Pregenerated sensors for APOL9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068246Ensembl transcript IDs: ENSMUST00000109775.4, ENSMUST00000230377.2, ENSMUST00000230742.2, ENSMUST00000230979.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCACATCCTTTGGTCTCTCGTCTCAGGCACCAGGGGGTCTCACCTaGTTGTGCTGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: STSFGLSSQAPGGLT*LCCVQQQAYTLGLS Trigger: CGAGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCCCTGGTGCCTGAGACGAGAGACCAAAGGATGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACCAGGGGGTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTTCTCTCGGACCTGACTaGAGTCTTGCTCTCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GTRGSHLIVLCSAAGLHTSLGPD*SLALLC Trigger: ACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGA...AGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCCCTGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR CAA 90 bp | CATGATGTGTTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTaGTGGGGTCTTGTTTGCAGTAGCTCAGCTGGGGAGGGCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HDVFKEHTPFSLVCL*WGLVCSSSAGEGFL Trigger: TAGAAAGCCCTCCCCAGCTGAGCTACTGCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAACACATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR TCA 72 bp | TTCAGCAGCAGGCCTACACACTGGGTCTCTCGGACCTaGCTGCAGTCTTGCTCTCCTCTGTCCAGGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FSSRPTHWVSRT*LQSCSPLSRSS Trigger: GGAGGACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTAGGCCTGCTGCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR CCA 72 bp | CAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTaGTCTCTCGTCTCAGGCACCAGGGGGTCTCACCTG | + |
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Preference number: 3 (lower is better) Translates to: QSFQSLSQQHIL*SLVSGTRGSHL Trigger: CAGGTGAGACCCCCTGGTGCCTGAGACGAGAGACCAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTACAGCAGCACATCCTTaGGTCTCTCGTCTCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: VFKEHTPFSLVCLLWGLVTAAHP*VSRLRH Trigger: GTGCCTGAGACGAGAGACCAAAGGATGTGCTGCTGT...AACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR GCA 72 bp | GATGTGTTTAAAGAGCACACACCTTTCTCTCTGGTTTaGCTTTTGTGGGGTCTTGTTTGCAGTAGCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: DVFKEHTPFSLV*LLWGLVCSSSA Trigger: AGCTGAGCTACTGCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAACACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR TCA 90 bp | TGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTCGGACCTGACTGCAGTCTTGGCCTCCCCCAGCACATaGGTGCCAGTCAGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CVQQQAYTLGLSDLTAVLASPST*VPVRAA Trigger: AGCTGCTCTGACTGGCACTCATGTGCTGGGGGAGGC...CAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTAGGCCTGCTGCTGAACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCACCAGGGGGTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACATCAGTCACAGTAGCTaGTACCCCCAGCCCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGTRGSHLIVLCSAAGLHISHSS*YPQPQA Trigger: GGCTTGGGGCTGGGGGTAGCAGCTACTGTGACTGAT...GTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCCCTGGTGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | CTACACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTCCCGTTGGGCAGAGATaGTTCCTGTGGTGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LHTGSLGPDCSLALLCPGPVGQR*FLWWPG Trigger: TCCTGGCCACCACAGGAAGCATCTCTGCCCAACGGG...ACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | GGGGTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTCCCGTTGGGCAGAGATaGTTCCTGTGGTGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GVSPDCAVFSSRPTHWVSPVGQR*FLWWPG