Pregenerated sensors for APOL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056656Ensembl transcript IDs: ENSMUST00000070911.4, ENSMUST00000089450.5, ENSMUST00000229445.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTACAAGGCTGTGCTCTGCCCTTGGACTGAGCACACTGCCTCATaGGAAGGGGCTGTGGGTCTAGCAGTTAGGGTGGTTAGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SYKAVLCPWTEHTAS*EGAVGLAVRVVRRR Trigger: CCTCCTCCTAACCACCCTAACTGCTAGACCCACAGCCCCTTCCCATGAGGCAGTGTGCTCAGTCCAAGGGCAGAGCACAGCCTTGTAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 90 bp | GAGCAGAAGAACCTCTGTGCCTCCTACAAGGCTGTGCTCTGCCCTTaGACTGAGCACACTGCCTCATGGGAAGGGGCTGTGGGTCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: EQKNLCASYKAVLCP*TEHTASWEGAVGLA Trigger: TGCTAGACCCACAGCCCCTTCCCATGAGGCAGTGTGCTCAGTCCAAGGGCAGAGCACAGCCTTGTAGGAGGCACAGAGGTTCTTCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 90 bp | AGTGTCAATGGAATTCCACTGGTCCTCAAAGGCACCCTGGCCCCTTaGCAACTGCCGTGCCCACTCTGCTGTCACCTCCACCTGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: SVNGIPLVLKGTLAP*QLPCPLCCHLHLSP Trigger: TGGTGACAGGTGGAGGTGACAGCAGAGTGGGCACGGCAGTTGTCAAGGGGCCAGGGTGCCTTTGAGGACCAGTGGAATTCCATTGACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR GCA 90 bp | TGCTTATCTGTGAGCAGAAGAACCTCTGTGCCTCCTACAAGGCTGTaGTCTGCCCTTGGACTGAGCACACTGCCTCATGGGAAGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CLSVSRRTSVPPTRL*SALGLSTLPHGKGL Trigger: CAGCCCCTTCCCATGAGGCAGTGTGCTCAGTCCAAGGGCAGAGCACAGCCTTGTAGGAGGCACAGAGGTTCTTCTGCTCACAGATAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 90 bp | ATCAACCCTGTTGCTAACCTTCCTGGGTCCCCTGGTGCTTATCTGTaGGCAGAAGAACCTCTGTGCCTCCTACAAGGCTGTGCTCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: INPVANLPGSPGAYL*AEEPLCLLQGCALP Trigger: GGGCAGAGCACAGCCTTGTAGGAGGCACAGAGGTTCTTCTGCTCACAGATAAGCACCAGGGGACCCAGGAAGGTTAGCAACAGGGTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 90 bp | ACAACCTCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCTaGCCTTGGAGGGTACCTACACCCACATTCTCAGATACACACACA | + |
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Preference number: 1 (lower is better) Translates to: TTSCNSSSGRPDALF*PWRVPTPTFSDTHT Trigger: TGTGTGTGTATCTGAGAATGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGAGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 90 bp | CCCCCAACTCATGAGGAAGCTGTGTCTCTGAGAAGGTATGTCTCTTaGCCACAGGCTGGTTGCCCTCAGTACAGCACAAAGTCTCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: PPTHEEAVSLRRYVS*PQAGCPQYSTKSLD Trigger: GTCAAGAGACTTTGTGCTGTACTGAGGGCAACCAGCCTGTGGTCAAGAGACATACCTTCTCAGAGACACAGCTTCCTCATGAGTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 90 bp | TCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCTGGCCTTaGAGGGTACCTACACCCACATTCTCAGATACACACACACACATA | + |
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Preference number: 1 (lower is better) Translates to: SCNSSSGRPDALFWP*RVPTPTFSDTHTHI Trigger: TATGTGTGTGTGTGTATCTGAGAATGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 90 bp | TTCGGGCTCCCATTCTTTTCCCTTCACTCCCTTAGCTACCGGCACTaGTCTTACAATGCTCAGCTAGAGAAAATGTCGAACGCTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: FGLPFFSLHSLSYRH*SYNAQLEKMSNAGW Trigger: CCAGCCAGCGTTCGACATTTTCTCTAGCTGAGCATTGTAAGATCAGTGCCGGTAGCTAAGGGAGTGAAGGGAAAAGAATGGGAGCCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 90 bp | AAGGTGGCTAAGCAGTTAAGAGTACTGGCTGTCCTGCTGAGGATATaGGTTCAATTCCCAGTATCTACATCAAGCAGTTCACAACCTCCT | + |
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Preference number: 1 (lower is better) Translates to: KVAKQLRVLAVLLRI*VQFPVSTSSSSQPP Trigger: AGGAGGTTGTGAACTGCTTGATGTAGATACTGGGAATTGAACTCATATCCTCAGCAGGACAGCCAGTACTCTTAACTGCTTAGCCACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | CCACTCTGCTGTCACCTCCACCTGTCACCACCACCACGGTCATCCGAGGAAGTCGCCCTCTTCTGGCCTTaGAGGGTACCTACACCCACA | + |
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Preference number: 2 (lower is better) Translates to: PLCCHLHLSPPPRSSEEVALFWP*RVPTPT Trigger: TGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGC...GACTTCCTCGGATGACCGTGGTGGTGGTGACAGGTGGAGGTGACAGCAGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CAA 90 bp | GAGTGTCAATGGAATTCCACTGGTCCTCAAAGGCACCCTGGCCCCTaGACAACTGCCGTGCCCACTCTGCTGTCACCTCCACCTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: ECQWNSTGPQRHPGP*TTAVPTLLSPPPVT Trigger: GGTGACAGGTGGAGGTGACAGCAGAGTGGGCACGGCAGTTGTCAAGGGGCCAGGGTGCCTTTGAGGACCAGTGGAATTCCATTGACACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR TCA 90 bp | CCACTCTGCTGTCACCTCCACCTGTCACCACCACCACGGTCATCCGAGGAAGTCTCTTTACTCCAAAACTaGCTGTTCCCTCCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PLCCHLHLSPPPRSSEEVSLLQN*LFPPSP Trigger: GGGGCTGGGAGGGAACAGTCAGTTTTGGAGTAAAGA...GACTTCCTCGGATGACCGTGGTGGTGGTGACAGGTGGAGGTGACAGCAGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | TCCACTGGTCCTCAAAGGCACCCTGGCCCCTTGACAACTGCCGTGCCCACTCTGCCAGGATTCTTCCTCTaGCTTTCTCCCATTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: STGPQRHPGPLTTAVPTLPGFFL*LSPIPS Trigger: ACTGGGAATGGGAGAAAGCCAGAGGAAGAATCCTGG...CAGAGTGGGCACGGCAGTTGTCAAGGGGCCAGGGTGCCTTTGAGGACCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGCCCCGTCTTCTGCACTaGTCTGGGGGAGGAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: FWADNRLYIPSFEGSTLLPRLLH*SGGGSM Trigger: CATGCTTCCTCCCCCAGAGCAGTGCAGAAGACGGGG...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR TCA 90 bp | ACGGTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGTACTGGCTGTCCTGCTaGGGATATGAGTTCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: TVIRGSHSGSSTSRILPLYWLSC*GYEFNS Trigger: GGAATTGAACTCATATCCTCAGCAGGACAGCCAGTA...CAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCGGATGCTCTCCTATCTCACATCCTGAAACGTGCTCTAACGTGTTGTTTTCTTTACTCCAAAACTaGCTGTTCCCTCCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EGGCSPISHPETCSNVLFSLLQN*LFPPSP Trigger: GGGGCTGGGAGGGAACAGTCAGTTTTGGAGTAAAGA...AAACAACACGTTAGAGCACGTTTCAGGATGTGAGATAGGAGAGCATCCGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CAA 90 bp | GGCGGATGCTCTCCTATCTCACATCCTGAAACGTGCTCTAACGTGTaGTTTTCCTTACCTATGACTTTGGGACCTTCACTCTGGGATGCC | + |
