Pregenerated sensors for APOL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033576Ensembl transcript IDs: ENSMUST00000127957.8, ENSMUST00000142405.8, ENSMUST00000149569.9, ENSMUST00000152949.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTaGTGTGGTGAGGGTGGGAAGCCCTGGGAGCTACAGAGAGCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: WSPSAQGTSVPTDST*CGEGGKPWELQRAG Trigger: CCCTGCTCTCTGTAGCTCCCAGGGCTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR GCA 90 bp | TGCCCCCAAACCATGCCCAACAGCAGTGAGGACCAGGCTTCCCCCTaGAGTTGTTGTAGCCAGGGCCAAACCCAGGAGACTCAGGACTCC | + |
|
Preference number: 1 (lower is better) Translates to: CPQTMPNSSEDQASP*SCCSQGQTQETQDS Trigger: GGAGTCCTGAGTCTCCTGGGTTTGGCCCTGGCTACAACAACTGCAGGGGGAAGCCTGGTCCTCACTGCTGTTGGGCATGGTTTGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR TCA 90 bp | CTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTaGGGGTGGGAAGCCCTGGGAGCTACAGAGAGCAGGGAGGGACAT | + |
|
Preference number: 1 (lower is better) Translates to: LSPRYFCAHRFHVLW*GWEALGATESREGH Trigger: ATGTCCCTCCCTGCTCTCTGTAGCTCCCAGGGCTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR GCA 90 bp | CCTGGGGAACTCCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTaGCCCATCAGCCTTCCACCCCCACCCTGGTCTTCCTTCACTGAT | + |
|
Preference number: 1 (lower is better) Translates to: PGELPGTSLYVSYRH*PISLPPPPWSSFTD Trigger: ATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142405.8 ENSMUST00000149569.9 |
||
| 3UTR GCA 90 bp | ACTGCCTACCTGCCCCTGAGGTGGAGACAGGAACTTATGACCTCATaGGCTCAATGGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACA | + |
|
Preference number: 1 (lower is better) Translates to: TAYLPLRWRQELMTS*AQWSPSAQGTSVPT Trigger: TGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCCTGTCTCCACCTCAGGGGCAGGTAGGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CCA 90 bp | GATACGTGGCCCGCAGTCATGAGCTTTTTGGCAGCTGAGGTGACGTaGGGTTGGGTTCTGGTTAGCTGGAGGGCTCGGAGGTGCTTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: DTWPAVMSFLAAEVT*GWVLVSWRARRCFL Trigger: CAAAAAGCACCTCCGAGCCCTCCAGCTAACCAGAACCCAACCCCACGTCACCTCAGCTGCCAAAAAGCTCATGACTGCGGGCCACGTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 90 bp | CTGCCCCTGAGGTGGAGACAGGAACTTATGACCTCATGCGCTCAATaGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACG | + |
|
Preference number: 1 (lower is better) Translates to: LPLRWRQELMTSCAQ*SPSAQGTSVPTDST Trigger: CGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCCTGTCTCCACCTCAGGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR TCA 90 bp | CCTTTGTGTGCAAGCATGGCTCTGAGACAACAGTTCCCGCTTTCCTaGGAGACTGAGAGCACTGAAAGAGGTGAGGTGGGGGAGGGACCC | + |
|
Preference number: 1 (lower is better) Translates to: PLCASMALRQQFPLS*ETESTERGEVGEGP Trigger: GGGTCCCTCCCCCACCTCACCTCTTTCAGTGCTCTCAGTCTCTCAGGAAAGCGGGAACTGTTGTCTCAGAGCCATGCTTGCACACAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR GCA 90 bp | CTCCCAGAGAGTATATATGTCCTGGCCAAGGGAGAGGGCAGCAGCTaGACGTCCCATCCTCAGAGCATTTTTGGTCATTGCCAGGGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: LPESIYVLAKGEGSS*TSHPQSIFGHCQGC Trigger: ACAGCCCTGGCAATGACCAAAAATGCTCTGAGGATGGGACGTGCAGCTGCTGCCCTCTCCCTTGGCCAGGACATATATACTCTCTGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 90 bp | CAGCACCTGGACAGCCTGAGAAGAAAGAACGCAGGAAGTCTTGTGTaGGTGGGCCACAGTCCCAAACCTCCTGTGCAATTCTTCCCTAGG | + |
|
Preference number: 1 (lower is better) Translates to: QHLDSLRRKNAGSLV*VGHSPKPPVQFFPR Trigger: CCTAGGGAAGAATTGCACAGGAGGTTTGGGACTGTGGCCCACCCACACAAGACTTCCTGCGTTCTTTCTTCTCAGGCTGTCCAGGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR TCA 90 bp | CGTGGGGTTGGGTTCTGGTTAGCTGGAGGGCTCGGAGGTGCTTTTTaGTATTATCCCAGGCGTTCCCACATTTGTAGACAAGGTCACCGG | + |
|
Preference number: 1 (lower is better) Translates to: RGVGFWLAGGLGGAF*YYPRRSHICRQGHR Trigger: CCGGTGACCTTGTCTACAAATGTGGGAACGCCTGGGATAATATCAAAAAGCACCTCCGAGCCCTCCAGCTAACCAGAACCCAACCCCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 90 bp | TATGTGAGTTACAGGCATTGCCCCATCAGCCTTCCACCCCCACCCTaGTCTTCCTTCACTGATCTCAAAGACTCAAGGTCTCCGTGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: YVSYRHCPISLPPPP*SSFTDLKDSRSPWL Trigger: GAGCCACGGAGACCTTGAGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142405.8 ENSMUST00000149569.9 |
||
| 3UTR TCA 90 bp | AGGTTTATTACAATCTTGGCCATGGGATGTCCTGCAACCCAACCCTaGCACAGCAGGATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCT | + |
|
Preference number: 1 (lower is better) Translates to: RFITILAMGCPATQP*HSRMGREGGAASNP Trigger: AGGGTTTGAGGCTGCTCCACCTTCCCTTCCCATCCTGCTGTGTCAGGGTTGGGTTGCAGGACATCCCATGGCCAAGATTGTAATAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 90 bp | AATGTCTGCAGACATCTCTGCAGACTTCACAAGATAACATCGACATaGCTCTACAGATCCCAGCTGAAGCCTCCAGGCGGGCCTCTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: NVCRHLCRLHKITST*LYRSQLKPPGGPLS Trigger: TGAAAGAGGCCCGCCTGGAGGCTTCAGCTGGGATCTGTAGAGCCATGTCGATGTTATCTTGTGAAGTCTGCAGAGATGTCTGCAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 90 bp | CCACCCTGGTCTTCCTTCACTGATCTCAAAGACTCAAGGTCTCCGTaGCTCCTATTCATCTGTCAGTCACCATCACCAGAGTCTTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: PPWSSFTDLKDSRSP*LLFICQSPSPESCS Trigger: AGAGCAAGACTCTGGTGATGGTGACTGACAGATGAATAGGAGCCACGGAGACCTTGAGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 90 bp | GCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTaGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTCATTTATTTAT | + |
|
Preference number: 1 (lower is better) Translates to: AKDKPWGPSWFVGTA*ALQKVILRLYSFIY Trigger: ATAAATAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 90 bp | AGTTCCCGCTTTCCTGAGAGACTGAGAGCACTGAAAGAGGTGAGGTaGGGGAGGGACCCTCATAGCTTATCATTGCTAATTACTATGGAA | + |
|
Preference number: 1 (lower is better) Translates to: SSRFPERLRALKEVR*GRDPHSLSLLITME Trigger: TTCCATAGTAATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCACCTCTTTCAGTGCTCTCAGTCTCTCAGGAAAGCGGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR GCA 90 bp | ACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTaGAGAAGGTCATTCTCAGGCTTTATTCATTTATTTATCTCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: TSRGVLPGLWVQLGL*RRSFSGFIHLFISL Trigger: TAAAGAGATAAATAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 90 bp | ATTTATCTCTTTAAGATGGAGGCCAGTCCCAAGATGGAGTATGATTaGGCTCTCACTGCCTTGGCTTCCCTATGTGACTGGAAACATATG | + |
