTTGTGAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 72 bp | GGGCACCAGCGGCGCTCAGAGAGCTGCCCGCCACGTTaGCCGCCAGGGAGCGCCTGCGTAGCCGCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GHQRRSESCPPR*PPGSACVAAPA Trigger: GGCTGGAGCGGCTACGCAGGCGCTCCCTGGCGGCCAACGTGGCGGGCAGCTCTCTGAGCGCCGCTGGTGCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS GCA 72 bp | GAGAGCTGCCCGCCACGTTGGCCGCCAGGGAGCGCCTaGGTAGCCGCTCCAGCCTCCGGGCCACTTCGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESCPPRWPPGSA*VAAPASGPLRA Trigger: TGCGCGAAGTGGCCCGGAGGCTGGAGCGGCTACGCAGGCGCTCCCTGGCGGCCAACGTGGCGGGCAGCTCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CAA 72 bp | AGGGCACCAGCGGCGCTCAGAGAGCTGCCCGCCACGTaGGCCGCCAGGGAGCGCCTGCGTAGCCGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAPAALRELPAT*AARERLRSRSS Trigger: GCTGGAGCGGCTACGCAGGCGCTCCCTGGCGGCCAACGTGGCGGGCAGCTCTCTGAGCGCCGCTGGTGCCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CCA 72 bp | CTGTGCAGCCGGCCACGGCGGTCCAGCAGCAATCCTTaGAAGCGCCGCAGCGCATCGGCGCCCTGCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCSRPRRSSSNP*KRRSASAPCGS Trigger: GGAGCCGCAGGGCGCCGATGCGCTGCGGCGCTTCCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CAA 72 bp | GCTGTGCAGCCGGCCACGGCGGTCCAGCAGCAATCCTaGGAAGCGCCGCAGCGCATCGGCGCCCTGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVQPATAVQQQS*EAPQRIGALRL Trigger: GAGCCGCAGGGCGCCGATGCGCTGCGGCGCTTCCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS CAA 90 bp | CAGCACTTGGCTGTGCAGCCGGCCACGGCGGTCCAGCAGCAATCCTaGGAAGCGCCGCAGCGCATCGGCGCCCTGCGGCTCCCAGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QHLAVQPATAVQQQS*EAPQRIGALRLPGR Trigger: GCGGCCTGGGAGCCGCAGGGCGCCGATGCGCTGCGGCGCTTCCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS CAA 72 bp | CTCCAGCCTCCGGGCCACTTCGCGCAGGCGCAGCACTaGGCTGTGCAGCCGGCCACGGCGGTCCAGCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQPPGHFAQAQH*AVQPATAVQQQ Trigger: TTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCGCGAAGTGGCCCGGAGGCTGGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS GCA 72 bp | CTCCGGGCCACTTCGCGCAGGCGCAGCACTTGGCTGTaGAGCCGGCCACGGCGGTCCAGCAGCAATCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRATSRRRSTWL*SRPRRSSSNPW Trigger: CCAAGGATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCGCGAAGTGGCCCGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS CCA 72 bp | TCCAGCCTCCGGGCCACTTCGCGCAGGCGCAGCACTTaGCTGTGCAGCCGGCCACGGCGGTCCAGCAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRATSRRRST*LCSRPRRSSSN Trigger: ATTGCTGCTGGACCGCCGTGGCCGGCTGCACAGCCAAGTGCTGCGCCTGCGCGAAGTGGCCCGGAGGCTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS GCA 72 bp | CCGGCCTTGGTGCAGAGCTGGACCCGGGACTCCAGCTaGTCACTAAGTTCATCCAGGGCGCCAGTGCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: PALVQSWTRDSS*SLSSSRAPVHD Trigger: GTCGTGCACTGGCGCCCTGGATGAACTTAGTGAGCAGCTGGAGTCCCGGGTCCAGCTCTGCACCAAGGCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS CCA 72 bp | AACGCTGCGTCCAGATCAGTGGAGATCCTGAGGTTGTaGCCACGGCCGGCCTTGGTGCAGAGCTGGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NAASRSVEILRL*PRPALVQSWTR Trigger: CCGGGTCCAGCTCTGCACCAAGGCCGGCCGTGGCCACAACCTCAGGATCTCCACTGATCTGGACGCAGCGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS CCA 72 bp | CAGAAGAACTCCAGGCAGCTCAGAAGCTCGCGCATCTaGTCCTGGCAGGTGGCGGCGATCTCCTGCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QKNSRQLRSSRI*SWQVAAISCTL Trigger: GAGGGTGCAGGAGATCGCCGCCACCTGCCAGGACCAGATGCGCGAGCTTCTGAGCTGCCTGGAGTTCTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
||
| CDS CCA 72 bp | CTGAGGTTGTGGCCACGGCCGGCCTTGGTGCAGAGCTaGACCCGGGACTCCAGCTGCTCACTAAGTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LRLWPRPALVQS*TRDSSCSLSSS Trigger: GGATGAACTTAGTGAGCAGCTGGAGTCCCGGGTCCAGCTCTGCACCAAGGCCGGCCGTGGCCACAACCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CAA 90 bp | TGGCAGGTGGCGGCGATCTCCTGCACCCTCCGCACCTCCCGGGAATaGCAGAAGATCAGAGAGAGGTCGGACGTGATGGTGACTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: WQVAAISCTLRTSRE*QKIRERSDVMVTAP Trigger: AGGGGCAGTCACCATCACGTCCGACCTCTCTCTGATCTTCTGCAATTCCCGGGAGGTGCGGAGGGTGCAGGAGATCGCCGCCACCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS CAA 72 bp | GCGGCGATCTCCTGCACCCTCCGCACCTCCCGGGAATaGCAGAAGATCAGAGAGAGGTCGGACGTGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: AAISCTLRTSRE*QKIRERSDVMV Trigger: CACCATCACGTCCGACCTCTCTCTGATCTTCTGCAATTCCCGGGAGGTGCGGAGGGTGCAGGAGATCGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS TCA 72 bp | GCGCCAGTGCACGACTCCAGGCTCTCTGACAGTTTCTaGATCTTGGCCTTCAGGACGGCCTGGCTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: APVHDSRLSDSF*ILAFRTAWLTL Trigger: CAAAGTGAGCCAGGCCGTCCTGAAGGCCAAGATTCAGAAACTGTCAGAGAGCCTGGAGTCGTGCACTGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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| CDS TCA 72 bp | TTCATCCAGGGCGCCAGTGCACGACTCCAGGCTCTCTaGCAGTTTCTGAATCTTGGCCTTCAGGACGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FIQGASARLQAL*QFLNLGLQDGL Trigger: CAGGCCGTCCTGAAGGCCAAGATTCAGAAACTGTCAGAGAGCCTGGAGTCGTGCACTGGCGCCCTGGATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167323.3 |
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