Pregenerated sensors for APOBR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042759Ensembl transcript IDs: ENSMUST00000039522.8, ENSMUST00000131860.2, ENSMUST00000137646.8, ENSMUST00000138558.3, ENSMUST00000144173.2
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACCCAGGGAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCCTaGGGCACCTGCCGTGGCCTCAGCCGATTCCAAGGGCCCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GPREQGLIPVAVNIP*GTCRGLSRFQGPRH Trigger: GTGCCTGGGCCCTTGGAATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCTGGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 90 bp | CAGAGACATCCAGGCGGGACCCAGGGAGCAGGGCCTCATTCCAGTTaGTGTGAACATCCCCTGGGGCACCTGCCGTGGCCTCAGCCGATT | + |
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Preference number: 1 (lower is better) Translates to: QRHPGGTQGAGPHSS*CEHPLGHLPWPQPI Trigger: AATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCTGGGTCCCGCCTGGATGTCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 90 bp | GAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCCTGGGGCACCTaGCGTGGCCTCAGCCGATTCCAAGGGCCCAGGCACAGCTACTGT | + |
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Preference number: 1 (lower is better) Translates to: EQGLIPVAVNIPWGT*RGLSRFQGPRHSYC Trigger: ACAGTAGCTGTGCCTGGGCCCTTGGAATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 90 bp | CTGCCGTGGCCTCAGCCGATTCCAAGGGCCCAGGCACAGCTACTGTaGGGATTTGGTGTGTCTGCTGCCCCTCCTGGTCTGAAGAGTCGT | + |
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Preference number: 1 (lower is better) Translates to: LPWPQPIPRAQAQLL*GFGVSAAPPGLKSR Trigger: ACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGGGCCCTTGGAATCGGCTGAGGCCACGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 90 bp | TCCAAGGGCCCAGGCACAGCTACTGTGGGGATTTGGTGTGTCTGCTaGCCCTCCTGGTCTGAAGAGTCGTCCAGCGTTTGGATCTCGCCC | + |
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Preference number: 1 (lower is better) Translates to: SKGPGTATVGIWCVC*PSWSEESSSVWISP Trigger: GGGCGAGATCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGGGCCCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 90 bp | GCCTCAGCCGATTCCAAGGGCCCAGGCACAGCTACTGTGGGGATTTaGTGTGTCTGCTGCCCCTCCTGGTCTGAAGAGTCGTCCAGCGTT | + |
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Preference number: 1 (lower is better) Translates to: ASADSKGPGTATVGI*CVCCPSWSEESSSV Trigger: AACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGGGCCCTTGGAATCGGCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 90 bp | TGGTCTGAAGAGTCGTCCAGCGTTTGGATCTCGCCCTCTGAGTTGTaGACCTTCTGCTCTCGCGACTGCCCTCCCCCAGCCTCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: WSEESSSVWISPSEL*TFCSRDCPPPASSS Trigger: GGAAGAAGAGGCTGGGGGAGGGCAGTCGCGAGAGCAGAAGGTCCACAACTCAGAGGGCGAGATCCAAACGCTGGACGACTCTTCAGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 90 bp | TGGTGTGTCTGCTGCCCCTCCTGGTCTGAAGAGTCGTCCAGCGTTTaGATCTCGCCCTCTGAGTTGTGGACCTTCTGCTCTCGCGACTGC | + |
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Preference number: 1 (lower is better) Translates to: WCVCCPSWSEESSSV*ISPSELWTFCSRDC Trigger: GCAGTCGCGAGAGCAGAAGGTCCACAACTCAGAGGGCGAGATCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 90 bp | GATTCCAAGGGCCCAGGCACAGCTACTGTGGGGATTTGGTGTGTCTaGTGCCCCTCCTGGTCTGAAGAGTCGTCCAGCGTTTGGATCTCG | + |
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Preference number: 1 (lower is better) Translates to: DSKGPGTATVGIWCV*CPSWSEESSSVWIS Trigger: CGAGATCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGGGCCCTTGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 90 bp | CCAGGCACAGCTACTGTGGGGATTTGGTGTGTCTGCTGCCCCTCCTaGTCTGAAGAGTCGTCCAGCGTTTGGATCTCGCCCTCTGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: PGTATVGIWCVCCPS*SEESSSVWISPSEL Trigger: CAACTCAGAGGGCGAGATCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 90 bp | GGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTaGAGTTCCTGGGCAACGTTCCCCAACTCTGGCATGGAGGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: GKLPATQNPSLLLCA*SSWATFPNSGMEVS Trigger: GCTAACCTCCATGCCAGAGTTGGGGAACGTTGCCCAGGAACTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 90 bp | AAACTCAAAGCAACTGATCTGTTGCCGGTGGCCGTGGACTCCAAGTaGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: KLKATDLLPVAVDSK*CPLLSPLNLFPLGW Trigger: CCAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCACGGCCACCGGCAACAGATCAGTTGCTTTGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR GCA 90 bp | TGGGCAACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTaGAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: WATFPNSGMEVSIVT*RAVIPSRHFGNSKQ Trigger: TTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGTTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR TCA 90 bp | AATCAGACTCCTAGATTCAAGGTCTTCATAAATATCCAGTTTAGCTaGGGCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: NQTPRFKVFINIQFS*GREGEKIYSSGRGT Trigger: AGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGCCTCAGCTAAACTGGATATTTATGAAGACCTTGAATCTAGGAGTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTGGGGCACCTGCCGTGGCCTCAGCCGATTCCAAGGGCCCAGGCACAGCTTCTTCCAACAGCATCTaGTCTCTTAGGAGCCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPGAPAVASADSKGPGTASSNSI*SLRSPS Trigger: TGAGGGGCTCCTAAGAGATCAGATGCTGTTGGAAGA...AGCTGTGCCTGGGCCCTTGGAATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCAGGCGGGACCCAGGGAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCTTCTGCTCTCGCGACTaGCCTCCCCCAGCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HPGGTQGAGPHSSCCEHPFCSRD*PPPASS Trigger: AGAAGAGGCTGGGGGAGGGCAGTCGCGAGAGCAGAA...GGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCTGGGTCCCGCCTGGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCAGGCGGGACCCAGGGAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCGCTACTGTGGGGATTTaGTGTGTCTGCTGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HPGGTQGAGPHSSCCEHPATVGI*CVCCPS Trigger: GGAGGGGCAGCAGACACACCAAATCCCCACAGTAGC...GGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCTGGGTCCCGCCTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCCTGGGGCACCTGCCGTGGGATTTGGTGTGTCTaGTGCCCCTCCTGGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: REQGLIPVAVNIPWGTCRGIWCV*CPSWSE Trigger: TTCAGACCAGGAGGGGCAGCAGACACACCAAATCCC...ACGGCAGGTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CAA 90 bp | TTGCCGGTGGCCGTGGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTaGAACCTCTTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPVAVDSKWCPLLSP*NLFPLGWFPPQKCA Trigger: AGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCACGGCCACCGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CAA 90 bp | GCAACTGATCTGTTGCCGGTGGCCGTGGACTCCAAGTGGTGTCCCTaGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCTGGTTTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: ATDLLPVAVDSKWCP*LSPLNLFPLGWFPP Trigger: GGGTGGAAACCAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCACGGCCACCGGCAACAGATCAGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTGGAGAGCCTTCCGAGTAGCTaGGACAGATGTGAAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: EGEASSHTEPLSTPMCLESLPSS*DRCERA Trigger: TGCCCTTTCACATCTGTCTCAGCTACTCGGAAGGCT...CTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CAA 90 bp | GACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTaGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTACACGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: DSKWCPLLSPLNLFP*GWFPPQKCAILHAS Trigger: GCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTGGAGGTTAGCATAGTAACCTaGAGAGCTGTGATACCGAGC | + |
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Preference number: 2 (lower is better) Translates to: EGEASSHTEPLSTPMCLEVSIVT*RAVIPS Trigger: GCTCGGTATCACAGCTCTGCAGGTTACTATGCTAAC...CTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCGGTCTTATCTCACATTaGGTGGCAGGTGAGCATACT | + |
