RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APOL7C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044309

Ensembl transcript IDs: ENSMUST00000062562.7, ENSMUST00000230863.2

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGCTGGGAGCAGTGCAGTGGGCAAAGCTTAGGAGCAGCCATGTaGCTTAGTCAGGACTTGGATGTGCTCCCCAGCTTGGGAGCTTGG +
Preference number: 1 (lower is better)
Translates to: LSWEQCSGQSLGAAM*LSQDLDVLPSLGAW
Trigger: CCAAGCTCCCAAGCTGGGGAGCACATCCAAGTCCTGACTAAGCCACATGGCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR GCA 90 bp TCTGGCTTCCTGTATCTTAATGTGTCCTCTCCCTTTAGCAGGCACTaGTGTGAAGGGGTAAGTCAGAGGCTCCCATGTGTTCATGGCTCT +
Preference number: 1 (lower is better)
Translates to: SGFLYLNVSSPFSRH*CEGVSQRLPCVHGS
Trigger: AGAGCCATGAACACATGGGAGCCTCTGACTTACCCCTTCACAGCAGTGCCTGCTAAAGGGAGAGGACACATTAAGATACAGGAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CCA 90 bp ATGTGGCTTAGTCAGGACTTGGATGTGCTCCCCAGCTTGGGAGCTTaGCTCTTAATTGGGAAGTTGATGGATCTAAGAGCTGGAGTCTGG +
Preference number: 1 (lower is better)
Translates to: MWLSQDLDVLPSLGA*LLIGKLMDLRAGVW
Trigger: CCAGACTCCAGCTCTTAGATCCATCAACTTCCCAATTAAGAGCCAAGCTCCCAAGCTGGGGAGCACATCCAAGTCCTGACTAAGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CCA 90 bp TCAGGACTTGGATGTGCTCCCCAGCTTGGGAGCTTGGCTCTTAATTaGGAAGTTGATGGATCTAAGAGCTGGAGTCTGGTAAGTGGTCAT +
Preference number: 1 (lower is better)
Translates to: SGLGCAPQLGSLALN*EVDGSKSWSLVSGH
Trigger: ATGACCACTTACCAGACTCCAGCTCTTAGATCCATCAACTTCCCAATTAAGAGCCAAGCTCCCAAGCTGGGGAGCACATCCAAGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CAA 90 bp GGAGCAGCCATGTGGCTTAGTCAGGACTTGGATGTGCTCCCCAGCTaGGGAGCTTGGCTCTTAATTGGGAAGTTGATGGATCTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: GAAMWLSQDLDVLPS*GAWLLIGKLMDLRA
Trigger: AGCTCTTAGATCCATCAACTTCCCAATTAAGAGCCAAGCTCCCAAGCTGGGGAGCACATCCAAGTCCTGACTAAGCCACATGGCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR-3UTR TCA 90 bp GTAGCCCATCCTATTCATCTTGGCAGATCTCATCCAATTACAGCAGATTTTAGCAGGGAGAAGAGCTTGTaGCGACTGGACAGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: VAHPIHLGRSHPITADFSREKSL*RLDRQY
Trigger: ATACTGCCTGTCCAGTCGTCACAAGCTCTTCTCCCT...GCTAAAATCTGCTGTAATTGGATGAGATCTGCCAAGATGAATAGGATGGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR-3UTR TCA 90 bp GAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAAGAACAGGAAATGTGGATAAACACACAATaGGGCAGAAGAAGAAAAGAG +
Preference number: 2 (lower is better)
Translates to: EHFTNGTHVTTQNQEQEMWINTQ*GRRRKE
Trigger: CTCTTTTCTTCTTCTGCCTCATTGTGTGTTTATCCA...CATTTCCTGTTCTTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR-3UTR CCA 90 bp GTATTACCAGTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATAGCTTGGCTCTTAATTaGGAAGTTGATGGATCTAAG +
Preference number: 2 (lower is better)
Translates to: VLPVSFLSSLEHFTNGTHSLALN*EVDGSK
Trigger: CTTAGATCCATCAACTTCCCAATTAAGAGCCAAGCT...ATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACACTGGTAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CCA 72 bp GGATGTGCTCCCCAGCTTGGGAGCTTGGCTCTTAATTaGGAAGTTGATGGATCTAAGAGCTGGAGTCTGGTA +
Preference number: 3 (lower is better)
Translates to: GCAPQLGSLALN*EVDGSKSWSLV
Trigger: TACCAGACTCCAGCTCTTAGATCCATCAACTTCCCAATTAAGAGCCAAGCTCCCAAGCTGGGGAGCACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR GCA 72 bp CTGTATCTTAATGTGTCCTCTCCCTTTAGCAGGCACTaGTGTGAAGGGGTAAGTCAGAGGCTCCCATGTGTT +
