Pregenerated sensors for APOL7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010601Ensembl transcript IDs: ENSMUST00000010745.13, ENSMUST00000175919.8, ENSMUST00000176074.9
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGCTGGGAGCAGTGCAGTGGGCAAAGCTTAGGAGCAGCCATGTaGCTTAGTCAGGACTTGGATGCGCTCCCCAGCTTGGGAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LSWEQCSGQSLGAAM*LSQDLDALPSLGAW Trigger: CCAAGCTCCCAAGCTGGGGAGCGCATCCAAGTCCTGACTAAGCCACATGGCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CCA 90 bp | GGAAGATTGACAGCTCAGTGGATGGTGAGGTTGGTGAGCCTCAGCTaGGAGCAGTGCAGTGGGCAAAGCTTAGGAGCAGCCATGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: GRLTAQWMVRLVSLS*EQCSGQSLGAAMWL Trigger: AAGCCACATGGCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGCTGTCAATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CCA 90 bp | ATGTGGCTTAGTCAGGACTTGGATGCGCTCCCCAGCTTGGGAGCTTaGCTGTTAATTGGGAAGTTGATGGATCTAAGAGCTGGAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: MWLSQDLDALPSLGA*LLIGKLMDLRAGVW Trigger: CCAGACTCCAGCTCTTAGATCCATCAACTTCCCAATTAACAGCCAAGCTCCCAAGCTGGGGAGCGCATCCAAGTCCTGACTAAGCCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CAA 90 bp | AATCACAAAGCAGTGGGAAGATTGACAGCTCAGTGGATGGTGAGGTaGGTGAGCCTCAGCTGGGAGCAGTGCAGTGGGCAAAGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: NHKAVGRLTAQWMVR*VSLSWEQCSGQSLG Trigger: TCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGCTGTCAATCTTCCCACTGCTTTGTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CCA 90 bp | CTCACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGGCTGGGAGCAGTGCAGTaGGCAAAGCTTAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTSRTMSPLLSLTSTVAWLGAVQ*AKLRSS Trigger: GCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAG...CCATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CAA 90 bp | AAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATaGACAGCTCAGTGGATGGTGAGGTTGGTGAGCCTCAGCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KREGLCATNHKAVGR*TAQWMVRLVSLSWE Trigger: CTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGCTGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTGAGCTTTTCACCAACAGCACCCATGTGACCCAAAACCAAGAACAGGAACTGGGAGCAGTGCAGTaGGCAAAGCTTAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLELFTNSTHVTQNQEQELGAVQ*AKLRSS Trigger: GCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAG...TTCCTGTTCTTGGTTTTGGGTCACATGGGTGCTGTTGGTGAAAAGCTCAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR GCA 90 bp | AATGAGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTCTCAGCTGGGAGCAGTaGAGTGGGCAAAGCTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NEAEEEKRRSLCHQSQSSLSWEQ*SGQSLG Trigger: TCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAG...ACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGAGATTGACAGCTCAGTaGATGGTGAGGTTGGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: THQSYNVTSPFLNIHSGMRLTAQ*MVRLVS Trigger: GCTCACCAACCTCACCATCCACTGAGCTGTCAATCT...CATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGGAAGTCTGGTAAGTGGTCATaGGATTGTCCCATCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TSRTMSPLLSLTSTVAWKSGKWS*DCPISV Trigger: AACAGAGATGGGACAATCTCATGACCACTTACCAGA...CTTCCATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGTCTGGTAAGTGGTCATaGGATTGTCCCATCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: THQSYNVTSPFLNIHSGMSGKWS*DCPISV Trigger: AACAGAGATGGGACAATCTCATGACCACTTACCAGA...CATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR GCA 90 bp | CACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGGAATCCTGTATTTTAATGTaGCCTCTCCCTTTAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: HQSYNVTSPFLNIHSGMESCILM*PLPLAG Trigger: GCCTGCTAAAGGGAGAGGGCACATTAAAATACAGGA...TTCCATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACAGCTCAGTGGATGGTGAGAGCTTGGCTGTTAATTaGGAAGTTGATGGATCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LCHQSQSSGKIDSSVDGESLAVN*EVDGSK Trigger: CTTAGATCCATCAACTTCCCAATTAACAGCCAAGCT...CTCACCATCCACTGAGCTGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACATCCTGTATTTTAATGTaGCCTCTCCCTTTAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KKREGLCATNHKAVGRLTSCILM*PLPLAG Trigger: GCCTGCTAAAGGGAGAGGGCACATTAAAATACAGGA...TGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGAAGCTTGGCTGTTAATTaGGAAGTTGATGGATCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: RQKKKREGLCATNHKAVGSLAVN*EVDGSK Trigger: CTTAGATCCATCAACTTCCCAATTAACAGCCAAGCT...TCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CCA 72 bp | ACAGCTCAGTGGATGGTGAGGTTGGTGAGCCTCAGCTaGGAGCAGTGCAGTGGGCAAAGCTTAGGAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAQWMVRLVSLS*EQCSGQSLGAA Trigger: GGCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCTCAGCTGGGAGCAGTGCAGTGGGCAAAGCTTAGGAGCAGCCATGTGGCTTCTGTTAATTGGGAAGTaGATGGATCTAAGAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSWEQCSGQSLGAAMWLLLIGK*MDLRAG Trigger: TCCAGCTCTTAGATCCATCAACTTCCCAATTAACAG...AAGCCACATGGCTGCTCCTAAGCTTTGCCCACTGCACTGCTCCCAGCTGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR GCA 72 bp | TGTCCCATCTCTGTTCTGGCTTCCTGTATTTTAATGTaGCCTCTCCCTTTAGCAGGCACTGCTGTGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CPISVLASCILM*PLPLAGTAVRG Trigger: ACCCCTCACAGCAGTGCCTGCTAAAGGGAGAGGGCACATTAAAATACAGGAAGCCAGAACAGAGATGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CAA 90 bp | ACTCACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGAAAGCAGTGGGAAGATaGACAGCTCAGTGGATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: THQSYNVTSPFLNIHSGMKAVGR*TAQWMV Trigger: CACCATCCACTGAGCTGTCAATCTTCCCACTGCTTT...CATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CAA 90 bp | CACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGGAACCCCTCTTTCTAGTCTaGAGCTTTTCACCAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HQSYNVTSPFLNIHSGMEPLFLV*SFSPTA Trigger: TGCTGTTGGTGAAAAGCTCAAGACTAGAAAGAGGGG...TTCCATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR-3UTR CAA 90 bp | AATGAGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTCTGTTAATTGGGAAGTaGATGGATCTAAGAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NEAEEEKRRSLCHQSQSSLLIGK*MDLRAG Trigger: TCCAGCTCTTAGATCCATCAACTTCCCAATTAACAG...ACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGTGGATGGTGAGGTTGGTGAGCCTCAGCTGGGAGCAGTGCAGTGGGCAATGGTTGGCACCAGCTTaGTGGCTTCATCTTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AQWMVRLVSLSWEQCSGQWLAPA*WLHLQQ Trigger: CTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCA...TTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CAA 72 bp | GCAGTGGGAAGATTGACAGCTCAGTGGATGGTGAGGTaGGTGAGCCTCAGCTGGGAGCAGTGCAGTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: AVGRLTAQWMVR*VSLSWEQCSGQ Trigger: TTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGCTGTCAATCTTCCCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | GGCTCCCATGTGTTCATGGCTCTGTCCAGCACACTCCCTCCCCAGTCATCTGAGGAGACAGACCAAGGATaGTCAGGACTCCAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: GSHVFMALSSTLPPQSSEETDQG*SGLQTQ Trigger: CTGTGTCTGGAGTCCTGATCATCCTTGGTCTGTCTC...CTCAGATGACTGGGGAGGGAGTGTGCTGGACAGAGCCATGAACACATGGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | TTAATGTGCCCTCTCCCTTTAGCAGGCACTGCTGTGAGGGGTACAGTCAGGGGCTTCTGCTCCAGGTCCTaGGCTTGCTTCCTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LMCPLPLAGTAVRGTVRGFCSRS*ACFLSS Trigger: AGAGCTGAGGAAGCAAGCTCAGGACCTGGAGCAGAA...GCCCCTGACTGTACCCCTCACAGCAGTGCCTGCTAAAGGGAGAGGGCACATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | GGCTCCCATGTGTTCATGGCTCTGTCCAGCACACTCCCTCCCCAGTCATCTGAGCAGAAGGAAGAAACCTaGAGTGGCTGCACCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: GSHVFMALSSTLPPQSSEQKEET*SGCTHD Trigger: ATCATGGGTGCAGCCACTGCAGGTTTCTTCCTTCTG...CTCAGATGACTGGGGAGGGAGTGTGCTGGACAGAGCCATGAACACATGGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| 3UTR CAA 72 bp | CAAAGCTTAGGAGCAGCCATGTGGCTTAGTCAGGACTaGGATGCGCTCCCCAGCTTGGGAGCTTGGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: QSLGAAMWLSQD*DALPSLGAWLL Trigger: TAACAGCCAAGCTCCCAAGCTGGGGAGCGCATCCAAGTCCTGACTAAGCCACATGGCTGCTCCTAAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | TGGATGGTGAGGTTGGTGAGCCTCAGCTGGGAGCAGTGCAGTGGGCAAAGCTTACAGAAGGAAGAAACCTaGAGTGGCTGCACCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: WMVRLVSLSWEQCSGQSLQKEET*SGCTHD Trigger: ATCATGGGTGCAGCCACTGCAGGTTTCTTCCTTCTG...TAAGCTTTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | CACCAGTCGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGGAAGCCGCAGGTCCTCTGTaGTCCATGTGTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: HQSYNVTSPFLNIHSGMEAAGPL*SMCPGG Trigger: ACCTCCTGGACACATGGAGCACAGAGGACCTGCGGC...TTCCATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACGACTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR CCA 90 bp | GCTCAGTGGATGGTGAGGTTGGTGAGCCTCAGCTGGGAGCAGTGCAGTGGGCAATGCCACAGATCATTTTaGATCTCCTCTTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AQWMVRLVSLSWEQCSGQCHRSF*ISSSSS Trigger: GGAAGATGAAGAGGAGATCCAAAATGATCTGTGGCA...TTGCCCACTGCACTGCTCCCAGCTGAGGCTCACCAACCTCACCATCCACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | AAAATTGTGCCTATTGATGGTTCCCTGGAGTCTGGTAGCAGAGAGAAGAACTCAGCCGCAGGTCCTCTGTaGTCCATGTGTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KIVPIDGSLESGSREKNSAAGPL*SMCPGG Trigger: ACCTCCTGGACACATGGAGCACAGAGGACCTGCGGC...TGAGTTCTTCTCTCTGCTACCAGACTCCAGGGAACCATCAATAGGCACAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | AGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGACTCTGCAGCAGTCTGTaGCTTAGCACCTTCATGCAA | + |