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Preference number: 2 (lower is better) Translates to: GGCSPISHPETCSNV*FSLPMTLGPSLWDA Trigger: GGCATCCCAGAGTGAAGGTCCCAAAGTCATAGGTAAGGAAAACAACACGTTAGAGCACGTTTCAGGATGTGAGATAGGAGAGCATCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | ATTAACCATGTCTGCTCCCAGTCTTCTGGGCAGATAACAGGCTATACATCCCTTCCTGATGCCCTCTTCTaGCCTTGGAGGGTACCTACA | + |
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Preference number: 2 (lower is better) Translates to: INHVCSQSSGQITGYTSLPDALF*PWRVPT Trigger: TGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGG...AAGGGATGTATAGCCTGTTATCTGCCCAGAAGACTGGGAGCAGACATGGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | CCATCCCTAAATCAATCTCCACCCCAGCACACCCTAGAGAGTGTCAATGGAATTCCGAGGAAGTCACAGTaGCTCTTCCACATCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: PSLNQSPPQHTLESVNGIPRKSQ*LFHIQD Trigger: ATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGG...AATTCCATTGACACTCTCTAGGGTGTGCTGGGGTGGAGATTGATTTAGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | ATTAACCATGTCTGCTCCCAGTCTTCTGGGCAGATAACAGGCTATACATCCCTTCCTTCCTGGGTCCCCTaGTGCTTATCTGTGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: INHVCSQSSGQITGYTSLPSWVP*CLSVSR Trigger: TCTGCTCACAGATAAGCACCAGGGGACCCAGGAAGG...AAGGGATGTATAGCCTGTTATCTGCCCAGAAGACTGGGAGCAGACATGGTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR GCA 90 bp | CAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTACTCCAAAACTGACTCCCCGTCTTCTGCACTaGTCTGGGGGAGGAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: QTQLSLFKPPKLFTPKLTPRLLH*SGGGSM Trigger: CATGCTTCCTCCCCCAGAGCAGTGCAGAAGACGGGG...AGTCAGTTTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCTCAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTACTCCAAAGCCCTCTTCTGGCCTTaGAGGGTACCTACACCCACA | + |
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Preference number: 2 (lower is better) Translates to: ACSDTALFIQTSKALYSKALFWP*RVPTPT Trigger: TGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGC...TTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTGAGCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR GCA 90 bp | GTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGGCTGCACTGATCTTACAATaGTCAGCTAGAGAAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: VIRGSHSGSSTSRILPLAALILQ*SARENV Trigger: GACATTTTCTCTAGCTGAGCATTGTAAGATCAGTGC...AGCCAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGTCAATGGAATTCCACTaGTCCTCAAAGGCACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: FWADNRLYIPSFEGSTLLSMEFH*SSKAPW Trigger: CCAGGGTGCCTTTGAGGACCAGTGGAATTCCATTGA...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTGAGCACACTGCCTCATaGGAAGGGGCTGTGGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLEHTAS*EGAVGL Trigger: TAGACCCACAGCCCCTTCCCATGAGGCAGTGTGCTC...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGAGGAAGCTGTGTCTCTaGGAAGGTATGTCTCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FWADNRLYIPSFEGSTLLRKLCL*EGMSLD Trigger: GTCAAGAGACATACCTTCTCAGAGACACAGCTTCCT...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCTTGCTTGCTCAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTCCTGATGCCCTCTTCTaGCCTTGGAGGGTACCTACA | + |
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Preference number: 2 (lower is better) Translates to: FSLLAQTQLSLFKPPKLFPDALF*PWRVPT Trigger: TGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGG...AAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTGAGCAAGCAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCTTGCTTGCTCAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTCTCTCTAGTCCCCTCTaGTCTCTTGTTTCGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: FSLLAQTQLSLFKPPKLFLSSPL*SLVSGS Trigger: GGAGCCCGAAACAAGAGACCAGAGGGGACTAGAGAG...AAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTGAGCAAGCAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTCCTTCCTGGGTCCCCTaGTGCTTATCTGTGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLPSWVP*CLSVSR Trigger: TCTGCTCACAGATAAGCACCAGGGGACCCAGGAAGG...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR GCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTGCAGAAGAACCTCTGTaGCTCCTACAAGGCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLAEEPL*LLQGCA Trigger: AGCACAGCCTTGTAGGAGGCACAGAGGTTCTTCTGC...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CCA 90 bp | CATATTGAAGCACGCCGCAAGCTGGTGAACACTTTCGTGGTGATAATTAACTCACCTAGAGAGTGTCAATaGAATTCCACTGGTCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HIEARRKLVNTFVVIINSPRECQ*NSTGPQ Trigger: TTGAGGACCAGTGGAATTCCATTGACACTCTCTAGG...TGAGTTAATTATCACCACGAAAGTGTTCACCAGCTTGCGGCGTGCTTCAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR TCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTTACTGGCTGTCCTGCTaGGGATATGAGTTCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLYWLSC*GYEFNS Trigger: GGAATTGAACTCATATCCTCAGCAGGACAGCCAGTA...