Preference number: 3 (lower is better)
Translates to: LYLNVSSPFSRH*CEGVSQRLPCV
Trigger: AACACATGGGAGCCTCTGACTTACCCCTTCACAGCAGTGCCTGCTAAAGGGAGAGGACACATTAAGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR-3UTR CAA 90 bp GTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCGATGTGCTCCCCAGCTaGGGAGCTTGGCTCTTAATT +
Preference number: 3 (lower is better)
Translates to: VSFLSSLEHFTNGTHVTTDVLPS*GAWLLI
Trigger: AATTAAGAGCCAAGCTCCCAAGCTGGGGAGCACATC...GGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR-3UTR CAA 90 bp GAGCTTGTGACGACTGGACAGGCAGTATTACCAGTGTCCTTTCTTTCTAGTCTTCTCTTAATTGGGAAGTaGATGGATCTAAGAGCTGGA +
Preference number: 3 (lower is better)
Translates to: ELVTTGQAVLPVSFLSSLLLIGK*MDLRAG
Trigger: TCCAGCTCTTAGATCCATCAACTTCCCAATTAAGAG...AAGACTAGAAAGAAAGGACACTGGTAATACTGCCTGTCCAGTCGTCACAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CAA 72 bp GGCCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATaGACAGCTCAGTGGATGGTGAGGTTGGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLCATNHKAVGR*TAQWMVRLVSL
Trigger: GAGGCTCACCAACCTCACCATCCACTGAGCTGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp AAAAGAGGAGAAGGCCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACACCCCAAGCCAGTGGCTaGCAGTGCCAGACTGACTCC +
Preference number: 4 (lower is better)
Translates to: KRGEGLCATNHKAVGRLTPQASG*QCQTDS
Trigger: GGAGTCAGTCTGGCACTGTCAGCCACTGGCTTGGGG...TGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGGCCTTCTCCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CAA 72 bp CAAAGCTTAGGAGCAGCCATGTGGCTTAGTCAGGACTaGGATGTGCTCCCCAGCTTGGGAGCTTGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: QSLGAAMWLSQD*DVLPSLGAWLL
Trigger: TAAGAGCCAAGCTCCCAAGCTGGGGAGCACATCCAAGTCCTGACTAAGCCACATGGCTGCTCCTAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp AAAAGAGGAGAAGGCCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACAGAGCCACAGTGGGAATaGAGCGCTTTCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KRGEGLCATNHKAVGRLTEPQWE*SAFSLG
Trigger: CCCCAGAGAGAAAGCGCTTCATTCCCACTGTGGCTC...TGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGGCCTTCTCCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp GTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCGGGCGTGGAGCTTCCTaGTGCTCTCCTCAATCTCCA +
Preference number: 4 (lower is better)
Translates to: VSFLSSLEHFTNGTHVTTGRGAS*CSPQSP
Trigger: TGGAGATTGAGGAGAGCATCAGGAAGCTCCACGCCC...GGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp GTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCCTGACAGTGCCAGACTaGCTCCTGCTGTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: VSFLSSLEHFTNGTHVTTLTVPD*LLLSQV
Trigger: CACCTGTGACAGCAGGAGTCAGTCTGGCACTGTCAG...GGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp GTATTACCAGTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATACTAGTCACAGTGGCTaGTGCCCCCAGCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VLPVSFLSSLEHFTNGTHTSHSG*CPQPQA
Trigger: GGCTTGGGGCTGGGGGCAGCAGCCACTGTGACTAGT...ATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACACTGGTAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp GAGCTTGTGACGACTGGACAGGCAGTATTACCAGTGTCCTTTCTTTCTAGTCTTGAAACCTGTGGTGGCTaGACCCATGATTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: ELVTTGQAVLPVSFLSSLETCGG*THDSDS
