Pregenerated sensors for APLP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006651Ensembl transcript IDs: ENSMUST00000006828.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGGGTGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTaGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAG | + |
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Preference number: 1 (lower is better) Translates to: AGWERGLYWDVSEET*DGEFQGVTYIPGTQ Trigger: CTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCACCCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| 3UTR TCA 90 bp | ATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAAGAATaGATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: ISKGVEFGTRKGKQE*ICQDLPPPPEAGSW Trigger: CCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCGCTGGGAGTTGGGTTTaGGGGGCCGGAAGAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TWDGEFQGVTYIPGTQVTAGSWV*GAGRRA Trigger: TGCCCTTCTTCCGGCCCCCCAAACCCAACTCCCAGC...GGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCGGATTTCTAAGGGTGTaGAATTTGGAACTAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TWDGEFQGVTYIPGTQVTGFLRV*NLELGR Trigger: CCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCC...GGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| 3UTR CAA 90 bp | GGTCCTTTGTGGGACAGGAGCTGGGGATTTCTAAGGGTGTGGAATTaGGAACTAGGAAGGGGAAACAAGAATGAATTTGTCAAGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: GPLWDRSWGFLRVWN*ELGRGNKNEFVKIS Trigger: GGAGATCTTGACAAATTCATTCTTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTCCTGTCCCACAAAGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| 3UTR-3UTR TCA 90 bp | TATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCAGGGAGTGACATACAAGGGGAAACAAGAATaGATTTGTCAAGATCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: YWDVSEETWDGEFQGVTYKGKQE*ICQDLP Trigger: AGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTT...GTATGTCACTCCCTGGAATTCACCATCCCACGTTTCTTCACTAACATCCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| 3UTR CCA 72 bp | CCTTTGTGGGACAGGAGCTGGGGATTTCTAAGGGTGTaGAATTTGGAACTAGGAAGGGGAAACAAGAATGAA | + |
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Preference number: 3 (lower is better) Translates to: PLWDRSWGFLRV*NLELGRGNKNE Trigger: TTCATTCTTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTCCTGTCCCACAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | ACGTGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCGTTCCCAGCGGCCGGTaGGCAGGTCCCGGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TWDGEFQGVTYIPGTQVTVPSGR*AGPGEG Trigger: CCCTTCACCGGGACCTGCGCACCGGCCGCTGGGAAC...GGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GAAGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGCACCTCCCTCTGCTCTaGCCCCCAGGGGCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: EGETRMNLSRSPSPTGSWHLPLL*PPGART Trigger: GGTCCTGGCCCCTGGGGGGCAGAGCAGAGGGAGGTG...CCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GAAGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGCATCGGGATGGCCTGTaGAGCCTGCTCCACGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: EGETRMNLSRSPSPTGSWHRDGL*SLLHAC Trigger: GCACGCGTGGAGCAGGCTGCACAGGCCATCCCGATG...CCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGCATAGTCCAGCCACTTaGGCCGACCCCGGAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: ETRMNLSRSPSPTGSWELHSPAT*ADPGAS Trigger: CGAGGCTCCGGGGTCGGCTCAAGTGGCTGGACTATG...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | ATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTGGGGCATGATCAGCAGACCTaGCAAGGCCTCTCGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: MNLSRSPSPTGSWELGLGHDQQT*QGLSGH Trigger: GTGTCCCGAGAGGCCTTGTCAGGTCTGCTGATCATG...CCCCAAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGAAGGGCACAACCTCATaGTGGGGGTGGGCGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: GETRMNLSRSPSPTGSWEKGTTS*WGWAHL Trigger: CAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTT...CTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTACAGGGGTGTGGGAGCTaGGAGGTGGGGCCCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WDGEFQGVTYIPGTQVTLQGCGS*EVGPFL