|
Preference number: 1 (lower is better) Translates to: IYLFKMEASPKMEYD*ALTALASLCDWKHM Trigger: CATATGTTTCCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 90 bp | AGAAGGTCATTCTCAGGCTTTATTCATTTATTTATCTCTTTAAGATaGAGGCCAGTCCCAAGATGGAGTATGATTGGGCTCTCACTGCCT | + |
|
Preference number: 1 (lower is better) Translates to: RRSFSGFIHLFISLR*RPVPRWSMIGLSLP Trigger: AGGCAGTGAGAGCCCAATCATACTCCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAATAAATGAATAAAGCCTGAGAATGACCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR GCA 90 bp | ATAAACCCTTTTGATCATAGTCTTTATCACAGCTATGGAAATGTCTaGAGACATCTCTGCAGACTTCACAAGATAACATCGACATGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: INPFDHSLYHSYGNV*RHLCRLHKITSTWL Trigger: GAGCCATGTCGATGTTATCTTGTGAAGTCTGCAGAGATGTCTGCAGACATTTCCATAGCTGTGATAAAGACTATGATCAAAAGGGTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 90 bp | ATGGAGTATGATTGGGCTCTCACTGCCTTGGCTTCCCTATGTGACTaGAAACATATGAACCAAATAAACCCTTTTGATCATAGTCTTTAT | + |
|
Preference number: 1 (lower is better) Translates to: MEYDWALTALASLCD*KHMNQINPFDHSLY Trigger: ATAAAGACTATGATCAAAAGGGTTTATTTGGTTCATATGTTTCCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CAA 90 bp | TGCCTGCCACTTCGAGCTGATACGTGGCCCGCAGTCATGAGCTTTTaGGCAGCTGAGGTGACGTGGGGTTGGGTTCTGGTTAGCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CLPLRADTWPAVMSF*AAEVTWGWVLVSWR Trigger: CCTCCAGCTAACCAGAACCCAACCCCACGTCACCTCAGCTGCCAAAAAGCTCATGACTGCGGGCCACGTATCAGCTCGAAGTGGCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCATCAGCCTTCCACCCCCACCCTGGTCTTCCTTCACTGATCTCAAAGACTTTGAGGCAGAAGGGGTaGGCCCAGGCTTCTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: APSAFHPHPGLPSLISKTLRQKG*AQASLP Trigger: AGGGAGAGAAGCCTGGGCTCACCCCTTCTGCCTCAA...AGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGATGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTGAGGGTGGGAAGAATCAGCTCAGGACTTaGGGCAGAAGGGGTGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: AQGTSVPTDSTCCGEGGKNQLRT*GRRGEP Trigger: GGGCTCACCCCTTCTGCCTCAAGTCCTGAGCTGATT...CTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGGGCTCTCACTGCCTTaGCTTCCCTATGTGACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GQGQAVGSFLVCGYSLGSGLSLP*LPYVTG Trigger: TCCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCC...AGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCAGAAAAGTCGCAACCCCAACATTCTGGAGAGGGAAGTACAAACAGCCCCTTCCACGTGCTGTGGTaGGGGTGGGAAGCCCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GSEKSQPQHSGEGSTNSPFHVLW*GWEALG Trigger: TCCCAGGGCTTCCCACCCTCACCACAGCACGTGGAA...GGGGCTGTTTGTACTTCCCTCTCCAGAATGTTGGGGTTGCGACTTTTCTGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCCTTTTTAGACCCTGGGGAACTCCCTGGCACCTCCCTGTATGTGAGTTAGGTGACCCCGGCAACTaGCCCCAAACCATGCCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLFRPWGTPWHLPVCELGDPGN*PQTMPN Trigger: GTTGGGCATGGTTTGGGGGCAGTTGCCGGGGTCACC...TAACTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGGGTCTAAAAAGGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATGGAGGCTGAGTCACCTTGTTTCCTTTCAAAGAGGACCTTGCGGCCTCTTTCATGCCCAACAGCAGTaGGGACCAGGCTTCCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GWRLSHLVSFQRGPCGLFHAQQQ*GPGFPL Trigger: CAGGGGGAAGCCTGGTCCTCACTGCTGTTGGGCATG...AAAGAGGCCGCAAGGTCCTCTTTGAAAGGAAACAAGGTGACTCAGCCTCCATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTGCCCCATCAGCCTTCCACCGTGCAAGCATGGCTCTaGGACAACAGTTCCCGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PWHLPVCELQALPHQPSTVQAWL*DNSSRF Trigger: AAAGCGGGAACTGTTGTCTCAGAGCCATGCTTGCAC...GGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGCTCTGTTGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTAACCCCCTCCAGCTCCTaGTCGCTGTTAGGCATGATG | + |
|
Preference number: 2 (lower is better) Translates to: ASSVGFAAFRSFQSSQRVTPSSS*SLLGMM Trigger: CATCATGCCTAACAGCGACCAGGAGCTGGAGGGGGT...TACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGCTCTGTTGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTAGCAGCTGAGGTGACGTaGGGTTGGGTTCTGGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASSVGFAAFRSFQSSQRVAAEVT*GWVLVS Trigger: GCTAACCAGAACCCAACCCCACGTCACCTCAGCTGC...TACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCAGAAAAGTCGCAACCCCAACATTCTGGAGAGGGAAGTACAAACAGCCCCCCCTGGGGAACTCCCTaGCACCTCCCTGTATGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GSEKSQPQHSGEGSTNSPPWGTP*HLPVCE Trigger: CTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGGG...GGGGCTGTTTGTACTTCCCTCTCCAGAATGTTGGGGTTGCGACTTTTCTGACCC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCCTTTTTAGACCCTGGGGAACTCCCTGGCACCTCCCTGTATGTGAGTTAAGGACGGAGGGTCCCTaGGTGATGACAGCAGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLFRPWGTPWHLPVCELRTEGP*VMTAVD Trigger: GTCCACTGCTGTCATCACCCAGGGACCCTCCGTCCT...TAACTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGGGTCTAAAAAGGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CAA 90 bp | GCTCCCGTTCTGCAGCCCGTGCTCTTAACTCTTCTGCAAGCTCTGTaGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: APVLQPVLLTLLQAL*GLPPSDPSSPPREY Trigger: ATACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGCAGAAGAGTTAAGAGCACGGGCTGCAGAACGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTACTGCCTACCTGCCCCTGAGGTGGAGACAGGAACTTATGACCTCATGCGCTAGCACCTGGACAGCCTaGGAAGAAAGAACGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GTAYLPLRWRQELMTSCASTWTA*EERTQE Trigger: TTCCTGCGTTCTTTCTTCTCAGGCTGTCCAGGTGCT...AGCGCATGAGGTCATAAGTTCCTGTCTCCACCTCAGGGGCAGGTAGGCAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCAGAAAAGTCGCAACCCCAACATTCTGGAGAGGGAAGTACAAACAGCCCCCTGCCTACCTGCCCCTaGGGTGGAGACAGGAACTTA | + |
|