Trigger: GGAGTCCGAATCATGGGTGCAGCCACCACAGGTTTC...AAGACTAGAAAGAAAGGACACTGGTAATACTGCCTGTCCAGTCGTCACAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp GAGCTTGTGACGACTGGACAGGCAGTATTACCAGTGTCCTTTCTTTCTAGTCTTGAGCCAGACCAAGGATaGTCAGGACTCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: ELVTTGQAVLPVSFLSSLEPDQG*SGLQTQ
Trigger: CTGTGTCTGGAGTCCTGACCATCCTTGGTCTGGCTC...AAGACTAGAAAGAAAGGACACTGGTAATACTGCCTGTCCAGTCGTCACAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
3UTR CAA 72 bp ATGTGGCTTAGTCAGGACTTGGATGTGCTCCCCAGCTaGGGAGCTTGGCTCTTAATTGGGAAGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: MWLSQDLDVLPS*GAWLLIGKLMD
Trigger: ATCCATCAACTTCCCAATTAAGAGCCAAGCTCCCAAGCTGGGGAGCACATCCAAGTCCTGACTAAGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp GAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAAGAACAGGAAATGAGTCTTCCACAAGGCTaGTCACATCCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: EHFTNGTHVTTQNQEQEMSLPQG*SHPAGG
Trigger: TCCTCCTGCTGGATGTGATCAGCCTTGTGGAAGACT...CATTTCCTGTTCTTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp CTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAATCCTGCTGTCACAGGTaGCAGAGCCAGACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LSSLEHFTNGTHVTTQNQSCCHR*QSQTKD
Trigger: ATCCTTGGTCTGGCTCTGGCACCTGTGACAGCAGGA...TTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp GTATTACCAGTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATTGCCAGACTGACTCCTaGTGTCACAGGTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLPVSFLSSLEHFTNGTHCQTDS*CHRCQS
Trigger: GCTCTGGCACCTGTGACAGCAGGAGTCAGTCTGGCA...ATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACACTGGTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp CTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAATTCCAAGCTTGCTGCTaGAGCTCTGCAGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSSLEHFTNGTHVTTQNQFQACC*SSAAVC
Trigger: ACAGACTGCTGCAGAGCTTCAGCAGCAAGCTTGGAA...TTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR TCA 90 bp TCTGGCTTCCTGTATCTTAATGTGTCCTCTCCCTTTAGCAGGCACTGCTGTGAATGTTGTGAACCTCTTTaGGCTCCTGTAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SGFLYLNVSSPFSRHCCECCEPL*APVTSA
Trigger: AGCTGAAGTTACAGGAGCTCAAAGAGGTTCACAACA...TTCACAGCAGTGCCTGCTAAAGGGAGAGGACACATTAAGATACAGGAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp GAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAAGAACAGGAAATGCAGCTTCCTCTTCCCTaGACAAATCAACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EHFTNGTHVTTQNQEQEMQLPLP*TNQLLP
Trigger: TGGCAGAAGTTGATTTGTCCAGGGAAGAGGAAGCTG...CATTTCCTGTTCTTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp TCTGGCTTCCTGTATCTTAATGTGTCCTCTCCCTTTAGCAGGCACTGCTGTGAATGCCACAGGTCATTTTaGATCTCCTCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SGFLYLNVSSPFSRHCCECHRSF*ISSSSS
Trigger: AGAAGATGAAGAGGAGATCCAAAATGACCTGTGGCA...TTCACAGCAGTGCCTGCTAAAGGGAGAGGACACATTAAGATACAGGAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp GTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCTGGTCATTGCCAGAGTaGTACCTCCAAAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VSFLSSLEHFTNGTHVTTWSLPE*YLQRLS
Trigger: AGAAAGCCTTTGGAGGTACCACTCTGGCAATGACCA...GGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp GAGCTTGTGACGACTGGACAGGCAGTATTACCAGTGTCCTTTCTTTCTAGTCTTGGACAAATCAACTTCTaGCACAAACTGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ELVTTGQAVLPVSFLSSLGQINF*HKLFPG