Trigger: TCCTGGCCACCACAGGAAGCATCTCTGCCCAACGGG...AGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | ACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTCCTCTCCCTCAGAGCTTTGTaGAGGGCCACTGCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLGLSDLTAVLLSSVQVLSLRAL*RATALS Trigger: GGAGAGAGCAGTGGCCCTCCACAAAGCTCTGAGGGA...GAGGACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCACCAGGGGGTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACCCCCCAGCACATGAGTaGCAGTCAGAGCAGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: SGTRGSHLIVLCSAAGLHPPAHE*QSEQLQ Trigger: TTGAAGCTGCTCTGACTGGCACTCATGTGCTGGGGG...GTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCCCTGGTGCCTGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | GGCACCAGGGGGTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTCACCAGACTTCCCTCTaGTGTCACAGGTGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GTRGSHLIVLCSAAGLHTHQTSL*CHRCQK Trigger: TTTCTGGCACCTGTGACAGCAGAGGGAAGTCTGGTG...AGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCCCTGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | GTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTCGGCCCCCAGCACATGAGTaGCAGTCAGAGCAGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: VSPDCAVFSSRPTHWVSRPPAHE*QSEQLQ Trigger: TTGAAGCTGCTCTGACTGGCACTCATGTGCTGGGGG...CCGAGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | CTACACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTTTTGTGGAGGGCCACTaGTCTCTCCCTGGACAACTT | + |
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Preference number: 4 (lower is better) Translates to: LHTGSLGPDCSLALLCPGFVEGH*SLPGQL Trigger: AAGTTGTCCAGGGAGAGAGCAGTGGCCCTCCACAAA...ACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | CATCCTTTGGTCTCTCGTCTCAGGCACCAGGGGGTCTCACCTGATTGTGCTGTGCTCTGCTGTCACAGGTaGCAGAAAGAGACCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HPLVSRLRHQGVSPDCAVLCCHR*QKETKE Trigger: CTCCTTGGTCTCTTTCTGGCACCTGTGACAGCAGAG...CACAGCACAATCAGGTGAGACCCCCTGGTGCCTGAGACGAGAGACCAAAGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | CTACACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTTGGACAACTTGGCCTTaGATACAAACGCCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHTGSLGPDCSLALLCPGWTTWP*IQTPAR Trigger: CCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCA...ACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR TCA 90 bp | TACACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTCGATGCTTTGACTCTTTaGCAAGGCTGTCCACGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YTLGLSDLTAVLLSSVQVDALTL*QGCPRH Trigger: GTGACGTGGACAGCCTTGTCAAAGAGTCAAAGCATC...GACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | TCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTCGGACACCAGACTTCCCTCTaGTGTCACAGGTGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SHLIVLCSAAGLHTGSLGHQTSL*CHRCQK Trigger: TTTCTGGCACCTGTGACAGCAGAGGGAAGTCTGGTG...TCCGAGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | TCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGGTCTCTCGTCTCAGGATCAGTCACAGTAGCTaGTACCCCCAGCCCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SIFPVPLTAAHPLVSRLRISHSS*YPQPQA Trigger: GGCTTGGGGCTGGGGGTAGCAGCTACTGTGACTGAT...CCTGAGACGAGAGACCAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | TCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTCGGAGGCTTCATTGCTCATTaGCAGAGGGGTTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SHLIVLCSAAGLHTGSLGGFIAH*QRGSFQ Trigger: CTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCC...TCCGAGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | CTACACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTTGGTGGCCAGGATCCTaGCATCTTCTTCTAAACGAG | + |
