Pregenerated sensors for APOA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032079Ensembl transcript IDs: ENSMUST00000034584.4, ENSMUST00000121598.8, ENSMUST00000213878.2, ENSMUST00000214202.2, ENSMUST00000215187.2, ENSMUST00000215458.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACAGAGTCTGCACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCTaGGTGAGGAGCGACACTGCGGTGCAGCTCCTGCACGTGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: GQSLHAATESRGAGS*VRSDTAVQLLHVVP Trigger: GGGCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCTGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR TCA 90 bp | AGAGTCTGCACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCTGCGTaGGGAGCGACACTGCGGTGCAGCTCCTGCACGTGGTGCCCAATT | + |
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Preference number: 1 (lower is better) Translates to: RVCTQRLSRAGLAAA*GATLRCSSCTWCPI Trigger: AATTGGGCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR CCA 90 bp | AGGGGCTCTGCCCGGTCCCATCACTGGACCCACCAGCAGGACCACTaGCAGGGACGTACACACTCCATCACATGTTCTCTGCATCATGCT | + |
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Preference number: 1 (lower is better) Translates to: RGSARSHHWTHQQDH*QGRTHSITCSLHHA Trigger: AGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCCTGCCAGTGGTCCTGCTGGTGGGTCCAGTGATGGGACCGGGCAGAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR GCA 90 bp | CCAGGTTGTAGTGGCATGGGTTTCCAGCACGGTCAAGCACTGGCTTaGGGTCAGTCACCCCACACACCATCTCCCACTCCTGTCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: PGCSGMGFQHGQALA*GQSPHTPSPTPVTS Trigger: TGAGGTGACAGGAGTGGGAGATGGTGTGTGGGGTGACTGACCGCAAGCCAGTGCTTGACCGTGCTGGAAACCCATGCCACTACAACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR CCA 90 bp | CGGATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTTaGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTGAGTTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: RMKALSSSRSWSRLR*MLVCRSFALRVSLW Trigger: CCACAAACTCACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCATCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR GCA 90 bp | GTGCAGCTCCTGCACGTGGTGCCCAATTCCAGTCACCAAGCGTTCTaGGTAAGGGTGGAAGAGCTCTTTGACTCGGTCGGTATGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VQLLHVVPNSSHQAF*VRVEELFDSVGMVQ Trigger: CTGCACCATACCGACCGAGTCAAAGAGCTCTTCCACCCTTACGCAGAACGCTTGGTGACTGGAATTGGGCACCACGTGCAGGAGCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
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| 3UTR TCA 90 bp | ACTGTGGAACAAGACAGCCTCCTCCCCACCCAACCCCATCAAATGTaGCAGCCATTGTCTAGCCAGGAGTCCTACGGCAGAACTCGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TVEQDSLLPTQPHQM*QPLSSQESYGRTRP Trigger: TGGGCGAGTTCTGCCGTAGGACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGCTGTCTTGTTCCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 90 bp | TCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATaGCAGCCCTGGGGAGACAGGAGTTCCTCTCCGTGGACCAACTGT | + |
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Preference number: 1 (lower is better) Translates to: SASCSPPAPFQQKLS*QPWGDRSSSPWTNC Trigger: ACAGTTGGTCCACGGAGAGGAACTCCTGTCTCCCCAGGGCTGTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 90 bp | CAATTCCAGTCACCAAGCGTTCTGCGTAAGGGTGGAAGAGCTCTTTaGCTCGGTCGGTATGGTGCAGCACTCGACTCTGCATGTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QFQSPSVLRKGGRAL*LGRYGAALDSACPA Trigger: TGCAGGACATGCAGAGTCGAGTGCTGCACCATACCGACCGAGTCAAAGAGCTCTTCCACCCTTACGCAGAACGCTTGGTGACTGGAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
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| 3UTR CCA 90 bp | CAGGCTGCGAGAATTAATCCACGCTGTCCTGTGATCCGTAGACTGTaGAACAAGACAGCCTCCTCCCCACCCAACCCCATCAAATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: QAARINPRCPVIRRL*NKTASSPPNPIKCD Trigger: GTCACATTTGATGGGGTTGGGTGGGGAGGAGGCTGTCTTGTTCCACAGTCTACGGATCACAGGACAGCGTGGATTAATTCTCGCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 90 bp | TCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATaGCAACCCTGGGGAGACAGGAGTTCCTCTCCATGGACCAACTGT | + |
|
Preference number: 1 (lower is better) Translates to: SASCSPPAPFQQKLS*QPWGDRSSSPWTNC Trigger: ACAGTTGGTCCATGGAGAGGAACTCCTGTCTCCCCAGGGTTGTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR GCA 90 bp | AGCAGGACCACTGGCAGGGACGTACACACTCCATCACATGTTCTCTaGATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATG | + |
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Preference number: 1 (lower is better) Translates to: SRTTGRDVHTPSHVL*IMLSSCSLPTKALM Trigger: CATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCCTGCCAGTGGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR CCA 90 bp | GGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTGCTCTCAGACATaGTCCAATGAGAGTCACGCCAGACCAACAACGTTCCATCACGAG | + |
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Preference number: 1 (lower is better) Translates to: GGCVLRQRGNNCSQT*SNESHARPTTFHHE Trigger: CTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR GCA 90 bp | GTCAGTCACCCCACACACCATCTCCCACTCCTGTCACCTCACTCTTaGTACTTAGGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: VSHPTHHLPLLSPHS*YLGLPNEYQKLGLQ Trigger: TTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAGATGGTGTGTGGGGTGACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR GCA 90 bp | GTACAAGTGGATGGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTaGTCTCAGACATGGTCCAATGAGAGTCACGCCAGACCAACAACG | + |
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Preference number: 1 (lower is better) Translates to: VQVDGGCVLRQRGNN*SQTWSNESHARPTT Trigger: CGTTGTTGGTCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCATCCACTTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR GCA 90 bp | CAGGGAGAGCATGTTTCCCCATTACACACTCCATCACATGTTCTCTaGATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATG | + |
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Preference number: 1 (lower is better) Translates to: QGEHVSPLHTPSHVL*IMLSSCSLPTKALM Trigger: CATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 90 bp | TCTCCCACTCCTGTCACCTCACTCTTGCTACTTAGGATTGCCAAATaGGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGCC | + |
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Preference number: 1 (lower is better) Translates to: SPTPVTSLLLLRIAK*VPEAGFAKPTECNA Trigger: GGCATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 90 bp | ACAGAAAGAGCAAGTGAGGGGTACAAGTGGATGGTGGGTGTGTTCTaGGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATGAGA | + |
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Preference number: 1 (lower is better) Translates to: TERASEGYKWMVGVF*DRGETIALRHGPMR Trigger: TCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCATCCACTTGTACCCCTCACTTGCTCTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 90 bp | TGTTCTGAGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATaGGAGTCACGCCAGACCAACAACGTTCCATCACGAGCATCTATT | + |