Trigger: ACCTGGAAACAGTTTGTGGCAGAAGTTGATTTGTCC...AAGACTAGAAAGAAAGGACACTGGTAATACTGCCTGTCCAGTCGTCACAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp GAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAAGAACAGGAAATGCTCTCGTTCTTGTCCTaGAGGTCAATTTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: EHFTNGTHVTTQNQEQEMLSFLS*RSIWSS
Trigger: TGAACTCCAAATTGACCTGCAGGACAAGAACGAGAG...CATTTCCTGTTCTTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp AAAAGAGGAGAAGGCCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACATCCTGCAGGTCAATTTaGAGTTCATCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KRGEGLCATNHKAVGRLTSCRSI*SSSSSS
Trigger: AGAAGATGAAGATGAACTCCAAATTGACCTGCAGGA...TGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGGCCTTCTCCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp GTAGCCCATCCTATTCATCTTGGCAGATCTCATCCAATTACAGCAGATTTTAGCTCATTGTGTCTTTGTTaGTTGGCACCAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VAHPIHLGRSHPITADFSSLCLC*LAPGSW
Trigger: CCAGGAACCTGGTGCCAACCAACAAAGACACAATGA...GCTAAAATCTGCTGTAATTGGATGAGATCTGCCAAGATGAATAGGATGGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp GTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATGTGACTACCAAGAACCTTTCCTTGTaGCACAGGTCATTTTGGATC +
Preference number: 4 (lower is better)
Translates to: VSFLSSLEHFTNGTHVTTKNLSL*HRSFWI
Trigger: GATCCAAAATGACCTGTGGCACAAGGAAAGGTTCTT...GGTAGTCACATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CCA 90 bp GTATTACCAGTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATCATCAGTATCAGCTATaGTCTCAGTCAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLPVSFLSSLEHFTNGTHHQYQL*SQSGLH
Trigger: GTGAAGCCCTGACTGAGACCATAGCTGATACTGATG...ATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACACTGGTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR GCA 90 bp AGCTTGGCTCTTAATTGGGAAGTTGATGGATCTAAGAGCTGGAGTCTGGTAAGTCCAAAACTTCTATTATaGCCTTCATTGTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLALNWEVDGSKSWSLVSPKLLL*PSLCLC
Trigger: ACAAAGACACAATGAAGGGCATAATAGAAGTTTTGG...ACTTACCAGACTCCAGCTCTTAGATCCATCAACTTCCCAATTAAGAGCCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS GCA 90 bp GCACTGCTGGAGCTGGCCACCACCCGTGAGATGGTGCAGTCCCTGTaGACCTTGTCAACCTTGTCTGCCAGGGCGTGGAGCTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: ALLELATTREMVQSL*TLSTLSARAWSFLM
Trigger: CATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGCCAGCTCCAGCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS TCA 90 bp GGTCAGGACTCCAGACACAGCACTGCTGGAGCTGGCCACCACCCGTaGGATGGTGCAGTCCCTGTGCACCTTGTCAACCTTGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GQDSRHSTAGAGHHP*DGAVPVHLVNLVCQ
Trigger: CTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGCCAGCTCCAGCAGTGCTGTGTCTGGAGTCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 90 bp CCAGACCAAGGATGGTCAGGACTCCAGACACAGCACTGCTGGAGCTaGCCACCACCCGTGAGATGGTGCAGTCCCTGTGCACCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: PDQGWSGLQTQHCWS*PPPVRWCSPCAPCQ
Trigger: TTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGCCAGCTCCAGCAGTGCTGTGTCTGGAGTCCTGACCATCCTTGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 90 bp ATGGTGCAGTCCCTGTGCACCTTGTCAACCTTGTCTGCCAGGGCGTaGAGCTTCCTGATGCTCTCCTCAATCTCCAGTTTCACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: MVQSLCTLSTLSARA*SFLMLSSISSFTQG