Trigger: AAGAAAGGGCCCCACCTCCCAGCTCCCACACCCCTG...TAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | GCCGGGTGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTAGGTGGGTCTGGACCTaGAAGCGCATCTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AGWERGLYWDVSEETWDGRWVWT*KRICWA Trigger: GGCCCAGCAGATGCGCTTTCAGGTCCAGACCCACCT...ACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCACCCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTATGCTCATTCAGGGCCTaGCTGTCCGCCTTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WDGEFQGVTYIPGTQVTLCSFRA*LSAFGR Trigger: CCTGCCAAAGGCGGACAGGCAGGCCCTGAATGAGCA...TAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTACTTTGTCCTCACTGCTaGTCCCGGGCACAGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: WDGEFQGVTYIPGTQVTLLCPHC*SRAQRR Trigger: ACGCCTCTGTGCCCGGGAGCAGCAGTGAGGACAAAG...TAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | AAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTAGCGCTCCATCGGGATaGCCTGTGCAGCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KNEFVKISLPHRKLGVGFSAPSG*PVQPAP Trigger: TGGAGCAGGCTGCACAGGCCATCCCGATGGAGCGCT...AAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | AATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTGGGTCGCCAGGCAGGCAATaGAAGGGCACAACCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: NEFVKISLPHRKLGVGFGSPGRQ*KGTTSW Trigger: CCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGA...CCCAAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAAACCATGACAGGGGTGTaGGAGCTGGGAGGTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QELGISKGVEFGTRKGKQTMTGV*ELGGGA Trigger: GGCCCCACCTCCCAGCTCCCACACCCCTGTCATGGT...TTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GAAGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGATGACTCTGGTGGCGTaGGTCTCCACCAGGCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: EGETRMNLSRSPSPTGSWMTLVA*VSTRRC Trigger: GCAACGCCTGGTGGAGACCCACGCCACCAGAGTCAT...CCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | AGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAAAGCTCCTGGATCTGTaGCCGCAGCTCCTGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RGNKNEFVKISLPHRKLGKLLDL*PQLLSQ Trigger: CTGGCTCAGGAGCTGCGGCCACAGATCCAGGAGCTT...TCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGCCAGGAAGCGGTAGGTaGGGTTCTCATAGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: GETRMNLSRSPSPTGSWEPGSGR*GSHSHA Trigger: GGCATGGCTATGAGAACCCCACCTACCGCTTCCTGG...CTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGCGCAGAAGCAGCAATaGCAGTGGCAGCAACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: ETRMNLSRSPSPTGSWELAQKQQ*QWQQQR Trigger: CCGCTGTTGCTGCCACTGTCATTGCTGCTTCTGCGC...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | TGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTACAGAAGACAGCGTCGTaGTCGCTGTGGGTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: WDGEFQGVTYIPGTQVTLQKTAS*SLWVWF Trigger: GAACCAGACCCACAGCGATCACGACGCTGTCTTCTG...TAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGAGCCTGCTCCACGCGTaGTATGTGCAGCTCGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ETRMNLSRSPSPTGSWELSLLHA*YVQLGV Trigger: TACCCCGAGCTGCACATAGCACGCGTGGAGCAGGCT...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCGGGGGTGGGCGCATCTaGCACTCCGGGTACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: WERGLYWDVSEETWDGEFGGGRI*HSGYPH Trigger: GTGGGGGTACCCGGAGTGGCAGATGCGCCCACCCCC...GAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGAGTTCCCGGAGCTGCTaGTCCTCCAGGGTCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: ETRMNLSRSPSPTGSWELSSRSC*SSRVSM Trigger: CATGCTGACCCTGGAGGAGCAGCAGCTCCGGGAACT...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTGGATATCTGACGAGTaGAAGGGAAACCCCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GETRMNLSRSPSPTGSWEWISDE*KGNPLG Trigger: CCCGAGGGGGTTTCCCTTCCACTCGTCAGATATCCA...CTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAACCTCCAGGGTCAGCATaGGGTCCACCTCCACCACTC | + |