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Preference number: 1 (lower is better) Translates to: CSETEGKQLLSDMVQ*ESRQTNNVPSRASI Trigger: AATAGATGCTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGTGAGTTTGTGGGACAGAGTCTGCACGCAGCGACTGAGTCGCGCGGGGCTGGGAGCGACACTGCGGTaGAGCTCCTGCACGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RVSLWDRVCTQRLSRAGLGATLR*SSCTWC Trigger: GCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCC...CAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAAACTCACACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTCTGCACGCAGCGACTaGGTCGCGCGGGGCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MKALSSSRSWSRLRWMLVSARSD*VARGWQ Trigger: CTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGA...CACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGACGCGGATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTTGCTGCGGTGCAGCTCCTaGACGTGGTGCCCAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: ADADEGTELIAQLVQVALLRCSS*TWCPIP Trigger: TGGAATTGGGCACCACGTGCAGGAGCTGCACCGCAG...CAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCATCCGCGTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR CAA 90 bp | TTGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTGAGTTaGTGGGACAGAGTCTGCACGCAGCGACTGAGTCGCGCGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LRWMLVCRSFALRVS*WDRVCTQRLSRAGL Trigger: CAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAAACTCACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR CAA 90 bp | CTGACGCGGATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTaGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LTRMKALSSSRSWSR*RWMLVCRSFALRVS Trigger: ACTCACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCATCCGCGTCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCGACACTGCGGTGCAGCTCCTGCACGTGGTGCCCAATTCCAGTCACCAAGGGTGGAAGAGCTCTTTaGCTCGGTCGGTATGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: GATLRCSSCTWCPIPVTKGGRAL*LGRYGA Trigger: TGCACCATACCGACCGAGTCAAAGAGCTCTTCCACC...CTTGGTGACTGGAATTGGGCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
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| 3UTR CAA 90 bp | GCGGATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTaGGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTGAGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: ADEGTELIAQLVQVA*DAGVQVLRLTCEFV Trigger: CACAAACTCACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCATCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR-3UTR GCA 90 bp | TCGCGCAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTATGCAGCACTCGACTCTaGATGTCCTGCAGCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SRSWSRLRWMLVCRSFALCSTRL*MSCSRF Trigger: GAACCTGCTGCAGGACATGCAGAGTCGAGTGCTGCA...TAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCTCCCCACCCAACCCCATCAAATGTGACAGCCATTGTCTAGCCAGGAGTATGTTCTCTGCATCATaGTCTCCTCCTGCTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: ASSPPNPIKCDSHCLARSMFSAS*SPPAPF Trigger: GAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACAT...ACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR TCA 90 bp | GGGATCCTTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCACAACAAAAGCTCTCATaGCAACCCTGGGGAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: GILQGFQGEHVSPLHTPSQQKLS*QPWGDR Trigger: CCTGTCTCCCCAGGGTTGTCATGAGAGCTTTTGTTG...TGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAAGGATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCAGAACTCGCCCAGAGTaGACCAAGAATGGAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PHYTLHHMFSASCSPPAPRTRPE*TKNGKE Trigger: CTCTTTTCCATTCTTGGTCCACTCTGGGCGAGTTCT...GGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATCCTTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCAGGTACAAGTGGATGGTaGGTGTGTTCTGAGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: GILQGFQGEHVSPLHTPSGTSGW*VCSETE Trigger: CTCTGTCTCAGAACACACCCACCATCCACTTGTACC...TGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAAGGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR CAA 90 bp | ACACACCATCTCCCACTCCTGTCACCTCACTCTTGCTACTTAGGATaGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: THHLPLLSPHSCYLG*PNEYQKLGLQSLLS Trigger: ACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAGATGGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCACATGTTCAGGGGTACAAGTGGATaGTGGGTGTGTTCTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: FRDFRESMFPHYTLHHMFRGTSG*WVCSET Trigger: TGTCTCAGAACACACCCACCATCCACTTGTACCCCT...GAACATGTGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGGAAGACAGAAAGAGCAAGTaGGGGGTACAAGTGGATGGT | + |
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Preference number: 2 (lower is better) Translates to: ESFYQSQEESQAGMRNLEDRKSK*GVQVDG Trigger: ACCATCCACTTGTACCCCTCACTTGCTCTTTCTGTC...TTCCAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGGAACAACCCCATCAAATGTaGCAGCCATTGTCTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ESFYQSQEESQAGMRNLEQPHQM*QPLSSQ Trigger: CTGGCTAGACAATGGCTGTCACATTTGATGGGGTTG...TTCCAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGGAAAGGAGTTCCTCTCCATaGACCAACTGTAACAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ESFYQSQEESQAGMRNLERSSSP*TNCNSQ Trigger: CTGGCTGTTACAGTTGGTCCATGGAGAGGAACTCCT...TTCCAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGGGTACAAGTGGATGGTaGGTGTGTTCTGAGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RESFYQSQEESQAGMRNLGTSGW*VCSETE Trigger: CTCTGTCTCAGAACACACCCACCATCCACTTGTACC...CAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAACCATCACATGTTCTCTaGATCATGCTCTCCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SKREFLSIPRRESSRHEEPSHVL*IMLSSC Trigger: GCAGGAGGAGAGCATGATGCAGAGAACATGTGATGG...TTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| 3UTR TCA 72 bp | ACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCTGCGTaGGGAGCGACACTGCGGTGCAGCTCCTGCACGTGG | + |
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Preference number: 3 (lower is better) Translates to: TQRLSRAGLAAA*GATLRCSSCTW Trigger: CCACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCCCGCGCGACTCAGTCGCTGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR GCA 72 bp | CTGCACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCTaGGTGAGGAGCGACACTGCGGTGCAGCTCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: LHAATESRGAGS*VRSDTAVQLLH Trigger: GTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR GCA 72 bp | GTCGCGCGGGGCTGGCAGCTGCGTGAGGAGCGACACTaGGGTGCAGCTCCTGCACGTGGTGCCCAATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VARGWQLREERH*GAAPARGAQFQ Trigger: CTGGAATTGGGCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCCCGCGCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR TCA 72 bp | GCCTGCAGTCTCTGGCGGACCTCCTCGGAGAGAGCCTaGGGGTCCAGGGAATCTCCATCTTCCGCCCCATCT | + |