Trigger: TCCTTGGGTGAAACTGGAGATTGAGGAGAGCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS GCA 90 bp CACAAGGCTGATCACATCCAGCAGGAGGAAGAAACCTGTGGTGGCTaGACCCATGATTCGGACTCCTTTGGTCATTGCCAGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: HKADHIQQEEETCGG*THDSDSFGHCQSGT
Trigger: GGTACCACTCTGGCAATGACCAAAGGAGTCCGAATCATGGGTGCAGCCACCACAGGTTTCTTCCTCCTGCTGGATGTGATCAGCCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS TCA 90 bp CAGCTCCAGGTTCCAAGCTTGCTGCTGAAGCTCTGCAGCAGTCTGTaGCTTAGCACCCTCATGCAAATGCTTCGAGTCTTCCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: QLQVPSLLLKLCSSL*LSTLMQMLRVFHKA
Trigger: AGCCTTGTGGAAGACTCGAAGCATTTGCATGAGGGTGCTAAGTCACAGACTGCTGCAGAGCTTCAGCAGCAAGCTTGGAACCTGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CAA 90 bp AAAAGAGGAGAAGGCCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACACTCCAGGTTCCAAGCTaGCTGCTGAAGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KRGEGLCATNHKAVGRLTLQVPS*LLKLCS
Trigger: GCTGCAGAGCTTCAGCAGCAAGCTTGGAACCTGGAG...TGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGGCCTTCTCCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS GCA 90 bp CTGCAGGTCAATTTGGAGTTCATCTTCATCTTCTCCATCAGGATCTaGAAAGATCTCAGCAAGAGACTCTCGCAAGGCAGCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LQVNLEFIFIFSIRI*KDLSKRLSQGSFLF
Trigger: GAAGAGGAAGCTGCCTTGCGAGAGTCTCTTGCTGAGATCTTTGCAGATCCTGATGGAGAAGATGAAGATGAACTCCAAATTGACCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 90 bp CAAAGATCTCAGCAAGAGACTCTCGCAAGGCAGCTTCCTCTTCCCTaGACAAATCAACTTCTGCCACAAACTGTTTCCAGGTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QRSQQETLARQLPLP*TNQLLPQTVSRFPL
Trigger: AAGAGGAAACCTGGAAACAGTTTGTGGCAGAAGTTGATTTGTCCAGGGAAGAGGAAGCTGCCTTGCGAGAGTCTCTTGCTGAGATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062562.7
ENSMUST00000230863.2
CDS-3UTR CAA 90 bp GAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAAGAACAGGAAATGGGACTCCTTTGGTCATaGCCAGAGTGGTACCTCCAA +
Preference number: 5 (lower is better)
Translates to: EHFTNGTHVTTQNQEQEMGLLWS*PEWYLQ
Trigger: TTGGAGGTACCACTCTGGCAATGACCAAAGGAGTCC...CATTTCCTGTTCTTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CAA 90 bp AAAAGAGGAGAAGGCCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACAGTCCTGCAGGTCAATTaGGAGTTCATCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: KRGEGLCATNHKAVGRLTVLQVN*EFIFIF
Trigger: GAAGATGAAGATGAACTCCAAATTGACCTGCAGGAC...TGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGGCCTTCTCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CAA 90 bp GAGCATTTTACCAATGGCACCCATGTGACTACCCAAAACCAAGAACAGGAAATGTTGTGTCTTTGTTGGTaGGCACCAGGTTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: EHFTNGTHVTTQNQEQEMLCLCW*APGSWL
Trigger: AAGCCAGGAACCTGGTGCCAACCAACAAAGACACAA...CATTTCCTGTTCTTGGTTTTGGGTAGTCACATGGGTGCCATTGGTAAAATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CAA 90 bp GAGCTTGTGACGACTGGACAGGCAGTATTACCAGTGTCCTTTCTTTCTAGTCTTCTATTATGCCCTTCATaGTGTCTTTGTTGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: ELVTTGQAVLPVSFLSSLLLCPS*CLCWLA