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Preference number: 4 (lower is better) Translates to: QELGISKGVEFGTRKGKQPPGSA*GPPPPL Trigger: GAGTGGTGGAGGTGGACCCCATGCTGACCCTGGAGG...TTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | AGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGATCCACGCGTGCTATGTaGAGCTCGGGGTACATCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGNKNEFVKISLPHRKLGSTRAM*SSGYIC Trigger: ACAGATGTACCCCGAGCTGCACATAGCACGCGTGGA...TCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTATGGTCCATACGCTCCTaGTGCAAGAACCGACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: WDGEFQGVTYIPGTQVTLWSIRS*CKNRQP Trigger: AGGCTGTCGGTTCTTGCACCAGGAGCGTATGGACCA...TAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGCCATCCCAGATGGGTTaGGAGTTGCAGGAGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: ETRMNLSRSPSPTGSWELPSQMG*ELQEVD Trigger: GTCCACCTCCTGCAACTCCCAACCCATCTGGGATGG...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAAGAAGTGGGAGCTGGGAGGTaGGGCCCTTTCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ELGISKGVEFGTRKGKQEVGAGR*GPFFLL Trigger: GAGGAGGAAGAAAGGGCCCCACCTCCCAGCTCCCAC...TTCTTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | TATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCAGGGAGTGACATACGTGCGCAGGTCCCGGTaGAGGGTTAGACGCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: YWDVSEETWDGEFQGVTYVRRSR*RVRRPH Trigger: ATGTGGGCGTCTAACCCTTCACCGGGACCTGCGCAC...GTATGTCACTCCCTGGAATTCACCATCCCACGTTTCTTCACTAACATCCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | GAAGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGCTGATGCCTCCTGGTTaGACTCTCACACTGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: EGETRMNLSRSPSPTGSWLMPPG*TLTLVH Trigger: ATGGACCAGTGTGAGAGTTCAACCAGGAGGCATCAG...CCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTGTTCTTCCAGGGTCTaGAGAATGGACTGGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GETRMNLSRSPSPTGSWECSSRV*RMDWKC Trigger: GCACTTCCAGTCCATTCTGCAGACCCTGGAAGAACA...CTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | CAGGAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAACTTCTCAGGATCCACTaGGGCCACGTGCTGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: QELGISKGVEFGTRKGKQLLRIH*GHVLVV Trigger: CACTACCAGCACGTGGCCGCAGTGGATCCTGAGAAG...TTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | AGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTCTGCAGAATGGACTaGAAGTGCTCATTCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGNKNEFVKISLPHRKLGVCRMD*KCSFRA Trigger: GGCCCTGAATGAGCACTTCCAGTCCATTCTGCAGAC...TCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR TCA 90 bp | AGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGAGGAGGATGACTCTTaGTCTGTGGACCCTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGNKNEFVKISLPHRKLGEEDDS*SVDPFG Trigger: TCCAAAAGGGTCCACAGATCAAGAGTCATCCTCCTC...TCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGCGATTTCCCCAGGCATaGCAAAGTAAACATCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GETRMNLSRSPSPTGSWERFPQA*QSKHPH Trigger: GTGTGGATGTTTACTTTGGCATGCCTGGGGAAATCG...CTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | AAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTAGAATGGACTGGAAGTaGTCATTCAGGGCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KNEFVKISLPHRKLGVGFRMDWK*SFRACL Trigger: CAGGCAGGCCCTGAATGAGCACTTCCAGTCCATTCT...AAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | ACGTGGGATGGTGAATTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCGATGCATTCACCTTTTaGTCATACTGCTCCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TWDGEFQGVTYIPGTQVTDAFTF*SYCSSG Trigger: TCCACTGGAGCAGTATGAGCAAAAGGTGAATGCATC...GGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAATTCACCATCCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCGGCACAACCTCATGGTaGGGGTGGGCGCATCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WERGLYWDVSEETWDGEFGTTSW*GWAHLP Trigger: TGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCC...GAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | AAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTATTGGCTGTCAGCCATaGCCCATTCACGCATCACCT | + |