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR GCA 90 bp | GCTTGCTCAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTACTCCAAAGCACTGATCTTACAATaGTCAGCTAGAGAAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: ACSDTALFIQTSKALYSKALILQ*SARENV Trigger: GACATTTTCTCTAGCTGAGCATTGTAAGATCAGTGC...TTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTGAGCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 72 bp | GGAATTCCACTGGTCCTCAAAGGCACCCTGGCCCCTTaGCAACTGCCGTGCCCACTCTGCTGTCACCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: GIPLVLKGTLAP*QLPCPLCCHLH Trigger: GTGGAGGTGACAGCAGAGTGGGCACGGCAGTTGTCAAGGGGCCAGGGTGCCTTTGAGGACCAGTGGAATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 72 bp | CTGTGCCTCCTACAAGGCTGTGCTCTGCCCTTGGACTaGGCACACTGCCTCATGGGAAGGGGCTGTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LCLLQGCALPLD*AHCLMGRGCGS Trigger: AGACCCACAGCCCCTTCCCATGAGGCAGTGTGCTCAGTCCAAGGGCAGAGCACAGCCTTGTAGGAGGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR GCA 72 bp | GTGAGCAGAAGAACCTCTGTGCCTCCTACAAGGCTGTaGTCTGCCCTTGGACTGAGCACACTGCCTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: VSRRTSVPPTRL*SALGLSTLPHG Trigger: CCCATGAGGCAGTGTGCTCAGTCCAAGGGCAGAGCACAGCCTTGTAGGAGGCACAGAGGTTCTTCTGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 72 bp | GTGTCAATGGAATTCCACTGGTCCTCAAAGGCACCCTaGCCCCTTGACAACTGCCGTGCCCACTCTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VSMEFHWSSKAP*PLDNCRAHSAV Trigger: GACAGCAGAGTGGGCACGGCAGTTGTCAAGGGGCCAGGGTGCCTTTGAGGACCAGTGGAATTCCATTGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CAA 90 bp | GTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGGCTTGCCCTCTTCTGGCCTaGGAGGGTACCTACACCCAC | + |
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Preference number: 3 (lower is better) Translates to: VIRGSHSGSSTSRILPLACPLLA*EGTYTH Trigger: GTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGCA...AGCCAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 72 bp | ACAGGCTGGTTGCCCTCAGTACAGCACAAAGTCTCTTaGCCTGTCAGTCCAATCTGGGCCACTCCCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: TGWLPSVQHKVS*PVSPIWATPHP Trigger: GGGATGGGGAGTGGCCCAGATTGGACTGACAGGTCAAGAGACTTTGTGCTGTACTGAGGGCAACCAGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 72 bp | TCAATCTCCACCCCAGCACACCCTAGAGAGTGTCAATaGAATTCCACTGGTCCTCAAAGGCACCCTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: SISTPAHPRECQ*NSTGPQRHPGP Trigger: GGGGCCAGGGTGCCTTTGAGGACCAGTGGAATTCCATTGACACTCTCTAGGGTGTGCTGGGGTGGAGATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR-3UTR CAA 90 bp | ACGGTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGGTCCCCTCTGGTCTCTaGTTTCGGGCTCCCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: TVIRGSHSGSSTSRILPLVPSGL*FRAPIL Trigger: AAGAATGGGAGCCCGAAACAAGAGACCAGAGGGGAC...CAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 72 bp | TGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCTaGCCTTGGAGGGTACCTACACCCACATTCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: CNSSSGRPDALF*PWRVPTPTFSD Trigger: ATCTGAGAATGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGGTCTCCCAGAGCTGGAGTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR CCA 72 bp | TGTCACCACCACCACGGTCATCCGAGGAAGTCACAGTaGCTCTTCCACATCCAGGATTCTTCCTCTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: CHHHHGHPRKSQ*LFHIQDSSSGF Trigger: AAAGCCAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGACCGTGGTGGTGGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| 3UTR TCA 72 bp | CATGAGGAAGCTGTGTCTCTGAGAAGGTATGTCTCTTaGCCACAGGCTGGTTGCCCTCAGTACAGCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HEEAVSLRRYVS*PQAGCPQYSTK Trigger: CTTTGTGCTGTACTGAGGGCAACCAGCCTGTGGTCAAGAGACATACCTTCTCAGAGACACAGCTTCCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR TCA 72 bp | CTTTATTCAAACCTCCAAAGCTCTTTACTCCAAAACTaGCTGTTCCCTCCCAGCCCCGCACTCTCTAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LYSNLQSSLLQN*LFPPSPALSSP Trigger: GGGACTAGAGAGTGCGGGGCTGGGAGGGAACAGTCAGTTTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTACTCCAAAACTGACTGTCCCCTCTGGTCTCTaGTTTCGGGCTCCCATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QTQLSLFKPPKLFTPKLTVPSGL*FRAPIL Trigger: AAGAATGGGAGCCCGAAACAAGAGACCAGAGGGGAC...AGTCAGTTTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR TCA 72 bp | CCATTCTTTTCCCTTCACTCCCTTAGCTACCGGCACTaGTCTTACAATGCTCAGCTAGAGAAAATGTCGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PFFSLHSLSYRH*SYNAQLEKMSN Trigger: GTTCGACATTTTCTCTAGCTGAGCATTGTAAGATCAGTGCCGGTAGCTAAGGGAGTGAAGGGAAAAGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTACAGCACAAAGTCTCTaGACCTGTCAGTCCAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLTAQSL*TCQSNL Trigger: CAGATTGGACTGACAGGTCAAGAGACTTTGTGCTGT...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR TCA 72 bp | AAGCAGTTAAGAGTACTGGCTGTCCTGCTGAGGATATaGGTTCAATTCCCAGTATCTACATCAAGCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KQLRVLAVLLRI*VQFPVSTSSSS Trigger: TGAACTGCTTGATGTAGATACTGGGAATTGAACTCATATCCTCAGCAGGACAGCCAGTACTCTTAACTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGCCCCGCACTCTCTAGTCCCCTCTGGTCTCTTGTTTCGGGCTCCCATTCCTGCAGGTCACGTTaGAGCCTTTCCTGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPALSSPLWSLVSGSHSCRSR*SLSWSS Trigger: GGAAGACCAGGAAAGGCTCCAACGTGACCTGCAGGA...ATGGGAGCCCGAAACAAGAGACCAGAGGGGACTAGAGAGTGCGGGGCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR CAA 72 bp | TGGAATTCCACTGGTCCTCAAAGGCACCCTGGCCCCTaGACAACTGCCGTGCCCACTCTGCTGTCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WNSTGPQRHPGP*TTAVPTLLSPP Trigger: TGGAGGTGACAGCAGAGTGGGCACGGCAGTTGTCAAGGGGCCAGGGTGCCTTTGAGGACCAGTGGAATTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGCCCCGCACTCTCTAGTCCCCTCTGGTCTCTTGTTTCGGGCTCCCATAACGAGGGACACACCTaGGGTGGCTATACCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPSPALSSPLWSLVSGSHNEGHT*GGYTHD Trigger: ATCATGGGTATAGCCACCGCAGGTGTGTCCCTCGTT...ATGGGAGCCCGAAACAAGAGACCAGAGGGGACTAGAGAGTGCGGGGCTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGCCCCGCACTCTCTAGTCCCCTCTGGTCTCTTGTTTCGGGCTCCCATCCACAAGCTTGGAGATaGTACAGTCCCTGTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSPALSSPLWSLVSGSHPQAWR*YSPCAP Trigger: AGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGG...ATGGGAGCCCGAAACAAGAGACCAGAGGGGACTAGAGAGTGCGGGGCTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | ATCAAGCAGTTCACAACCTCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCAGTCACAGCCGCTGCTaGTCCCAGGCCCATCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKQFTTSCNSSSGRPDALSHSRC*SQAHPC Trigger: ACAGGGATGGGCCTGGGAGCAGCAGCGGCTGTGACT...GAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGAGGTTGTGAACTGCTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | CCACTCTGCTGTCACCTCCACCTGTCACCACCACCACGGTCATCCGAGGAAGTCCGTTGGAGCCTTTCCTaGTCTTCCACAGCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLCCHLHLSPPPRSSEEVRWSLS*SSTARF Trigger: AAACCTGGCTGTGGAAGACCAGGAAAGGCTCCAACG...GACTTCCTCGGATGACCGTGGTGGTGGTGACAGGTGGAGGTGACAGCAGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | TTGACCTGTCAGTCCAATCTGGGCCACTCCCCATCCCTAAATCAATCTCCACCCTCACGGGTACCAGAGTaGGGCCAAGGAGGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTCQSNLGHSPSLNQSPPSRVPE*GQGGSG Trigger: TCCTGACCCTCCTTGGCCTCACTCTGGTACCCGTGA...GGGTGGAGATTGATTTAGGGATGGGGAGTGGCCCAGATTGGACTGACAGGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | ACGGTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGGGATGCCAGACACAGTaGTGGTGGAGCCGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TVIRGSHSGSSTSRILPLGCQTQ*WWSRPQ Trigger: TTGTGGCCGGCTCCACCAGCACTGTGTCTGGCATCC...CAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR CAA 72 bp | CACAGGCTGGTTGCCCTCAGTACAGCACAAAGTCTCTaGACCTGTCAGTCCAATCTGGGCCACTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLVALSTAQSL*TCQSNLGHSPS Trigger: GGATGGGGAGTGGCCCAGATTGGACTGACAGGTCAAGAGACTTTGTGCTGTACTGAGGGCAACCAGCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | GACCTGATGCCCTCTTCTGGCCTTGGAGGGTACCTACACCCACATTCTCAGATACAGCGGCTTCCTCAATaGAGGTTCTGTCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLMPSSGLGGYLHPHSQIQRLPQ*RFCLLG Trigger: CCCCAGGAGACAGAACCTTCATTGAGGAAGCCGCTG...TATCTGAGAATGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | TCTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACCAGCCAGGTTTGCTGTaGGTGCATGGAGGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHKNASVSRSRTPPRLLHQPGLL*VHGGRR Trigger: GCGACGCCCTCCATGCACTCACAGCAAACCTGGCTG...GTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | GTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGGCTCCAAGAGTACCAGACTaGTCCCAGCTGTCACGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VIRGSHSGSSTSRILPLAPRVPD*SQLSRV Trigger: TACCCGTGACAGCTGGGATCAGTCTGGTACTCTTGG...AGCCAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | ATCAAGCAGTTCACAACCTCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCCACAGCCAGGTTTaGTGTGAGTGCATGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKQFTTSCNSSSGRPDALFHSQV*CECMEG Trigger: GCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAA...GAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGAGGTTGTGAACTGCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | ACGGTCATCCGAGGAAGTCACAGTGGCTCTTCCACATCCAGGATTCTTCCTCTGTCTTCACTTTGGCCATaGCGGTTGACACCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVIRGSHSGSSTSRILPLSSLWP*RLTPGG Trigger: GCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGA...CAGAGGAAGAATCCTGGATGTGGAAGAGCCACTGTGACTTCCTCGGATGACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | ATTAACCATGTCTGCTCCCAGTCTTCTGGGCAGATAACAGGCTATACATCCCTTCAGCCAGGTTTGCTGTaGGTGCATGGAGGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: INHVCSQSSGQITGYTSLQPGLL*VHGGRR Trigger: GCGACGCCCTCCATGCACTCACAGCAAACCTGGCTG...AAGGGATGTATAGCCTGTTATCTGCCCAGAAGACTGGGAGCAGACATGGTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | ACAACCTCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCTGGCCTTGGATGGTACAGTCCCTGTaGACCTTGTCAACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSCNSSSGRPDALFWPWMVQSL*TLSTLS Trigger: AGACAAGGTTGACAAGGTGCACAGGGACTGTACCAT...CCAAGGCCAGAAGAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGAGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGAGTCACAGCCGCTGCTaGTCCCAGGCCCATCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FWADNRLYIPSFEGSTLLSHSRC*SQAHPC Trigger: ACAGGGATGGGCCTGGGAGCAGCAGCGGCTGTGACT...