Preference number: 2 (lower is better) Translates to: GSEKSQPQHSGEGSTNSPLPTCP*GGDRNL Trigger: TAAGTTCCTGTCTCCACCTCAGGGGCAGGTAGGCAG...GGGGCTGTTTGTACTTCCCTCTCCAGAATGTTGGGGTTGCGACTTTTCTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTACTGCCTACCTGCCCCTGAGGTGGAGACAGGAACTTATGACCTCATGCGCTCCCAAGGTACTTCTGTaGCCACAGATTCCACGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GTAYLPLRWRQELMTSCAPKVLL*PQIPRA Trigger: AGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGG...AGCGCATGAGGTCATAAGTTCCTGTCTCCACCTCAGGGGCAGGTAGGCAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGGGAACTCCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTGCCCCATCTATAGCACCCACGAGTaGCTTTCAAACCAGCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: PGELPGTSLYVSYRHCPIYSTHE*LSNQQW Trigger: CCATTGCTGGTTTGAAAGTCACTCGTGGGTGCTATA...GATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTGCCCCATCAGCCTTCCACCTTTCAAAGAGGACCTTaGGGCCTCTTTGCTGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PWHLPVCELQALPHQPSTFQRGP*GLFAES Trigger: AGACTCAGCAAAGAGGCCGCAAGGTCCTCTTTGAAA...GGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CAA 90 bp | GTCTCCGTGGCTCCTATTCATCTGTCAGTCACCATCACCAGAGTCTaGCTCTCTCAGTCGAGGAGGATGGAGGCTGAGTCACCTTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VSVAPIHLSVTITRV*LSQSRRMEAESPCF Trigger: GAAACAAGGTGACTCAGCCTCCATCCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGGTGACTGACAGATGAATAGGAGCCACGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTTGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTATATATGTTTTGGCAGCTGAGGTaGCGTGGGGTTGGGTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SVGFAAFRSFQSSQRVYMFWQLR*RGVGFW Trigger: CCAGAACCCAACCCCACGTCACCTCAGCTGCCAAAA...CATATATACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCAGCTATGGAAATGTCTaGAGACATCTCTGCAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: SGQGQAVGSFLVCGYSLGSYGNV*RHLCRL Trigger: AAGTCTGCAGAGATGTCTGCAGACATTTCCATAGCT...GCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCCTTTTTAGACCCTGGGGAACTCCCTGGCACCTCCCTGTATGTGAGTTACCATCACCAGAGTCTTaGTCTCTCAGTCGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSLFRPWGTPWHLPVCELPSPES*SLSRGG Trigger: TCCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGG...TAACTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGGGTCTAAAAAGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTTTTATCTCTTTAAGATaGAGGCCAGTCCCAAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GQGQAVGSFLVCGYSLGSFISLR*RPVPRW Trigger: CCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAA...AGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCCTTCCACCCCCACCCTGGTCTTCCTTCACTGATCTCAAAGACTCAAGGTCTCGGAGGTGCTTTTTaGTATTATCCCAGGCGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SAFHPHPGLPSLISKTQGLGGAF*YYPRRS Trigger: GGAACGCCTGGGATAATATCAAAAAGCACCTCCGAG...ACCTTGAGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTTCTTTCTCCTCCCTCTGGGTTCATCCTGACCAATCAGGGTACCCTGAGTGCACCTCCCTGTATGTaGGTTACAGGCATTGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLSPPSGFILTNQGTLSAPPCM*VTGIAP Trigger: TGGGGCAATGCCTGTAACTCACATACAGGGAGGTGC...ACTCAGGGTACCCTGATTGGTCAGGATGAACCCAGAGGGAGGAGAAAGAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTATTCATCTGTCAGTCACCATCACCAGAGTCTTGCTCTCTCAGTCGAGGAGGTCATTGCCAGGGCTGTaGCCCCAAAGGCCTTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PIHLSVTITRVLLSQSRRSLPGL*PQRPFV Trigger: TACAAAAGGCCTTTGGGGGCACAGCCCTGGCAATGA...CCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGGTGACTGACAGATGAATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGGTGGGGGAGGGACCCTCATAGCTTATCATTGCTAATTACTATGGAAGCTCCCACAGATTCCACGTaGTGTGGTGAGGGTGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VRWGRDPHSLSLLITMEAPTDST*CGEGGK Trigger: CTTCCCACCCTCACCACAGCACGTGGAATCTGTGGG...AGCTTCCATAGTAATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CAA 90 bp | GTTCTGCAGCCCGTGCTCTTAACTCTTCTGCAAGCTCTGTTGGGTTaGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTATATATGT | + |
|
Preference number: 2 (lower is better) Translates to: VLQPVLLTLLQALLG*PPSDPSSPPREYIC Trigger: ACATATATACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGCAGAAGAGTTAAGAGCACGGGCTGCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCACCATCACCAGAGTCTTGCTCTCTCAGTCGAGGAGGATGGAGGCTGAGTATGATGCTGTTGACCTaGGCAAGGGCTCTTTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: QSPSPESCSLSRGGWRLSMMLLT*ARALLL Trigger: CAATAAAAGAGCCCTTGCTCAGGTCAACAGCATCAT...ACTCAGCCTCCATCCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGGTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCAGAAAAGTCGCAACCCCAACATTCTGGAGAGGGAAGTACAAACAGCCCCCTGGTCTTCCTTCACTaGTCTCAAAGACTCAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GSEKSQPQHSGEGSTNSPLVFLH*SQRLKV Trigger: GACCTTGAGTCTTTGAGATCAGTGAAGGAAGACCAG...GGGGCTGTTTGTACTTCCCTCTCCAGAATGTTGGGGTTGCGACTTTTCTGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTGAGGGTGGGAAGCTTTCAAACCAGCAATaGAGACACACAAAAGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: AQGTSVPTDSTCCGEGGKLSNQQ*RHTKGF Trigger: AAACCCTTTTGTGTGTCTCCATTGCTGGTTTGAAAG...CTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CAA 90 bp | GGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTaGGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTCATTTATTTA | + |
|
Preference number: 2 (lower is better) Translates to: GQGQAVGSFLVCGYS*GSAEGHSQALFIYL Trigger: TAAATAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTCTTGGCTTCCCTATGTaGCTGGAAACATATGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: SFLVCGYSLGSAEGHSQALGFPM*LETYEP Trigger: TGGTTCATATGTTTCCAGTCACATAGGGAAGCCAAG...AGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCTTGGCCATGGGATGTCCTGCAACCCAACCCTGACACAGCAGGATGGGAAGGTCTGCAGACATCTCTaGAGACTTCACAAGATAACA | + |
|