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Preference number: 4 (lower is better) Translates to: KNEFVKISLPHRKLGVGFIGCQP*PIHASP Trigger: AGGTGATGCGTGAATGGGCCATGGCTGACAGCCAAT...AAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGCAGGTTCTTAGATTaGCTGTCAGCCATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ETRMNLSRSPSPTGSWELGRFLD*LSAMAH Trigger: ATGGGCCATGGCTGACAGCCAATCTAAGAACCTGCC...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GAAGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGCCAGGGTCTGCAGAATaGACTGGAAGTGCTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: EGETRMNLSRSPSPTGSWPGSAE*TGSAHS Trigger: TGAATGAGCACTTCCAGTCCATTCTGCAGACCCTGG...CCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCTACTCCAGCACGCGCTaGGGGTCCAGAAGACAGCGT | + |
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Preference number: 4 (lower is better) Translates to: WERGLYWDVSEETWDGEFYSSTR*GSRRQR Trigger: ACGCTGTCTTCTGGACCCGCAGCGCGTGCTGGAGTA...GAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTAAGGAGCAATAAAAGATGGGTTGGGAGTTaGAGGAGGTGGACAGCATAC | + |
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Preference number: 4 (lower is better) Translates to: FQGVTYIPGTQVTLRSNKRWVGS*RRWTAY Trigger: GTATGCTGTCCACCTCCTGCAACTCCCAACCCATCT...TTTATTGCTCCTTAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTAAGGAGCAATAAAGGGAGTTGCAGGAGGTaGACAGCATACATACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FQGVTYIPGTQVTLRSNKGSCRR*TAYILH Trigger: GTGGAGTATGTATGCTGTCCACCTCCTGCAACTCCC...TTTATTGCTCCTTAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCGGGGTACATCTGTCTaGAGTACTCCAGCACGCGCT | + |
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Preference number: 4 (lower is better) Translates to: WERGLYWDVSEETWDGEFRGTSV*STPARA Trigger: AGCGCGTGCTGGAGTACTGCAGACAGATGTACCCCG...GAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCTCAGGAAACCCTCATaGTCGCCGATTTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: WERGLYWDVSEETWDGEFLRKPS*SPISPG Trigger: GCCTGGGGAAATCGGCGAGCATGAGGGTTTCCTGAG...GAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | TATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCAGGGAGTGACATACGTCTCCACCAGGCGTTaGCGTTCACCAGACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: YWDVSEETWDGEFQGVTYVSTRR*RSPDTC Trigger: ACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGAC...GTATGTCACTCCCTGGAATTCACCATCCCACGTTTCTTCACTAACATCCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAAGAACCTCCTGATGCCTCCTaGTTGAACTCTCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ELGISKGVEFGTRKGKQEPPDAS*LNSHTG Trigger: ACCAGTGTGAGAGTTCAACCAGGAGGCATCAGGAGG...TTCTTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCAGGGAGTGACATACCCTCCAGGTCCATCTTaGCCCTCAGGAAACCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YWDVSEETWDGEFQGVTYPPGPS*PSGNPH Trigger: ATGAGGGTTTCCTGAGGGCCAAGATGGACCTGGAGG...GTATGTCACTCCCTGGAATTCACCATCCCACGTTTCTTCACTAACATCCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTAAGGAGCAATAAAATCACCTCATTAATCTaGCGCATCCTACGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FQGVTYIPGTQVTLRSNKITSLI*RILRSS Trigger: GGAGGAGCGTAGGATGCGCCAGATTAATGAGGTGAT...TTTATTGCTCCTTAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | GCCGGGTGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAAGTAATCGTCTACTaGCTGAGGGAAAGATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGWERGLYWDVSEETWDGEVIVY*LRERFH Trigger: GTGGAATCTTTCCCTCAGCCAGTAGACGATTACTTC...ACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCACCCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCCAGGGAGTGACATACAGGCGTCCAGTTCACTaGGACCCAAGTGTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YWDVSEETWDGEFQGVTYRRPVH*DPSVQQ Trigger: TTGCTGAACACTTGGGTCCCAGTGAACTGGACGCCT...GTATGTCACTCCCTGGAATTCACCATCCCACGTTTCTTCACTAACATCCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | CAGGAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAACATAGGGTTTCTTCTTaGGCAGAAGCAGCAAGGATA | + |