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | CCACTCTGCTGTCACCTCCACCTGTCACCACCACCACGGTCATCCGAGGAAGTCCAGACTTTGCTTTTGTaGCCTTGTGCAAATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCCHLHLSPPPRSSEEVQTLLL*PCANSW Trigger: CCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTG...GACTTCCTCGGATGACCGTGGTGGTGGTGACAGGTGGAGGTGACAGCAGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | GAGGGCGGATGCTCTCCTATCTCACATCCTGAAACGTGCTCTAACGTGTTGTTTCCAAGAGTACCAGACTaGTCCCAGCTGTCACGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGGCSPISHPETCSNVLFPRVPD*SQLSRV Trigger: TACCCGTGACAGCTGGGATCAGTCTGGTACTCTTGG...AAACAACACGTTAGAGCACGTTTCAGGATGTGAGATAGGAGAGCATCCGCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | CTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACTTCTTCACTTTGGCCATaGCGGTTGACACCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTKMLQSLDPEHLPVFCTSSLWP*RLTPGG Trigger: GCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGA...AGTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | ACAACCTCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCTGGCCTTGGCAGACTTTGCTTTTGTaGCCTTGTGCAAATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSCNSSSGRPDALFWPWQTLLL*PCANSW Trigger: CCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTG...CCAAGGCCAGAAGAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGAGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | CTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACTAGCCGGCCACAAGCTTaGAGATGGTACAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTKMLQSLDPEHLPVFCTSRPQA*RWYSPC Trigger: ACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCT...AGTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | TCTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACAACGAGGGACACACCTaGGGTGGCTATACCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHKNASVSRSRTPPRLLHNEGHT*GGYTHD Trigger: ATCATGGGTATAGCCACCGCAGGTGTGTCCCTCGTT...GTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR CAA 72 bp | AGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTaGCTAACCTTCCTGGGTCCCCTGGTGCTTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYIPSFEGSTL*LTFLGPLVLIC Trigger: ACAGATAAGCACCAGGGGACCCAGGAAGGTTAGCAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | ATTAACCATGTCTGCTCCCAGTCTTCTGGGCAGATAACAGGCTATACATCCCTTCGTTGGAGCCTTTCCTaGTCTTCCACAGCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INHVCSQSSGQITGYTSLRWSLS*SSTARF Trigger: AAACCTGGCTGTGGAAGACCAGGAAAGGCTCCAACG...AAGGGATGTATAGCCTGTTATCTGCCCAGAAGACTGGGAGCAGACATGGTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTCAGCGGCTTCCTCAATaGAGGTTCTGTCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLQRLPQ*RFCLLG Trigger: CCCCAGGAGACAGAACCTTCATTGAGGAAGCCGCTG...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGCTTCATACATCTGGATaGGCGCCTCCAGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FWADNRLYIPSFEGSTLLLHTSG*APPVSP Trigger: AGGAGAAACTGGAGGCGCTCATCCAGATGTATGAAG...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | CTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACTATGGTACAGTCCCTGTaGACCTTGTCAACCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTKMLQSLDPEHLPVFCTMVQSL*TLSTLS Trigger: AGACAAGGTTGACAAGGTGCACAGGGACTGTACCAT...AGTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTGCTTGCTCAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTTTCCACAGCCAGGTTTaGTGTGAGTGCATGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLAQTQLSLFKPPKLFFHSQV*CECMEG Trigger: GCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAA...AAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTGAGCAAGCAAGGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | CAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTACTCCAAAACTGACTTCCTGCAGGTCACGTTaGAGCCTTTCCTGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTQLSLFKPPKLFTPKLTSCRSR*SLSWSS Trigger: GGAAGACCAGGAAAGGCTCCAACGTGACCTGCAGGA...AGTCAGTTTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTAGCCGGCCACAAGCTTaGAGATGGTACAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLSRPQA*RWYSPC Trigger: ACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCT...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR TCA 90 bp | ACACAAAATAGCACAAAGGTCACCAAACTATTAACCATGTCTGCTCCCAGTCTTCTTCATACATCTGGATaGGCGCCTCCAGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQNSTKVTKLLTMSAPSLLHTSG*APPVSP Trigger: AGGAGAAACTGGAGGCGCTCATCCAGATGTATGAAG...AAGACTGGGAGCAGACATGGTTAATAGTTTGGTGACCTTTGTGCTATTTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| 3UTR CAA 72 bp | TCTCCTATCTCACATCCTGAAACGTGCTCTAACGTGTaGTTTTCCTTACCTATGACTTTGGGACCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SPISHPETCSNV*FSLPMTLGPSL Trigger: GAGTGAAGGTCCCAAAGTCATAGGTAAGGAAAACAACACGTTAGAGCACGTTTCAGGATGTGAGATAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | GTGCTGGTGGAGCCGGCCACAAGCTTGGAGATGGTACAGTCCCTGTaGACCTTGTCAACCTTGTCTGCCAGGGTGCGGAGCTTCCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLVEPATSLEMVQSL*TLSTLSARVRSFPM Trigger: CATCGGGAAGCTCCGCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCACCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 90 bp | GGATGCCAGACACAGTGCTGGTGGAGCCGGCCACAAGCTTGGAGATaGTACAGTCCCTGTGCACCTTGTCAACCTTGTCTGCCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCQTQCWWSRPQAWR*YSPCAPCQPCLPGC Trigger: GCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCACCAGCACTGTGTCTGGCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | TGTGTAGTCCACGATCCCAGAGGAGACACTAGTCACAGCCGCTGCTaGTCCCAGGCCCATCCCTGTTGCCAAGAGTACCAGACTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: CVVHDPRGDTSHSRC*SQAHPCCQEYQTDP Trigger: GGGATCAGTCTGGTACTCTTGGCAACAGGGATGGGCCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCTCTGGGATCGTGGACTACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 90 bp | GGGTCAGGATGCCAGACACAGTGCTGGTGGAGCCGGCCACAAGCTTaGAGATGGTACAGTCCCTGTGCACCTTGTCAACCTTGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGCQTQCWWSRPQA*RWYSPCAPCQPCLP Trigger: TGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCACCAGCACTGTGTCTGGCATCCTGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | CCACTCTGCTGTCACCTCCACCTGTCACCACCACCACGGTCATCCGAGGAAGTCGCTGCTAAGGCAGGGTaGGCTTTGGTGAGCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLCCHLHLSPPPRSSEEVAAKAG*ALVSLM Trigger: CATCAAGCTCACCAAAGCCAACCCTGCCTTAGCAGC...GACTTCCTCGGATGACCGTGGTGGTGGTGACAGGTGGAGGTGACAGCAGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS TCA 90 bp | GGTCACGTTGGAGCCTTTCCTGGTCTTCCACAGCCAGGTTTGCTGTaGGTGCATGGAGGGCGTCGCGTAAAGTGTCTGCATCAGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHVGAFPGLPQPGLL*VHGGRRVKCLHQLW Trigger: CCAGAGCTGATGCAGACACTTTACGCGACGCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAAGACCAGGAAAGGCTCCAACGTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 90 bp | AGGGTGCGGAGCTTCCCGATGTGTCCCTCCAGCTCCAGTTTCACCTaGGGAAACGCATCCATAAACCTCTCCATGTCCTGCAGGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: RVRSFPMCPSSSSFT*GNASINLSMSCRSR Trigger: ACGTGACCTGCAGGACATGGAGAGGTTTATGGATGCGTTTCCCCAGGTGAAACTGGAGCTGGAGGGACACATCGGGAAGCTCCGCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 90 bp | GCCAGGGCAGTGCCTTTAAAGGCCTTCTTCACGTGCTTACCACTTTaGGCAGAGGTGCTCCCCATGGCACTAGCTGCTAAGGCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARAVPLKAFFTCLPL*AEVLPMALAAKAGL Trigger: CAACCCTGCCTTAGCAGCTAGTGCCATGGGGAGCACCTCTGCCCAAAGTGGTAAGCACGTGAAGAAGGCCTTTAAAGGCACTGCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | ACTTGTGTAGTCCACGATCCCAGAGGAGACACTAGTCACAGCCGCTaGTGCTCCCAGGCCCATCCCTGTTGCCAAGAGTACCAGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TCVVHDPRGDTSHSR*CSQAHPCCQEYQTD Trigger: ATCAGTCTGGTACTCTTGGCAACAGGGATGGGCCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCTCTGGGATCGTGGACTACACAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 90 bp | TCCATAAACCTCTCCATGTCCTGCAGGTCACGTTGGAGCCTTTCCTaGTCTTCCACAGCCAGGTTTGCTGTGAGTGCATGGAGGGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SINLSMSCRSRWSLS*SSTARFAVSAWRAS Trigger: CGACGCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAAGACCAGGAAAGGCTCCAACGTGACCTGCAGGACATGGAGAGGTTTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | GACCTGATGCCCTCTTCTGGCCTTGGAGGGTACCTACACCCACATTCTCAGATACTTTGGCCATGCCGGTaGACACCAGGTGGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLMPSSGLGGYLHPHSQILWPCR*TPGGWL Trigger: AAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAG...TATCTGAGAATGTGGGTGTAGGTACCCTCCAAGGCCAGAAGAGGGCATCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 90 bp | TGGAGCCTTTCCTGGTCTTCCACAGCCAGGTTTGCTGTGAGTGCATaGAGGGCGTCGCGTAAAGTGTCTGCATCAGCTCTGGACAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSLSWSSTARFAVSA*RASRKVSASALDNS Trigger: TGAGTTGTCCAGAGCTGATGCAGACACTTTACGCGACGCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAAGACCAGGAAAGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | GTCCTGAATGAACCACAGCGTCTGCAACCATCTTCACTTTGGCCATaGCGGTTGACACCAGGTGGCTGGCTTCCGTTTTGGCTAATGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLNEPQRLQPSSLWP*RLTPGGWLPFWLMT Trigger: GGTCATTAGCCAAAACGGAAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGATGGTTGCAGACGCTGTGGTTCATTCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | CTTCTGCTTATTGCCAGGGCAGTGCCTTTAAAGGCCTTCTTCACGTaGTTACCACTTTGGGCAGAGGTGCTCCCCATGGCACTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLIARAVPLKAFFT*LPLWAEVLPMALAA Trigger: AGCAGCTAGTGCCATGGGGAGCACCTCTGCCCAAAGTGGTAAGCACGTGAAGAAGGCCTTTAAAGGCACTGCCCTGGCAATAAGCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | CACACCTGCGGTGGCTATACCCATGATCCGGGCTCTTCTGCTTATTaGCAGGGCAGTGCCTTTAAAGGCCTTCTTCACGTGCTTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: HTCGGYTHDPGSSAY*QGSAFKGLLHVLTT Trigger: AGTGGTAAGCACGTGAAGAAGGCCTTTAAAGGCACTGCCCTGGCAATAAGCAGAAGAGCCCGGATCATGGGTATAGCCACCGCAGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | ACAACCTCCTGTAACTCCAGCTCTGGGAGACCTGATGCCCTCTTCTGGCCTTGGCGGCAGACTTTGCTTTaGTGCCCTTGTGCAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TTSCNSSSGRPDALFWPWRQTLL*CPCANS Trigger: AGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCG...CCAAGGCCAGAAGAGGGCATCAGGTCTCCCAGAGCTGGAGTTACAGGAGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 90 bp | GCCTGCTGCCTCAACTCCTCGGCAGACTTTGCTTTTGTGCCCTTGTaGAAATTCTTGGACTGTTTCACAAGGCTGATCACATCCCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: ACCLNSSADFAFVPL*KFLDCFTRLITSPT Trigger: CGTTGGGGATGTGATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGCTTTGGCCATGCCGGTaGACACCAGGTGGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FWADNRLYIPSFEGSTLLLWPCR*TPGGWL Trigger: AAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAG...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS TCA 90 bp | TTGCTTTTGTGCCCTTGTGCAAATTCTTGGACTGTTTCACAAGGCTaGTCACATCCCCAACGAGGGACACACCTGCGGTGGCTATACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLCPCANSWTVSQG*SHPQRGTHLRWLYP Trigger: TGGGTATAGCCACCGCAGGTGTGTCCCTCGTTGGGGATGTGATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | TCTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACGCAACCATCTTCACTTaGGCCATGCCGGTTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SHKNASVSRSRTPPRLLHATIFT*AMPVDT Trigger: GGTGTCAACCGGCATGGCCAAAGTGAAGATGGTTGC...GTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | TTCTGGGCAGATAACAGGCTATACATCCCTTCCTTTGAAGGATCAACCCTGTTGCACGTGCTTACCACTTaGGGCAGAGGTGCTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FWADNRLYIPSFEGSTLLHVLTT*GRGAPH Trigger: ATGGGGAGCACCTCTGCCCAAAGTGGTAAGCACGTG...CAACAGGGTTGATCCTTCAAAGGAAGGGATGTATAGCCTGTTATCTGCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGTACTGGCTGTCCTGCTGAGGATATGAGTTCAATTCCCAGTATCTACATCCACGTGCTTACCACTTaGGGCAGAGGTGCTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KSTGCPAEDMSSIPSIYIHVLTT*GRGAPH Trigger: ATGGGGAGCACCTCTGCCCAAAGTGGTAAGCACGTG...GATGTAGATACTGGGAATTGAACTCATATCCTCAGCAGGACAGCCAGTACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | TCCCCATCCCTAAATCAATCTCCACCCCAGCACACCCTAGAGAGTGTCAATGGACCCTTGTGCAAATTCTaGGACTGTTTCACAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSLNQSPPQHTLESVNGPLCKF*DCFTRL Trigger: CAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGG...TCCATTGACACTCTCTAGGGTGTGCTGGGGTGGAGATTGATTTAGGGATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | TCTCACAAAAATGCTTCAGTCTCTAGATCCAGAACACCTCCCCGTCTTCTGCACTGGCTGGCTTCCGTTTaGGCTAATGACCTACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHKNASVSRSRTPPRLLHWLASV*ANDLLV Trigger: CACAAGTAGGTCATTAGCCAAAACGGAAGCCAGCCA...GTGCAGAAGACGGGGAGGTGTTCTGGATCTAGAGACTGAAGCATTTTTGTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGTACTGGCTGTCCTGCTGAGGATATGAGTTCAATTCCCAGTATCTACATCTGGCTGGCTTCCGTTTaGGCTAATGACCTACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSTGCPAEDMSSIPSIYIWLASV*ANDLLV Trigger: CACAAGTAGGTCATTAGCCAAAACGGAAGCCAGCCA...GATGTAGATACTGGGAATTGAACTCATATCCTCAGCAGGACAGCCAGTACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGCTCAGACACAGCTCTCTTTATTCAAACCTCCAAAGCTCTTTACTCCAAACGGCAGACTTTGCTTTaGTGCCCTTGTGCAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ACSDTALFIQTSKALYSKRQTLL*CPCANS Trigger: AGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCG...TTTGGAGTAAAGAGCTTTGGAGGTTTGAATAAAGAGAGCTGTGTCTGAGCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 90 bp | GTGGAGCCGGCCACAAGCTTGGAGATGGTACAGTCCCTGTGCACCTaGTCAACCTTGTCTGCCAGGGTGCGGAGCTTCCCGATGTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VEPATSLEMVQSLCT*STLSARVRSFPMCP Trigger: GGGACACATCGGGAAGCTCCGCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 72 bp | CTCCATCTTCGGTCAGCAGCAGCCTCAGGTCTTCCCTaGCCGATGTGTGCTGCAGGTACTCAGCGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHLRSAAASGLP*PMCAAGTQRLP Trigger: AGGAAGCCGCTGAGTACCTGCAGCACACATCGGGCAGGGAAGACCTGAGGCTGCTGCTGACCGAAGATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 ENSMUST00000229445.2 |
||
| CDS CAA 90 bp | GCCACAAGCTTGGAGATGGTACAGTCCCTGTGCACCTTGTCAACCTaGTCTGCCAGGGTGCGGAGCTTCCCGATGTGTCCCTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSLEMVQSLCTLST*SARVRSFPMCPSSS Trigger: GGAGCTGGAGGGACACATCGGGAAGCTCCGCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 72 bp | GATGGTACAGTCCCTGTGCACCTTGTCAACCTTGTCTaGCAGGGTGCGGAGCTTCCCGATGTGTCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DGTVPVHLVNLV*QGAELPDVSLQ Trigger: CTGGAGGGACACATCGGGAAGCTCCGCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 72 bp | GCCACAAGCTTGGAGATGGTACAGTCCCTGTGCACCTaGTCAACCTTGTCTGCCAGGGTGCGGAGCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ATSLEMVQSLCT*STLSARVRSFP Trigger: CGGGAAGCTCCGCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS TCA 72 bp | CCGATGTGTGCTGCAGGTACTCAGCGGCTTCCTCAATaGAGGTTCTGTCTCCTGGGGCATCCTCGCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PMCAAGTQRLPQ*RFCLLGHPRSL Trigger: CAGACTGCGAGGATGCCCCAGGAGACAGAACCTTCATTGAGGAAGCCGCTGAGTACCTGCAGCACACATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 ENSMUST00000229445.2 |
||
| CDS TCA 72 bp | GCCTTGAGCCTGCCTGCAAACCTTCATACATCTGGATaGGCGCCTCCAGTTTCTCCTCCAGCTCCCGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALSLPANLHTSG*APPVSPPAPEP Trigger: AGGCTCGGGAGCTGGAGGAGAAACTGGAGGCGCTCATCCAGATGTATGAAGGTTTGCAGGCAGGCTCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 72 bp | GTCAGCAGCAGCCTCAGGTCTTCCCTGCCCGATGTGTaGTGCAGGTACTCAGCGGCTTCCTCAATGAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSSSLRSSLPDV*CRYSAASSMKV Trigger: AACCTTCATTGAGGAAGCCGCTGAGTACCTGCAGCACACATCGGGCAGGGAAGACCTGAGGCTGCTGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 ENSMUST00000229445.2 |
||
| CDS CCA 72 bp | TGCCAGACACAGTGCTGGTGGAGCCGGCCACAAGCTTaGAGATGGTACAGTCCCTGTGCACCTTGTCAACCT | + |
|
Preference number: 6 (lower is better) Translates to: CQTQCWWSRPQA*RWYSPCAPCQP Trigger: AGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCACCAGCACTGTGTCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 72 bp | TTGGAGATGGTACAGTCCCTGTGCACCTTGTCAACCTaGTCTGCCAGGGTGCGGAGCTTCCCGATGTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LEMVQSLCTLST*SARVRSFPMCP Trigger: GGGACACATCGGGAAGCTCCGCACCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 72 bp | ATGCCAGACACAGTGCTGGTGGAGCCGGCCACAAGCTaGGAGATGGTACAGTCCCTGTGCACCTTGTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: MPDTVLVEPATS*EMVQSLCTLST Trigger: GGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCACCAGCACTGTGTCTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS TCA 72 bp | GGAGCCTTTCCTGGTCTTCCACAGCCAGGTTTGCTGTaGGTGCATGGAGGGCGTCGCGTAAAGTGTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GAFPGLPQPGLL*VHGGRRVKCLH Trigger: ATGCAGACACTTTACGCGACGCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAAGACCAGGAAAGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 ENSMUST00000229445.2 |
||
| CDS GCA 72 bp | GAACCACAGCGTCTGCAACCATCTTCACTTTGGCCATaGCGGTTGACACCAGGTGGCTGGCTTCCGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: EPQRLQPSSLWP*RLTPGGWLPFW Trigger: CCAAAACGGAAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGATGGTTGCAGACGCTGTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 72 bp | TCCTGGTCTTCCACAGCCAGGTTTGCTGTGAGTGCATaGAGGGCGTCGCGTAAAGTGTCTGCATCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWSSTARFAVSA*RASRKVSASAL Trigger: CAGAGCTGATGCAGACACTTTACGCGACGCCCTCCATGCACTCACAGCAAACCTGGCTGTGGAAGACCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 ENSMUST00000229445.2 |
||