Preference number: 2 (lower is better) Translates to: NLGHGMSCNPTLTQQDGKVCRHL*RLHKIT Trigger: TGTTATCTTGTGAAGTCTGCAGAGATGTCTGCAGAC...CTTCCCATCCTGCTGTGTCAGGGTTGGGTTGCAGGACATCCCATGGCCAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CAA 90 bp | GCACTGAAAGAGGTGAGGTGGGGGAGGGACCCTCATAGCTTATCATaGCTAATTACTATGGAAGCTGTCAGGAAGCGGTGTCAGTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ALKEVRWGRDPHSLS*LITMEAVRKRCQSK Trigger: TTTAGACTGACACCGCTTCCTGACAGCTTCCATAGTAATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCACCTCTTTCAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCAGGGAGGGACATTCAGATCAGCCAGCAAATGAGGAATTATCAAGGGTTACAGTTCCCGCTTTCCTaGGAGACTGAGAGCACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RAGRDIQISQQMRNYQGLQFPLS*ETESTE Trigger: TTCAGTGCTCTCAGTCTCTCAGGAAAGCGGGAACTG...TAACCCTTGATAATTCCTCATTTGCTGGCTGATCTGAATGTCCCTCCCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCAGGGAGGGACATTCAGATCAGCCAGCAAATGAGGAATTATCAAGGGTTACCTAGCAGGTTCCAGTaGCAACCTTTGTGTGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RAGRDIQISQQMRNYQGLPSRFQ*QPLCAS Trigger: GCTTGCACACAAAGGTTGTCACTGGAACCTGCTAGG...TAACCCTTGATAATTCCTCATTTGCTGGCTGATCTGAATGTCCCTCCCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGCTCTGTTGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTACAAGGGCTCTTTTATTaGGAGAGTTTTTCCTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: ASSVGFAAFRSFQSSQRVQGLFY*ESFSSH Trigger: ATGTGAGGAAAAACTCTCGCAATAAAAGAGCCCTTG...TACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CAA 90 bp | ATGGAGGCCAGTCCCAAGATGGAGTATGATTGGGCTCTCACTGCCTaGGCTTCCCTATGTGACTGGAAACATATGAACCAAATAAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: MEASPKMEYDWALTA*ASLCDWKHMNQINP Trigger: AGGGTTTATTTGGTTCATATGTTTCCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGGGACTGGCCTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR CCA 90 bp | GACATTCAGATCAGCCAGCAAATGAGGAATTATCAAGGGTTAGAGATAAGGGGCGACTCAAGGTCTCCGTaGCTCCTATTCATCTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DIQISQQMRNYQGLEIRGDSRSP*LLFICQ Trigger: CTGACAGATGAATAGGAGCCACGGAGACCTTGAGTC...GCCCCTTATCTCTAACCCTTGATAATTCCTCATTTGCTGGCTGATCTGAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTCATTTAAAGATGGAGTATGATTaGGCTCTCACTGCCTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LWVQLGLCRRSFSGFIHLKMEYD*ALTALA Trigger: AGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTT...TAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGTCTTTATCACAGCTATaGAAATGTCTGCAGACATCT | + |
|
Preference number: 2 (lower is better) Translates to: MGREGGAASNPWQDKILQSLSQL*KCLQTS Trigger: AGATGTCTGCAGACATTTCCATAGCTGTGATAAAGA...CTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR GCA 72 bp | ATTGCCAGGGCTGTGCCCCCAAAGGCCTTTTGTACCTaGCTGCCACTTCGAGCTGATACGTGGCCCGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IARAVPPKAFCT*LPLRADTWPAV Trigger: GACTGCGGGCCACGTATCAGCTCGAAGTGGCAGGCAGGTACAAAAGGCCTTTGGGGGCACAGCCCTGGCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR GCA 72 bp | CTCCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTaGCCCATCAGCCTTCCACCCCCACCCTGGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPGTSLYVSYRH*PISLPPPPWSS Trigger: GGAAGACCAGGGTGGGGGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142405.8 ENSMUST00000149569.9 |
||
| 3UTR TCA 72 bp | AGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTaGGGGTGGGAAGCCCTGGGAGCTACAGAGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RYFCAHRFHVLW*GWEALGATESR Trigger: CCTGCTCTCTGTAGCTCCCAGGGCTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR GCA 72 bp | ACCATGCCCAACAGCAGTGAGGACCAGGCTTCCCCCTaGAGTTGTTGTAGCCAGGGCCAAACCCAGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TMPNSSEDQASP*SCCSQGQTQET Trigger: AGTCTCCTGGGTTTGGCCCTGGCTACAACAACTGCAGGGGGAAGCCTGGTCCTCACTGCTGTTGGGCATGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR GCA 72 bp | TCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTaGTGTGGTGAGGGTGGGAAGCCCTGGGAGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: SAQGTSVPTDST*CGEGGKPWELQ Trigger: CTGTAGCTCCCAGGGCTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR TCA 72 bp | ACAATCTTGGCCATGGGATGTCCTGCAACCCAACCCTaGCACAGCAGGATGGGAAGGGAAGGTGGAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TILAMGCPATQP*HSRMGREGGAA Trigger: GGCTGCTCCACCTTCCCTTCCCATCCTGCTGTGTCAGGGTTGGGTTGCAGGACATCCCATGGCCAAGATTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR TCA 72 bp | AAGACAGGAGACAGGGCAGTCAATCAGCTCAGGACTTaGGGCAGAAGGGGTGAGCCCAGGCTTCTCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTGDRAVNQLRT*GRRGEPRLLSL Trigger: GAGGGAGAGAAGCCTGGGCTCACCCCTTCTGCCTCAAGTCCTGAGCTGATTGACTGCCCTGTCTCCTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CCA 72 bp | GTAACTCTGGCCAAGGACAAGCCGTGGGGTCCTTCCTaGTTTGTGGGTACAGCTTGGGCTCTGCAGAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VTLAKDKPWGPS*FVGTAWALQKV Trigger: GACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCCAGAGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | GGGCAGCAGCTGCACGTCCCATCCTCAGAGCATTTTTaGTCATTGCCAGGGCTGTGCCCCCAAAGGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GQQLHVPSSEHF*SLPGLCPQRPF Trigger: AAAAGGCCTTTGGGGGCACAGCCCTGGCAATGACCAAAAATGCTCTGAGGATGGGACGTGCAGCTGCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAAGCTCTGTTGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGGCAGTCATGAGCTTTTaGGCAGCTGAGGTGACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQALLGLPPSDPSSPPREAVMSF*AAEVTW Trigger: CCACGTCACCTCAGCTGCCAAAAAGCTCATGACTGC...CTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR TCA 72 bp | GGTGTCAGTCTAAAGCCTAGCAGGGGGCTTGTACAGTaGGTGATGGGGGATCCCAGGAGAGTGCTGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GVSLKPSRGLVQ*VMGDPRRVLVM Trigger: CATCACCAGCACTCTCCTGGGATCCCCCATCACTCACTGTACAAGCCCCCTGCTAGGCTTTAGACTGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142405.8 ENSMUST00000149569.9 |
||