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Preference number: 4 (lower is better) Translates to: QELGISKGVEFGTRKGKQHRVSS*AEAARI Trigger: TATCCTTGCTGCTTCTGCGCAAGAAGAAACCCTATG...TTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTGAATTCGTTGAACTCTCACACTaGTCCATACGCTCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WERGLYWDVSEETWDGEFVELSH*SIRSWC Trigger: GCACCAGGAGCGTATGGACCAGTGTGAGAGTTCAAC...GAATTCACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR GCA 90 bp | GAGCTGGGGATTTCTAAGGGTGTGGAATTTGGAACTAGGAAGGGGAAACAAGAAACCTTTTGCTCATACTaGTCCAGTGGAGTTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ELGISKGVEFGTRKGKQETFCSY*SSGVSF Trigger: GAAGCTAACTCCACTGGAGCAGTATGAGCAAAAGGT...TTCTTGTTTCCCCTTCCTAGTTCCAAATTCCACACCCTTAGAAATCCCCAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS TCA 90 bp | TCTGCAGTACTCCAGCACGCGCTGCGGGTCCAGAAGACAGCGTCGTaGTCGCTGTGGGTCTGGTTCCCAGCGGCCGGTGCGCAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVLQHALRVQKTAS*SLWVWFPAAGAQVP Trigger: CGGGACCTGCGCACCGGCCGCTGGGAACCAGACCCACAGCGATCACGACGCTGTCTTCTGGACCCGCAGCGCGTGCTGGAGTACTGCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | CGGGTACCCCCACACCAGCGCTCCATCGGGATGGCCTGTGCAGCCTaGTCCACGCGTGCTATGTGCAGCTCGGGGTACATCTGTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RVPPHQRSIGMACAA*STRAMCSSGYICLQ Trigger: CTGCAGACAGATGTACCCCGAGCTGCACATAGCACGCGTGGAGCAGGCTGCACAGGCCATCCCGATGGAGCGCTGGTGTGGGGGTACCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | CTCACGAATTCGCCAGGCAGGCAATGGAAGGGCACAACCTCATGGTaGGGGTGGGCGCATCTGCCACTCCGGGTACCCCCACACCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTNSPGRQWKGTTSW*GWAHLPLRVPPHQR Trigger: GCGCTGGTGTGGGGGTACCCGGAGTGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGAATTCGTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | GAAGACAGCGTCGTGATCGCTGTGGGTCTGGTTCCCAGCGGCCGGTaGGCAGGTCCCGGTGAAGGGTTAGACGCCCACATAGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EDSVVIAVGLVPSGR*AGPGEGLDAHIVQP Trigger: TGGCTGGACTATGTGGGCGTCTAACCCTTCACCGGGACCTGCGCACCGGCCGCTGGGAACCAGACCCACAGCGATCACGACGCTGTCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | TCACTCACGAATTCGCCAGGCAGGCAATGGAAGGGCACAACCTCATaGTGGGGGTGGGCGCATCTGCCACTCCGGGTACCCCCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTNSPGRQWKGTTS*WGWAHLPLRVPPHQ Trigger: CTGGTGTGGGGGTACCCGGAGTGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGAATTCGTGAGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | TCGCCCTGTAAGGCTGCCAGGAAACCTTCCAGGGCTGCTCGGCGCTaGTCGTTGATCAGAGCGATGACTCTGGTGGCGTGGGTCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: SPCKAARKPSRAARR*SLIRAMTLVAWVST Trigger: GGTGGAGACCCACGCCACCAGAGTCATCGCTCTGATCAACGACCAGCGCCGAGCAGCCCTGGAAGGTTTCCTGGCAGCCTTACAGGGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | ACACCAGCGCTCCATCGGGATGGCCTGTGCAGCCTGCTCCACGCGTaGTATGTGCAGCTCGGGGTACATCTGTCTGCAGTACTCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TPALHRDGLCSLLHA*YVQLGVHLSAVLQH Trigger: GTGCTGGAGTACTGCAGACAGATGTACCCCGAGCTGCACATAGCACGCGTGGAGCAGGCTGCACAGGCCATCCCGATGGAGCGCTGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | TCGGGCACTAGCAGGGCTTCACTCACGAATTCGCCAGGCAGGCAATaGAAGGGCACAACCTCATGGTGGGGGTGGGCGCATCTGCCACTC | + |
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Preference number: 5 (lower is better) Translates to: SGTSRASLTNSPGRQ*KGTTSWWGWAHLPL Trigger: GAGTGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGAATTCGTGAGTGAAGCCCTGCTAGTGCCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | ATGTGCAGCTCGGGGTACATCTGTCTGCAGTACTCCAGCACGCGCTaGGGGTCCAGAAGACAGCGTCGTGATCGCTGTGGGTCTGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: MCSSGYICLQYSSTR*GSRRQRRDRCGSGS Trigger: GGAACCAGACCCACAGCGATCACGACGCTGTCTTCTGGACCCGCAGCGCGTGCTGGAGTACTGCAGACAGATGTACCCCGAGCTGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | CGTCCTTGGATTCGGGAGGCTGGAGGCTACCTTTGTCCTCACTGCTaGTCCCGGGCACAGAGGCGTCCAGTTCACTGGGACCCAAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: RPWIREAGGYLCPHC*SRAQRRPVHWDPSV Trigger: AACACTTGGGTCCCAGTGAACTGGACGCCTCTGTGCCCGGGAGCAGCAGTGAGGACAAAGGTAGCCTCCAGCCTCCCGAATCCAAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | GATCGTCCTTGGATTCGGGAGGCTGGAGGCTACCTTTGTCCTCACTaGTGCTCCCGGGCACAGAGGCGTCCAGTTCACTGGGACCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: DRPWIREAGGYLCPH*CSRAQRRPVHWDPS Trigger: ACTTGGGTCCCAGTGAACTGGACGCCTCTGTGCCCGGGAGCAGCAGTGAGGACAAAGGTAGCCTCCAGCCTCCCGAATCCAAGGACGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | GCTGCTCGGCGCTGGTCGTTGATCAGAGCGATGACTCTGGTGGCGTaGGTCTCCACCAGGCGTTGCCGTTCACCAGACACTTGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AARRWSLIRAMTLVA*VSTRRCRSPDTCSS Trigger: GGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGCTCTGATCAACGACCAGCGCCGAGCAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS TCA 90 bp | GCCCTGAGAGCTGCAGGCCTCCTGAGCCTCCTGATGCCTCCTGGTTaGACTCTCACACTGGTCCATACGCTCCTGGTGCAAGAACCGACA | + |
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Preference number: 5 (lower is better) Translates to: ALRAAGLLSLLMPPG*TLTLVHTLLVQEPT Trigger: TGTCGGTTCTTGCACCAGGAGCGTATGGACCAGTGTGAGAGTTCAACCAGGAGGCATCAGGAGGCTCAGGAGGCCTGCAGCTCTCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | CCGGGTAGAGGGGTCACCAGCTGCCATCCCAGATGGGTTGGGAGTTaGAGGAGGTGGACAGCATACATACTCCACACCTCGGAACCGATC | + |
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Preference number: 5 (lower is better) Translates to: PGRGVTSCHPRWVGS*RRWTAYILHTSEPI Trigger: GATCGGTTCCGAGGTGTGGAGTATGTATGCTGTCCACCTCCTGCAACTCCCAACCCATCTGGGATGGCAGCTGGTGACCCCTCTACCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | GGTCTGGACCTGAAAGCGCATCTGCTGGGCCTTCTCAGGATCCACTaGGGCCACGTGCTGGTAGTGCCTCAGAGTGTGCCTCTGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLDLKAHLLGLLRIH*GHVLVVPQSVPLLF Trigger: AAAGAGCAGAGGCACACTCTGAGGCACTACCAGCACGTGGCCGCAGTGGATCCTGAGAAGGCCCAGCAGATGCGCTTTCAGGTCCAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | TCCACCAGGCGTTGCCGTTCACCAGACACTTGTTCTTCCAGGGTCTaGAGAATGGACTGGAAGTGCTCATTCAGGGCCTGCCTGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: STRRCRSPDTCSSRV*RMDWKCSFRACLSA Trigger: GGCGGACAGGCAGGCCCTGAATGAGCACTTCCAGTCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | GGGGTCACCAGCTGCCATCCCAGATGGGTTGGGAGTTGCAGGAGGTaGACAGCATACATACTCCACACCTCGGAACCGATCAGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVTSCHPRWVGSCRR*TAYILHTSEPIRAT Trigger: TGTGGCTCTGATCGGTTCCGAGGTGTGGAGTATGTATGCTGTCCACCTCCTGCAACTCCCAACCCATCTGGGATGGCAGCTGGTGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 90 bp | TTGATCAGAGCGATGACTCTGGTGGCGTGGGTCTCCACCAGGCGTTaGCGTTCACCAGACACTTGTTCTTCCAGGGTCTGCAGAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LIRAMTLVAWVSTRR*RSPDTCSSRVCRMD Trigger: GTCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGCTCTGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | AGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGGCTGGAGGCTACCTTaGTCCTCACTGCTGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGNKNEFVKISLPHRKLGGWRLP*SSLLLP Trigger: CGGGAGCAGCAGTGAGGACAAAGGTAGCCTCCAGCC...TCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | TTCCCCAGGCATGCCAAAGTAAACATCCACACCATCAGTAGGCCTTaGGGTGGGAGTGACTCTGCTAACCATGACAGGGGTGTGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPRHAKVNIHTISRP*GGSDSANHDRGVGA Trigger: AGCTCCCACACCCCTGTCATGGTTAGCAGAGTCACTCCCACCCCAAGGCCTACTGATGGTGTGGATGTTTACTTTGGCATGCCTGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | CAGAATGGACTGGAAGTGCTCATTCAGGGCCTGCCTGTCCGCCTTTaGCAGGTTCTTAGATTGGCTGTCAGCCATGGCCCATTCACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QNGLEVLIQGLPVRL*QVLRLAVSHGPFTH Trigger: ATGCGTGAATGGGCCATGGCTGACAGCCAATCTAAGAACCTGCCAAAGGCGGACAGGCAGGCCCTGAATGAGCACTTCCAGTCCATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | ATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTGGGGCAGATGGGTTGGGAGTaGCAGGAGGTGGACAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: MNLSRSPSPTGSWELGLGQMGWE*QEVDSI Trigger: TATGCTGTCCACCTCCTGCAACTCCCAACCCATCTG...CCCCAAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 90 bp | TGCTCATTCAGGGCCTGCCTGTCCGCCTTTGGCAGGTTCTTAGATTaGCTGTCAGCCATGGCCCATTCACGCATCACCTCATTAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFRACLSAFGRFLD*LSAMAHSRITSLIW Trigger: CCAGATTAATGAGGTGATGCGTGAATGGGCCATGGCTGACAGCCAATCTAAGAACCTGCCAAAGGCGGACAGGCAGGCCCTGAATGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGCCATCCCAGATGGGTaGGGAGTTGCAGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETRMNLSRSPSPTGSWELAIPDG*GVAGGG Trigger: TCCACCTCCTGCAACTCCCAACCCATCTGGGATGGC...