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Preference number: 3 (lower is better) Translates to: ACSLWRTSSERA*GSRESPSSAPS Trigger: AGATGGGGCGGAAGATGGAGATTCCCTGGACCCTCAGGCTCTCTCCGAGGAGGTCCGCCAGAGACTGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213878.2 |
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| 3UTR GCA 72 bp | TCCTTCGCCTTACGTGTGAGTTTGTGGGACAGAGTCTaGACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SFALRVSLWDRV*TQRLSRAGLAA Trigger: AGCTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAAACTCACACGTAAGGCGAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR CCA 72 bp | CTGACGCGGATGAAGGCACTGAGCTCATCGCGCAGCTaGTCCAGGTTGCGTTGGATGCTGGTGTGCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LTRMKALSSSRS*SRLRWMLVCRS Trigger: GGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCATCCGCGTCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| 3UTR CCA 72 bp | GCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTTaGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALSSSRSWSRLR*MLVCRSFALRV Trigger: CACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| 3UTR GCA 72 bp | CAGCACCTTTGGTGGTGTGCAGGACCCTCCACCCTCTaGCTAATAGACCATGCTAGCGGCTCAGGGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QHLWWCAGPSTL*LIDHASGSGSR Trigger: TCTGGACCCTGAGCCGCTAGCATGGTCTATTAGGCAGAGGGTGGAGGGTCCTGCACACCACCAAAGGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | TCTTTGACTCGGTCGGTATGGTGCAGCACTCGACTCTaGATGTCCTGCAGCAGGTTCAGCGCCTCGTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: SLTRSVWCSTRL*MSCSRFSASST Trigger: CGTGGACGAGGCGCTGAACCTGCTGCAGGACATGCAGAGTCGAGTGCTGCACCATACCGACCGAGTCAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
||
| 3UTR GCA 72 bp | TCGCGCAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTaGAGGTCCTTCGCCTTACGTGTGAGTTTGTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRSWSRLRWMLV*RSFALRVSLWD Trigger: GTCCCACAAACTCACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| 3UTR CCA 72 bp | AGGAGGCTGGGTAGGTTGGGACAGCAGCACCTTTGGTaGTGTGCAGGACCCTCCACCCTCTGCCTAATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RRLGRLGQQHLW*CAGPSTLCLID Trigger: GTCTATTAGGCAGAGGGTGGAGGGTCCTGCACACCACCAAAGGTGCTGCTGTCCCAACCTACCCAGCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTGGCCTTACGTGTGAGTTaGTGGGACAGAGTCTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: EGTELIAQLVQVALDAGVALRVS*WDRVCT Trigger: CGTGCAGACTCTGTCCCACAAACTCACACGTAAGGC...CACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| 3UTR TCA 72 bp | TGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATaGCAGCCCTGGGGAGACAGGAGTTCCTCTCCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSPPAPFQQKLS*QPWGDRSSSPW Trigger: CCACGGAGAGGAACTCCTGTCTCCCCAGGGCTGTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR CCA 72 bp | TTGAGGAGGCTGGGTAGGTTGGGACAGCAGCACCTTTaGTGGTGTGCAGGACCCTCCACCCTCTGCCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: LRRLGRLGQQHL*WCAGPSTLCLI Trigger: TATTAGGCAGAGGGTGGAGGGTCCTGCACACCACCAAAGGTGCTGCTGTCCCAACCTACCCAGCCTCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | CTGCACGTGGTGCCCAATTCCAGTCACCAAGCGTTCTaGGTAAGGGTGGAAGAGCTCTTTGACTCGGTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHVVPNSSHQAF*VRVEELFDSVG Trigger: ACCGACCGAGTCAAAGAGCTCTTCCACCCTTACGCAGAACGCTTGGTGACTGGAATTGGGCACCACGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
||
| 3UTR TCA 72 bp | TGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATaGCAACCCTGGGGAGACAGGAGTTCCTCTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: CSPPAPFQQKLS*QPWGDRSSSPW Trigger: CCATGGAGAGGAACTCCTGTCTCCCCAGGGTTGTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR TCA 72 bp | TCACCAAGCGTTCTGCGTAAGGGTGGAAGAGCTCTTTaGCTCGGTCGGTATGGTGCAGCACTCGACTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPSVLRKGGRAL*LGRYGAALDSA Trigger: TGCAGAGTCGAGTGCTGCACCATACCGACCGAGTCAAAGAGCTCTTCCACCCTTACGCAGAACGCTTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGGGGACAGCAGCACCTTaGGTGGTGTGCAGGACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLPNEYQKLGLQSLLSVMGTAAP*VVCRTL Trigger: GAGGGTCCTGCACACCACCAAAGGTGCTGCTGTCCC...CATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCTCTCATGACAGCCCTGGGGAGACAGGAGTTCCTCTCCGTGGACCAACTGTACCAGAAGCTGGGTTaGCAAAGCCTACTGAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KALMTALGRQEFLSVDQLYQKLG*QSLLSV Trigger: TACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTA...CAGTTGGTCCACGGAGAGGAACTCCTGTCTCCCCAGGGCTGTCATGAGAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACCAGGCTGCGAGAATTAACAGGAGCCCAACTCCAGGTTGTAGTGGCATGCCTGTCACCTCACTCTaGCTACTTAGGATTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QHQAARINRSPTPGCSGMPVTSL*LLRIAK Trigger: TTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGG...CATGCCACTACAACCTGGAGTTGGGCTCCTGTTAATTCTCGCAGCCTGGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | CCCACACACCATCTCCCACTCCTGTCACCTCACTCTTaGTACTTAGGATTGCCAAATGAGTACCAGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTHHLPLLSPHS*YLGLPNEYQKL Trigger: CAGCTTCTGGTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAGATGGTGTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | GGGACGTACACACTCCATCACATGTTCTCTGCATCATaGTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTYTLHHMFSAS*SPPAPFQQKLS Trigger: TGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | ACTGGCAGGGACGTACACACTCCATCACATGTTCTCTaGATCATGCTCTCCTCCTGCTCCCTTCCAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGRDVHTPSHVL*IMLSSCSLPTK Trigger: TTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCCTGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | GATGGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTaGTCTCAGACATGGTCCAATGAGAGTCACGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DGGCVLRQRGNN*SQTWSNESHAR Trigger: TCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | ACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTaGTCCCTTCCAACAAAAGCTCTCATGACAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TPSHVLCIMLSS*SLPTKALMTAL Trigger: CAGGGCTGTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATGGGACAGCAGCACCTTaGGTGGTGTGCAGGACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRESFYQSQEESQAGMRNGTAAP*VVCRTL Trigger: GAGGGTCCTGCACACCACCAAAGGTGCTGCTGTCCC...ATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR TCA 72 bp | ACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATaGGAGTCACGCCAGACCAACAACGTTCCATCACGA | + |
|