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Preference number: 2 (lower is better) Translates to: VDSKWCPLLSPLNLFPLGGLISH*VAGEHT Trigger: AGTATGCTCACCTGCCACCCAATGTGAGATAAGACC...GCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CAA 90 bp | GTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTaGTGTTTCCACATCTTTTCACAGGAAGGTCTGACACCCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VRPPCWVPNKAIQPG*CFHIFSQEGLTPKE Trigger: TTCCTTGGGTGTCAGACCTTCCTGTGAAAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCAATATCCAGTTTAGCTaGGGCCGGGAGGGTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: CFTLELGHHAGCLIKPSSNIQFS*GREGEK Trigger: CTTTTCACCCTCCCGGCCTCAGCTAAACTGGATATT...GCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTTGTGTTTCCACATCTTTAAAGATATATTCCAGTaGCCGAGGGACTCAAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: PCWVPNKAIQPGLCFHIFKDIFQ*PRDSRV Trigger: TACTCTTGAGTCCCTCGGCCACTGGAATATATCTTT...AAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | GAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCCTaGGGCACCTGCCGTGGCCTCAGCCGATTCCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: EQGLIPVAVNIP*GTCRGLSRFQG Trigger: CCCTTGGAATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGGAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCCTGGGGCACCTGCCGAGCTACTGTGGGGATTaGGTGTGTCTGCTGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QGAGPHSSCCEHPLGHLPSYCGD*VCLLPL Trigger: GAGGGGCAGCAGACACACCAAATCCCCACAGTAGCT...CGGCAGGTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 72 bp | CCTCAGCCGATTCCAAGGGCCCAGGCACAGCTACTGTaGGGATTTGGTGTGTCTGCTGCCCCTCCTGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: PQPIPRAQAQLL*GFGVSAAPPGL Trigger: CAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGGGCCCTTGGAATCGGCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 72 bp | AGCGTTTGGATCTCGCCCTCTGAGTTGTGGACCTTCTaGTCTCGCGACTGCCCTCCCCCAGCCTCTTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SVWISPSELWTF*SRDCPPPASSS Trigger: GGAAGAAGAGGCTGGGGGAGGGCAGTCGCGAGAGCAGAAGGTCCACAACTCAGAGGGCGAGATCCAAACGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 72 bp | GGCCCAGGCACAGCTACTGTGGGGATTTGGTGTGTCTaGTGCCCCTCCTGGTCTGAAGAGTCGTCCAGCGTT | + |
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Preference number: 3 (lower is better) Translates to: GPGTATVGIWCV*CPSWSEESSSV Trigger: AACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 72 bp | CCAGGCACAGCTACTGTGGGGATTTGGTGTGTCTGCTaGCCCTCCTGGTCTGAAGAGTCGTCCAGCGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: PGTATVGIWCVC*PSWSEESSSVW Trigger: CCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGCTGTGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR CCA 72 bp | GCTACTGTGGGGATTTGGTGTGTCTGCTGCCCCTCCTaGTCTGAAGAGTCGTCCAGCGTTTGGATCTCGCCC | + |
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Preference number: 3 (lower is better) Translates to: ATVGIWCVCCPS*SEESSSVWISP Trigger: GGGCGAGATCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCCCCACAGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR TCA 72 bp | CCGTGGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTaGACCTCTTTCCTTTGGGCTGGTTTCCACCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PWTPSGVPCSAP*TSFLWAGFHPR Trigger: TCTGGGGTGGAAACCAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | GCAACTGATCTGTTGCCGGTGGCCGTGGACTCCAAGTaGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ATDLLPVAVDSK*CPLLSPLNLFP Trigger: AGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCACGGCCACCGGCAACAGATCAGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | TGCTGCCCCTCCTGGTCTGAAGAGTCGTCCAGCGTTTaGATCTCGCCCTCTGAGTTGTGGACCTTCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: CCPSWSEESSSV*ISPSELWTFCS Trigger: AGAGCAGAAGGTCCACAACTCAGAGGGCGAGATCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
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| 3UTR GCA 72 bp | GCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTaGTTGGAGTTCCTGGGCAACGTTCCCCAACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: ASSHTEPLSTPM*LEFLGNVPQLW Trigger: CCAGAGTTGGGGAACGTTGCCCAGGAACTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | CCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTaGAGTTCCTGGGCAACGTTCCCCAACTCTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: PATQNPSLLLCA*SSWATFPNSGM Trigger: CATGCCAGAGTTGGGGAACGTTGCCCAGGAACTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | CAGAACCCCTCTCTACTCCTATGTGCTTGGAGTTCCTaGGCAACGTTCCCCAACTCTGGCATGGAGGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: QNPSLLLCAWSS*ATFPNSGMEVS Trigger: GCTAACCTCCATGCCAGAGTTGGGGAACGTTGCCCAGGAACTCCAAGCACATAGGAGTAGAGAGGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR TCA 72 bp | GAGACAGATGTGAAAGGGCACCGGGAAAGGAATCCATaGTCGATGCCAGTGGAGCAGGTTCCTCACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: ETDVKGHRERNP*SMPVEQVPHWL Trigger: AAGCCAGTGAGGAACCTGCTCCACTGGCATCGATCATGGATTCCTTTCCCGGTGCCCTTTCACATCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR GCA 72 bp | AGCCGTCATTTTGGAAACTCAAAGCAACTGATCTGTTaGCGGTGGCCGTGGACTCCAAGTGGTGTCCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SRHFGNSKQLIC*RWPWTPSGVPC Trigger: GCAAGGGACACCACTTGGAGTCCACGGCCACCGGCAACAGATCAGTTGCTTTGAGTTTCCAAAATGACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | CATTTTGGAAACTCAAAGCAACTGATCTGTTGCCGGTaGCCGTGGACTCCAAGTGGTGTCCCTTGCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: HFGNSKQLICCR*PWTPSGVPCSA Trigger: GGCTGAGCAAGGGACACCACTTGGAGTCCACGGCCACCGGCAACAGATCAGTTGCTTTGAGTTTCCAAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGCAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAACTGATCCCCTTGCTCAGCCCCTaGAACCTCTTTCCTTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TCRAVIPSRHFGNSKQLIPLLSP*NLFPLG Trigger: GCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGG...GATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR GCA 72 bp | CCTCTTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTaGTATCTTACACGCAAGCACACTTACACTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PLSFGLVSTPEV*YLTRKHTYTCW Trigger: CCAGCAAGTGTAAGTGTGCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | AGTAACCTGCAGAGCTGTGATACCGAGCCGTCATTTTaGAAACTCAAAGCAACTGATCTGTTGCCGGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SNLQSCDTEPSF*KLKATDLLPVA Trigger: GGCCACCGGCAACAGATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR GCA 72 bp | TTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTaGAGAGCTGTGATACCGAGCCGTCATTTTGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: FPNSGMEVSIVT*RAVIPSRHFGN Trigger: GTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR GCA 72 bp | TATTGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTaGCTAATAAAGCCATCCAGCCCGGTTTGTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: YCFTLELGHHAG*LIKPSSPVCVS Trigger: GGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CCA 72 bp | GCACACTTACACTTGCTGGTCTTATCTCACATTGGGTaGCAGGTGAGCATACTGGGGAAATTTAGGGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AHLHLLVLSHIG*QVSILGKFRGK Trigger: TTTTCCCCTAAATTTCCCCAGTATGCTCACCTGCCACCCAATGTGAGATAAGACCAGCAAGTGTAAGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| 3UTR TCA 72 bp | CCTAGATTCAAGGTCTTCATAAATATCCAGTTTAGCTaGGGCCGGGAGGGTGAAAAGATATATTCCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PRFKVFINIQFS*GREGEKIYSSG Trigger: GCCACTGGAATATATCTTTTCACCCTCCCGGCCTCAGCTAAACTGGATATTTATGAAGACCTTGAATCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAACAGATCCATAAGAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCCGCTCCGCCTGGGGTTaGGGGCTGGGAGGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRNRSIRALGGGPQLPAARSAWG*GLGGSH Trigger: GTGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCG...GGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTCTTATGGATCTGTTCCTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR GCA 90 bp | AGATCCATAAGAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCTCCTCACCAATCCCCTGGGGCACCTaGCGTGGCCTCAGCCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSIRALGGGPQLPAASSPIPWGT*RGLSRF Trigger: GAATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGAT...TGGTGAGGAGGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTCTTATGGATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR CCA 90 bp | GGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCTGCCCGCCTCTGCTCCTTaGCTTCCCTCCAGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQVVSLAQPLEPLSFGLPASAP*LPSSSG Trigger: CCCGGAGCTGGAGGGAAGCCAAGGAGCAGAGGCGGG...CAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAACAGATCCATAAGAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCCCTGGGGTTGGGGGCTaGGAGGGTCACACTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRNRSIRALGGGPQLPAAPGVGG*EGHTVA Trigger: AGCCACAGTGTGACCCTCCCAGCCCCCAACCCCAGG...GGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTCTTATGGATCTGTTCCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR GCA 90 bp | GGGACCCAGGGAGCAGGGCCTCATTCCAGTTGCTGTGAACATCCCCTGGGGCACTCCCAGTTCCTCAGCTaGCTGTGTCTGCCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTQGAGPHSSCCEHPLGHSQFLS*LCLPLY Trigger: GTAGAGAGGCAGACACAGGCAGCTGAGGAACTGGGA...GTGCCCCAGGGGATGTTCACAGCAACTGGAATGAGGCCCTGCTCCCTGGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGACTTCTCCTCCAGCTCCGTaGCTCTCCCAGCCTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQWPRDSRVTRVQKSLRTSPPAP*LSQPPL Trigger: GAGGGGAGGCTGGGAGAGGCACGGAGCTGGAGGAGA...AGTCCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCTCCTCACCATCCCAAGCATGGGATTTGGTGTGTCTaGTGCCCCTCCTGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELWEVDPSFPQPPHHPKHGIWCV*CPSWSE Trigger: TTCAGACCAGGAGGGGCAGCAGACACACCAAATCCC...ATGCTTGGGATGGTGAGGAGGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGTGGACCCCAGCTTCCCGCAGCCTCCTCACCATCCCAAGCATAGCGCCCAGGCACAGCTACTGTaGGGATTTGGTGTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WEVDPSFPQPPHHPKHSAQAQLL*GFGVSA Trigger: AGCAGACACACCAAATCCCCACAGTAGCTGTGCCTG...GGCGCTATGCTTGGGATGGTGAGGAGGCTGCGGGAAGCTGGGGTCCACCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTGGAGCCTGGGGTTGGGGGCTaGGAGGGTCACACTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGEASSHTEPLSTPMCLEPGVGG*EGHTVA Trigger: AGCCACAGTGTGACCCTCCCAGCCCCCAACCCCAGG...CTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCGTCATTTTGGAAACTCAAAGCAACTGATCTGTTGCCGGTGGCCGTGGACCGCTCCGCCTGGGGTTaGGGGCTGGGAGGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EPSFWKLKATDLLPVAVDRSAWG*GLGGSH Trigger: GTGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCG...GTCCACGGCCACCGGCAACAGATCAGTTGCTTTGAGTTTCCAAAATGACGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCTCCTCACCATCCCAAGCAGGAGTTTCCTCTAGCTaGAGAGAGGATTGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RALGGGPQLPAASSPSQAGVSSS*REDCSG Trigger: CCCTGAGCAATCCTCTCTTCAGCTAGAGGAAACTCC...TGCTTGGGATGGTGAGGAGGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAACAGATCCATAAGAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCGTCTGCTGCCCCTCCTaGTCTGAAGAGTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRNRSIRALGGGPQLPAAVCCPS*SEESSS Trigger: GCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGAC...GGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTCTTATGGATCTGTTCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR TCA 90 bp | GGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCTGGCTCCCCTCAAAGCCTaGTGTAGCCCAGGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: GLQVVSLAQPLEPLSFGLAPLKA*CSPGRR Trigger: TCGTCTCCCTGGGCTACATCAGGCTTTGAGGGGAGC...CAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR TCA 90 bp | GGATTTGGTGTGTCTGCTGCCCCTCCTGGTCTGAAGAGTCGTCCAGCGTTTGGAGCTCCCCTCAAAGCCTaGTGTAGCCCAGGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: GFGVSAAPPGLKSRPAFGAPLKA*CSPGRR Trigger: TCGTCTCCCTGGGCTACATCAGGCTTTGAGGGGAGC...TCCAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGACACACCAAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131860.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTATTCTGTCCCCGCCTCTaGTCCTTGGCTTCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRAFGLSWEVSLSRALFCPRL*SLASLQ Trigger: CTGGAGGGAAGCCAAGGAGCAGAGGCGGGGACAGAA...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTGGAGGGTTATGGACCCCTCTaGTCTCTCTGCCTGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGEASSHTEPLSTPMCLEGYGPL*SLCLGA Trigger: GGCTCCCAGGCAGAGAGAGCAGAGGGGTCCATAACC...CTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGCTGTTGGGCCTCCTaGCCTCCTTCAGCCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQGCWAS*PPSARI Trigger: GATCCGGGCTGAAGGAGGCCAGGAGGCCCAACAGCC...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTACACTGTGGCTTTGGCTaGCTCAGTCGGGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRRAFGLSWEVSLSRALHCGFG*LSRACS Trigger: GCTGCAAGCCCGACTGAGCCAGCCAAAGCCACAGTG...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR TCA 90 bp | GTCGGGCTTGCAGCTCCTGCATCATGCCAGGATGAGCAAAGCCAAACCTGTAGACTGCCCCTCCTGGTCTaGAGAGTCGTCCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLAAPASCQDEQSQTCRLPLLV*RVVQRL Trigger: CAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAG...TCTACAGGTTTGGCTTTGCTCATCCTGGCATGATGCAGGAGCTGCAAGCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGACTCAGGACCCAGTGTCCTaGCTTTCTGCTTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQWPRDSRVTRVQKSLRTQDPVS*LSAWGL Trigger: AAGGCCCCAAGCAGAAAGGCAGGACACTGGGTCCTG...AGTCCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCTGCAGCTCCGGGTTAAGTaGTACGGAGGTCAGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLQVVSLAQPLEPLSFGLQLRVK*YGGQCL Trigger: GAGGCACTGACCTCCGTAGCACTTAACCCGGAGCTG...CAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTATCCCCTGGGGCACCTaGCGTGGCCTCAGCCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVKRYIPVAEGLKSNQGIPWGT*RGLSRF Trigger: GAATCGGCTGAGGCCACGGCAGGTGCCCCAGGGGAT...ACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTAGGCCCTTGGCTCAGTCGGGCTTaGAGCTCCTGCATCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRAFGLSWEVSLSRALGPWLSRA*SSCIMP Trigger: TGGCATGATGCAGGAGCTGCAAGCCCGACTGAGCCA...AGGGCCTAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGTTGGCTCCTGGCCCCTaGCATCCTCAGCTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQLAPGP*HPQLPS Trigger: GGAAGGCAGCTGAGGATGCCAGGGGCCAGGAGCCAA...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCAAACCTGTAGAAGGAACAGATCCATAAGAGCTCTGGGAGGTGGACCCCTGGGGCACCTGCCGTaGCCTCAGCCGATTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSQTCRRNRSIRALGGGPLGHLP*PQPIPR Trigger: CCTTGGAATCGGCTGAGGCCACGGCAGGTGCCCCAG...GGGTCCACCTCCCAGAGCTCTTATGGATCTGTTCCTTCTACAGGTTTGGCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAACGCTCCGCCTGGGGTTaGGGGCTGGGAGGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VKRYIPVAEGLKSNQGPERSAWG*GLGGSH Trigger: GTGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCG...TTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAACAGATCCATAAGAGCTCTGGGAGGTGGACCCCAGCTTCCCGCAGCCCATTTTTCTTCTGGCTaGCACTGGAGTCCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRNRSIRALGGGPQLPAAHFSSG*HWSPLG Trigger: CCCGAGGGGACTCCAGTGCCAGCCAGAAGAAAAATG...GGCTGCGGGAAGCTGGGGTCCACCTCCCAGAGCTCTTATGGATCTGTTCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR GCA 90 bp | ATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGCTGTCCTCTGTCACATaGTGCCCCTCAGTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFQWPRDSRVTRVQKSLRLSSVT*CPSVPA Trigger: TGCTGGCACTGAGGGGCAGCATGTGACAGAGGACAG...CCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTGGAGCCTGCAAGTTCCATCTaGCTCCCAAGGCACTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGEASSHTEPLSTPMCLEPASSI*LPRHYS Trigger: GCTGTAGTGCCTTGGGAGGCAGATGGAACTTGCAGG...CTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGACTGTGTCCTCACTGTCTTaGAGGCTCAGAGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQWPRDSRVTRVQKSLRTVSSLS*RLRVTS Trigger: GGAGGTGACTCTGAGCCTGCAAGACAGTGAGGACAC...AGTCCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR GCA 90 bp | ATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGTGGCTCAGTCGGGCTTaGAGCTCCTGCATCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFQWPRDSRVTRVQKSLRWLSRA*SSCIMP Trigger: TGGCATGATGCAGGAGCTGCAAGCCCGACTGAGCCA...CCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGAAGCTTCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTTGGAGCCTCTCTACTCAACATaGCCTGGTCCTCAGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGEASSHTEPLSTPMCLEPLYST*PGPQTR Trigger: CCGAGTCTGAGGACCAGGCCATGTTGAGTAGAGAGG...CTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGAAGCTTCCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGAAGACCTCTGGCTGTTaGGCCTCCTGGCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFQWPRDSRVTRVQKSLRKTSGC*ASWPPS Trigger: TGAAGGAGGCCAGGAGGCCCAACAGCCAGAGGTCTT...CCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTAGGCCCTCCCAGCTTCCCATTTTaGCCCTTCCTCGGTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAFGLSWEVSLSRALGPPSFPF*PFLGIH Trigger: GTGGATACCGAGGAAGGGCCAAAATGGGAAGCTGGG...AGGGCCTAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTACCCAAGCTCTGTTTCTaGAGCCAACCCAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRRAFGLSWEVSLSRALPKLCF*SQPSFP Trigger: TGGGAAGCTGGGTTGGCTCCAGAAACAGAGCTTGGG...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGTCTGCTGCCCCTCCTaGTCTGAAGAGTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQVCCPS*SEESSS Trigger: GCTGGACGACTCTTCAGACCAGGAGGGGCAGCAGAC...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | GTCGGGCTTGCAGCTCCTGCATCATGCCAGGATGAGCAAAGCCAAACCTGTAGAGCTACTGTGGGGATTTaGTGTGTCTGCTGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLAAPASCQDEQSQTCRATVGI*CVCCPS Trigger: GGAGGGGCAGCAGACACACCAAATCCCCACAGTAGC...TCTACAGGTTTGGCTTTGCTCATCCTGGCATGATGCAGGAGCTGCAAGCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCGCTGTGAACATCCCCTaGGGCACCTGCCGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFTLELGHHAGCLIKPSSAVNIP*GTCRGL Trigger: GAGGCCACGGCAGGTGCCCCAGGGGATGTTCACAGC...GCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCACCTGGGGTTGGGGGCTaGGAGGGTCACACTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPPGVGG*EGHTVA Trigger: AGCCACAGTGTGACCCTCCCAGCCCCCAACCCCAGG...