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Preference number: 4 (lower is better) Translates to: RQKKKREGLCATNHKAVGLCSSL*LSTFMQ Trigger: TTGCATGAAGGTGCTAAGTCACAGACTGCTGCAGAG...TCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | AAAATTGTGCCTATTGATGGTTCCCTGGAGTCTGGTAGCAGAGAGAAGAACTCATTCTGCTCCAGGTCCTaGGCTTGCTTCCTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KIVPIDGSLESGSREKNSFCSRS*ACFLSS Trigger: AGAGCTGAGGAAGCAAGCTCAGGACCTGGAGCAGAA...TGAGTTCTTCTCTCTGCTACCAGACTCCAGGGAACCATCAATAGGCACAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | AGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGATCAGCAAGAGATTCCTaGAAGGCAGCTTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RQKKKREGLCATNHKAVGSARDS*KAASSS Trigger: GGAAGAGGAAGCTGCCTTGCAGGAATCTCTTGCTGA...TCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | ACAATGAGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGAGACAGACCAAGGATaGTCAGGACTCCAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: TMRQKKKREGLCATNHKAETDQG*SGLQTQ Trigger: CTGTGTCTGGAGTCCTGATCATCCTTGGTCTGTCTC...TGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCTCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR GCA 90 bp | TTGTCCCATCTCTGTTCTGGCTTCCTGTATTTTAATGTGCCCTCTCCCTTTAGCTCAGCAAGAGATTCCTaGAAGGCAGCTTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSHLCSGFLYFNVPSPFSSARDS*KAASSS Trigger: GGAAGAGGAAGCTGCCTTGCAGGAATCTCTTGCTGA...GCTAAAGGGAGAGGGCACATTAAAATACAGGAAGCCAGAACAGAGATGGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | CTGTGCCACCAATCACAAAGCAGTGGGAAGATTGACAGCTCAGTGGATGGTGAGATGCCTTGCAATCTCTaGATGGTGTCTGTAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: LCHQSQSSGKIDSSVDGEMPCNL*MVSVDK Trigger: TTTATCTACAGACACCATTCAGAGATTGCAAGGCAT...CTCACCATCCACTGAGCTGTCAATCTTCCCACTGCTTTGTGATTGGTGGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR CCA 90 bp | AAAATTGTGCCTATTGATGGTTCCCTGGAGTCTGGTAGCAGAGAGAAGAACTCATTGGCACCAGCTTGCTaGCTTCATCTTCAGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: KIVPIDGSLESGSREKNSLAPAC*LHLQQT Trigger: TGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAA...TGAGTTCTTCTCTCTGCTACCAGACTCCAGGGAACCATCAATAGGCACAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR CCA 90 bp | AGCTTGGCTGTTAATTGGGAAGTTGATGGATCTAAGAGCTGGAGTCTGGTAAGTTTGGCACCAGCTTGCTaGCTTCATCTTCAGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: SLAVNWEVDGSKSWSLVSLAPAC*LHLQQT Trigger: TGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAA...ACTTACCAGACTCCAGCTCTTAGATCCATCAACTTCCCAATTAACAGCCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR CCA 90 bp | AATGAGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTTGTGTCTTTGTTGGTTaGCACCAGCTTGCTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NEAEEEKRRSLCHQSQSSCVFVG*HQLAGF Trigger: GAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACA...ACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR CCA 90 bp | AAAATTGTGCCTATTGATGGTTCCCTGGAGTCTGGTAGCAGAGAGAAGAACTCATGCCACAGATCATTTTaGATCTCCTCTTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KIVPIDGSLESGSREKNSCHRSF*ISSSSS Trigger: GGAAGATGAAGAGGAGATCCAAAATGATCTGTGGCA...TGAGTTCTTCTCTCTGCTACCAGACTCCAGGGAACCATCAATAGGCACAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR TCA 90 bp | AATGAGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTATGCCTTGCAATCTCTaGATGGTGTCTGTAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: NEAEEEKRRSLCHQSQSSMPCNL*MVSVDK Trigger: TTTATCTACAGACACCATTCAGAGATTGCAAGGCAT...ACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS TCA 90 bp | GATCAGGACTCCAGACACAGCACTGCTGGAGCTGGCCACCACCCGTaGGATGGTGCAGTCCCTGTGCACCTTGTCAACCTTGTCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: DQDSRHSTAGAGHHP*DGAVPVHLVNLVCQ Trigger: CTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGCCAGCTCCAGCAGTGCTGTGTCTGGAGTCCTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 90 bp | CGAGTCTTCCACAAGGCTGATCACATCCTGCAGAAGGAAGAAACCTaGAGTGGCTGCACCCATGATTCGGGCTCCTTTGGTCATTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVFHKADHILQKEET*SGCTHDSGSFGHCQ Trigger: CTGGCAATGACCAAAGGAGCCCGAATCATGGGTGCAGCCACTGCAGGTTTCTTCCTTCTGCAGGATGTGATCAGCCTTGTGGAAGACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTACAGTCAGGGGCTCCCATGTGTTCATGGCTCTGTCCAGCACACTCCCTCGCATTTCTGAATGCCTaGCAATCTCTGAATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVQSGAPMCSWLCPAHSLAFLNA*QSLNGV Trigger: GACACCATTCAGAGATTGCAAGGCATTCAGAAATGC...GAGGGAGTGTGCTGGACAGAGCCATGAACACATGGGAGCCCCTGACTGTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS TCA 90 bp | CTGCTCCAGGTCCTGAGCTTGCTTCCTCAGCTCTGCAGCAGTCTGTaGCTTAGCACCTTCATGCAAATGCTTCGAGTCTTCCACAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQVLSLLPQLCSSL*LSTFMQMLRVFHKA Trigger: AGCCTTGTGGAAGACTCGAAGCATTTGCATGAAGGTGCTAAGTCACAGACTGCTGCAGAGCTGAGGAAGCAAGCTCAGGACCTGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 90 bp | GAAACCTGCAGTGGCTGCACCCATGATTCGGGCTCCTTTGGTCATTaGCAGAGCGGTACCTCCAAAGGCTTTCTGCACCTGTTTAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETCSGCTHDSGSFGH*QSGTSKGFLHLFSV Trigger: AACACTAAACAGGTGCAGAAAGCCTTTGGAGGTACCGCTCTGGCAATGACCAAAGGAGCCCGAATCATGGGTGCAGCCACTGCAGGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 90 bp | AGATTCCTGCAAGGCAGCTTCCTCTTCCCTGGACAAATCAACTTCTaGCACAAAGTGTTTCCAGGTTTCTTCTTCTGTCAGCAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RFLQGSFLFPGQINF*HKVFPGFFFCQQEP Trigger: CGGCTCCTGCTGACAGAAGAAGAAACCTGGAAACACTTTGTGGCAGAAGTTGATTTGTCCAGGGAAGAGGAAGCTGCCTTGCAGGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGATTGGTTGGCACCAGCTaGCTGGCTTCATCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQKKKREGLCATNHKAVGLVGTS*LASSSA Trigger: TGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAA...TCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS-3UTR CAA 90 bp | CGTACAATGTCACCTCTCCTTTCCTTAACATCCACAGTGGCATGGAAGGCCAAGGTGGTCATGAGACGCTaGGCATTATTTGCTAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RTMSPLLSLTSTVAWKAKVVMRR*ALFARR Trigger: TCGCCTAGCAAATAATGCCAAGCGTCTCATGACCAC...CTTGGCCTTCCATGCCACTGTGGATGTTAAGGAAAGGAGAGGTGACATTGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 90 bp | TCATCTTCTCCATCAGGATCTGCAAAGATCTCAGCAAGAGATTCCTaGAAGGCAGCTTCCTCTTCCCTGGACAAATCAACTTCTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSGSAKISARDS*KAASSSLDKSTSAT Trigger: TGTGGCAGAAGTTGATTTGTCCAGGGAAGAGGAAGCTGCCTTGCAGGAATCTCTTGCTGAGATCTTTGCAGATCCTGATGGAGAAGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CCA 90 bp | CTTTCATGCCCTTCATTGTGTCTTTGTTGGTTGGCACCAGCTTGCTaGCTTCATCTTCAGCAGACACCACACTTACCTTTTCCACAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LSCPSLCLCWLAPAC*LHLQQTPHLPFPQC Trigger: GCATTGTGGAAAAGGTAAGTGTGGTGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CCA 90 bp | CACTCTGATCCAAAACTTCTTTCATGCCCTTCATTGTGTCTTTGTTaGTTGGCACCAGCTTGCTGGCTTCATCTTCAGCAGACACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: HSDPKLLSCPSLCLC*LAPACWLHLQQTPH Trigger: GTGTGGTGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS-3UTR