Preference number: 3 (lower is better) Translates to: TEGKQLLSDMVQ*ESRQTNNVPSR Trigger: TCGTGATGGAACGTTGTTGGTCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | CCCCATTACACACTCCATCACATGTTCTCTGCATCATaGTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PHYTLHHMFSAS*SPPAPFQQKLS Trigger: TGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR CCA 72 bp | GTTCTGAGACAGAGGGGAAACAATTGCTCTCAGACATaGTCCAATGAGAGTCACGCCAGACCAACAACGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLRQRGNNCSQT*SNESHARPTTF Trigger: GAACGTTGTTGGTCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR CCA 72 bp | AGACAGAAAGAGCAAGTGAGGGGTACAAGTGGATGGTaGGTGTGTTCTGAGACAGAGGGGAAACAATTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RQKEQVRGTSGW*VCSETEGKQLL Trigger: GAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCATCCACTTGTACCCCTCACTTGCTCTTTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATACCAGAAGCTGGGTTaGCAAAGCCTACTGAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WWVCSETEGKQLLSDMVQYQKLG*QSLLSV Trigger: TACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTA...TTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | AATTTCCTCTGTCTCCTGGTCAATGGCCTGAGTAAATaGAGCAATCTGCAGGTAGGTGTCATGCCGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: NFLCLLVNGLSK*SNLQVGVMPKS Trigger: GCTTTTCGGCATGACACCTACCTGCAGATTGCTGCATTTACTCAGGCCATTGACCAGGAGACAGAGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213878.2 |
||
| 3UTR CCA 72 bp | AAGAGACAGAAAGAGCAAGTGAGGGGTACAAGTGGATaGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTG | + |
|
Preference number: 3 (lower is better) Translates to: KRQKEQVRGTSG*WVCSETEGKQL Trigger: CAATTGTTTCCCCTCTGTCTCAGAACACACCCACCATCCACTTGTACCCCTCACTTGCTCTTTCTGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR TCA 72 bp | GTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATaGGGAATCTGGAACATGGGACCAAGGGTAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFINPKKRVKQA*GIWNMGPRVRG Trigger: TCCCCTTACCCTTGGTCCCATGTTCCAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR GCA 72 bp | CATGTTTCCCCATTACACACTCCATCACATGTTCTCTaGATCATGCTCTCCTCCTGCTCCCTTCCAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HVSPLHTPSHVL*IMLSSCSLPTK Trigger: TTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGGAAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR TCA 72 bp | CATCTATTTCATTCCAACCAAAAGTCAGTTCCACCCTaGGAGTCAGGAGGTAGGGACTGTATGATGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLFHSNQKSVPP*ESGGRDCMMRK Trigger: CTTCCTCATCATACAGTCCCTACCTCCTGACTCTCAGGGTGGAACTGACTTTTGGTTGGAATGAAATAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGCTGCGTGAGGAGCGACACTGCGGTGCAGCTCCTGCACGTGGTGCCCCCAGAGGCTCTTCCGTaGCTGAGTGCTTGCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AGSCVRSDTAVQLLHVVPPEALP*LSACEH Trigger: GTGTTCGCAAGCACTCAGGCACGGAAGAGCCTCTGG...GGGCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGTGGGACAGAGTCTGCACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCGCCAGCTTCTGTGGCTaGCCCATCACGCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EFVGQSLHAATESRGAGSASFCG*PITPLL Trigger: GAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGC...GCTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAAACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTCCCCACCCAACCCCATCAAATGTGACAGCCATTGTCTAGCCAGGAGTGGGCTGGCAGCTGCGTaGGGAGCGACACTGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPPNPIKCDSHCLARSGLAAA*GATLRC Trigger: GCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCC...ACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTGTGGGACAGAGTCTGCACGCAGCGACTGAGTCGCGCGGGGCTGGCAGCTGCCAGCTTCTGTGGCTaGCCCATCACGCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLWDRVCTQRLSRAGLAAASFCG*PITPLL Trigger: GAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGC...AGCTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTGCAGGACCCTCCACCCTCTGCCTAATAGACCATGCTAGCGGCTCAGGGCGACTCTGCATGTCCTaGAGCAGGTTCAGCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WCAGPSTLCLIDHASGSGRLCMS*SRFSAS Trigger: CGAGGCGCTGAACCTGCTGCAGGACATGCAGAGTCG...CCCTGAGCCGCTAGCATGGTCTATTAGGCAGAGGGTGGAGGGTCCTGCACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTCCCCACCCAACCCCATCAAATGTGACAGCCATTGTCTAGCCAGGAGTGGAGCGACACTGCGGTaGAGCTCCTGCACGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPPNPIKCDSHCLARSGATLR*SSCTWC Trigger: GCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCC...ACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR CAA 72 bp | GGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTaGGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTELIAQLVQVA*DAGVQVLRLTC Trigger: ACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCACTGGCTTGCGGTCAGTCACCCCACACACCATCTCCCACTCCTGTCACCTCGTCCAGTCGGCTCTaGAGTCTGCTCAGGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QALACGQSPHTPSPTPVTSSSRL*SLLRAL Trigger: TAAGGCCCTGAGCAGACTGCAGAGCCGACTGGACGA...GGTGACAGGAGTGGGAGATGGTGTGTGGGGTGACTGACCGCAAGCCAGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | TGGACCCACCAGCAGGACCACTGGCAGGGACGTACACACTCCATCACATGTTCTTCCTCGGAGAGAGCCTaGGGGTCCAGGGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WTHQQDHWQGRTHSITCSSSERA*GSRESP Trigger: TGGAGATTCCCTGGACCCTCAGGCTCTCTCCGAGGA...AGAACATGTGATGGAGTGTGTACGTCCCTGCCAGTGGTCCTGCTGGTGGGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGGTCCAGGTTGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTGTCCCCCAGCTCCTGCTaGAGCTGTTTCCGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWSRLRWMLVCRSFALRVSPSSC*SCFRMP Trigger: AGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGA...CACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213878.2 |
||
| CDS-3UTR GCA 90 bp | TCGCGCAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTAACTTCCCCCAGCTCCTaGTGCAGCTGTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SRSWSRLRWMLVCRSFALTSPSS*CSCFRM Trigger: CATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAAGT...TAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213878.