| 3UTR GCA 72 bp | CTGCCCCTGAGGTGGAGACAGGAACTTATGACCTCATaGGCTCAATGGTCCCCCTCAGCCCAAGGTACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLRWRQELMTS*AQWSPSAQGTS Trigger: AGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCCTGTCTCCACCTCAGGGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CCA 72 bp | TGGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTaGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: WPRTSRGVLPGL*VQLGLCRRSFS Trigger: TGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | GTCATGAGCTTTTTGGCAGCTGAGGTGACGTGGGGTTaGGTTCTGGTTAGCTGGAGGGCTCGGAGGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VMSFLAAEVTWG*VLVSWRARRCF Trigger: AAAGCACCTCCGAGCCCTCCAGCTAACCAGAACCCAACCCCACGTCACCTCAGCTGCCAAAAAGCTCATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 72 bp | GCCTTTTGTACCTGCCTGCCACTTCGAGCTGATACGTaGCCCGCAGTCATGAGCTTTTTGGCAGCTGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AFCTCLPLRADT*PAVMSFLAAEV Trigger: CACCTCAGCTGCCAAAAAGCTCATGACTGCGGGCCACGTATCAGCTCGAAGTGGCAGGCAGGTACAAAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCAGAAAAGTCGCAACCCCAACATTCTGGAGAGGGAAGTACAAACAGCCCCAGAACGCAGGAAGTCTaGTGTGGGTGGGCCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSEKSQPQHSGEGSTNSPRTQEV*CGWATV Trigger: GACTGTGGCCCACCCACACAAGACTTCCTGCGTTCT...GGGGCTGTTTGTACTTCCCTCTCCAGAATGTTGGGGTTGCGACTTTTCTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CCA 72 bp | GCAGCTGAGGTGACGTGGGGTTGGGTTCTGGTTAGCTaGAGGGCTCGGAGGTGCTTTTTGATATTATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AAEVTWGWVLVS*RARRCFLILSQ Trigger: CTGGGATAATATCAAAAAGCACCTCCGAGCCCTCCAGCTAACCAGAACCCAACCCCACGTCACCTCAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 72 bp | AGGTGGAGACAGGAACTTATGACCTCATGCGCTCAATaGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RWRQELMTSCAQ*SPSAQGTSVPT Trigger: TGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCCTGTCTCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGGAGTGGGCTCTCACTGCCTaGGCTTCCCTATGTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GREGGAASNPWQDKILQEWALTA*ASLCDW Trigger: CCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCA...CTCCTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR TCA 72 bp | CATCAGCCTTCCACCCCCACCCTGGTCTTCCTTCACTaGTCTCAAAGACTCAAGGTCTCCGTGGCTCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: HQPSTPTLVFLH*SQRLKVSVAPI Trigger: AATAGGAGCCACGGAGACCTTGAGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142405.8 ENSMUST00000149569.9 |
||
| 3UTR TCA 72 bp | CCTCCTTCCCCTGGAATCTGGCCTAGCAGGTTCCAGTaGCAACCTTTGTGTGCAAGCATGGCTCTGAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: PPSPGIWPSRFQ*QPLCASMALRQ Trigger: TTGTCTCAGAGCCATGCTTGCACACAAAGGTTGTCACTGGAACCTGCTAGGCCAGATTCCAGGGGAAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CCA 72 bp | GACAGCCTGAGAAGAAAGAACGCAGGAAGTCTTGTGTaGGTGGGCCACAGTCCCAAACCTCCTGTGCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: DSLRRKNAGSLV*VGHSPKPPVQF Trigger: GAATTGCACAGGAGGTTTGGGACTGTGGCCCACCCACACAAGACTTCCTGCGTTCTTTCTTCTCAGGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGTGGGGGAGGGACCCTCATAGCTTATCATTGCTAATTACTATGGAAGCTGCCCCCAAAGGCCTTTaGTACCTGCCTGCCACTTCG | + |
|
Preference number: 3 (lower is better) Translates to: VRWGRDPHSLSLLITMEAAPKGL*YLPATS Trigger: CGAAGTGGCAGGCAGGTACAAAAGGCCTTTGGGGGC...AGCTTCCATAGTAATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTCATCTGTCAGTCACCATCACCAGAGTCTTGCTCTCTCAGTCGAGGAGGGAGCATTTTTGGTCATaGCCAGGGCTGTGCCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PIHLSVTITRVLLSQSRREHFWS*PGLCPQ Trigger: TTGGGGGCACAGCCCTGGCAATGACCAAAAATGCTC...CCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGGTGACTGACAGATGAATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR TCA 72 bp | CAGAGTCTTGCTCTCTCAGTCGAGGAGGATGGAGGCTaGGTCACCTTGTTTCCTTTCAAAGAGGACCTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QSLALSVEEDGG*VTLFPFKEDLA Trigger: CGCAAGGTCCTCTTTGAAAGGAAACAAGGTGACTCAGCCTCCATCCTCCTCGACTGAGAGAGCAAGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR GCA 72 bp | AGTATATATGTCCTGGCCAAGGGAGAGGGCAGCAGCTaGACGTCCCATCCTCAGAGCATTTTTGGTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: SIYVLAKGEGSS*TSHPQSIFGHC Trigger: GCAATGACCAAAAATGCTCTGAGGATGGGACGTGCAGCTGCTGCCCTCTCCCTTGGCCAGGACATATATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 72 bp | AGACATCTCTGCAGACTTCACAAGATAACATCGACATaGCTCTACAGATCCCAGCTGAAGCCTCCAGGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RHLCRLHKITST*LYRSQLKPPGG Trigger: CCCGCCTGGAGGCTTCAGCTGGGATCTGTAGAGCCATGTCGATGTTATCTTGTGAAGTCTGCAGAGATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | AAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTaGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KPWGPSWFVGTA*ALQKVILRLYS Trigger: TGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGGAGTTTGTGGGTACAGCTaGGGCTCTGCAGAAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GKGRWSSLKPLAGQNFTGVCGYS*GSAEGH Trigger: ATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAAC...TCCTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | TTTAAGATGGAGGCCAGTCCCAAGATGGAGTATGATTaGGCTCTCACTGCCTTGGCTTCCCTATGTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FKMEASPKMEYD*ALTALASLCDW Trigger: CCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGGGACTGGCCTCCATCTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR TCA 72 bp | TGTTTCCTTTCAAAGAGGACCTTGCGGCCTCTTTGCTaGGTCTCTGCAGCTTTCTGTAGCGACAGGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CFLSKRTLRPLC*VSAAFCSDRCV Trigger: AACACACCTGTCGCTACAGAAAGCTGCAGAGACTCAGCAAAGAGGCCGCAAGGTCCTCTTTGAAAGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 72 bp | AGGATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTaGCAGGACAAAATTTTACAGGAGAATAGGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RMGREGGAASNP*QDKILQENRSK Trigger: CTTGCTCCTATTCTCCTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR GCA 72 bp | ATTAAGGTTTATTACAATCTTGGCCATGGGATGTCCTaGAACCCAACCCTGACACAGCAGGATGGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IKVYYNLGHGMS*NPTLTQQDGKG Trigger: TCCCTTCCCATCCTGCTGTGTCAGGGTTGGGTTGCAGGACATCCCATGGCCAAGATTGTAATAAACCTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | TCTTCCTTCACTGATCTCAAAGACTCAAGGTCTCCGTaGCTCCTATTCATCTGTCAGTCACCATCACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSFTDLKDSRSP*LLFICQSPSPE Trigger: CTCTGGTGATGGTGACTGACAGATGAATAGGAGCCACGGAGACCTTGAGTCTTTGAGATCAGTGAAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| 3UTR CCA 72 bp | TTTCCTGAGAGACTGAGAGCACTGAAAGAGGTGAGGTaGGGGAGGGACCCTCATAGCTTATCATTGCTAATT | + |
|