| CDS CCA 72 bp | ACACAGTGCTGGTGGAGCCGGCCACAAGCTTGGAGATaGTACAGTCCCTGTGCACCTTGTCAACCTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TQCWWSRPQAWR*YSPCAPCQPCL Trigger: CAGACAAGGTTGACAAGGTGCACAGGGACTGTACCATCTCCAAGCTTGTGGCCGGCTCCACCAGCACTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 72 bp | CTGAATGAACCACAGCGTCTGCAACCATCTTCACTTTaGCCATGCCGGTTGACACCAGGTGGCTGGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LNEPQRLQPSSL*PCRLTPGGWLP Trigger: CGGAAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGATGGTTGCAGACGCTGTGGTTCATTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 72 bp | TACCGCCTTGAGCCTGCCTGCAAACCTTCATACATCTaGATGAGCGCCTCCAGTTTCTCCTCCAGCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: YRLEPACKPSYI*MSASSFSSSSR Trigger: TCGGGAGCTGGAGGAGAAACTGGAGGCGCTCATCCAGATGTATGAAGGTTTGCAGGCAGGCTCAAGGCGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 90 bp | CTGGGGAAACGCATCCATAAACCTCTCCATGTCCTGCAGGTCACGTaGGAGCCTTTCCTGGTCTTCCACAGCCAGGTTTGCTGTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGKRIHKPLHVLQVT*EPFLVFHSQVCCEC Trigger: GCACTCACAGCAAACCTGGCTGTGGAAGACCAGGAAAGGCTCCAACGTGACCTGCAGGACATGGAGAGGTTTATGGATGCGTTTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 72 bp | ATTGCCAGGGCAGTGCCTTTAAAGGCCTTCTTCACGTaGTTACCACTTTGGGCAGAGGTGCTCCCCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IARAVPLKAFFT*LPLWAEVLPMA Trigger: TGCCATGGGGAGCACCTCTGCCCAAAGTGGTAAGCACGTGAAGAAGGCCTTTAAAGGCACTGCCCTGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 72 bp | AGCTTCCCGATGTGTCCCTCCAGCTCCAGTTTCACCTaGGGAAACGCATCCATAAACCTCTCCATGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFPMCPSSSSFT*GNASINLSMSC Trigger: GCAGGACATGGAGAGGTTTATGGATGCGTTTCCCCAGGTGAAACTGGAGCTGGAGGGACACATCGGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 72 bp | CCATGCCGGTTGACACCAGGTGGCTGGCTTCCGTTTTaGCTAATGACCTACTTGTGTAGTCCACGATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PCRLTPGGWLPF*LMTYLCSPRSQ Trigger: CTGGGATCGTGGACTACACAAGTAGGTCATTAGCCAAAACGGAAGCCAGCCACCTGGTGTCAACCGGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 72 bp | CAGCGTCTGCAACCATCTTCACTTTGGCCATGCCGGTaGACACCAGGTGGCTGGCTTCCGTTTTGGCTAATG | + |
|
Preference number: 6 (lower is better) Translates to: QRLQPSSLWPCR*TPGGWLPFWLM Trigger: CATTAGCCAAAACGGAAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGATGGTTGCAGACGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 72 bp | GGTGGCTATACCCATGATCCGGGCTCTTCTGCTTATTaGCAGGGCAGTGCCTTTAAAGGCCTTCTTCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGYTHDPGSSAY*QGSAFKGLLHV Trigger: CACGTGAAGAAGGCCTTTAAAGGCACTGCCCTGGCAATAAGCAGAAGAGCCCGGATCATGGGTATAGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CCA 72 bp | GTGCCTTTAAAGGCCTTCTTCACGTGCTTACCACTTTaGGCAGAGGTGCTCCCCATGGCACTAGCTGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPLKAFFTCLPL*AEVLPMALAAK Trigger: CTTAGCAGCTAGTGCCATGGGGAGCACCTCTGCCCAAAGTGGTAAGCACGTGAAGAAGGCCTTTAAAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS CAA 72 bp | GCTCCCGAGCCTGCTGCCTCAACTCCTCGGCAGACTTaGCTTTTGTGCCCTTGTGCAAATTCTTGGACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: APEPAASTPRQT*LLCPCANSWTV Trigger: AACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
||
| CDS GCA 72 bp | CTCCCGAGCCTGCTGCCTCAACTCCTCGGCAGACTTTaGTTTTGTGCCCTTGTGCAAATTCTTGGACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPSLLPQLLGRL*FCALVQILGLF Trigger: AAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS CCA 72 bp | ACCATCTTCACTTTGGCCATGCCGGTTGACACCAGGTaGCTGGCTTCCGTTTTGGCTAATGACCTACTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TIFTLAMPVDTR*LASVLANDLLV Trigger: CACAAGTAGGTCATTAGCCAAAACGGAAGCCAGCCACCTGGTGTCAACCGGCATGGCCAAAGTGAAGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS CAA 90 bp | CGAGCCTGCTGCCTCAACTCCTCGGCAGACTTTGCTTTTGTGCCCTaGTGCAAATTCTTGGACTGTTTCACAAGGCTGATCACATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RACCLNSSADFAFVP*CKFLDCFTRLITSP Trigger: TGGGGATGTGATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS GCA 72 bp | CCTGCTGCCTCAACTCCTCGGCAGACTTTGCTTTTGTaGCCTTGTGCAAATTCTTGGACTGTTTCACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PAASTPRQTLLL*PCANSWTVSQG Trigger: GCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS CAA 90 bp | CTCAACTCCTCGGCAGACTTTGCTTTTGTGCCCTTGTGCAAATTCTaGGACTGTTTCACAAGGCTGATCACATCCCCAACGAGGGACACA | + |
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Preference number: 6 (lower is better) Translates to: LNSSADFAFVPLCKF*DCFTRLITSPTRDT Trigger: TGTGTCCCTCGTTGGGGATGTGATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS CAA 72 bp | TCGGCAGACTTTGCTTTTGTGCCCTTGTGCAAATTCTaGGACTGTTTCACAAGGCTGATCACATCCCCAACG | + |
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Preference number: 6 (lower is better) Translates to: SADFAFVPLCKF*DCFTRLITSPT Trigger: CGTTGGGGATGTGATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS CAA 72 bp | TGCCTCAACTCCTCGGCAGACTTTGCTTTTGTGCCCTaGTGCAAATTCTTGGACTGTTTCACAAGGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: CLNSSADFAFVP*CKFLDCFTRLI Trigger: GATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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| CDS GCA 72 bp | CTCAACTCCTCGGCAGACTTTGCTTTTGTGCCCTTGTaGAAATTCTTGGACTGTTTCACAAGGCTGATCACA | + |
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Preference number: 6 (lower is better) Translates to: LNSSADFAFVPL*KFLDCFTRLIT Trigger: TGTGATCAGCCTTGTGAAACAGTCCAAGAATTTGCACAAGGGCACAAAAGCAAAGTCTGCCGAGGAGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070911.4 ENSMUST00000089450.5 |
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