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTGCAGGACCCTCCACCCTCTGCCTAATAGACCATGCTAGCGGCTCAGGGTGCAGCACTCGACTCTaGATGTCCTGCAGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WCAGPSTLCLIDHASGSGCSTRL*MSCSRF Trigger: GAACCTGCTGCAGGACATGCAGAGTCGAGTGCTGCA...CCCTGAGCCGCTAGCATGGTCTATTAGGCAGAGGGTGGAGGGTCCTGCACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | CATCTCCCACTCCTGTCACCTCACTCTTGCTACTTAGGATTGCCAAATGAGTACGGGCTGGCAGCTGCGTaGGGAGCGACACTGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPLLSPHSCYLGLPNEYGLAAA*GATLRC Trigger: GCACCGCAGTGTCGCTCCTCACGCAGCTGCCAGCCC...GTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCACGCCAGACCAACAACGTTCCATCACGAGCATCTATTTCATTCCAACCTCTGCACGCAGCGACTaGGTCGCGCGGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTPDQQRSITSIYFIPTSARSD*VARGWQ Trigger: CTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGA...GGTTGGAATGAAATAGATGCTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGCCCCTGAGTTCTGCACGCAGCGACTaGGTCGCGCGGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEYQKLGLQSLLSVMPLSSARSD*VARGWQ Trigger: CTGCCAGCCCCGCGCGACTCAGTCGCTGCGTGCAGA...ACTCAGGGGCATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCATGACAGCCCTGGGGAGACAGGAGTTCCTCTCCGTGGACCAACTGTCCCCCAGCTCCTGCTaGAGCTGTTTCCGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KALMTALGRQEFLSVDQLSPSSC*SCFRMP Trigger: AGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGA...CAGTTGGTCCACGGAGAGGAACTCCTGTCTCCCCAGGGCTGTCATGAGAGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACCAGGCTGCGAGAATTAACAGGAGCCCAACTCCAGGTTGTAGTGGCATGCTGCGGTGCAGCTCCTaGACGTGGTGCCCAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHQAARINRSPTPGCSGMLRCSS*TWCPIP Trigger: TGGAATTGGGCACCACGTGCAGGAGCTGCACCGCAG...CATGCCACTACAACCTGGAGTTGGGCTCCTGTTAATTCTCGCAGCCTGGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCATGACAACCCTGGGGAGACAGGAGTTCCTCTCCATGGACCAACTGCGTGAGGAGCGACACTaGGGTGCAGCTCCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KALMTTLGRQEFLSMDQLREERH*GAAPAR Trigger: ACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACG...CAGTTGGTCCATGGAGAGGAACTCCTGTCTCCCCAGGGTTGTCATGAGAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACCAGGCTGCGAGAATTAACAGGAGCCCAACTCCAGGTTGTAGTGGCATGGCCAGCTTCTGTGGCTaGCCCATCACGCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHQAARINRSPTPGCSGMASFCG*PITPLL Trigger: GAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGC...CATGCCACTACAACCTGGAGTTGGGCTCCTGTTAATTCTCGCAGCCTGGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR CAA 72 bp | ATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTGAGTTaGTGGGACAGAGTCTGCACGCAGCGACTGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MLVCRSFALRVS*WDRVCTQRLSR Trigger: GCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAAACTCACACGTAAGGCGAAGGACCTGCACACCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| 3UTR CAA 72 bp | ATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTaGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MKALSSSRSWSR*RWMLVCRSFAL Trigger: TAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCACTGGCTTGCGGTCAGTCACCCCACACACCATCTCCCACTCCTGTCACCTCCAACTGTTTTGGCTaGAGTAGTCCCAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QALACGQSPHTPSPTPVTSNCFG*SSPRGS Trigger: AGAGCCTCTGGGACTACTTCAGCCAAAACAGTTGGA...GGTGACAGGAGTGGGAGATGGTGTGTGGGGTGACTGACCGCAAGCCAGTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR TCA 90 bp | GAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTGTCCAACTGTTTTGGCTaGAGTAGTCCCAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGTELIAQLVQVALDAGVSNCFG*SSPRGS Trigger: AGAGCCTCTGGGACTACTTCAGCCAAAACAGTTGGA...CACACCAGCATCCAACGCAACCTGGACCAGCTGCGCGATGAGCTCAGTGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATGAGAGTCACGCCAGACCCACCACGCGCAGCTaGTCCTGCAGCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQRGNNCSQTWSNESHARPTTRS*SCSSCT Trigger: TGTGCAGGAGCTGCAGGAGCAGCTGCGCGTGGTGGG...TCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATGACGGAGCGACACTGCGGTaGAGCTCCTGCACGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLHHALLLLPSNKSSHDGATLR*SSCTWC Trigger: GCACCACGTGCAGGAGCTGCACCGCAGTGTCGCTCC...GTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGTCCAGGTTGCGTTGGATGCTGGTGTGCAGGTCCTTCGCCTTACGTGTTCCAACTGTTTTGGCTaGAGTAGTCCCAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLVQVALDAGVQVLRLTCSNCFG*SSPRGS Trigger: AGAGCCTCTGGGACTACTTCAGCCAAAACAGTTGGA...ACACGTAAGGCGAAGGACCTGCACACCAGCATCCAACGCAACCTGGACCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213878.2 ENSMUST00000215187.2 |
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| CDS-3UTR TCA 90 bp | GCCTCCTCCCCACCCAACCCCATCAAATGTGACAGCCATTGTCTAGCCAGGAGTCCTTCGCCTTACGTGTaGGTTTGTGGGACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSPPNPIKCDSHCLARSPSPYV*VCGTES Trigger: AGACTCTGTCCCACAAACTCACACGTAAGGCGAAGG...ACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGGCAGGGACGTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCAGAGGCTCTTCCGTaGCTGAGTGCTTGCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PLAGTYTLHHMFSASCSPPEALP*LSACEH Trigger: GTGTTCGCAAGCACTCAGGCACGGAAGAGCCTCTGG...AGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCCTGCCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | CAGCACCAGGCTGCGAGAATTAACAGGAGCCCAACTCCAGGTTGTAGTGGCATGACTTCCCCCAGCTCCTaGTGCAGCTGTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QHQAARINRSPTPGCSGMTSPSS*CSCFRM Trigger: CATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAAGT...CATGCCACTACAACCTGGAGTTGGGCTCCTGTTAATTCTCGCAGCCTGGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTCACGCCAGACCAACAACGTTCCATCACGAGCATCTATTTCATTCCAACCCCACCACGCGCAGCTaGTCCTGCAGCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ESHARPTTFHHEHLFHSNPTTRS*SCSSCT Trigger: TGTGCAGGAGCTGCAGGAGCAGCTGCGCGTGGTGGG...GTTGGAATGAAATAGATGCTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATCTGGATTCAGAGTTCTCTAAGGAAATAGGGGCTCTGCCCGGTCCCATCCGACTCTGCATGTCCTaGAGCAGGTTCAGCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PYLDSEFSKEIGALPGPIRLCMS*SRFSAS Trigger: CGAGGCGCTGAACCTGCTGCAGGACATGCAGAGTCG...GATGGGACCGGGCAGAGCCCCTATTTCCTTAGAGAACTCTGAATCCAGATAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATCTGGATTCAGAGTTCTCTAAGGAAATAGGGGCTCTGCCCGGTCCCATCCTGCGGTGCAGCTCCTaGACGTGGTGCCCAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYLDSEFSKEIGALPGPILRCSS*TWCPIP Trigger: TGGAATTGGGCACCACGTGCAGGAGCTGCACCGCAG...GATGGGACCGGGCAGAGCCCCTATTTCCTTAGAGAACTCTGAATCCAGATAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | CCACTGGCAGGGACGTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTTCATGCCGAAAAGCCTaGAGTCTCTGGCGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLAGTYTLHHMFSASCSPSCRKA*SLWRTS Trigger: GGAGGTCCGCCAGAGACTGCAGGCTTTTCGGCATGA...AGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCCTGCCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTCCCCACCCAACCCCATCAAATGTGACAGCCATTGTCTAGCCAGGAGTTCCAACTGTTTTGGCTaGAGTAGTCCCAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSPPNPIKCDSHCLARSSNCFG*SSPRGS Trigger: AGAGCCTCTGGGACTACTTCAGCCAAAACAGTTGGA...ACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR TCA 90 bp | CCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCGGTGGAAGAGCTCTTTaGCTCGGTCGGTATGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHYTLHHMFSASCSPPAPGGRAL*LGRYGA Trigger: TGCACCATACCGACCGAGTCAAAGAGCTCTTCCACC...GGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCTCGGAGAGAGCCTaGGGGTCCAGGGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPLHTPSHVLCIMLSSCSSERA*GSRESP Trigger: TGGAGATTCCCTGGACCCTCAGGCTCTCTCCGAGGA...GCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | AGAGTCACGCCAGACCAACAACGTTCCATCACGAGCATCTATTTCATTCCAACCTGCTCCTGCAGCTCCTaGACACTCAGGCCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVTPDQQRSITSIYFIPTCSCSS*TLRPTC Trigger: GCAGGTGGGCCTGAGTGTGCAGGAGCTGCAGGAGCA...GGTTGGAATGAAATAGATGCTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGGCAGGGACGTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTTGCAGCACTCGACTCTaGATGTCCTGCAGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLAGTYTLHHMFSASCSPCSTRL*MSCSRF Trigger: GAACCTGCTGCAGGACATGCAGAGTCGAGTGCTGCA...AGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTACGTCCCTGCCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCCTCCTTCATCGTGTGGATGGCTCAGTTCCTTATCTGGATTCAGAGTTCGTGAGGAGCGACACTaGGGTGCAGCTCCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPPSSCGWLSSLSGFRVREERH*GAAPAR Trigger: ACGTGCAGGAGCTGCACCGCAGTGTCGCTCCTCACG...AACTCTGAATCCAGATAAGGAACTGAGCCATCCACACGATGAAGGAGGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAAGCCAGCTTCTGTGGCTaGCCCATCACGCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WWVCSETEGKQLLSDMVQASFCG*PITPLL Trigger: GAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGC...TTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | GTTTCCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCCCAGCTCCTGCTaGAGCTGTTTCCGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPLHTPSHVLCIMLSSCSPSSC*SCFRMP Trigger: AGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGA...GCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCACATGTTCACGCGCAGCTGCTCCTaGAGCTCCTGCACACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRDFRESMFPHYTLHHMFTRSCS*SSCTLR Trigger: CCTGAGTGTGCAGGAGCTGCAGGAGCAGCTGCGCGT...GAACATGTGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | TCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTTGTGGGACAGAGTCTaGACGCAGCGACTGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SITCSLHHALLLLPSNKSLWDRV*TQRLSR Trigger: GCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAA...GCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR GCA 90 bp | CCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTTCATGCCGAAAAGCCTaGAGTCTCTGGCGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSHVLCIMLSSCSLPTKASCRKA*SLWRTS Trigger: GGAGGTCCGCCAGAGACTGCAGGCTTTTCGGCATGA...AGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GGGATCCTTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCATCGTCCAGTCGGCTCTaGAGTCTGCTCAGGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GILQGFQGEHVSPLHTPSSSSRL*SLLRAL Trigger: TAAGGCCCTGAGCAGACTGCAGAGCCGACTGGACGA...TGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAAGGATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR CCA 90 bp | CCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTTGCAGCTCCTGCACGTaGTGCCCAATTCCAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSHVLCIMLSSCSLPTKACSSCT*CPIPVT Trigger: GGTGACTGGAATTGGGCACCACGTGCAGGAGCTGCA...AGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGTGTGTTCTGAGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATGGTCCAGGTTGCGTTaGATGCTGGTGTGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WWVCSETEGKQLLSDMVQWSRLR*MLVCRS Trigger: GGACCTGCACACCAGCATCCAACGCAACCTGGACCA...TTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCTCAGAACACACCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR TCA 90 bp | CCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCTCCTGGTCAATGGCCTaGGTAAATGCAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHYTLHHMFSASCSPPAPSWSMA*VNAAIC Trigger: GCAGATTGCTGCATTTACTCAGGCCATTGACCAGGA...GGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR TCA 90 bp | AGACAGAGGGGAAACAATTGCTCTCAGACATGGTCCAATGAGAGTCACGCCAGAGGCCTTATTACTGTCTaGGTGTCCCAGCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRGNNCSQTWSNESHARGLITV*VSQLRS Trigger: GCTCCTGAGCTGGGACACTCAGACAGTAATAAGGCC...TCTGGCGTGACTCTCATTGGACCATGTCTGAGAGCAATTGTTTCCCCTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GGGATCCTTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCATTTCAGGTTCTCCTGTaGCAGCTTCTGTGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GILQGFQGEHVSPLHTPSFQVLL*QLLWLA Trigger: GGCCAGCCACAGAAGCTGGCACAGGAGAACCTGAAA...TGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAAGGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGCCCCTGAGTGCAGCTGGTCCAGGTTaGGTTGGATGCTGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NEYQKLGLQSLLSVMPLSAAGPG*VGCWCA Trigger: TGCACACCAGCATCCAACGCAACCTGGACCAGCTGC...ACTCAGGGGCATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCCTCCTTCATCGTGTGGATGGCTCAGTTCCTTATCTGGATTCAGAGTTCTGTGCCAGCTTCTGTaGCTGGCCCATCACGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSPPSSCGWLSSLSGFRVLCQLL*LAHHAF Trigger: AAAGGCGTGATGGGCCAGCCACAGAAGCTGGCACAG...AACTCTGAATCCAGATAAGGAACTGAGCCATCCACACGATGAAGGAGGGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGCCAGAGGCTCTTCCGTaGCTGAGTGCTTGCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLPNEYQKLGLQSLLSVMPEALP*LSACEH Trigger: GTGTTCGCAAGCACTCAGGCACGGAAGAGCCTCTGG...CATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCCCACTCCTGTCACCTCACTCTTGCTACTTAGGATTGCCAAATGAGTACTTTCAGGTTCTCCTGTaGCAGCTTCTGTGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLPLLSPHSCYLGLPNEYFQVLL*QLLWLA Trigger: GGCCAGCCACAGAAGCTGGCACAGGAGAACCTGAAA...GTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTCACGCCAGACCAACAACGTTCCATCACGAGCATCTATTTCATTCCAACACTTCCCCCAGCTCCTaGTGCAGCTGTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ESHARPTTFHHEHLFHSNTSPSS*CSCFRM Trigger: CATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAAGT...GTTGGAATGAAATAGATGCTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | GGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGTTGTGGGACAGAGTCTaGACGCAGCGACTGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLPNEYQKLGLQSLLSVMLWDRV*TQRLSR Trigger: GCGACTCAGTCGCTGCGTGCAGACTCTGTCCCACAA...CATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGATTTCAGGGAGAGCATGTTTCCCCATTACACACTCCATCACATGTTCTGGTCCAGGTTGCGTTaGATGCTGGTGTGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRDFRESMFPHYTLHHMFWSRLR*MLVCRS Trigger: GGACCTGCACACCAGCATCCAACGCAACCTGGACCA...GAACATGTGATGGAGTGTGTAATGGGGAAACATGCTCTCCCTGAAATCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCACGCCAGACCAACAACGTTCCATCACGAGCATCTATTTCATTCCAACCCCTTCGCCTTACGTGTaGGTTTGTGGGACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVTPDQQRSITSIYFIPTPSPYV*VCGTES Trigger: AGACTCTGTCCCACAAACTCACACGTAAGGCGAAGG...GGTTGGAATGAAATAGATGCTCGTGATGGAACGTTGTTGGTCTGGCGTGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATTGCTCCTGCAGCTCCTaGACACTCAGGCCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRESFYQSQEESQAGMRNCSCSS*TLRPTC Trigger: GCAGGTGGGCCTGAGTGTGCAGGAGCTGCAGGAGCA...ATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATACGCGCAGCTGCTCCTaGAGCTCCTGCACACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRESFYQSQEESQAGMRNTRSCS*SSCTLR Trigger: CCTGAGTGTGCAGGAGCTGCAGGAGCAGCTGCGCGT...ATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCATGACAACCCTGGGGAGACAGGAGTTCCTCTCCATGGACCAACTGAATGGCCTGAGTAAATaGAGCAATCTGCAGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KALMTTLGRQEFLSMDQLNGLSK*SNLQVG Trigger: ACCTACCTGCAGATTGCTGCATTTACTCAGGCCATT...CAGTTGGTCCATGGAGAGGAACTCCTGTCTCCCCAGGGTTGTCATGAGAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| 3UTR CAA 72 bp | CTCCCACTCCTGTCACCTCACTCTTGCTACTTAGGATaGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSPHSCYLG*PNEYQKLGLQS Trigger: GCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCCTAAGTAGCAAGAGTGAGGTGACAGGAGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGTGCAGCTCCTGCACGTaGTGCCCAATTCCAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RESFYQSQEESQAGMRNLCSSCT*CPIPVT Trigger: GGTGACTGGAATTGGGCACCACGTGCAGGAGCTGCA...CAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGGAAAAAGCCTGCAGTCTCTaGCGGACCTCCTCGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESFYQSQEESQAGMRNLEKACSL*RTSSER Trigger: TCTCTCCGAGGAGGTCCGCCAGAGACTGCAGGCTTT...TTCCAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | GGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGTCCTGGTCAATGGCCTaGGTAAATGCAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLPNEYQKLGLQSLLSVMSWSMA*VNAAIC Trigger: GCAGATTGCTGCATTTACTCAGGCCATTGACCAGGA...CATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATCTGGAAGGCCTTATTACTGTCTaGGTGTCCCAGCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESFYQSQEESQAGMRNLEGLITV*VSQLRS Trigger: GCTCCTGAGCTGGGACACTCAGACAGTAATAAGGCC...TTCCAGATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATGCAGCTGGTCCAGGTTaGGTTGGATGCTGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRESFYQSQEESQAGMRNAAGPG*VGCWCA Trigger: TGCACACCAGCATCCAACGCAACCTGGACCAGCTGC...ATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGAGAGTTTTTATCAATCCCAAGAAGAGAGTCAAGCAGGCATGAGGAATAAAGCCTGCAGTCTCTaGCGGACCTCCTCGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRESFYQSQEESQAGMRNKACSL*RTSSER Trigger: TCTCTCCGAGGAGGTCCGCCAGAGACTGCAGGCTTT...ATTCCTCATGCCTGCTTGACTCTCTTCTTGGGATTGATAAAAACTCTCTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCCTCCTTCATCGTGTGGATGGCTCAGTTCCTTATCTGGATTCAGAGTTAATGGCCTGAGTAAATaGAGCAATCTGCAGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPPSSCGWLSSLSGFRVNGLSK*SNLQVG Trigger: ACCTACCTGCAGATTGCTGCATTTACTCAGGCCATT...AACTCTGAATCCAGATAAGGAACTGAGCCATCCACACGATGAAGGAGGGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS GCA 90 bp | GGCGCGAGCTCACTTCCCCCAGCTCCTGCTGCAGCTGTTTCCGAATaGCTTCTGGGTCCTGGGCCAGCAGAGGAGGCTCCTTCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GASSLPPAPAAAVSE*LLGPGPAEEAPSQA Trigger: GGCCTGGGAAGGAGCCTCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAAGTGAGCTCGCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 |
||
| CDS GCA 90 bp | CCACGCGCAGCTGTTCCCCCAGCTCCTGCTGCAGCTGTTTCCGAATaGCTTCTGGGTCCTGGGCCAGCAGAGGAGGCTCCTTCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRAAVPPAPAAAVSE*LLGPGPAEEAPSQA Trigger: GGCCTGGGAAGGAGCCTCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAACAGCTGCGCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214202.2 |
||
| CDS CCA 90 bp | TCCCCCAGCTCCTGCTGCAGCTGTTTCCGAATGCCTTCTGGGTCCTaGGCCAGCAGAGGAGGCTCCTTCCCAGGCCCTCTCAAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSCCSCFRMPSGS*ASRGGSFPGPLKGP Trigger: GGGACCCTTGAGAGGGCCTGGGAAGGAGCCTCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
||
| CDS GCA 90 bp | GTATGGTGCAGCATTCCCCCAGCTCCTGCTGCAGCTGTTTCCGAATaGCTTCTGGGTCCTGGGCCAGCAGAGGAGGCTCCTTCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWCSIPPAPAAAVSE*LLGPGPAEEAPSQA Trigger: GGCCTGGGAAGGAGCCTCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAATGCTGCACCATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215458.2 |
||
| CDS GCA 90 bp | GCCTTGGTGTCTTCTCCCACCACGCGCAGCTGTTCCCCCAGCTCCTaGTGCAGCTGTTTCCGAATGCCTTCTGGGTCCTGGGCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALVSSPTTRSCSPSS*CSCFRMPSGSWASR Trigger: TCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAACAGCTGCGCGTGGTGGGAGAAGACACCAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214202.2 |
||
| CDS GCA 90 bp | CTCTTTGACTCGGTCGGTATGGTGCAGCATTCCCCCAGCTCCTGCTaGAGCTGTTTCCGAATGCCTTCTGGGTCCTGGGCCAGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFDSVGMVQHSPSSC*SCFRMPSGSWASRG Trigger: TCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAATGCTGCACCATACCGACCGAGTCAAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215458.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCACTGGCTTGCGGTCAGTCACCCCACACACCATCTCCCACTCCTGTCACCGCCTTACGTGTGAGTTaGTGGGACAGAGTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QALACGQSPHTPSPTPVTALRVS*WDRVCT Trigger: CGTGCAGACTCTGTCCCACAAACTCACACGTAAGGC...GGTGACAGGAGTGGGAGATGGTGTGTGGGGTGACTGACCGCAAGCCAGTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCCCACCCAACCCCATCAAATGTGACAGCCATTGTCTAGCCAGGAGTCTGGTCCAGGTTGCGTaGGATGCTGGTGTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSPPNPIKCDSHCLARSLVQVA*DAGVQV Trigger: GACCTGCACACCAGCATCCAACGCAACCTGGACCAG...ACTCCTGGCTAGACAATGGCTGTCACATTTGATGGGGTTGGGTGGGGAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | CCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCTCCCCGCAGCTGGTCCAGGTaGCGTTGGATGCTGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PHYTLHHMFSASCSPPAPRSWSR*RWMLVC Trigger: GCACACCAGCATCCAACGCAACCTGGACCAGCTGCG...GGGAGCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | CCCATCTGTGCTGACGCGGATGAAGGCACTGAGCTCATCGCGCAGCTGGTCCAGTTTGCTCCAACTGTTTaGGCTGAAGTAGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PICADADEGTELIAQLVQFAPTV*AEVVPE Trigger: CTCTGGGACTACTTCAGCCAAAACAGTTGGAGCAAA...CTGGACCAGCTGCGCGATGAGCTCAGTGCCTTCATCCGCGTCAGCACAGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213878.2 |
||