Trigger: TGCCAACCAACAAAGACACAATGAAGGGCATAATAG...AAGACTAGAAAGAAAGGACACTGGTAATACTGCCTGTCCAGTCGTCACAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS-3UTR CAA 90 bp GTATTACCAGTGTCCTTTCTTTCTAGTCTTGAGCATTTTACCAATGGCACCCATTTCATTGTGTCTTTGTaGGTTGGCACCAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VLPVSFLSSLEHFTNGTHFIVSL*VGTRFL
Trigger: CAGGAACCTGGTGCCAACCAACAAAGACACAATGAA...ATGGGTGCCATTGGTAAAATGCTCAAGACTAGAAAGAAAGGACACTGGTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 90 bp CTGGAGCTGGCCACCACCCGTGAGATGGTGCAGTCCCTGTGCACCTaGTCAACCTTGTCTGCCAGGGCGTGGAGCTTCCTGATGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LELATTREMVQSLCT*STLSARAWSFLMLS
Trigger: GGAGAGCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGCCAGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 72 bp CTCCTGCTGTCACAGGTGCCAGAGCCAGACCAAGGATaGTCAGGACTCCAGACACAGCACTGCTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LLLSQVPEPDQG*SGLQTQHCWSW
Trigger: CCAGCTCCAGCAGTGCTGTGTCTGGAGTCCTGACCATCCTTGGTCTGGCTCTGGCACCTGTGACAGCAGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 90 bp GCCACCACCCGTGAGATGGTGCAGTCCCTGTGCACCTTGTCAACCTaGTCTGCCAGGGCGTGGAGCTTCCTGATGCTCTCCTCAATCTCC +
Preference number: 6 (lower is better)
Translates to: ATTREMVQSLCTLST*SARAWSFLMLSSIS
Trigger: GGAGATTGAGGAGAGCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 72 bp CGTGAGATGGTGCAGTCCCTGTGCACCTTGTCAACCTaGTCTGCCAGGGCGTGGAGCTTCCTGATGCTCTCC +
Preference number: 6 (lower is better)
Translates to: REMVQSLCTLST*SARAWSFLMLS
Trigger: GGAGAGCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS GCA 72 bp GATGGTGCAGTCCCTGTGCACCTTGTCAACCTTGTCTaGCAGGGCGTGGAGCTTCCTGATGCTCTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: DGAVPVHLVNLV*QGVELPDALLN
Trigger: ATTGAGGAGAGCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS TCA 72 bp CCAGCAGGAGGAAGAAACCTGTGGTGGCTGCACCCATaGTTCGGACTCCTTTGGTCATTGCCAGAGTGGTAC +
Preference number: 6 (lower is better)
Translates to: PAGGRNLWWLHP*FGLLWSLPEWY
Trigger: GTACCACTCTGGCAATGACCAAAGGAGTCCGAATCATGGGTGCAGCCACCACAGGTTTCTTCCTCCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 72 bp TCCCTGTGCACCTTGTCAACCTTGTCTGCCAGGGCGTaGAGCTTCCTGATGCTCTCCTCAATCTCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: SLCTLSTLSARA*SFLMLSSISSF
Trigger: GAAACTGGAGATTGAGGAGAGCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS GCA 72 bp GATCACATCCAGCAGGAGGAAGAAACCTGTGGTGGCTaGACCCATGATTCGGACTCCTTTGGTCATTGCCAG +
Preference number: 6 (lower is better)
Translates to: DHIQQEEETCGG*THDSDSFGHCQ
Trigger: CTGGCAATGACCAAAGGAGTCCGAATCATGGGTGCAGCCACCACAGGTTTCTTCCTCCTGCTGGATGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS TCA 72 bp TCCTGTAACTTCAGCTCCAGGTTCCAAGCTTGCTGCTaGAGCTCTGCAGCAGTCTGTGACTTAGCACCCTCA +
Preference number: 6 (lower is better)
Translates to: SCNFSSRFQACC*SSAAVCDLAPS
Trigger: TGAGGGTGCTAAGTCACAGACTGCTGCAGAGCTTCAGCAGCAAGCTTGGAACCTGGAGCTGAAGTTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS TCA 72 bp GTTCCAAGCTTGCTGCTGAAGCTCTGCAGCAGTCTGTaGCTTAGCACCCTCATGCAAATGCTTCGAGTCTTC +
Preference number: 6 (lower is better)
Translates to: VPSLLLKLCSSL*LSTLMQMLRVF
Trigger: GAAGACTCGAAGCATTTGCATGAGGGTGCTAAGTCACAGACTGCTGCAGAGCTTCAGCAGCAAGCTTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS GCA 72 bp TCTGCAGCAGTCTGTGACTTAGCACCCTCATGCAAATaGTTCGAGTCTTCCACAAGGCTGATCACATCCAGC +
Preference number: 6 (lower is better)
Translates to: SAAVCDLAPSCK*FESSTRLITSS