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR TCA 90 bp | AAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCCCTCGGCCATCCCTaGCTCTGCTGCTCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRYIPVAEGLKSNQGPEEPLGHP*LCCSDH Trigger: GTGGTCAGAGCAGCAGAGTCAGGGATGGCCGAGGGG...CTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGGTGCCAGGTTGGCTGTaGCTCCACCCCCTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRYIPVAEGLKSNQGPEEVPGWL*LHPLGH Trigger: ATGGCCGAGGGGGTGGAGTCACAGCCAACCTGGCAC...CTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTACACGCAAGCACATGCCTCCTCTCCTCCTaGCCCGAAGACCTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLGWFPPQKCAILHASTCLLSS*PEDLWL Trigger: CAGCCAGAGGTCTTCGGGTCAGGAGGAGAGGAGGCA...TGTGCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTAGGAGTTTCCTCTAGCTaGAGAGAGGATTGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRAFGLSWEVSLSRALGVSSS*REDCSG Trigger: CCCTGAGCAATCCTCTCTTCAGCTAGAGGAAACTCC...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR GCA 90 bp | ATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGTCCCAGTTCCTCAGCTaGCTGTGTCTGCCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFQWPRDSRVTRVQKSLRSQFLS*LCLPLY Trigger: GTAGAGAGGCAGACACAGGCAGCTGAGGAACTGGGA...CCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCGTCATTTTGGAAACTCAAAGCAACTGATCTGTTGCCGGTGGCCGTGGACGCTTCCTCTTCACCGTaGTCCCAGATCTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPSFWKLKATDLLPVAVDASSSP*SQISWA Trigger: AGCCCAGGAGATCTGGGAGCACGGTGAAGAGGAAGC...GTCCACGGCCACCGGCAACAGATCAGTTGCTTTGAGTTTCCAAAATGACGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | ATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGTCTACCCCCTCACTCTaGCCACTTCTAAGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFQWPRDSRVTRVQKSLRSTPSL*PLLSPS Trigger: GGAGGGACTTAGAAGTGGCCAGAGTGAGGGGGTAGA...CCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGACTTCCTGCCTTTCTGCTTaGGGCCTTGCAGAGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FQWPRDSRVTRVQKSLRTSCLSA*GLAELS Trigger: AGATAGCTCTGCAAGGCCCCAAGCAGAAAGGCAGGA...AGTCCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGACTTCTGCTCTCTCTGCCTaGGAGCCTAAAGTCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FQWPRDSRVTRVQKSLRTSALSA*EPKVTP Trigger: TGGTGTGACTTTAGGCTCCCAGGCAGAGAGAGCAGA...AGTCCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCTGCAGGCACAGCTACTGTaGGGATTTGGTGTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLQVVSLAQPLEPLSFGLQAQLL*GFGVSA Trigger: AGCAGACACACCAAATCCCCACAGTAGCTGTGCCTG...CAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAACTGATCCTGGGGCACCTGCCGTaGCCTCAGCCGATTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCRAVIPSRHFGNSKQLILGHLP*PQPIPR Trigger: CCTTGGAATCGGCTGAGGCCACGGCAGGTGCCCCAG...GATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GATGAGCAAAGCCAAACCTGTAGAAGGAACAGATCCATAAGAGCTCTGGGAGGTGCTGTGAACATCCCCTaGGGCACCTGCCGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DEQSQTCRRNRSIRALGGAVNIP*GTCRGL Trigger: GAGGCCACGGCAGGTGCCCCAGGGGATGTTCACAGC...ACCTCCCAGAGCTCTTATGGATCTGTTCCTTCTACAGGTTTGGCTTTGCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
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| 3UTR CAA 72 bp | TCCAGCCACACAGAACCCCTCTCTACTCCTATGTGCTaGGAGTTCCTGGGCAACGTTCCCCAACTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHTEPLSTPMC*EFLGNVPQLWH Trigger: ATGCCAGAGTTGGGGAACGTTGCCCAGGAACTCCAAGCACATAGGAGTAGAGAGGGGTTCTGTGTGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | TTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTACACGCAAGCACACCTGGCATCCTCAGCTaGCTTCCAGGACCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGWFPPQKCAILHASTPGILS*LPGPSV Trigger: GACACTGGGTCCTGGAAGGCAGCTGAGGATGCCAGG...TGTGCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | GAGGCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCCTGCAAGTTCCATCTaGCTCCCAAGGCACTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGRVKRYIPVAEGLKSNPASSI*LPRHYS Trigger: GCTGTAGTGCCTTGGGAGGCAGATGGAACTTGCAGG...GTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS-3UTR GCA 90 bp | ACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTGCAGAGCTGTGATATTCTGCTCTCGCGACTaGCCTCCCCCAGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSGMEVSIVTCRAVIFCSRD*PPPASS Trigger: AGAAGAGGCTGGGGGAGGGCAGTCGCGAGAGCAGAA...TATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCACTTCAGTGGGACACTTaGCTCCTGGCCCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPLQWDT*LLAPGI Trigger: GATGCCAGGGGCCAGGAGCCAAGTGTCCCACTGAAG...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTAGGCCCTTTCACCATCCCTCATTaGGACCATCCTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRAFGLSWEVSLSRALGPFTIPH*DHPLLF Trigger: GAAGAGGAGAGGATGGTCCCAATGAGGGATGGTGAA...AGGGCCTAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTATACTCTCAATACCTCTaGTGTCATCTGGGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRRAFGLSWEVSLSRALYSQYL*CHLGGF Trigger: GAAGCCGCCCAGATGACACCAGAGGTATTGAGAGTA...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAGCTCCTGCATCATGCCAGGATGAGCAAAGCCAAACCTGTAGAAGGCCAGCATTTTTCTTCTaGCTGGCACTGGAGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLAAPASCQDEQSQTCRRPAFFF*LALESP Trigger: AGGGGACTCCAGTGCCAGCCAGAAGAAAAATGCTGG...CCTTCTACAGGTTTGGCTTTGCTCATCCTGGCATGATGCAGGAGCTGCAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
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| 3UTR CAA 72 bp | GAGCCGTCATTTTGGAAACTCAAAGCAACTGATCTGTaGCCGGTGGCCGTGGACTCCAAGTGGTGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPSFWKLKATDL*PVAVDSKWCPL Trigger: CAAGGGACACCACTTGGAGTCCACGGCCACCGGCAACAGATCAGTTGCTTTGAGTTTCCAAAATGACGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR TCA 90 bp | CCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTTGTGTTTCCACATCTTTCTTGGATTCCTCCACTaGCTCTTCTGTCCCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCWVPNKAIQPGLCFHIFLGFLH*LFCPRL Trigger: GAGGCGGGGACAGAAGAGTCAGTGGAGGAATCCAAG...AAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR TCA 90 bp | GTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAACTGCCCCTCCTGGTCTaGAGAGTCGTCCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKRYIPVAEGLKSNQGPELPLLV*RVVQRL Trigger: CAAACGCTGGACGACTCTTCAGACCAGGAGGGGCAG...TTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | ACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTGCAGAGCTGTGATACCTCCTGGCTATTTCTaGGGTCCACACCCCTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSGMEVSIVTCRAVIPPGYF*GPHPYS Trigger: GGAGTAGGGGTGTGGACCGCAGAAATAGCCAGGAGG...TATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | ACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTGCAGAGCTGTGATACACTGCCTGCTCGGTTaGAGTCTGTTCCTTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSGMEVSIVTCRAVIHCLLG*SLFLAC Trigger: GCAGGCAAGGAACAGACTGCAACCGAGCAGGCAGTG...TATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCACCCTCCAGTACCTCCTaGGCTTCCTCTCCTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPPSSTS*ASSPTT Trigger: GGTTGTAGGAGAGGAAGCCCAGGAGGTACTGGAGGG...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GTGGACTCCAAGTGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTTGGGCAGTTCCTTTTCTCCCTaGAGGATTCTTCTGCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VDSKWCPLLSPLNLFPLGSSFSP*RILLPV Trigger: TACGGGCAGAAGAATCCTCCAGGGAGAAAAGGAACT...GCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCACTTGGAGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGCAGCCTCGTTTTCTGTaGGCTTGGATTCCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQQPRFL*AWIPPL Trigger: CAGTGGAGGAATCCAAGCCCACAGAAAACGAGGCTG...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTACACGCAAGCACAGCTACTGTGGGGATTTaGTGTGTCTGCTGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGWFPPQKCAILHASTATVGI*CVCCPS Trigger: GGAGGGGCAGCAGACACACCAAATCCCCACAGTAGC...TGTGCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGCCAGCATTTTTCTTCTaGCTGGCACTGGAGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQPAFFF*LALESP Trigger: AGGGGACTCCAGTGCCAGCCAGAAGAAAAATGCTGG...