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | AAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTGGTCTCCACCAGGCGTaGCCGTTCACCAGACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KNEFVKISLPHRKLGVGFGLHQA*PFTRHL Trigger: CAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACC...AAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | GAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGCTCGGCGCTGGTCGTaGATCAGAGCGATGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETRMNLSRSPSPTGSWELARRWS*IRAMTL Trigger: CAGAGTCATCGCTCTGATCAACGACCAGCGCCGAGC...CAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | AATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGGAGTTGGGTTTGGGGATCTGTGGACCCTTTaGGAAGGGTCACTGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NEFVKISLPHRKLGVGFGDLWTL*EGSLGD Trigger: ATCCCCCAGTGACCCTTCCAAAAGGGTCCACAGATC...CCCAAACCCAACTCCCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | GAAGGGGAAACAAGAATGAATTTGTCAAGATCTCCCTCCCCCACCGGAAGCTGGCCTGATGCCTCCTGGTaGAACTCTCACACTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGETRMNLSRSPSPTGSWPDASW*NSHTGP Trigger: TGGACCAGTGTGAGAGTTCAACCAGGAGGCATCAGG...CCAGCTTCCGGTGGGGGAGGGAGATCTTGACAAATTCATTCTTGTTTCCCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | GCCGGGTGGGAAAGAGGACTTTATTGGGATGTTAGTGAAGAAACGTGGGATGGTTGGCAGGTTCTTAGATaGGCTGTCAGCCATGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGWERGLYWDVSEETWDGWQVLR*AVSHGP Trigger: TGGGCCATGGCTGACAGCCAATCTAAGAACCTGCCA...ACCATCCCACGTTTCTTCACTAACATCCCAATAAAGTCCTCTTTCCCACCCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS-3UTR CAA 90 bp | TTCCAGGGAGTGACATACATACCTGGGACCCAGGTCACCTTAAGGAGCAATAAACCGTTCACCAGACACTaGTTCTTCCAGGGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FQGVTYIPGTQVTLRSNKPFTRH*FFQGLQ Trigger: CTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGG...TTTATTGCTCCTTAAGGTGACCTGGGTCCCAGGTATGTATGTCACTCCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS TCA 72 bp | CTCCAGCACGCGCTGCGGGTCCAGAAGACAGCGTCGTaGTCGCTGTGGGTCTGGTTCCCAGCGGCCGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: LQHALRVQKTAS*SLWVWFPAAGA Trigger: CGCACCGGCCGCTGGGAACCAGACCCACAGCGATCACGACGCTGTCTTCTGGACCCGCAGCGCGTGCTGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | GGTACCCCCACACCAGCGCTCCATCGGGATGGCCTGTaGAGCCTGCTCCACGCGTGCTATGTGCAGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GTPTPALHRDGL*SLLHACYVQLG Trigger: CCCGAGCTGCACATAGCACGCGTGGAGCAGGCTGCACAGGCCATCCCGATGGAGCGCTGGTGTGGGGGTACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | GGCAGGCAATGGAAGGGCACAACCTCATGGTGGGGGTaGGCGCATCTGCCACTCCGGGTACCCCCACACCAG | + |
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Preference number: 6 (lower is better) Translates to: GRQWKGTTSWWG*AHLPLRVPPHQ Trigger: CTGGTGTGGGGGTACCCGGAGTGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | TCGCCAGGCAGGCAATGGAAGGGCACAACCTCATGGTaGGGGTGGGCGCATCTGCCACTCCGGGTACCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPGRQWKGTTSW*GWAHLPLRVPP Trigger: TGGGGGTACCCGGAGTGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | GTCGTGATCGCTGTGGGTCTGGTTCCCAGCGGCCGGTaGGCAGGTCCCGGTGAAGGGTTAGACGCCCACATA | + |
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Preference number: 6 (lower is better) Translates to: VVIAVGLVPSGR*AGPGEGLDAHI Trigger: TATGTGGGCGTCTAACCCTTCACCGGGACCTGCGCACCGGCCGCTGGGAACCAGACCCACAGCGATCACGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | CCACACCAGCGCTCCATCGGGATGGCCTGTGCAGCCTaGTCCACGCGTGCTATGTGCAGCTCGGGGTACATC | + |
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Preference number: 6 (lower is better) Translates to: PHQRSIGMACAA*STRAMCSSGYI Trigger: GATGTACCCCGAGCTGCACATAGCACGCGTGGAGCAGGCTGCACAGGCCATCCCGATGGAGCGCTGGTGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | AATTCGCCAGGCAGGCAATGGAAGGGCACAACCTCATaGTGGGGGTGGGCGCATCTGCCACTCCGGGTACCC | + |