Preference number: 3 (lower is better) Translates to: FPERLRALKEVR*GRDPHSLSLLI Trigger: AATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCACCTCTTTCAGTGCTCTCAGTCTCTCAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR GCA 72 bp | GGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTaGAGAAGGTCATTCTCAGGCTTTATTCATTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: GVLPGLWVQLGL*RRSFSGFIHLF Trigger: AAATAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR GCA 72 bp | CTTTATCACAGCTATGGAAATGTCTGCAGACATCTCTaGAGACTTCACAAGATAACATCGACATGGCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LYHSYGNVCRHL*RLHKITSTWLY Trigger: GTAGAGCCATGTCGATGTTATCTTGTGAAGTCTGCAGAGATGTCTGCAGACATTTCCATAGCTGTGATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | GATTGGGCTCTCACTGCCTTGGCTTCCCTATGTGACTaGAAACATATGAACCAAATAAACCCTTTTGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: DWALTALASLCD*KHMNQINPFDH Trigger: ATGATCAAAAGGGTTTATTTGGTTCATATGTTTCCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CCA 72 bp | TTCTCAGGCTTTATTCATTTATTTATCTCTTTAAGATaGAGGCCAGTCCCAAGATGGAGTATGATTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSGFIHLFISLR*RPVPRWSMIGL Trigger: GAGCCCAATCATACTCCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAATAAATGAATAAAGCCTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR GCA 72 bp | TTTGATCATAGTCTTTATCACAGCTATGGAAATGTCTaGAGACATCTCTGCAGACTTCACAAGATAACATCG | + |
|
Preference number: 3 (lower is better) Translates to: FDHSLYHSYGNV*RHLCRLHKITS Trigger: CGATGTTATCTTGTGAAGTCTGCAGAGATGTCTGCAGACATTTCCATAGCTGTGATAAAGACTATGATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTGAGGGTGGGAAGCATGCCCAACAGCAGTaGGGACCAGGCTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQGTSVPTDSTCCGEGGKHAQQQ*GPGFPL Trigger: CAGGGGGAAGCCTGGTCCTCACTGCTGTTGGGCATG...CTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTGAGGGTGGGAAGGGTGACCCCGGCAACTaGCCCCAAACCATGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQGTSVPTDSTCCGEGGKGDPGN*PQTMPN Trigger: GTTGGGCATGGTTTGGGGGCAGTTGCCGGGGTCACC...CTTCCCACCCTCACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTACCCCCTCCAGCTCCTaGTCGCTGTTAGGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: GQGQAVGSFLVCGYSLGSTPSSS*SLLGMM Trigger: CATCATGCCTAACAGCGACCAGGAGCTGGAGGGGGT...AGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CAA 72 bp | ACTCCCTGGCACCTCCCTGTATGTGAGTTACAGGCATaGCCCCATCAGCCTTCCACCCCCACCCTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPWHLPVCELQA*PHQPSTPTLVF Trigger: GAAGACCAGGGTGGGGGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142405.8 ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | GCTCAATGGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCACTGCCCCCAAACCATaGCCAACAGCAGTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AQWSPSAQGTSVPTDSTCTAPKP*PTAVRT Trigger: GGTCCTCACTGCTGTTGGGCATGGTTTGGGGGCAGT...GCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGTACAGTGAGTGATGGGGGATCCCAGGAGAGTGCTGGTGATGGCTGGGTCACCCCCTCCAGCTCCTaGTCGCTGTTAGGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: ACTVSDGGSQESAGDGWVTPSSS*SLLGMM Trigger: CATCATGCCTAACAGCGACCAGGAGCTGGAGGGGGT...GACCCAGCCATCACCAGCACTCTCCTGGGATCCCCCATCACTCACTGTACAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTGTTGCGGCCTCTTTGCTaGGTCTCTGCAGCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPPQPKVLLCPQIPRAVVLRPLC*VSAAFC Trigger: ACAGAAAGCTGCAGAGACTCAGCAAAGAGGCCGCAA...CACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | GACCCTGGGGAACTCCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTGCCCCTCATTGCCAGGGCTGTaGCCCCAAAGGCCTTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DPGELPGTSLYVSYRHCPSLPGL*PQRPFV Trigger: TACAAAAGGCCTTTGGGGGCACAGCCCTGGCAATGA...GGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGGAGTTCCCCAGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCTGTGGTGCTGATGGCTCGGGGTTaGAGTTTGCACCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPPQPKVLLCPQIPRAVVLMARG*SLHQSH Trigger: ATGGCTTTGGTGCAAACTCCAACCCCGAGCCATCAG...CACCACAGCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| 3UTR CAA 72 bp | CTCTGGCCAAGGACAAGCCGTGGGGTCCTTCCTGGTTaGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LWPRTSRGVLPG*WVQLGLCRRSF Trigger: GAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTGGCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CAA 72 bp | AGGGCAGCAGCTGCACGTCCCATCCTCAGAGCATTTTaGGTCATTGCCAGGGCTGTGCCCCCAAAGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAAAARPILRAF*VIARAVPPKAF Trigger: AAAGGCCTTTGGGGGCACAGCCCTGGCAATGACCAAAAATGCTCTGAGGATGGGACGTGCAGCTGCTGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAGATGGAGTATGATTGGGCTCTCACTGCCTTGGCTTCCCTATGTGACTGGTCGTCTTCTCTCCCTTaGCCCCCTCCAGCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKMEYDWALTALASLCDWSSSLP*PPPAPG Trigger: ACCAGGAGCTGGAGGGGGTCAAGGGAGAGAAGACGA...CCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGGGGTGACCCCGGCAACTaGCCCCAAACCATGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WEGKVEQPQTLGRTKFYRGDPGN*PQTMPN Trigger: GTTGGGCATGGTTTGGGGGCAGTTGCCGGGGTCACC...CCTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTTATGACCTCATGCGCTCAATGGTCCCCCTCAGCCCAAGGTACTTCTGTGACTCCAGAGGCGACTaGTGCAGAGGTAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTYDLMRSMVPLSPRYFCDSRGD*CRGSHH Trigger: GTGGTGACTACCTCTGCATCAGTCGCCTCTGGAGTC...ACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGCATGCCCAACAGCAGTaGGGACCAGGCTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGREGGAASNPWQDKILQHAQQQ*GPGFPL Trigger: CAGGGGGAAGCCTGGTCCTCACTGCTGTTGGGCATG...CTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGCTCGGAGGTGCTTTTTaGTATTATCCCAGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDKPWGPSWFVGTAWALQLGGAF*YYPRRS Trigger: GGAACGCCTGGGATAATATCAAAAAGCACCTCCGAG...CTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CAA 72 bp | CCCGTGCTCTTAACTCTTCTGCAAGCTCTGTTGGGTTaGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLTLLQALLG*PPSDPSSPPRE Trigger: CTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGCAGAAGAGTTAAGAGCACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGGAGGACTCCAGAGGCGACTaGTGCAGAGGTAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GREGGAASNPWQDKILQEDSRGD*CRGSHH Trigger: GTGGTGACTACCTCTGCATCAGTCGCCTCTGGAGTC...CTCCTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCATCAGCCTTCCACCCCCACCCTGGTCTTCCTTCACTGATCTCAAAGACTCTCGGAGGTGCTTTTTaGTATTATCCCAGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APSAFHPHPGLPSLISKTLGGAF*YYPRRS Trigger: GGAACGCCTGGGATAATATCAAAAAGCACCTCCGAG...AGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGATGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGACAGGGCAGTCAATCAGCTCAGGACTTGAGGCAGAAGGGGTGAGCCCATTTCAAAGAGGACCTTaGGGCCTCTTTGCTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QETGQSISSGLEAEGVSPFQRGP*GLFAES Trigger: AGACTCAGCAAAGAGGCCGCAAGGTCCTCTTTGAAA...TGGGCTCACCCCTTCTGCCTCAAGTCCTGAGCTGATTGACTGCCCTGTCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCCAAGATGGAGTATGATTGGGCTCTCACTGCCTTGGCTTCCCTATGTGGCAAGAACAAGGCCCTaGGATCAGTCCTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVPRWSMIGLSLPWLPYVARTRP*DQSSAP Trigger: TGGAGCTGAGGACTGATCCCAGGGCCTTGTTCTTGC...CACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGGGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| 3UTR CAA 72 bp | CAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTaGGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: QAVGSFLVCGYS*GSAEGHSQALF Trigger: GAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGGTGGGGGAGGGACCCTCATAGCTTATCATTGCTAATTACTATGGAAGCTTCGTCTTCTCTCCCTTaGCCCCCTCCAGCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRWGRDPHSLSLLITMEASSSLP*PPPAPG Trigger: ACCAGGAGCTGGAGGGGGTCAAGGGAGAGAAGACGA...AGCTTCCATAGTAATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGACAGGGCAGTCAATCAGCTCAGGACTTGAGGCAGAAGGGGTGAGCCCATTCGTCAATGTGGTCTaGGATAGCATAGAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QETGQSISSGLEAEGVSPFVNVV*DSIERS Trigger: AGAACGCTCTATGCTATCGCAGACCACATTGACGAA...TGGGCTCACCCCTTCTGCCTCAAGTCCTGAGCTGATTGACTGCCCTGTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTTCATTGCCAGGGCTGTaGCCCCAAAGGCCTTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFLVCGYSLGSAEGHSQASLPGL*PQRPFV Trigger: TACAAAAGGCCTTTGGGGGCACAGCCCTGGCAATGA...AGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGGCAGCTGAGGTGACGTaGGGTTGGGTTCTGGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MGREGGAASNPWQDKILQAAEVT*GWVLVS Trigger: GCTAACCAGAACCCAACCCCACGTCACCTCAGCTGC...CTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CCA 90 bp | CCTATTCATCTGTCAGTCACCATCACCAGAGTCTTGCTCTCTCAGTCGAGGAGGCTGATGGCTCGGGGTTaGAGTTTGCACCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHLSVTITRVLLSQSRRLMARG*SLHQSH Trigger: ATGGCTTTGGTGCAAACTCCAACCCCGAGCCATCAG...CCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGGTGACTGACAGATGAATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTGGCCATGGGATGTCCTGCAACCCAACCCTGACACAGCAGGATGGGAAGTTCGTCAATGTGGTCTaGGATAGCATAGAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLGHGMSCNPTLTQQDGKFVNVV*DSIERS Trigger: AGAACGCTCTATGCTATCGCAGACCACATTGACGAA...CTTCCCATCCTGCTGTGTCAGGGTTGGGTTGCAGGACATCCCATGGCCAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTCATTTAACTGCCCCCAAACCATaGCCAACAGCAGTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LWVQLGLCRRSFSGFIHLTAPKP*PTAVRT Trigger: GGTCCTCACTGCTGTTGGGCATGGTTTGGGGGCAGT...TAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR GCA 90 bp | GGTACTGCCTACCTGCCCCTGAGGTGGAGACAGGAACTTATGACCTCATGCGCTCAAGGGCTCTTTTATTaGGAGAGTTTTTCCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GTAYLPLRWRQELMTSCAQGLFY*ESFSSH Trigger: ATGTGAGGAAAAACTCTCGCAATAAAAGAGCCCTTG...AGCGCATGAGGTCATAAGTTCCTGTCTCCACCTCAGGGGCAGGTAGGCAGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCAAACCAGCAATGGAGACACACAAAAGGGTTTTTAAGACAGGAGACAGGGGCAGCTGAGGTGACGTaGGGTTGGGTTCTGGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSNQQWRHTKGFLRQETGAAEVT*GWVLVS Trigger: GCTAACCAGAACCCAACCCCACGTCACCTCAGCTGC...CCCTGTCTCCTGTCTTAAAAACCCTTTTGTGTGTCTCCATTGCTGGTTTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR TCA 90 bp | ATTCAGATCAGCCAGCAAATGAGGAATTATCAAGGGTTAGAGATAAGGGGCTCATTTTGGCAGCTGAGGTaGCGTGGGGTTGGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQISQQMRNYQGLEIRGSFWQLR*RGVGFW Trigger: CCAGAACCCAACCCCACGTCACCTCAGCTGCCAAAA...TGAGCCCCTTATCTCTAACCCTTGATAATTCCTCATTTGCTGGCTGATCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTATATATGTCCTGGCCAATTCGTCAATGTGGTCTaGGATAGCATAGAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSDPSSPPREYICPGQFVNVV*DSIERS Trigger: AGAACGCTCTATGCTATCGCAGACCACATTGACGAA...TTGGCCAGGACATATATACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGATGATGCTGTTGACCTaGGCAAGGGCTCTTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: MGREGGAASNPWQDKILQMMLLT*ARALLL Trigger: CAATAAAAGAGCCCTTGCTCAGGTCAACAGCATCAT...CTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTTATCTCTTTAAGATGGAGGCCAGTCCCAAGATGGAGTATGATTGGGCTTTTTGGCAGCTGAGGTaGCGTGGGGTTGGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIYLFKMEASPKMEYDWAFWQLR*RGVGFW Trigger: CCAGAACCCAACCCCACGTCACCTCAGCTGCCAAAA...AGCCCAATCATACTCCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGATGGAGTATGATTGGGCTCTCACTGCCTTGGCTTCCCTATGTGACTGGACAAGGGCTCTTTTATTaGGAGAGTTTTTCCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PRWSMIGLSLPWLPYVTGQGLFY*ESFSSH Trigger: ATGTGAGGAAAAACTCTCGCAATAAAAGAGCCCTTG...TCCAGTCACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTTTATTCATTTATTTATCTCTTTAAGATGGAGGCCAGTCCCAAGATGGCTGATGGCTCGGGGTTaGAGTTTGCACCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGFIHLFISLRWRPVPRWLMARG*SLHQSH Trigger: ATGGCTTTGGTGCAAACTCCAACCCCGAGCCATCAG...CCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAATAAATGAATAAAGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTTATCTCTTTAAGATGGAGGCCAGTCCCAAGATGGAGTATGATTGGGCTAGCTCAGTGGTAGAGTaGTTGCCTAGCAAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIYLFKMEASPKMEYDWASSVVE*LPSKNK Trigger: CTTGTTCTTGCTAGGCAAGCACTCTACCACTGAGCT...AGCCCAATCATACTCCATCTTGGGACTGGCCTCCATCTTAAAGAGATAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGCACCTCCCTGTATGTGAGTTACAGGCATTGCCCCATCAGCCTTCCACCGCCCCCAAAGGCCTTTaGTACCTGCCTGCCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PWHLPVCELQALPHQPSTAPKGL*YLPATS Trigger: CGAAGTGGCAGGCAGGTACAAAAGGCCTTTGGGGGC...GGTGGAAGGCTGATGGGGCAATGCCTGTAACTCACATACAGGGAGGTGCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGCAGTCATGAGCTTTTaGGCAGCTGAGGTGACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGQAVGSFLVCGYSLGSAAVMSF*AAEVTW