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAACTGATCCACTGTGGCTTTGGCTaGCTCAGTCGGGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCRAVIPSRHFGNSKQLIHCGFG*LSRACS Trigger: GCTGCAAGCCCGACTGAGCCAGCCAAAGCCACAGTG...GATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CAA 72 bp | TGGTGTCCCTTGCTCAGCCCCTTGAACCTCTTTCCTTaGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WCPLLSPLNLFP*GWFPPQKCAIL Trigger: TAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAAGAGGTTCAAGGGGCTGAGCAAGGGACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCTCCTCTGTCACATGCTaGCCCTCAGTGCCAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CFTLELGHHAGCLIKPSSSSVTC*PSVPAF Trigger: GAATGCTGGCACTGAGGGGCAGCATGTGACAGAGGA...GCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | ATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCTTCGGCTGATGGCTAAGTCTTaGCTCTCCTCATCCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFQWPRDSRVTRVQKSLRLMAKS*LSSSSK Trigger: CTTTGAGGATGAGGAGAGGCAAGACTTAGCCATCAG...CCGAAGGCTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCGTGTCCTCACTGTCTTaGAGGCTCAGAGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFTLELGHHAGCLIKPSSVSSLS*RLRVTS Trigger: GGAGGTGACTCTGAGCCTGCAAGACAGTGAGGACAC...GCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCGGGATTTGGTGTGTCTaGTGCCCCTCCTGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFTLELGHHAGCLIKPSSGIWCV*CPSWSE Trigger: TTCAGACCAGGAGGGGCAGCAGACACACCAAATCCC...GCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | CCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTTGTGTTTCCACATCTTTCTCTGGGCTCAGGTCTaGAGCTCCACTAGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCWVPNKAIQPGLCFHIFLWAQV*SSTSLF Trigger: GAAGAGACTAGTGGAGCTCCAGACCTGAGCCCAGAG...AAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | ACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTGCAGAGCTGTGATACATTTTTCTTCTGGCTaGCACTGGAGTCCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSGMEVSIVTCRAVIHFSSG*HWSPLG Trigger: CCCGAGGGGACTCCAGTGCCAGCCAGAAGAAAAATG...TATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR TCA 90 bp | TTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTACACGCAAGCACACCACTAGTCTCTTCCTaGCCCTTCTGTCCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLGWFPPQKCAILHASTPLVSS*PFCPSS Trigger: TGAGGAAGGACAGAAGGGTCAGGAAGAGACTAGTGG...TGTGCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTAAAACCATTCGATTTCTaGAACCATGTCTTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRRAFGLSWEVSLSRALKPFDF*NHVFGH Trigger: GTGGCCAAAGACATGGTTGCAGAAATCGAATGGTTT...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | AAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGTGTCCCCTGTGCCCTTaGCCTTTCACCATCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRYIPVAEGLKSNQGPEECPLCP*PFTIPH Trigger: ATGAGGGATGGTGAAAGGGCAAGGGCACAGGGGACA...CTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | AAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCATTTTTCTTCTGGCTaGCACTGGAGTCCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRYIPVAEGLKSNQGPEEHFSSG*HWSPLG Trigger: CCCGAGGGGACTCCAGTGCCAGCCAGAAGAAAAATG...CTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS-3UTR TCA 90 bp | GGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTGGTCCTGTCCTTCAGTaGCCTTTACTCTCAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVKRYIPVAEGLKSNQGGPVLQ*PLLSIP Trigger: AGGTATTGAGAGTAAAGGTCACTGAAGGACAGGACC...ACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR TCA 90 bp | ACCTGCAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAACTGATCGGAGTTTCCTCTAGCTaGAGAGAGGATTGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCRAVIPSRHFGNSKQLIGVSSS*REDCSG Trigger: CCCTGAGCAATCCTCTCTTCAGCTAGAGGAAACTCC...GATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | GTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAAGATGTCTCCATCTCTaGCTGCTCCCCCTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKRYIPVAEGLKSNQGPERCLHL*LLPLFS Trigger: ACTGAAGAGGGGGAGCAGGCAGAGATGGAGACATCT...TTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| 3UTR CAA 72 bp | CCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTaGTGTTTCCACATCTTTTCACAGGAAGGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PCWVPNKAIQPG*CFHIFSQEGLT Trigger: TGTCAGACCTTCCTGTGAAAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR TCA 90 bp | GTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAATCTTCCAACAGCATCTaGTCTCTTAGGAGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKRYIPVAEGLKSNQGPESSNSI*SLRSPS Trigger: TGAGGGGCTCCTAAGAGATCAGATGCTGTTGGAAGA...TTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGCCTGCTTCAGCATCTaGTTTTACCTCCTGGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPACFSI*FYLLAI Trigger: AATAGCCAGGAGGTAAAAGCAGATGCTGAAGCAGGC...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | CCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTTGTGTTTCCACATCTTTCGTTTTCTGTGGGCTTaGATTCCTCCACTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCWVPNKAIQPGLCFHIFRFLWA*IPPLTL Trigger: AAGAGTCAGTGGAGGAATCCAAGCCCACAGAAAACG...AAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | ACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTGCAGAGCTGTGATACCTCAGCCAAATAACTaGTCTCTGTGTCCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFPNSGMEVSIVTCRAVIPQPNN*SLCPHC Trigger: ACAGTGAGGACACAGAGACCAGTTATTTGGCTGAGG...TATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCACCTCAGCCAAATAACTaGTCTCTGTGTCCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPPQPNN*SLCPHC Trigger: ACAGTGAGGACACAGAGACCAGTTATTTGGCTGAGG...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
||
| CDS-3UTR GCA 90 bp | CCTCACTGGCTTAATCAGACTCCTAGATTCAAGGTCTTCATAAATATCCAGTTTGTGAGTCCCAGGCTCTaGCTCAGGCTTCAGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHWLNQTPRFKVFINIQFVSPRL*LRLQWD Trigger: GTCCCACTGAAGCCTGAGGCAGAGCCTGGGACTCAC...AAACTGGATATTTATGAAGACCTTGAATCTAGGAGTCTGATTAAGCCAGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | CCATGCTGGGTGCCTAATAAAGCCATCCAGCCCGGTTTGTGTTTCCACATCTTTAGTCTGTTCCTTGCCTaGTTCAGCATCTGCTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: PCWVPNKAIQPGLCFHIFSLFLA*FSICFY Trigger: GTAAAAGCAGATGCTGAAGCAGGCAAGGAACAGACT...AAAGATGTGGAAACACAAACCGGGCTGGATGGCTTTATTAGGCACCCAGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | GTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAATTGCAGTCTGTTCCTTaGCTGCTTCAGCATCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: VKRYIPVAEGLKSNQGPELQSVP*LLQHLL Trigger: AAGCAGATGCTGAAGCAGGCAAGGAACAGACTGCAA...TTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR GCA 90 bp | AAATGGTTTATTTATTGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAGCATTGTGTCCCCTGTaGCCTTGCCCTTTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: KWFIYCFTLELGHHAGCLALCPL*PCPFTI Trigger: GATGGTGAAAGGGCAAGGGCACAGGGGACACAATGC...TAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACAATAAATAAACCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAACTGATCCCTTGTCAATCCCTTTaGCACCAAACCATTCGATTT | + |
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Preference number: 4 (lower is better) Translates to: TCRAVIPSRHFGNSKQLIPCQSL*HQTIRF Trigger: AAATCGAATGGTTTGGTGCCAAAGGGATTGACAAGG...GATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CCA 90 bp | AAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGTGTTTAGTTAAAGCCTaGGAATGTCTCACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRYIPVAEGLKSNQGPEECLVKA*ECLTSS Trigger: TGAGCTGGTGAGACATTCCCAGGCTTTAACTAAACA...CTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR TCA 90 bp | AAATGGTTTATTTATTGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTATCACTCCATTATCCCTaGTGGCTAAGTCTTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KWFIYCFTLELGHHAGCLSLHYP*WLSLAS Trigger: AGAGGCAAGACTTAGCCATCAGGGATAATGGAGTGA...TAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACAATAAATAAACCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | AGGTGGACCCCAGCTTCCCGCAGCCTCCTCACCATCCCAAGCATAGCGCCCCTGCCGCTCCGCCTGGGGTaGGGGGCTGGGAGGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: RWTPASRSLLTIPSIAPLPLRLG*GAGRVT Trigger: TGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCGG...CAGGGGCGCTATGCTTGGGATGGTGAGGAGGCTGCGGGAAGCTGGGGTCCACCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
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| CDS CCA 90 bp | TGGGGGCTGGGAGGGTCACACTGTGGCTCAGGAACAGAGATTCGATaGAAAGAGGGCCTCGAGCGCCGCCGTGAGGAGCTTCGAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGLGGSHCGSGTEIR*KEGLERRREELRER Trigger: CCTCTCTCGAAGCTCCTCACGGCGGCGCTCGAGGCCCTCTTTCCATCGAATCTCTGTTCCTGAGCCACAGTGTGACCCTCCCAGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS CCA 90 bp | GAGAGGATTGCTCAGGGACCGGCCGCTCCGCCTGGGGTTGGGGGCTaGGAGGGTCACACTGTGGCTCAGGAACAGAGATTCGATGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: ERIAQGPAAPPGVGG*EGHTVAQEQRFDGK Trigger: CTTTCCATCGAATCTCTGTTCCTGAGCCACAGTGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCGGCCGGTCCCTGAGCAATCCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS-3UTR CAA 90 bp | GTGGACCCCAGCTTCCCGCAGCCTCCTCACCATCCCAAGCATAGCGCCCCTGTGAGCTACTGTGGGGATTaGGTGTGTCTGCTGCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VDPSFPQPPHHPKHSAPVSYCGD*VCLLPL Trigger: GAGGGGCAGCAGACACACCAAATCCCCACAGTAGCT...CACAGGGGCGCTATGCTTGGGATGGTGAGGAGGCTGCGGGAAGCTGGGGTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000144173.2 |