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Preference number: 4 (lower is better) Translates to: LHTGSLGPDCSLALLCPGWWPGS*HLLLNE Trigger: CTCGTTTAGAAGAAGATGCCAGGATCCTGGCCACCA...ACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR TCA 90 bp | TTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTTGCGCCTCCCCCAGCACATaGGTGCCAGTCAGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FKEHTPFSLVCLLWGLVCASPST*VPVRAA Trigger: AGCTGCTCTGACTGGCACTCATGTGCTGGGGGAGGC...GCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | TCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGGTCTCTCGTCTCAGGAGATGCTTCCTGTGGTaGCCAGGATCCTGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: SIFPVPLTAAHPLVSRLRRCFLW*PGSWHL Trigger: AAGATGCCAGGATCCTGGCCACCACAGGAAGCATCT...CCTGAGACGAGAGACCAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGGTCTCCTCTGCTGTCACAGGTaGCAGAAAGAGACCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SPEFNLSSPSHSSTSFGLLCCHR*QKETKE Trigger: CTCCTTGGTCTCTTTCTGGCACCTGTGACAGCAGAG...GAGACCAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGGTCTCTTGGACAACTTGGCCTTaGATACAAACGCCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VQSSIFPVPLTAAHPLVSWTTWP*IQTPAR Trigger: CCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCA...AGAGACCAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAGTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGTCCCTCAGAGCTTTGTaGAGGGCCACTGCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: CLVQSSIFPVPLTAAHPLSLRAL*RATALS Trigger: GGAGAGAGCAGTGGCCCTCCACAAAGCTCTGAGGGA...CAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGACTAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | AAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTTGCAGTAGTCAGCCACCACGTTaGAGATGGTGCAGCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KEHTPFSLVCLLWGLVCSSQPPR*RWCSPC Trigger: ACAGGGGCTGCACCATCTCCAACGTGGTGGCTGACT...ACTGCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | GGAACAACAGAAACGGTTTATTTAGGGGACCATGACATGCCTGAGGATGGGTGTGGCTTCATTGCTCATTaGCAGAGGGGTTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GTTETVYLGDHDMPEDGCGFIAH*QRGSFQ Trigger: CTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCC...ACACCCATCCTCAGGCATGTCATGGTCCCCTAAATAAACCGTTTCTGTTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| 3UTR CAA 72 bp | TTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTaGTGGGGTCTTGTTTGCAGTAGCTCAGCTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FKEHTPFSLVCL*WGLVCSSSAGE Trigger: CTCCCCAGCTGAGCTACTGCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | GTGTTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTTTTGTGGAGGGCCACTaGTCTCTCCCTGGACAACTT | + |
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Preference number: 4 (lower is better) Translates to: VFKEHTPFSLVCLLWGLVFVEGH*SLPGQL Trigger: AAGTTGTCCAGGGAGAGAGCAGTGGCCCTCCACAAA...AACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CCA 90 bp | TTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTTGCAGATGCTTCCTGTGGTaGCCAGGATCCTGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: FKEHTPFSLVCLLWGLVCRCFLW*PGSWHL Trigger: AAGATGCCAGGATCCTGGCCACCACAGGAAGCATCT...GCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAGTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGTCAAAAACTTCTCCCTaGCTTTCAGACCTTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: CLVQSSIFPVPLTAAHPLSKTSP*LSDLFE Trigger: TTCAAAAAGGTCTGAAAGGCAGGGAGAAGTTTTTGA...CAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGACTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CCA 90 bp | GCCAGAGGGGTTCCTTCCAGCCTGGCCCGCACCTGCATAGCCCGTTaGGCAGAGATGCTTCCTGTGGTGGCCAGGATCCTGGCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ARGVPSSLARTCIAR*AEMLPVVARILASS Trigger: AGAAGATGCCAGGATCCTGGCCACCACAGGAAGCATCTCTGCCCAACGGGCTATGCAGGTGCGGGCCAGGCTGGAAGGAACCCCTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS TCA 90 bp | CAGCCGACTCTGACGCAGACCCTTCGTACAGATGCTTTGACTCTTTaGCAAGGCTGTCCACGTCACTCCAGAGGGCGGCACCTGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QPTLTQTLRTDALTL*QGCPRHSRGRHLRW Trigger: CCACCGCAGGTGCCGCCCTCTGGAGTGACGTGGACAGCCTTGTCAAAGAGTCAAAGCATCTGTACGAAGGGTCTGCGTCAGAGTCGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | ACACTGGGTCTCTCGGACCTGACTGCAGTCTTGCTCTCCTCTGTCCAGGTCCTCAGTTCCCTCAGAGCTTaGTGGAGGGCCACTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TLGLSDLTAVLLSSVQVLSSLRA*WRATAL Trigger: GAGAGCAGTGGCCCTCCACAAAGCTCTGAGGGAACT...GAGGACCTGGACAGAGGAGAGCAAGACTGCAGTCAGGTCCGAGAGACCCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | GGGGTCTCACCTGATTGTGCTGTGTTCAGCAGCAGGCCTACACACTGGGTCTCTTGGATCCGGGCTTCATaGCTCATTGCCAGAGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GVSPDCAVFSSRPTHWVSWIRAS*LIARGV Trigger: AACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCA...AGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGAGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGGTCTCTCCAGCCCCAAGCCAGTaGCTGAGAGCACCAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: VQSSIFPVPLTAAHPLVSPAPSQ*LRAPDF Trigger: GAAGTCTGGTGCTCTCAGCAACTGGCTTGGGGCTGG...AGAGACCAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTTGCAGTGAGTCAGCCACCACGTaGGAGATGGTGCAGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: KEHTPFSLVCLLWGLVCSESATT*EMVQPL Trigger: CAGGGGCTGCACCATCTCCAACGTGGTGGCTGACTC...ACTGCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS GCA 90 bp | GTGGTCAGCCAGGGCATGGAGCTGACTGATATGCTCCACCAGCTCTaGTTTCAAGCGAGGAAAGACTTTCAAAAACTTCTCCCTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: VVSQGMELTDMLHQL*FQARKDFQKLLPAF Trigger: AAAGGCAGGGAGAAGTTTTTGAAAGTCTTTCCTCGCTTGAAAGCAGAGCTGGTGGAGCATATCAGTCAGCTCCATGCCCTGGCTGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAGTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGAGTTCCCTCAGAGCTTaGTGGAGGGCCACTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CLVQSSIFPVPLTAAHPLSSLRA*WRATAL Trigger: GAGAGCAGTGGCCCTCCACAAAGCTCTGAGGGAACT...CAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGACTAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | GTGTTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTCCAGCCCCAAGCCAGTaGCTGAGAGCACCAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: VFKEHTPFSLVCLLWGLVPAPSQ*LRAPDF Trigger: GAAGTCTGGTGCTCTCAGCAACTGGCTTGGGGCTGG...AACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | GGGATGGGGCTCATGATGTGTTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCCATCCAAAACCCTGCTaGTTTCCTCCACGATTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GMGLMMCLKSTHLSLWFAHPKPC*FPPRLR Trigger: CCTCAATCGTGGAGGAAACAAGCAGGGTTTTGGATG...GGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAACACATCATGAGCCCCATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS GCA 90 bp | AGACTTTCAAAAACTTCTCCCTGCCTTTCAGACCTTTTTGAAGTCTaGCTCTGTCTGCTATGGCCAAGAGCGCTGTCAGTTCCCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RLSKTSPCLSDLFEV*LCLLWPRALSVPSE Trigger: CTCTGAGGGAACTGACAGCGCTCTTGGCCATAGCAGACAGAGGCAGACTTCAAAAAGGTCTGAAAGGCAGGGAGAAGTTTTTGAAAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | GGAACAACAGAAACGGTTTATTTAGGGGACCATGACATGCCTGAGGATGGGTGTCATCCAAAACCCTGCTaGTTTCCTCCACGATTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GTTETVYLGDHDMPEDGCHPKPC*FPPRLR Trigger: CCTCAATCGTGGAGGAAACAAGCAGGGTTTTGGATG...ACACCCATCCTCAGGCATGTCATGGTCCCCTAAATAAACCGTTTCTGTTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAGTCCAGAGTTCAATCTTTCCAGTCCCTCTCACAGCAGCACATCCTTTGGCCTTTCAGACCTTTTaGAAGTCTGCCTCTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CLVQSSIFPVPLTAAHPLAFQTF*KSASVC Trigger: GCAGACAGAGGCAGACTTCAAAAAGGTCTGAAAGGC...CAAAGGATGTGCTGCTGTGAGAGGGACTGGAAAGATTGAACTCTGGACTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS-3UTR CAA 90 bp | TTTAAAGAGCACACACCTTTCTCTCTGGTTTGCCTTTTGTGGGGTCTTGTTTGCGCCTTTCAGACCTTTTaGAAGTCTGCCTCTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FKEHTPFSLVCLLWGLVCAFQTF*KSASVC Trigger: GCAGACAGAGGCAGACTTCAAAAAGGTCTGAAAGGC...GCAAACAAGACCCCACAAAAGGCAAACCAGAGAGAAAGGTGTGTGCTCTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS GCA 72 bp | GGTGGCGGCACGTTGGATCCGGGCTTCATTGCTCATTaGCAGAGGGGTTCCTTCCAGCCTGGCCCGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: GGGTLDPGFIAH*QRGSFQPGPHL Trigger: CAGGTGCGGGCCAGGCTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCAACGTGCCGCCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS GCA 72 bp | CACCTGCGGTGGCGGCACGTTGGATCCGGGCTTCATTaGTCATTGCCAGAGGGGTTCCTTCCAGCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HLRWRHVGSGLH*SLPEGFLPAWP Trigger: GGGCCAGGCTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCAACGTGCCGCCACCGCAGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | CGGTGGCGGCACGTTGGATCCGGGCTTCATTGCTCATaGCCAGAGGGGTTCCTTCCAGCCTGGCCCGCACCT | + |
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Preference number: 6 (lower is better) Translates to: RWRHVGSGLHCS*PEGFLPAWPAP Trigger: AGGTGCGGGCCAGGCTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCAACGTGCCGCCACCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | GCACCTGCGGTGGCGGCACGTTGGATCCGGGCTTCATaGCTCATTGCCAGAGGGGTTCCTTCCAGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: APAVAARWIRAS*LIARGVPSSLA Trigger: GGCCAGGCTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCAACGTGCCGCCACCGCAGGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | GTCACTCCAGAGGGCGGCACCTGCGGTGGCGGCACGTaGGATCCGGGCTTCATTGCTCATTGCCAGAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: VTPEGGTCGGGT*DPGFIAHCQRG Trigger: ACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCAACGTGCCGCCACCGCAGGTGCCGCCCTCTGGAGTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 90 bp | GCTGTCCACGTCACTCCAGAGGGCGGCACCTGCGGTGGCGGCACGTaGGATCCGGGCTTCATTGCTCATTGCCAGAGGGGTTCCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVHVTPEGGTCGGGT*DPGFIAHCQRGSFQ Trigger: CTGGAAGGAACCCCTCTGGCAATGAGCAATGAAGCCCGGATCCAACGTGCCGCCACCGCAGGTGCCGCCCTCTGGAGTGACGTGGACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CCA 72 bp | GTTCCTTCCAGCCTGGCCCGCACCTGCATAGCCCGTTaGGCAGAGATGCTTCCTGTGGTGGCCAGGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: VPSSLARTCIAR*AEMLPVVARIL Trigger: CAGGATCCTGGCCACCACAGGAAGCATCTCTGCCCAACGGGCTATGCAGGTGCGGGCCAGGCTGGAAGGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | GGTTCCTTCCAGCCTGGCCCGCACCTGCATAGCCCGTaGGGCAGAGATGCTTCCTGTGGTGGCCAGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: GSFQPGPHLHSP*GRDASCGGQDP Trigger: AGGATCCTGGCCACCACAGGAAGCATCTCTGCCCAACGGGCTATGCAGGTGCGGGCCAGGCTGGAAGGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS GCA 72 bp | ATTGCCAGAGGGGTTCCTTCCAGCCTGGCCCGCACCTaGATAGCCCGTTGGGCAGAGATGCTTCCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IARGVPSSLART*IARWAEMLPVV