CAA 90 bp | ACAATGAGGCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCATTGGTTGGCACCAGCTaGCTGGCTTCATCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TMRQKKKREGLCATNHKALVGTS*LASSSA Trigger: TGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAA...TGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGCCTCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 90 bp | CTGAAGGTCATTTTGGAGCTCATCTTCATCTTCTCCATCAGGATCTaGAAAGATCTCAGCAAGAGATTCCTGCAAGGCAGCTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKVILELIFIFSIRI*KDLSKRFLQGSFLF Trigger: GAAGAGGAAGCTGCCTTGCAGGAATCTCTTGCTGAGATCTTTGCAGATCCTGATGGAGAAGATGAAGATGAGCTCCAAAATGACCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAAGAAGAAAAGAGAAGGTCTCTGTGCCACCAATCACAAAGCAGTGGGAAGGCATTTCTGAATGCCTaGCAATCTCTGAATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEEEKRRSLCHQSQSSGKAFLNA*QSLNGV Trigger: GACACCATTCAGAGATTGCAAGGCATTCAGAAATGC...CTTCCCACTGCTTTGTGATTGGTGGCACAGAGACCTTCTCTTTTCTTCTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CCA 90 bp | CAAAGATCTCAGCAAGAGATTCCTGCAAGGCAGCTTCCTCTTCCCTaGACAAATCAACTTCTGCCACAAAGTGTTTCCAGGTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QRSQQEIPARQLPLP*TNQLLPQSVSRFLL Trigger: AAGAAGAAACCTGGAAACACTTTGTGGCAGAAGTTGATTTGTCCAGGGAAGAGGAAGCTGCCTTGCAGGAATCTCTTGCTGAGATCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 90 bp | ATAAAGAAAGAAGTCTGGGACCACTCTGATCCAAAACTTCTTTCATaGCCTTCATTGTGTCTTTGTTGGTTGGCACCAGCTTGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IKKEVWDHSDPKLLS*PSLCLCWLAPACWL Trigger: AAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGAGTGGTCCCAGACTTCTTTCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS TCA 90 bp | AGATCTTCACTCAAGGAATCTTCCTCTTTCCTCTCGTTCTTGTCCTaGAGGTCATTTTGGAGCTCATCTTCATCTTCTCCATCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSLKESSSFLSFLS*RSFWSSSSSSPSGS Trigger: AGATCCTGATGGAGAAGATGAAGATGAGCTCCAAAATGACCTTCAGGACAAGAACGAGAGGAAAGAGGAAGATTCCTTGAGTGAAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CAA 90 bp | CTGGAGCTGGCCACCACCCGTGAGATGGTGCAGTCCCTGTGCACCTaGTCAACCTTGTCTGCCAGGGCGTGGAGCTTCCTGATGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LELATTREMVQSLCT*STLSARAWSFLMIS Trigger: GGAGATCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACGGGTGGTGGCCAGCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | CGTGAGATGGTGCAGTCCCTGTGCACCTTGTCAACCTaGTCTGCCAGGGCGTGGAGCTTCCTGATGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: REMVQSLCTLST*SARAWSFLMIS Trigger: GGAGATCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 72 bp | GATGGTGCAGTCCCTGTGCACCTTGTCAACCTTGTCTaGCAGGGCGTGGAGCTTCCTGATGATCTCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: DGAVPVHLVNLV*QGVELPDDLLK Trigger: CTTGAGGAGATCATCAGGAAGCTCCACGCCCTGGCAGACAAGGTTGACAAGGTGCACAGGGACTGCACCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 72 bp | AGTGGCTGCACCCATGATTCGGGCTCCTTTGGTCATTaGCAGAGCGGTACCTCCAAAGGCTTTCTGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGCTHDSGSFGH*QSGTSKGFLHL Trigger: CAGGTGCAGAAAGCCTTTGGAGGTACCGCTCTGGCAATGACCAAAGGAGCCCGAATCATGGGTGCAGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CAA 72 bp | AAACCTGCAGTGGCTGCACCCATGATTCGGGCTCCTTaGGTCATTGCCAGAGCGGTACCTCCAAAGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KPAVAAPMIRAP*VIARAVPPKAF Trigger: GAAAGCCTTTGGAGGTACCGCTCTGGCAATGACCAAAGGAGCCCGAATCATGGGTGCAGCCACTGCAGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CAA 90 bp | AGAAGGAAGAAACCTGCAGTGGCTGCACCCATGATTCGGGCTCCTTaGGTCATTGCCAGAGCGGTACCTCCAAAGGCTTTCTGCACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRKKPAVAAPMIRAP*VIARAVPPKAFCTC Trigger: ACAGGTGCAGAAAGCCTTTGGAGGTACCGCTCTGGCAATGACCAAAGGAGCCCGAATCATGGGTGCAGCCACTGCAGGTTTCTTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS TCA 72 bp | ACCTCTTTGAGCTCCTGTAACTTCTGCTCCAGGTCCTaGGCTTGCTTCCTCAGCTCTGCAGCAGTCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSLSSCNFCSRS*ACFLSSAAVCD Trigger: GTCACAGACTGCTGCAGAGCTGAGGAAGCAAGCTCAGGACCTGGAGCAGAAGTTACAGGAGCTCAAAGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 72 bp | GATCACATCCTGCAGAAGGAAGAAACCTGCAGTGGCTaGACCCATGATTCGGGCTCCTTTGGTCATTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DHILQKEETCSG*THDSGSFGHCQ Trigger: CTGGCAATGACCAAAGGAGCCCGAATCATGGGTGCAGCCACTGCAGGTTTCTTCCTTCTGCAGGATGTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS GCA 72 bp | CACAAGGCTGATCACATCCTGCAGAAGGAAGAAACCTaGAGTGGCTGCACCCATGATTCGGGCTCCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HKADHILQKEET*SGCTHDSGSFG Trigger: ACCAAAGGAGCCCGAATCATGGGTGCAGCCACTGCAGGTTTCTTCCTTCTGCAGGATGTGATCAGCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS TCA 72 bp | GTCCTGAGCTTGCTTCCTCAGCTCTGCAGCAGTCTGTaGCTTAGCACCTTCATGCAAATGCTTCGAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLSLLPQLCSSL*LSTFMQMLRVF Trigger: GAAGACTCGAAGCATTTGCATGAAGGTGCTAAGTCACAGACTGCTGCAGAGCTGAGGAAGCAAGCTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CAA 72 bp | TTTCGGGCAGATATCTTCCCTGTGGTCATGAGACGCTaGGCATTATTTGCTAGGCGAGTGTTGGCTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FRADIFPVVMRR*ALFARRVLALA Trigger: GGCCAAAGCCAACACTCGCCTAGCAAATAATGCCAAGCGTCTCATGACCACAGGGAAGATATCTGCCCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS GCA 72 bp | TGCCCTTCATTGTGTCTTTGTTGGTTGGCACCAGCTTaGTGGCTTCATCTTCAGCAGACACCACACTTACCT | + |
|
Preference number: 6 (lower is better) Translates to: CPSLCLCWLAPA*WLHLQQTPHLP Trigger: AGGTAAGTGTGGTGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | ATGCCCTTCATTGTGTCTTTGTTGGTTGGCACCAGCTaGCTGGCTTCATCTTCAGCAGACACCACACTTACC | + |
|
Preference number: 6 (lower is better) Translates to: MPFIVSLLVGTS*LASSSADTTLT Trigger: GGTAAGTGTGGTGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CAA 90 bp | GAAGTCTGGGACCACTCTGATCCAAAACTTCTTTCATGCCCTTCATaGTGTCTTTGTTGGTTGGCACCAGCTTGCTGGCTTCATCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVWDHSDPKLLSCPS*CLCWLAPACWLHLQ Trigger: CTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGAGTGGTCCCAGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS GCA 72 bp | GAAGTCTGGGACCACTCTGATCCAAAACTTCTTTCATaGCCTTCATTGTGTCTTTGTTGGTTGGCACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EVWDHSDPKLLS*PSLCLCWLAPA Trigger: AGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGAGTGGTCCCAGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CCA 72 bp | CCTTCATTGTGTCTTTGTTGGTTGGCACCAGCTTGCTaGCTTCATCTTCAGCAGACACCACACTTACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSLCLCWLAPAC*LHLQQTPHLPF Trigger: AAAAGGTAAGTGTGGTGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | GACCACTCTGATCCAAAACTTCTTTCATGCCCTTCATaGTGTCTTTGTTGGTTGGCACCAGCTTGCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DHSDPKLLSCPS*CLCWLAPACWL Trigger: AAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGAGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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| CDS CAA 90 bp | TCTGATCCAAAACTTCTTTCATGCCCTTCATTGTGTCTTTGTTGGTaGGCACCAGCTTGCTGGCTTCATCTTCAGCAGACACCACACTTA | + |