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| CDS GCA 90 bp | CTCTGGCTGTTGGGCCTCCTGGCCTCCTTCAGCCCGGATCTCCACTaGCTGCTCGGTTGCAGTCTGTTCCTTGCCTGCTTCAGCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: LWLLGLLASFSPDLH*LLGCSLFLACFSIC Trigger: GCAGATGCTGAAGCAGGCAAGGAACAGACTGCAACCGAGCAGGCAGTGGAGATCCGGGCTGAAGGAGGCCAGGAGGCCCAACAGCCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGCCGCTCCGCCTGGGGTaGGGGGCTGGGAGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQPLRLG*GAGRVT Trigger: TGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCGG...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS TCA 90 bp | CTCAGGAACAGAGATTCGATGGAAAGAGGGCCTCGAGCGCCGCCGTaGGGAGCTTCGAGAGAGGAGCACACGACTCCGAGGGACAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LRNRDSMERGPRAPP*GASREEHTTPRDRD Trigger: GTCTCTGTCCCTCGGAGTCGTGTGCTCCTCTCTCGAAGCTCCTCACGGCGGCGCTCGAGGCCCTCTTTCCATCGAATCTCTGTTCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS CCA 90 bp | GGCTTGGATTCCTCCACTGACTCTTCTGTCCCCGCCTCTGCTCCTTaGCTTCCCTCCAGCTCCGGGTTAAGTGCTACGGAGGTCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLDSSTDSSVPASAP*LPSSSGLSATEVSA Trigger: GGCACTGACCTCCGTAGCACTTAACCCGGAGCTGGAGGGAAGCCAAGGAGCAGAGGCGGGGACAGAAGAGTCAGTGGAGGAATCCAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGAAGAGCCTTCGGACTCTCTTGGGAGGTCTCTCTCTCTAGGGCTCTACTGGCTCAGTCGGGCTaGCAGCTCCTGCATCATGCC | + |
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Preference number: 5 (lower is better) Translates to: GSRRAFGLSWEVSLSRALLAQSG*QLLHHA Trigger: GGCATGATGCAGGAGCTGCAAGCCCGACTGAGCCAG...TAGAGCCCTAGAGAGAGAGACCTCCCAAGAGAGTCCGAAGGCTCTTCTGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS GCA 90 bp | GACACCTTCTCTGCTGAGCCCACCAAGCCAACTTCCTGTCCACTTTaGTTCTCTGTAGTCTCCTCCAGCTCCGTGCCTCTCCCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DTFSAEPTKPTSCPL*FSVVSSSSVPLPAS Trigger: GGAGGCTGGGAGAGGCACGGAGCTGGAGGAGACTACAGAGAAGCAAAGTGGACAGGAAGTTGGCTTGGTGGGCTCAGCAGAGAAGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | AAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAGAGCCGCTCCGCCTGGGGTaGGGGGCTGGGAGGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: KRYIPVAEGLKSNQGPEEPLRLG*GAGRVT Trigger: TGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCGG...CTCTTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS CCA 90 bp | TCTACCCCCTCACTCTGGCCACTTCTAAGTCCCTCCAGTACCTCCTaGGCTTCCTCTCCTACAACCTTCCCCTCAGTCACCTCTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: STPSLWPLLSPSSTS*ASSPTTFPSVTSPS Trigger: ACTGGGAGAGGTGACTGAGGGGAAGGTTGTAGGAGAGGAAGCCCAGGAGGTACTGGAGGGACTTAGAAGTGGCCAGAGTGAGGGGGTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 90 bp | TTGCTTCCTCTTCACCGTGCTCCCAGATCTCCTGGGCTGTATTACTaGTCCTGTCTCTGTGAGTCCCAGGCTCTGCCTCAGGCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPLHRAPRSPGLYY*SCLCESQALPQASV Trigger: CACTGAAGCCTGAGGCAGAGCCTGGGACTCACAGAGACAGGAGCAGTAATACAGCCCAGGAGATCTGGGAGCACGGTGAAGAGGAAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTGCTTCAGTGGGACACTaGGCTCCTGGCCCCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRVKRYIPVAEGLKSNQGASVGH*APGPWH Trigger: ATGCCAGGGGCCAGGAGCCAAGTGTCCCACTGAAGC...ACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCTGGCTCAGTCGGGCTaGCAGCTCCTGCATCATGCC | + |
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Preference number: 5 (lower is better) Translates to: GRVKRYIPVAEGLKSNQGLAQSG*QLLHHA Trigger: GGCATGATGCAGGAGCTGCAAGCCCGACTGAGCCAG...ACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS GCA 90 bp | CTTCAGCCCGGATCTCCACTGCCTGCTCGGTTGCAGTCTGTTCCTTaGCTGCTTCAGCATCTGCTTTTACCTCCTGGCTATTTCTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: LQPGSPLPARLQSVP*LLQHLLLPPGYFCG Trigger: ACCGCAGAAATAGCCAGGAGGTAAAAGCAGATGCTGAAGCAGGCAAGGAACAGACTGCAACCGAGCAGGCAGTGGAGATCCGGGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | GCCGGGAGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGTCCTGCTGGTCTCCCTaGTCAGCCTCTTCTAGGACC | + |
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Preference number: 5 (lower is better) Translates to: AGRVKRYIPVAEGLKSNQSCWSP*SASSRT Trigger: GGTCCTAGAAGAGGCTGACAAGGGAGACCAGCAGGA...CTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCTCCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | ACGTTCCCCAACTCTGGCATGGAGGTTAGCATAGTAACCTGCAGAGCTGTGATAGAAGACCTCTGGCTGTaGGGCCTCCTGGCCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TFPNSGMEVSIVTCRAVIEDLWL*GLLASF Trigger: GAAGGAGGCCAGGAGGCCCAACAGCCAGAGGTCTTC...TATCACAGCTCTGCAGGTTACTATGCTAACCTCCATGCCAGAGTTGGGGAACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 90 bp | TCTGCTCTCCACCCCCAGGTCTGTTCACCAGCTAAACTTCCTTCTTaGCATCTTCTAGTCTCTTCGGGTGCTTCTACCCCCTCACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SALHPQVCSPAKLPS*HLLVSSGASTPSLW Trigger: CCAGAGTGAGGGGGTAGAAGCACCCGAAGAGACTAGAAGATGCCAAGAAGGAAGTTTAGCTGGTGAACAGACCTGGGGGTGGAGAGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 90 bp | GGAAACCTAACTTCAGCCTCTCTCTTCTCGTCGACCTCATCCTGCTaGTCTCCCTTGTCAGCCTCTTCTAGGACCCAGACTCTCCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GNLTSASLFSSTSSC*SPLSASSRTQTLPV Trigger: TACTGGGAGAGTCTGGGTCCTAGAAGAGGCTGACAAGGGAGACCAGCAGGATGAGGTCGACGAGAAGAGAGAGGCTGAAGTTAGGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCGAGGCTCCCCACTGCTaGCTTCCTCTTCACCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: CFTLELGHHAGCLIKPSSEAPHC*LPLHRA Trigger: AGCACGGTGAAGAGGAAGCAAGCAGTGGGGAGCCTC...GCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 90 bp | AGCACCCGCTCTGGGCTCAGGTCTGGAGCTCCACTAGTCTCTTCCTaGCCCTTCTGTCCTTCCTCAAGTTGTTTAGTTAAAGCCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: STRSGLRSGAPLVSS*PFCPSSSCLVKAWE Trigger: TTCCCAGGCTTTAACTAAACAACTTGAGGAAGGACAGAAGGGTCAGGAAGAGACTAGTGGAGCTCCAGACCTGAGCCCAGAGCGGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 90 bp | CTCTTCTTCCTTCTGTTCACAGGTTCTCAGAGGCTCCCCACTGCTTaGTTCCTCTTCACCGTGCTCCCAGATCTCCTGGGCTGTATTACT | + |
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Preference number: 5 (lower is better) Translates to: LFFLLFTGSQRLPTA*FLFTVLPDLLGCIT Trigger: AGTAATACAGCCCAGGAGATCTGGGAGCACGGTGAAGAGGAAGCAAGCAGTGGGGAGCCTCTGAGAACCTGTGAACAGAAGGAAGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 90 bp | ATTCGATTTCTGCAACCATGTCTTTGGCCACCCAGTCTATCTCTTTaGTGTCCTCTGTCACATGCTGCCCCTCAGTGCCAGCATTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: IRFLQPCLWPPSLSL*CPLSHAAPQCQHSP Trigger: GGGGGAATGCTGGCACTGAGGGGCAGCATGTGACAGAGGACAGCAAAGAGATAGACTGGGTGGCCAAAGACATGGTTGCAGAAATCGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 90 bp | CCAGCATTTTTCTTCTGGCTGGCACTGGAGTCCCCTCGGGCTTTGTaGCACTTAGCTCTGGAGTTTCCTCTAGCTGAAGAGAGGATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAFFFWLALESPRAL*HLALEFPLAEERIA Trigger: AGCAATCCTCTCTTCAGCTAGAGGAAACTCCAGAGCTAAGTGCCACAAAGCCCGAGGGGACTCCAGTGCCAGCCAGAAGAAAAATGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS-3UTR CAA 90 bp | TTTCCTTTGGGCTGGTTTCCACCCCAGAAGTGTGCTATCTTACACGCAAGCACAGTCCTGCCTTTCTGCTaGGGGCCTTGCAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: FPLGWFPPQKCAILHASTVLPFC*GPCRAI Trigger: GATAGCTCTGCAAGGCCCCAAGCAGAAAGGCAGGAC...TGTGCTTGCGTGTAAGATAGCACACTTCTGGGGTGGAAACCAGCCCAAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGTAGTTCCTGGGAAGTaGTCTCCTGGGTCTGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPVVPGK*SPGSDP Trigger: CGGGTCAGACCCAGGAGACAACTTCCCAGGAACTAC...