| CDS GCA 90 bp | CATAGGCAATATCTTCCCACAGGTCGTCCAGTCGGCTCTGCAGTCTaGTCAGGGCCTTATTACTGTCTGAGTGTCCCAGCTCAGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HRQYLPTGRPVGSAV*SGPYYCLSVPAQER Trigger: TCGCTCCTGAGCTGGGACACTCAGACAGTAATAAGGCCCTGAGCAGACTGCAGAGCCGACTGGACGACCTGTGGGAAGATATTGCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCCGCAGCTGGTCCAGGTaGCGTTGGATGCTGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPLHTPSHVLCIMLSSCRSWSR*RWMLVC Trigger: GCACACCAGCATCCAACGCAACCTGGACCAGCTGCG...GCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGCACTGGCTTGCGGTCAGTCACCCCACACACCATCTCCCACTCCTGTCACTTTGCTCCAACTGTTTaGGCTGAAGTAGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTGLRSVTPHTISHSCHFAPTV*AEVVPE Trigger: CTCTGGGACTACTTCAGCCAAAACAGTTGGAGCAAA...GTGACAGGAGTGGGAGATGGTGTGTGGGGTGACTGACCGCAAGCCAGTGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS GCA 90 bp | CATATTGTAGAGGTCTTGCTCGAAGCTGCCTTTCAGGTTCTCCTGTaGCAGCTTCTGTGGCTGGCCCATCACGCCTTTGCTCCAACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIVEVLLEAAFQVLL*QLLWLAHHAFAPTV Trigger: AACAGTTGGAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGCACAGGAGAACCTGAAAGGCAGCTTCGAGCAAGACCTCTACAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCCATTACACACTCCATCACATGTTCTCTGCATCATGCTCTCCTCCTGCGGGTGGAAGAGCTCTTaGACTCGGTCGGTATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPLHTPSHVLCIMLSSCGWKSS*TRSVWC Trigger: GCACCATACCGACCGAGTCAAAGAGCTCTTCCACCC...GCAGGAGGAGAGCATGATGCAGAGAACATGTGATGGAGTGTGTAATGGGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | TGCGTAAGGGTGGAAGAGCTCTTTGACTCGGTCGGTATGGTGCAGCACTCGACTTTTGCTCCAACTGTTTaGGCTGAAGTAGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CVRVEELFDSVGMVQHSTFAPTV*AEVVPE Trigger: CTCTGGGACTACTTCAGCCAAAACAGTTGGAGCAAA...AGTCGAGTGCTGCACCATACCGACCGAGTCAAAGAGCTCTTCCACCCTTACGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215187.2 |
||
| CDS-3UTR CAA 90 bp | CGTGTGGATGGCTCAGTTCCTTATCTGGATTCAGAGTTCTCTAAGGAAATAGGGCTGGTCCAGGTTGCGTaGGATGCTGGTGTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVDGSVPYLDSEFSKEIGLVQVA*DAGVQV Trigger: GACCTGCACACCAGCATCCAACGCAACCTGGACCAG...CCCTATTTCCTTAGAGAACTCTGAATCCAGATAAGGAACTGAGCCATCCACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | GGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGGCCTTACGTGTGAGTTaGTGGGACAGAGTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GLPNEYQKLGLQSLLSVMALRVS*WDRVCT Trigger: CGTGCAGACTCTGTCCCACAAACTCACACGTAAGGC...CATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS GCA 90 bp | GCTTTTCTAGGTAATTGTTCATATTGTAGAGGTCTTGCTCGAAGCTaGCTTTCAGGTTCTCCTGTGCCAGCTTCTGTGGCTGGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AFLGNCSYCRGLARS*LSGSPVPASVAGPS Trigger: TGATGGGCCAGCCACAGAAGCTGGCACAGGAGAACCTGAAAGGCAGCTTCGAGCAAGACCTCTACAATATGAACAATTACCTAGAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
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| CDS-3UTR CAA 90 bp | TGTTCTCTGCATCATGCTCTCCTCCTGCTCCCTTCCAACAAAAGCTCTCATGACTTTGCTCCAACTGTTTaGGCTGAAGTAGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLHHALLLLPSNKSSHDFAPTV*AEVVPE Trigger: CTCTGGGACTACTTCAGCCAAAACAGTTGGAGCAAA...GTCATGAGAGCTTTTGTTGGAAGGGAGCAGGAGGAGAGCATGATGCAGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTGGATGGCTCAGTTCCTTATCTGGATTCAGAGTTCTCTAAGGAAATAGGGACTATGACCCTGGTCTaGAAGGCCATAGGCAATATC | + |
|
Preference number: 5 (lower is better) Translates to: RVDGSVPYLDSEFSKEIGTMTLV*KAIGNI Trigger: GATATTGCCTATGGCCTTCAAGACCAGGGTCATAGT...CCCTATTTCCTTAGAGAACTCTGAATCCAGATAAGGAACTGAGCCATCCACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS-3UTR CAA 90 bp | GGATTGCCAAATGAGTACCAGAAGCTGGGTTTGCAAAGCCTACTGAGTGTAATGACTATGACCCTGGTCTaGAAGGCCATAGGCAATATC | + |
|
Preference number: 5 (lower is better) Translates to: GLPNEYQKLGLQSLLSVMTMTLV*KAIGNI Trigger: GATATTGCCTATGGCCTTCAAGACCAGGGTCATAGT...CATTACACTCAGTAGGCTTTGCAAACCCAGCTTCTGGTACTCATTTGGCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS GCA 72 bp | GGCTCCAGGCGCGAGCTCACTTCCCCCAGCTCCTGCTaGAGCTGTTTCCGAATGCCTTCTGGGTCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRRELTSPSSC*SCFRMPSGSWA Trigger: GGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAAGTGAGCTCGCGCCTGGAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 |
||
| CDS GCA 72 bp | CCAGAGGCTCTTCCGTGCCTGAGTGCTTGCGAACACTaGGAGGAGGGCGAGGGCCCAAGTGATGACTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PEALPCLSACEH*EEGEGPSDDCS Trigger: GCTGCAGTCATCACTTGGGCCCTCGCCCTCCTCGCAGTGTTCGCAAGCACTCAGGCACGGAAGAGCCTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215187.2 ENSMUST00000215458.2 |
||
| CDS CCA 72 bp | TCCTGCTGCAGCTGTTTCCGAATGCCTTCTGGGTCCTaGGCCAGCAGAGGAGGCTCCTTCCCAGGCCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCCSCFRMPSGS*ASRGGSFPGPL Trigger: GAGAGGGCCTGGGAAGGAGCCTCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
||
| CDS GCA 72 bp | TCACTTCCCCCAGCTCCTGCTGCAGCTGTTTCCGAATaGCTTCTGGGTCCTGGGCCAGCAGAGGAGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLPPAPAAAVSE*LLGPGPAEEAP Trigger: AGGAGCCTCCTCTGCTGGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAAGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 |
||
| CDS GCA 72 bp | TCGGTCGGTATGGTGCAGCATTCCCCCAGCTCCTGCTaGAGCTGTTTCCGAATGCCTTCTGGGTCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVGMVQHSPSSC*SCFRMPSGSWA Trigger: GGCCCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAATGCTGCACCATACCGACCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215458.2 |
||
| CDS GCA 72 bp | GACTCGGTCGGTATGGTGCAGCATTCCCCCAGCTCCTaGTGCAGCTGTTTCCGAATGCCTTCTGGGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSVGMVQHSPSS*CSCFRMPSGSW Trigger: CCAGGACCCAGAAGGCATTCGGAAACAGCTGCAGCAGGAGCTGGGGGAATGCTGCACCATACCGACCGAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215458.2 |
||
| CDS CAA 72 bp | CTGTGGCTGGCCCATCACGCCTTTGCTCCAACTGTTTaGGCTGAAGTAGTCCCAGAGGCTCTTCCGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LWLAHHAFAPTV*AEVVPEALPCL Trigger: CAGGCACGGAAGAGCCTCTGGGACTACTTCAGCCAAAACAGTTGGAGCAAAGGCGTGATGGGCCAGCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215187.2 ENSMUST00000215458.2 |
||
| CDS CCA 72 bp | CTGCCTTTCAGGTTCTCCTGTGCCAGCTTCTGTGGCTaGCCCATCACGCCTTTGCTCCAACTGTTTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPFRFSCASFCG*PITPLLQLFWL Trigger: CAGCCAAAACAGTTGGAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGCACAGGAGAACCTGAAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
||
| CDS GCA 72 bp | TATCTTCCCACAGGTCGTCCAGTCGGCTCTGCAGTCTaGTCAGGGCCTTATTACTGTCTGAGTGTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: YLPTGRPVGSAV*SGPYYCLSVPA Trigger: AGCTGGGACACTCAGACAGTAATAAGGCCCTGAGCAGACTGCAGAGCCGACTGGACGACCTGTGGGAAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 |
||
| CDS CCA 72 bp | GAAGCTGCCTTTCAGGTTCTCCTGTGCCAGCTTCTGTaGCTGGCCCATCACGCCTTTGCTCCAACTGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EAAFQVLLCQLL*LAHHAFAPTVL Trigger: CAAAACAGTTGGAGCAAAGGCGTGATGGGCCAGCCACAGAAGCTGGCACAGGAGAACCTGAAAGGCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
||
| CDS GCA 72 bp | GGTAATTGTTCATATTGTAGAGGTCTTGCTCGAAGCTaGCTTTCAGGTTCTCCTGTGCCAGCTTCTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GNCSYCRGLARS*LSGSPVPASVA Trigger: AGCCACAGAAGCTGGCACAGGAGAACCTGAAAGGCAGCTTCGAGCAAGACCTCTACAATATGAACAATTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034584.4 ENSMUST00000121598.8 ENSMUST00000213878.2 ENSMUST00000214202.2 ENSMUST00000215458.2 |
||