Trigger: CCACGTCACCTCAGCTGCCAAAAAGCTCATGACTGC...TGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | TCACCATCACCAGAGTCTTGCTCTCTCAGTCGAGGAGGATGGAGGCTGAGTCACTCTGATGGCTCGGGGTaGGAGTTTGCACCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSPESCSLSRGGWRLSHSDGSG*EFAPKP Trigger: TGGCTTTGGTGCAAACTCCAACCCCGAGCCATCAGA...GTGACTCAGCCTCCATCCTCCTCGACTGAGAGAGCAAGACTCTGGTGATGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAATGGTCCCCCTCAGCCCAAGGTACTTCTGTGCCCACAGATTCCACGTGCGCTCGGAGGTGCTTTTaGATATTATCCCAGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQWSPSAQGTSVPTDSTCARRCF*ILSQAF Trigger: GAACGCCTGGGATAATATCAAAAAGCACCTCCGAGC...GCACGTGGAATCTGTGGGCACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CAA 90 bp | GGAACTTATGACCTCATGCGCTCAATGGTCCCCCTCAGCCCAAGGTACTTCTGTTCTGATGGCTCGGGGTaGGAGTTTGCACCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTYDLMRSMVPLSPRYFCSDGSG*EFAPKP Trigger: TGGCTTTGGTGCAAACTCCAACCCCGAGCCATCAGA...ACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTCCACCCCCACCCTGGTCTTCCTTCACTGATCTCAAAGACTCAAGGTGACCTTGCGGCCTCTTaGCTGAGTCTCTGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SAFHPHPGLPSLISKTQGDLAAS*LSLCSF Trigger: AAAGCTGCAGAGACTCAGCAAAGAGGCCGCAAGGTC...ACCTTGAGTCTTTGAGATCAGTGAAGGAAGACCAGGGTGGGGGTGGAAGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS TCA 90 bp | TGTAGCCAGGGCCAAACCCAGGAGACTCAGGACTCCAGAGGCGACTaGTGCAGAGGTAGTCACCACTTTGATCTTGGTAGCTTTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSQGQTQETQDSRGD*CRGSHHFDLGSFLV Trigger: CACCAAAAAGCTACCAAGATCAAAGTGGTGACTACCTCTGCATCAGTCGCCTCTGGAGTCCTGAGTCTCCTGGGTTTGGCCCTGGCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000127957.8 ENSMUST00000149569.9 ENSMUST00000152949.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGACAAGCCGTGGGGTCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGATCTTGGTAGCTTTTaGGTGGCTTTCGTCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGQAVGSFLVCGYSLGSADLGSF*VAFVNV Trigger: CACATTGACGAAAGCCACCAAAAAGCTACCAAGATC...TGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGACCCCACGGCTTGTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAAGGGAAGGTGGAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGTCTGATGGCTCGGGGTaGGAGTTTGCACCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MGREGGAASNPWQDKILQSDGSG*EFAPKP Trigger: TGGCTTTGGTGCAAACTCCAACCCCGAGCCATCAGA...CTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTCCACCTTCCCTTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTTGCTCGGAGGTGCTTTTaGATATTATCCCAGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSWFVGTAWALQKVILRLARRCF*ILSQAF Trigger: GAACGCCTGGGATAATATCAAAAAGCACCTCCGAGC...AAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | TCGCAACCCCAACATTCTGGAGAGGGAAGTACAAACAGCCCCCTTTCTTCTTTCGCAGTCATGAGCTTTTaGGCAGCTGAGGTGACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPQHSGEGSTNSPLSSFAVMSF*AAEVTW Trigger: CCACGTCACCTCAGCTGCCAAAAAGCTCATGACTGC...GAAAGAAGAAAGGGGGCTGTTTGTACTTCCCTCTCCAGAATGTTGGGGTTGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCCTCAAACCCTTGGCAGGACAAAATTTTACAGGAGAATAGGAGCAAGTGCCCCCAAAGGCCTTTaGTACCTGCCTGCCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EQPQTLGRTKFYRRIGASAPKGL*YLPATS Trigger: CGAAGTGGCAGGCAGGTACAAAAGGCCTTTGGGGGC...ACTTGCTCCTATTCTCCTGTAAAATTTTGTCCTGCCAAGGGTTTGAGGCTGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCTTTCTCCTCCCTCTGGGTTCATCCTGACCAATCAGGGTACCCTGAGTGAGCATTTTTGGTCATaGCCAGGGCTGTGCCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLLSPPSGFILTNQGTLSEHFWS*PGLCPQ Trigger: TTGGGGGCACAGCCCTGGCAATGACCAAAAATGCTC...ACTCAGGGTACCCTGATTGGTCAGGATGAACCCAGAGGGAGGAGAAAGAAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGCTCTGTTGGGTTTGCCGCCTTCAGATCCTTCCAGTCCTCCCAGAGAGTAGATCTTGGTAGCTTTTaGGTGGCTTTCGTCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSVGFAAFRSFQSSQRVDLGSF*VAFVNV Trigger: CACATTGACGAAAGCCACCAAAAAGCTACCAAGATC...TACTCTCTGGGAGGACTGGAAGGATCTGAAGGCGGCAAACCCAACAGAGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142405.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCTGGTTTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTGTCACCACTTTGATCTaGGTAGCTTTTTGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLVCGYSLGSAEGHSQAVTTLI*VAFWWL Trigger: AAGCCACCAAAAAGCTACCAAGATCAAAGTGGTGAC...AGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAAACCAGGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCCAAGATGGAGTATGATTGGGCTCTCACTGCCTTGGCTTCCCTATGTGGAGGTAGTCACCACTTaGATCTTGGTAGCTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVPRWSMIGLSLPWLPYVEVVTT*ILVAFW Trigger: CCAAAAAGCTACCAAGATCAAAGTGGTGACTACCTC...CACATAGGGAAGCCAAGGCAGTGAGAGCCCAATCATACTCCATCTTGGGACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTTATGACCTCATGCGCTCAATGGTCCCCCTCAGCCCAAGGTACTTCTGTGAGGTAGTCACCACTTaGATCTTGGTAGCTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTYDLMRSMVPLSPRYFCEVVTT*ILVAFW Trigger: CCAAAAAGCTACCAAGATCAAAGTGGTGACTACCTC...ACAGAAGTACCTTGGGCTGAGGGGGACCATTGAGCGCATGAGGTCATAAGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTACAGCTTGGGCTCTGCAGAAGGTCATTCTCAGGCTTTATTCATTTAGAGCATTTTTGGTCATaGCCAGGGCTGTGCCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LWVQLGLCRRSFSGFIHLEHFWS*PGLCPQ Trigger: TTGGGGGCACAGCCCTGGCAATGACCAAAAATGCTC...TAAATGAATAAAGCCTGAGAATGACCTTCTGCAGAGCCCAAGCTGTACCCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127957.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGGTGGGGGAGGGACCCTCATAGCTTATCATTGCTAATTACTATGGAAGCTGTCACCACTTTGATCTaGGTAGCTTTTTGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRWGRDPHSLSLLITMEAVTTLI*VAFWWL Trigger: AAGCCACCAAAAAGCTACCAAGATCAAAGTGGTGAC...AGCTTCCATAGTAATTAGCAATGATAAGCTATGAGGGTCCCTCCCCCACCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149569.9 |
||
| CDS TCA 72 bp | GGCCAAACCCAGGAGACTCAGGACTCCAGAGGCGACTaGTGCAGAGGTAGTCACCACTTTGATCTTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GQTQETQDSRGD*CRGSHHFDLGS Trigger: GCTACCAAGATCAAAGTGGTGACTACCTCTGCATCAGTCGCCTCTGGAGTCCTGAGTCTCCTGGGTTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127957.8 ENSMUST00000149569.9 ENSMUST00000152949.2 |
||