Trigger: GCTGGATGTGATCAGCCTTGTGGAAGACTCGAAGCATTTGCATGAGGGTGCTAAGTCACAGACTGCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 72 bp CAGCAAGAGACTCTCGCAAGGCAGCTTCCTCTTCCCTaGACAAATCAACTTCTGCCACAAACTGTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: QQETLARQLPLP*TNQLLPQTVSR
Trigger: CCTGGAAACAGTTTGTGGCAGAAGTTGATTTGTCCAGGGAAGAGGAAGCTGCCTTGCGAGAGTCTCTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062562.7
ENSMUST00000230863.2
CDS TCA 72 bp TCCAAAGGCTTTCTGCACCTGTTTAGTGGTTTGGGTTaGTGTCTTTCCTGTGGTCATGAGACGCCTGGCATC +
Preference number: 6 (lower is better)
Translates to: SKGFLHLFSGLG*CLSCGHETPGI
Trigger: GATGCCAGGCGTCTCATGACCACAGGAAAGACATCAACCCAAACCACTAAACAGGTGCAGAAAGCCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 72 bp GTACCTCCAAAGGCTTTCTGCACCTGTTTAGTGGTTTaGGTTGATGTCTTTCCTGTGGTCATGAGACGCCTG +
Preference number: 6 (lower is better)
Translates to: VPPKAFCTCLVV*VDVFPVVMRRL
Trigger: CAGGCGTCTCATGACCACAGGAAAGACATCAACCCAAACCACTAAACAGGTGCAGAAAGCCTTTGGAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 90 bp TCAGTCAGGGCTTCACTCAAGGCATCTTCCTCTTTCCTCTCGTTCTaGTCCTGCAGGTCAATTTGGAGTTCATCTTCATCTTCTCCATCA +
Preference number: 6 (lower is better)
Translates to: SVRASLKASSSFLSF*SCRSIWSSSSSSPS
Trigger: TGATGGAGAAGATGAAGATGAACTCCAAATTGACCTGCAGGACAAGAACGAGAGGAAAGAGGAAGATGCCTTGAGTGAAGCCCTGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 72 bp GGCCACTCTGATCCAAAACTTCTATTATGCCCTTCATaGTGTCTTTGTTGGTTGGCACCAGGTTCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: GHSDPKLLLCPS*CLCWLAPGSWL
Trigger: AAGCCAGGAACCTGGTGCCAACCAACAAAGACACAATGAAGGGCATAATAGAAGTTTTGGATCAGAGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 90 bp CAAGGCATCTTCCTCTTTCCTCTCGTTCTTGTCCTGCAGGTCAATTaGGAGTTCATCTTCATCTTCTCCATCAGGATCTGCAAAGATCTC +
Preference number: 6 (lower is better)
Translates to: QGIFLFPLVLVLQVN*EFIFIFSIRICKDL
Trigger: GAGATCTTTGCAGATCCTGATGGAGAAGATGAAGATGAACTCCAAATTGACCTGCAGGACAAGAACGAGAGGAAAGAGGAAGATGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 90 bp CCAAGGATAAGCATCCAAGAACCTTTCCTTGTGCCACAGGTCATTTaGGATCTCCTCTTCATCTTCTGCATCAGTATCAGCTATGGTCTC +
Preference number: 6 (lower is better)
Translates to: PRISIQEPFLVPQVI*DLLFIFCISISYGL
Trigger: GAGACCATAGCTGATACTGATGCAGAAGATGAAGAGGAGATCCAAAATGACCTGTGGCACAAGGAAAGGTTCTTGGATGCTTATCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CCA 72 bp GCATCCAAGAACCTTTCCTTGTGCCACAGGTCATTTTaGATCTCCTCTTCATCTTCTGCATCAGTATCAGCT +
Preference number: 6 (lower is better)
Translates to: ASKNLSLCHRSF*ISSSSSASVSA
Trigger: AGCTGATACTGATGCAGAAGATGAAGAGGAGATCCAAAATGACCTGTGGCACAAGGAAAGGTTCTTGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 72 bp TCCAAAACTTCTATTATGCCCTTCATTGTGTCTTTGTaGGTTGGCACCAGGTTCCTGGCTTTAGCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: SKTSIMPFIVSL*VGTRFLALASA
Trigger: TGCTGAAGCTAAAGCCAGGAACCTGGTGCCAACCAACAAAGACACAATGAAGGGCATAATAGAAGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7
CDS CAA 90 bp GTTGGCTTTGGACAACTGAATGGCATTAATACATTTTTGGATGCCTaGTATATTCTGGATGGTATTTGTAGATCCAGAAATAAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: VGFGQLNGINTFLDA*YILDGICRSRNKSG
Trigger: CCCAGACTTATTTCTGGATCTACAAATACCATCCAGAATATACAAGGCATCCAAAAATGTATTAATGCCATTCAGTTGTCCAAAGCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062562.7