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | AGGGTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAAGCTACTGTGGGGATTaGGTGTGTCTGCTGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVKRYIPVAEGLKSNQGPSYCGD*VCLLPL Trigger: GAGGGGCAGCAGACACACCAAATCCCCACAGTAGCT...TGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 90 bp | TCCTGTCCTTCAGTGACCTTTACTCTCAATACCTCTGGTGTCATCTaGGCGGCTTCACTCCTCTCTCCCACAAACAACTCCTCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCPSVTFTLNTSGVI*AASLLSPTNNSSVL Trigger: CAGCACTGAGGAGTTGTTTGTGGGAGAGAGGAGTGAAGCCGCCCAGATGACACCAGAGGTATTGAGAGTAAAGGTCACTGAAGGACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 90 bp | CATCCCTCATTGGGACCATCCTCTCCTCTTCCTTGTCAATCCCTTTaGCACCAAACCATTCGATTTCTGCAACCATGTCTTTGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HPSLGPSSPLPCQSL*HQTIRFLQPCLWPP Trigger: GGGTGGCCAAAGACATGGTTGCAGAAATCGAATGGTTTGGTGCCAAAGGGATTGACAAGGAAGAGGAGAGGATGGTCCCAATGAGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | GTGAAAAGATATATTCCAGTGGCCGAGGGACTCAAGAGTAACCAGGGTCCAGAAACCCAGCTTCCCATTTaGGCCCTTCCTCGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKRYIPVAEGLKSNQGPETQLPI*ALPRYP Trigger: TGGATACCGAGGAAGGGCCAAAATGGGAAGCTGGGT...TTCTGGACCCTGGTTACTCTTGAGTCCCTCGGCCACTGGAATATATCTTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 90 bp | ATTCTTCTGCCCGTACCTCTTCTTCTAGACTCACTCCATTATCCCTaGTGGCTAAGTCTTGCCTCTCCTCATCCTCAAAGCTGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILLPVPLLLDSLHYP*WLSLASPHPQSCPL Trigger: CAGAGGGCAGCTTTGAGGATGAGGAGAGGCAAGACTTAGCCATCAGGGATAATGGAGTGAGTCTAGAAGAAGAGGTACGGGCAGAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 90 bp | ACCTCTTCTTCTAGACTCACTCCATTATCCCTGATGGCTAAGTCTTaGCTCTCCTCATCCTCAAAGCTGCCCTCTGTTTCCTGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSSRLTPLSLMAKS*LSSSSKLPSVSCSP Trigger: GGGAGAACAGGAAACAGAGGGCAGCTTTGAGGATGAGGAGAGGCAAGACTTAGCCATCAGGGATAATGGAGTGAGTCTAGAAGAAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 90 bp | CAATCCCTTTGGCACCAAACCATTCGATTTCTGCAACCATGTCTTTaGCCACCCAGTCTATCTCTTTGCTGTCCTCTGTCACATGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSLWHQTIRFLQPCL*PPSLSLCCPLSHAA Trigger: GGCAGCATGTGACAGAGGACAGCAAAGAGATAGACTGGGTGGCCAAAGACATGGTTGCAGAAATCGAATGGTTTGGTGCCAAAGGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCAGAGCTGTGATACCGAGCCGTCATTTTGGAAACTCAAAGCAACTGATCACCCAGTCTATCTCTTaGCTGTCCTCTGTCACATGC | + |
|
Preference number: 5 (lower is better) Translates to: TCRAVIPSRHFGNSKQLITQSIS*LSSVTC Trigger: GCATGTGACAGAGGACAGCAAAGAGATAGACTGGGT...GATCAGTTGCTTTGAGTTTCCAAAATGACGGCTCGGTATCACAGCTCTGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 90 bp | AGTCCCATCAATTTCTTGGATATCATAGCCAGACACCTTCTCTGCTaGGCCCACCAAGCCAACTTCCTGTCCACTTTGCTTCTCTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPINFLDIIARHLLC*AHQANFLSTLLLCS Trigger: ACTACAGAGAAGCAAAGTGGACAGGAAGTTGGCTTGGTGGGCTCAGCAGAGAAGGTGTCTGGCTATGATATCCAAGAAATTGATGGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS-3UTR CAA 90 bp | AAATGGTTTATTTATTGTTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTATTTCACCATCCCTCATaGGGACCATCCTCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KWFIYCFTLELGHHAGCLFHHPS*GPSSPL Trigger: AAGAGGAGAGGATGGTCCCAATGAGGGATGGTGAAA...TAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAACAATAAATAAACCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | GAGGATTGCTCAGGGACCGGCCGCTCCGCCTGGGGTTaGGGGCTGGGAGGGTCACACTGTGGCTCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: EDCSGTGRSAWG*GLGGSHCGSGT Trigger: TGTTCCTGAGCCACAGTGTGACCCTCCCAGCCCCCAACCCCAGGCGGAGCGGCCGGTCCCTGAGCAATCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS CCA 72 bp | CCTCCTGACCCGAAGACCTCTGGCTGTTGGGCCTCCTaGCCTCCTTCAGCCCGGATCTCCACTGCCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PPDPKTSGCWAS*PPSARISTACS Trigger: CGAGCAGGCAGTGGAGATCCGGGCTGAAGGAGGCCAGGAGGCCCAACAGCCAGAGGTCTTCGGGTCAGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 72 bp | GAGTCCCAGGCTCTGCCTCAGGCTTCAGTGGGACACTaGGCTCCTGGCCCCTGGCATCCTCAGCTGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESQALPQASVGH*APGPWHPQLPS Trigger: GGAAGGCAGCTGAGGATGCCAGGGGCCAGGAGCCAAGTGTCCCACTGAAGCCTGAGGCAGAGCCTGGGACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | AGTCCCAGGCTCTGCCTCAGGCTTCAGTGGGACACTTaGCTCCTGGCCCCTGGCATCCTCAGCTGCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SPRLCLRLQWDT*LLAPGILSCLP Trigger: TGGAAGGCAGCTGAGGATGCCAGGGGCCAGGAGCCAAGTGTCCCACTGAAGCCTGAGGCAGAGCCTGGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | GTTAAGTGCTACGGAGGTCAGTGCCTCCTCTCCTCCTaGCCCGAAGACCTCTGGCTGTTGGGCCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKCYGGQCLLSS*PEDLWLLGLLA Trigger: GGCCAGGAGGCCCAACAGCCAGAGGTCTTCGGGTCAGGAGGAGAGGAGGCACTGACCTCCGTAGCACTTAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | CCCTGTCTGAGACTGTCCAGGCCTCTCTACTCAACATaGCCTGGTCCTCAGACTCGGCCCCGGGGCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: PCLRLSRPLYST*PGPQTRPRGIV Trigger: CACAATGCCCCGGGGCCGAGTCTGAGGACCAGGCCATGTTGAGTAGAGAGGCCTGGACAGTCTCAGACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | CTCCGCCTGGGGTTGGGGGCTGGGAGGGTCACACTGTaGCTCAGGAACAGAGATTCGATGGAAAGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LRLGLGAGRVTL*LRNRDSMERGP Trigger: AGGCCCTCTTTCCATCGAATCTCTGTTCCTGAGCCACAGTGTGACCCTCCCAGCCCCCAACCCCAGGCGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS CCA 72 bp | GGAGGGTCACACTGTGGCTCAGGAACAGAGATTCGATaGAAAGAGGGCCTCGAGCGCCGCCGTGAGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGSHCGSGTEIR*KEGLERRREEL Trigger: AAGCTCCTCACGGCGGCGCTCGAGGCCCTCTTTCCATCGAATCTCTGTTCCTGAGCCACAGTGTGACCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS GCA 72 bp | TGTATTACTGCTCCTGTCTCTGTGAGTCCCAGGCTCTaGCTCAGGCTTCAGTGGGACACTTGGCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: CITAPVSVSPRL*LRLQWDTWLLA Trigger: GGCCAGGAGCCAAGTGTCCCACTGAAGCCTGAGGCAGAGCCTGGGACTCACAGAGACAGGAGCAGTAATACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | CTTCACCGTGCTCCCAGATCTCCTGGGCTGTATTACTaGTCCTGTCTCTGTGAGTCCCAGGCTCTGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LHRAPRSPGLYY*SCLCESQALPQ Trigger: CTGAGGCAGAGCCTGGGACTCACAGAGACAGGAGCAGTAATACAGCCCAGGAGATCTGGGAGCACGGTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | CTTCTGTTCACAGGTTCTCAGAGGCTCCCCACTGCTTaGTTCCTCTTCACCGTGCTCCCAGATCTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLFTGSQRLPTA*FLFTVLPDLLG Trigger: GCCCAGGAGATCTGGGAGCACGGTGAAGAGGAAGCAAGCAGTGGGGAGCCTCTGAGAACCTGTGAACAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | GCCTCCTTCAGCCCGGATCTCCACTGCCTGCTCGGTTaGAGTCTGTTCCTTGCCTGCTTCAGCATCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ASFSPDLHCLLG*SLFLACFSICF Trigger: AAAGCAGATGCTGAAGCAGGCAAGGAACAGACTGCAACCGAGCAGGCAGTGGAGATCCGGGCTGAAGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 72 bp | CCTTCTGTTCACAGGTTCTCAGAGGCTCCCCACTGCTaGCTTCCTCTTCACCGTGCTCCCAGATCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PSVHRFSEAPHC*LPLHRAPRSPG Trigger: CCCAGGAGATCTGGGAGCACGGTGAAGAGGAAGCAAGCAGTGGGGAGCCTCTGAGAACCTGTGAACAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 90 bp | ACTTCAGCCTCTCTCTTCTCGTCGACCTCATCCTGCTGGTCTCCCTaGTCAGCCTCTTCTAGGACCCAGACTCTCCCAGTAGTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TSASLFSSTSSCWSP*SASSRTQTLPVVPG Trigger: CCCAGGAACTACTGGGAGAGTCTGGGTCCTAGAAGAGGCTGACAAGGGAGACCAGCAGGATGAGGTCGACGAGAAGAGAGAGGCTGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | AACGCACTGAAGGAGTCCAGTGCTCCCCTCAAAGCCTaGTGTAGCCCAGGGAGACGAAGCCGGAGAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: NALKESSAPLKA*CSPGRRSRRKS Trigger: GGATTTTCTCCGGCTTCGTCTCCCTGGGCTACATCAGGCTTTGAGGGGAGCACTGGACTCCTTCAGTGCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000131860.2 |
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| CDS GCA 72 bp | TCTGCTGAGCCCACCAAGCCAACTTCCTGTCCACTTTaGTTCTCTGTAGTCTCCTCCAGCTCCGTGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAEPTKPTSCPL*FSVVSSSSVPL Trigger: GAGAGGCACGGAGCTGGAGGAGACTACAGAGAAGCAAAGTGGACAGGAAGTTGGCTTGGTGGGCTCAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | AAGCTCTGTTTCTGGAGCCAACCCAGCTTCCCATTTTaGCCCTTCCTCGGTATCCACGGCCCTGATACCCAC | + |
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Preference number: 6 (lower is better) Translates to: KLCFWSQPSFPF*PFLGIHGPDTH Trigger: GTGGGTATCAGGGCCGTGGATACCGAGGAAGGGCCAAAATGGGAAGCTGGGTTGGCTCCAGAAACAGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | AAGTTGTCTCCTGGGTCTGACCCGTATTCTGTTCCCTaGACTCCTAGGCTATCAGCCCCCTCCCTGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: KLSPGSDPYSVP*TPRLSAPSLSE Trigger: CTCAGACAGGGAGGGGGCTGATAGCCTAGGAGTTCAGGGAACAGAATACGGGTCAGACCCAGGAGACAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | CTTCCTTCTGTTCACAGGTTCTCAGAGGCTCCCCACTaGTTGCTTCCTCTTCACCGTGCTCCCAGATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPSVHRFSEAPH*LLPLHRAPRSP Trigger: AGGAGATCTGGGAGCACGGTGAAGAGGAAGCAAGCAGTGGGGAGCCTCTGAGAACCTGTGAACAGAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | TTCTTCTGGCTGGCACTGGAGTCCCCTCGGGCTTTGTaGCACTTAGCTCTGGAGTTTCCTCTAGCTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FFWLALESPRAL*HLALEFPLAEE Trigger: CTCTTCAGCTAGAGGAAACTCCAGAGCTAAGTGCCACAAAGCCCGAGGGGACTCCAGTGCCAGCCAGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS CAA 72 bp | TCTCTCTTCTCGTCGACCTCATCCTGCTGGTCTCCCTaGTCAGCCTCTTCTAGGACCCAGACTCTCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLFSSTSSCWSP*SASSRTQTLPV Trigger: TACTGGGAGAGTCTGGGTCCTAGAAGAGGCTGACAAGGGAGACCAGCAGGATGAGGTCGACGAGAAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 90 bp | CCTCTTCTTCCTTCTGTTCACAGGTTCTCAGAGGCTCCCCACTGCTaGCTTCCTCTTCACCGTGCTCCCAGATCTCCTGGGCTGTATTAC | + |