|
Preference number: 6 (lower is better) Translates to: SDPKLLSCPSLCLCW*APACWLHLQQTPHL Trigger: TAAGTGTGGTGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS GCA 72 bp | ATTTTGGAGCTCATCTTCATCTTCTCCATCAGGATCTaGAAAGATCTCAGCAAGAGATTCCTGCAAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILELIFIFSIRI*KDLSKRFLQGS Trigger: GCTGCCTTGCAGGAATCTCTTGCTGAGATCTTTGCAGATCCTGATGGAGAAGATGAAGATGAGCTCCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | TTCCTCTTTCCTCTCGTTCTTGTCCTGAAGGTCATTTaGGAGCTCATCTTCATCTTCTCCATCAGGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLFPLVLVLKVI*ELIFIFSIRIC Trigger: GCAGATCCTGATGGAGAAGATGAAGATGAGCTCCAAAATGACCTTCAGGACAAGAACGAGAGGAAAGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | AAACTTCTTTCATGCCCTTCATTGTGTCTTTGTTGGTaGGCACCAGCTTGCTGGCTTCATCTTCAGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: KLLSCPSLCLCW*APACWLHLQQT Trigger: TGTCTGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | TCCAAAACTTCTTTCATGCCCTTCATTGTGTCTTTGTaGGTTGGCACCAGCTTGCTGGCTTCATCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SKTSFMPFIVSL*VGTSLLASSSA Trigger: TGCTGAAGATGAAGCCAGCAAGCTGGTGCCAACCAACAAAGACACAATGAAGGGCATGAAAGAAGTTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 90 bp | CAAGGAATCTTCCTCTTTCCTCTCGTTCTTGTCCTGAAGGTCATTTaGGAGCTCATCTTCATCTTCTCCATCAGGATCTGCAAAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGIFLFPLVLVLKVI*ELIFIFSIRICKDL Trigger: GAGATCTTTGCAGATCCTGATGGAGAAGATGAAGATGAGCTCCAAAATGACCTTCAGGACAAGAACGAGAGGAAAGAGGAAGATTCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 90 bp | CTGAGGATAAGCATCCAAGAACCTTTCCTTGTGCCACAGATCATTTaGGATCTCCTCTTCATCTTCCGTATTACTATCTTCACCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRISIQEPFLVPQII*DLLFIFRITIFTFC Trigger: ACAGAAGGTGAAGATAGTAATACGGAAGATGAAGAGGAGATCCAAAATGATCTGTGGCACAAGGAAAGGTTCTTGGATGCTTATCCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS TCA 72 bp | GTGTCTGTAGATAAAGAAAGAAGTCTGGGACCACTCTaGTCCAAAACTTCTTTCATGCCCTTCATTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSVDKERSLGPL*SKTSFMPFIVS Trigger: AGACACAATGAAGGGCATGAAAGAAGTTTTGGATCAGAGTGGTCCCAGACTTCTTTCTTTATCTACAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CCA 72 bp | GCATCCAAGAACCTTTCCTTGTGCCACAGATCATTTTaGATCTCCTCTTCATCTTCCGTATTACTATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASKNLSLCHRSF*ISSSSSVLLSS Trigger: TGAAGATAGTAATACGGAAGATGAAGAGGAGATCCAAAATGATCTGTGGCACAAGGAAAGGTTCTTGGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
||
| CDS CAA 72 bp | AGCATCCAAGAACCTTTCCTTGTGCCACAGATCATTTaGGATCTCCTCTTCATCTTCCGTATTACTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SIQEPFLVPQII*DLLFIFRITIF Trigger: GAAGATAGTAATACGGAAGATGAAGAGGAGATCCAAAATGATCTGTGGCACAAGGAAAGGTTCTTGGATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010745.13 ENSMUST00000175919.8 ENSMUST00000176074.9 |
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