Trigger: CACCACAGGAAGCATCTCTGCCCAACGGGCTATGCAGGTGCGGGCCAGGCTGGAAGGAACCCCTCTGGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CCA 72 bp | GGAGGGCCACTGCTCTCTCCCTGGACAACTTGGCCTTaGATACAAACGCCTGCCAGGCTCCATCTTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GGPLLSPWTTWP*IQTPARLHLQP Trigger: TGGCTGAAGATGGAGCCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCAGGGAGAGAGCAGTGGCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS CCA 72 bp | CCCTCAGAGCTTTGTGGAGGGCCACTGCTCTCTCCCTaGACAACTTGGCCTTGGATACAAACGCCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSELCGGPLLSP*TTWPWIQTPAR Trigger: CCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCAGGGAGAGAGCAGTGGCCCTCCACAAAGCTCTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | TGGAGGGCCACTGCTCTCTCCCTGGACAACTTGGCCTaGGATACAAACGCCTGCCAGGCTCCATCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRATALSLDNLA*DTNACQAPSSA Trigger: GGCTGAAGATGGAGCCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCAGGGAGAGAGCAGTGGCCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS CAA 90 bp | TCAGCCGACTCTGACGCAGACCCTTCGTACAGATGCTTTGACTCTTaGACAAGGCTGTCCACGTCACTCCAGAGGGCGGCACCTGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SADSDADPSYRCFDS*TRLSTSLQRAAPAV Trigger: CACCGCAGGTGCCGCCCTCTGGAGTGACGTGGACAGCCTTGTCAAAGAGTCAAAGCATCTGTACGAAGGGTCTGCGTCAGAGTCGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | GCTTTGTGGAGGGCCACTGCTCTCTCCCTGGACAACTaGGCCTTGGATACAAACGCCTGCCAGGCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: ALWRATALSLDN*ALDTNACQAPS Trigger: AGATGGAGCCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCAGGGAGAGAGCAGTGGCCCTCCACAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS CCA 72 bp | CTTTGTGGAGGGCCACTGCTCTCTCCCTGGACAACTTaGCCTTGGATACAAACGCCTGCCAGGCTCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: LCGGPLLSPWTT*PWIQTPARLHL Trigger: AAGATGGAGCCTGGCAGGCGTTTGTATCCAAGGCCAAGTTGTCCAGGGAGAGAGCAGTGGCCCTCCACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS GCA 72 bp | CGAGGGTTAGCTCTAACCAGCCTGAGGGCATTCATGTaGTGCTCAAGGGCTTCCAGGTCTCTGGTGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: RGLALTSLRAFM*CSRASRSLVMS Trigger: AGACATCACCAGAGACCTGGAAGCCCTTGAGCAGCACATGAATGCCCTCAGGCTGGTTAGAGCTAACCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS CAA 72 bp | TCTGACGCAGACCCTTCGTACAGATGCTTTGACTCTTaGACAAGGCTGTCCACGTCACTCCAGAGGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SDADPSYRCFDS*TRLSTSLQRAA Trigger: TGCCGCCCTCTGGAGTGACGTGGACAGCCTTGTCAAAGAGTCAAAGCATCTGTACGAAGGGTCTGCGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109775.4 ENSMUST00000230979.2 |
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| CDS TCA 72 bp | ATCCTAGCTACACTTGTGCCAGCCTCCCCCAGCACATaGGTGCCAGTCAGAGCAGCTTCAACTTCATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILATLVPASPST*VPVRAASTSSK Trigger: TTTGGATGAAGTTGAAGCTGCTCTGACTGGCACTCATGTGCTGGGGGAGGCTGGCACAAGTGTAGCTAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109775.4 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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| CDS CAA 90 bp | GCGAGGAAAGACTTTCAAAAACTTCTCCCTGCCTTTCAGACCTTTTaGAAGTCTGCCTCTGTCTGCTATGGCCAAGAGCGCTGTCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ARKDFQKLLPAFQTF*KSASVCYGQERCQF Trigger: GAACTGACAGCGCTCTTGGCCATAGCAGACAGAGGCAGACTTCAAAAAGGTCTGAAAGGCAGGGAGAAGTTTTTGAAAGTCTTTCCTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000109775.4 ENSMUST00000230377.2 ENSMUST00000230742.2 ENSMUST00000230979.2 |
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