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Preference number: 6 (lower is better) Translates to: PLLPSVHRFSEAPHC*LPLHRAPRSPGLYY Trigger: GTAATACAGCCCAGGAGATCTGGGAGCACGGTGAAGAGGAAGCAAGCAGTGGGGAGCCTCTGAGAACCTGTGAACAGAAGGAAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | GGACTGTGTCTCCTACGAGGTAGGACACAAACGCACTaGAGGAGTCCAGTGCTCCCCTCAAAGCCTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: GLCLLRGRTQTH*RSPVLPSKPDV Trigger: TACATCAGGCTTTGAGGGGAGCACTGGACTCCTTCAGTGCGTTTGTGTCCTACCTCGTAGGAGACACAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000131860.2 |
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| CDS GCA 72 bp | CTCGGTTGCAGTCTGTTCCTTGCCTGCTTCAGCATCTaGTTTTACCTCCTGGCTATTTCTGCGGTCCACACC | + |
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Preference number: 6 (lower is better) Translates to: LGCSLFLACFSI*FYLLAISAVHT Trigger: GGTGTGGACCGCAGAAATAGCCAGGAGGTAAAAGCAGATGCTGAAGCAGGCAAGGAACAGACTGCAACCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | GGATCTCCACTGCCTGCTCGGTTGCAGTCTGTTCCTTaGCTGCTTCAGCATCTGCTTTTACCTCCTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: GSPLPARLQSVP*LLQHLLLPPGY Trigger: ATAGCCAGGAGGTAAAAGCAGATGCTGAAGCAGGCAAGGAACAGACTGCAACCGAGCAGGCAGTGGAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | CACCCCCAGGTCTGTTCACCAGCTAAACTTCCTTCTTaGCATCTTCTAGTCTCTTCGGGTGCTTCTACCCCC | + |
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Preference number: 6 (lower is better) Translates to: HPQVCSPAKLPS*HLLVSSGASTP Trigger: GGGGGTAGAAGCACCCGAAGAGACTAGAAGATGCCAAGAAGGAAGTTTAGCTGGTGAACAGACCTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | GTCCTGTCCTTCAGTGACCTTTACTCTCAATACCTCTaGTGTCATCTGGGCGGCTTCACTCCTCTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VLSFSDLYSQYL*CHLGGFTPLSH Trigger: GTGGGAGAGAGGAGTGAAGCCGCCCAGATGACACCAGAGGTATTGAGAGTAAAGGTCACTGAAGGACAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 72 bp | CTCAGCCAAATAACTGGTCTCTGTGTCCTCACTGTCTaGCAGGCTCAGAGTCACCTCCTCCAGCCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSQITGLCVLTV*QAQSHLLQPPL Trigger: AAGAGGAGGCTGGAGGAGGTGACTCTGAGCCTGCAAGACAGTGAGGACACAGAGACCAGTTATTTGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS TCA 72 bp | GGGAATGTCTCACCAGCTCAGGGTCCTGTCCTTCAGTaGCCTTTACTCTCAATACCTCTGGTGTCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GNVSPAQGPVLQ*PLLSIPLVSSG Trigger: CCCAGATGACACCAGAGGTATTGAGAGTAAAGGTCACTGAAGGACAGGACCCTGAGCTGGTGAGACATTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | CTCCACTGCCTGCTCGGTTGCAGTCTGTTCCTTGCCTaGTTCAGCATCTGCTTTTACCTCCTGGCTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: LHCLLGCSLFLA*FSICFYLLAIS Trigger: AGAAATAGCCAGGAGGTAAAAGCAGATGCTGAAGCAGGCAAGGAACAGACTGCAACCGAGCAGGCAGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 72 bp | TTTTTCTTCTGGCTGGCACTGGAGTCCCCTCGGGCTTaGTGGCACTTAGCTCTGGAGTTTCCTCTAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FFFWLALESPRA*WHLALEFPLAE Trigger: TTCAGCTAGAGGAAACTCCAGAGCTAAGTGCCACAAAGCCCGAGGGGACTCCAGTGCCAGCCAGAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039522.8 ENSMUST00000137646.8 ENSMUST00000138558.3 ENSMUST00000144173.2 |
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| CDS CAA 90 bp | CCATCCCTCATTGGGACCATCCTCTCCTCTTCCTTGTCAATCCCTTaGGCACCAAACCATTCGATTTCTGCAACCATGTCTTTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: PSLIGTILSSSLSIP*APNHSISATMSLAT Trigger: GGTGGCCAAAGACATGGTTGCAGAAATCGAATGGTTTGGTGCCAAAGGGATTGACAAGGAAGAGGAGAGGATGGTCCCAATGAGGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 90 bp | AATAATCTCCTCAGCCAAATAACTGGTCTCTGTGTCCTCACTGTCTaGCAGGCTCAGAGTCACCTCCTCCAGCCTCCTCTTCCTGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NNLLSQITGLCVLTV*QAQSHLLQPPLPAS Trigger: ACTTGCAGGAAGAGGAGGCTGGAGGAGGTGACTCTGAGCCTGCAAGACAGTGAGGACACAGAGACCAGTTATTTGGCTGAGGAGATTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039522.8 ENSMUST00000138558.3 |
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| CDS CCA 72 bp | CCTCTCTCCCACAAACAACTCCTCAGTGCTGACTTCTaGAGAGTCTTCCCAGTCAGGTTCATCTTTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLSHKQLLSADF*RVFPVRFIFSL Trigger: GAGGCTAAAGATGAACCTGACTGGGAAGACTCTCCAGAAGTCAGCACTGAGGAGTTGTTTGTGGGAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | TCAGTGACCTTTACTCTCAATACCTCTGGTGTCATCTaGGCGGCTTCACTCCTCTCTCCCACAAACAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVTFTLNTSGVI*AASLLSPTNNS Trigger: GGAGTTGTTTGTGGGAGAGAGGAGTGAAGCCGCCCAGATGACACCAGAGGTATTGAGAGTAAAGGTCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | TGTTCCTTGCCTGCTTCAGCATCTGCTTTTACCTCCTaGCTATTTCTGCGGTCCACACCCCTACTCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSLPASASAFTS*LFLRSTPLLQF Trigger: AAACTGGAGTAGGGGTGTGGACCGCAGAAATAGCCAGGAGGTAAAAGCAGATGCTGAAGCAGGCAAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 90 bp | CTTGCCCTTTCACCATCCCTCATTGGGACCATCCTCTCCTCTTCCTaGTCAATCCCTTTGGCACCAAACCATTCGATTTCTGCAACCATG | + |
|
Preference number: 6 (lower is better) Translates to: LALSPSLIGTILSSS*SIPLAPNHSISATM Trigger: CATGGTTGCAGAAATCGAATGGTTTGGTGCCAAAGGGATTGACAAGGAAGAGGAGAGGATGGTCCCAATGAGGGATGGTGAAAGGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | CCCGTACCTCTTCTTCTAGACTCACTCCATTATCCCTaGTGGCTAAGTCTTGCCTCTCCTCATCCTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVPLLLDSLHYP*WLSLASPHPQS Trigger: GCTTTGAGGATGAGGAGAGGCAAGACTTAGCCATCAGGGATAATGGAGTGAGTCTAGAAGAAGAGGTACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | CTTCACTCCTCTCTCCCACAAACAACTCCTCAGTGCTaGCTTCTGGAGAGTCTTCCCAGTCAGGTTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LHSSLPQTTPQC*LLESLPSQVHL Trigger: AAGATGAACCTGACTGGGAAGACTCTCCAGAAGTCAGCACTGAGGAGTTGTTTGTGGGAGAGAGGAGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | TCTAGACTCACTCCATTATCCCTGATGGCTAAGTCTTaGCTCTCCTCATCCTCAAAGCTGCCCTCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLTPLSLMAKS*LSSSSKLPSVS Trigger: GGAAACAGAGGGCAGCTTTGAGGATGAGGAGAGGCAAGACTTAGCCATCAGGGATAATGGAGTGAGTCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | CCCTTCTGTCCTTCCTCAAGTTGTTTAGTTAAAGCCTaGGAATGTCTCACCAGCTCAGGGTCCTGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PFCPSSSCLVKA*ECLTSSGSCPS Trigger: TGAAGGACAGGACCCTGAGCTGGTGAGACATTCCCAGGCTTTAACTAAACAACTTGAGGAAGGACAGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | TCTGGGCTCAGGTCTGGAGCTCCACTAGTCTCTTCCTaGCCCTTCTGTCCTTCCTCAAGTTGTTTAGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGLRSGAPLVSS*PFCPSSSCLVK Trigger: TTTAACTAAACAACTTGAGGAAGGACAGAAGGGTCAGGAAGAGACTAGTGGAGCTCCAGACCTGAGCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | CCTTATGTCTTCTGCCATTACAGATGTCTCCATCTCTaGCTGCTCCCCCTCTTCAGTCCCATCAATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PYVFCHYRCLHL*LLPLFSPINFL Trigger: CAAGAAATTGATGGGACTGAAGAGGGGGAGCAGGCAGAGATGGAGACATCTGTAATGGCAGAAGACATAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CCA 72 bp | TGGCACCAAACCATTCGATTTCTGCAACCATGTCTTTaGCCACCCAGTCTATCTCTTTGCTGTCCTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WHQTIRFLQPCL*PPSLSLCCPLS Trigger: TGACAGAGGACAGCAAAGAGATAGACTGGGTGGCCAAAGACATGGTTGCAGAAATCGAATGGTTTGGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 72 bp | TCACCATCCCTCATTGGGACCATCCTCTCCTCTTCCTaGTCAATCCCTTTGGCACCAAACCATTCGATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSLIGTILSSS*SIPLAPNHSIS Trigger: AGAAATCGAATGGTTTGGTGCCAAAGGGATTGACAAGGAAGAGGAGAGGATGGTCCCAATGAGGGATGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS TCA 72 bp | AATTTCTTGGATATCATAGCCAGACACCTTCTCTGCTaGGCCCACCAAGCCAACTTCCTGTCCACTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NFLDIIARHLLC*AHQANFLSTLL Trigger: AAGCAAAGTGGACAGGAAGTTGGCTTGGTGGGCTCAGCAGAGAAGGTGTCTGGCTATGATATCCAAGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | ATGTCTTCTGCCATTACAGATGTCTCCATCTCTGCCTaGTCCCCCTCTTCAGTCCCATCAATTTCTTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: MSSAITDVSISA*SPSSVPSISWI Trigger: TATCCAAGAAATTGATGGGACTGAAGAGGGGGAGCAGGCAGAGATGGAGACATCTGTAATGGCAGAAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS CAA 72 bp | ATTGGGACCATCCTCTCCTCTTCCTTGTCAATCCCTTaGGCACCAAACCATTCGATTTCTGCAACCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: IGTILSSSLSIP*APNHSISATMS Trigger: AGACATGGTTGCAGAAATCGAATGGTTTGGTGCCAAAGGGATTGACAAGGAAGAGGAGAGGATGGTCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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| CDS GCA 72 bp | CTTGTCAATCCCTTTGGCACCAAACCATTCGATTTCTaGAACCATGTCTTTGGCCACCCAGTCTATCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVNPFGTKPFDF*NHVFGHPVYLF Trigger: AAAGAGATAGACTGGGTGGCCAAAGACATGGTTGCAGAAATCGAATGGTTTGGTGCCAAAGGGATTGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039522.8 |
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