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Preference number: 6 (lower is better) Translates to: NSPGRQWKGTTS*WGWAHLPLRVP Trigger: GGGTACCCGGAGTGGCAGATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGAATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 72 bp | GCCAGGAAACCTTCCAGGGCTGCTCGGCGCTGGTCGTaGATCAGAGCGATGACTCTGGTGGCGTGGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ARKPSRAARRWS*IRAMTLVAWVS Trigger: GGAGACCCACGCCACCAGAGTCATCGCTCTGATCAACGACCAGCGCCGAGCAGCCCTGGAAGGTTTCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 90 bp | TGTAAGGCTGCCAGGAAACCTTCCAGGGCTGCTCGGCGCTGGTCGTaGATCAGAGCGATGACTCTGGTGGCGTGGGTCTCCACCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CKAARKPSRAARRWS*IRAMTLVAWVSTRR Trigger: ACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGCTCTGATCAACGACCAGCGCCGAGCAGCCCTGGAAGGTTTCCTGGCAGCCTTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | TCGGGGTACATCTGTCTGCAGTACTCCAGCACGCGCTaGGGGTCCAGAAGACAGCGTCGTGATCGCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGYICLQYSSTR*GSRRQRRDRCG Trigger: CCCACAGCGATCACGACGCTGTCTTCTGGACCCGCAGCGCGTGCTGGAGTACTGCAGACAGATGTACCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | GGGATGGCCTGTGCAGCCTGCTCCACGCGTGCTATGTaGAGCTCGGGGTACATCTGTCTGCAGTACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GMACAACSTRAM*SSGYICLQYSS Trigger: GCTGGAGTACTGCAGACAGATGTACCCCGAGCTGCACATAGCACGCGTGGAGCAGGCTGCACAGGCCATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | ATTCGGGAGGCTGGAGGCTACCTTTGTCCTCACTGCTaGTCCCGGGCACAGAGGCGTCCAGTTCACTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: IREAGGYLCPHC*SRAQRRPVHWD Trigger: GTCCCAGTGAACTGGACGCCTCTGTGCCCGGGAGCAGCAGTGAGGACAAAGGTAGCCTCCAGCCTCCCGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | AAGGCTGCCAGGAAACCTTCCAGGGCTGCTCGGCGCTaGTCGTTGATCAGAGCGATGACTCTGGTGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: KAARKPSRAARR*SLIRAMTLVAW Trigger: CCACGCCACCAGAGTCATCGCTCTGATCAACGACCAGCGCCGAGCAGCCCTGGAAGGTTTCCTGGCAGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 90 bp | GGCCCTGAGAGCTGCAGGCCTCCTGAGCCTCCTGATGCCTCCTGGTaGAACTCTCACACTGGTCCATACGCTCCTGGTGCAAGAACCGAC | + |
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Preference number: 6 (lower is better) Translates to: GPESCRPPEPPDASW*NSHTGPYAPGARTD Trigger: GTCGGTTCTTGCACCAGGAGCGTATGGACCAGTGTGAGAGTTCAACCAGGAGGCATCAGGAGGCTCAGGAGGCCTGCAGCTCTCAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | CTCCATCGGGATGGCCTGTGCAGCCTGCTCCACGCGTaGTATGTGCAGCTCGGGGTACATCTGTCTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LHRDGLCSLLHA*YVQLGVHLSAV Trigger: TACTGCAGACAGATGTACCCCGAGCTGCACATAGCACGCGTGGAGCAGGCTGCACAGGCCATCCCGATGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | GCGATGACTCTGGTGGCGTGGGTCTCCACCAGGCGTTaGCGTTCACCAGACACTTGTTCTTCCAGGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AMTLVAWVSTRR*RSPDTCSSRVC Trigger: GCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | CTGAAAGCGCATCTGCTGGGCCTTCTCAGGATCCACTaGGGCCACGTGCTGGTAGTGCCTCAGAGTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LKAHLLGLLRIH*GHVLVVPQSVP Trigger: AGGCACACTCTGAGGCACTACCAGCACGTGGCCGCAGTGGATCCTGAGAAGGCCCAGCAGATGCGCTTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | AGCAGGGCTTCACTCACGAATTCGCCAGGCAGGCAATaGAAGGGCACAACCTCATGGTGGGGGTGGGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: SRASLTNSPGRQ*KGTTSWWGWAH Trigger: ATGCGCCCACCCCCACCATGAGGTTGTGCCCTTCCATTGCCTGCCTGGCGAATTCGTGAGTGAAGCCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | CGCTGGTCGTTGATCAGAGCGATGACTCTGGTGGCGTaGGTCTCCACCAGGCGTTGCCGTTCACCAGACACT | + |
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Preference number: 6 (lower is better) Translates to: RWSLIRAMTLVA*VSTRRCRSPDT Trigger: AGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGCTCTGATCAACGACCAGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | CACTGCTGCTCCCGGGCACAGAGGCGTCCAGTTCACTaGGACCCAAGTGTTCAGCAAGGAGAAGCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: HCCSRAQRRPVH*DPSVQQGEAPG Trigger: TCCAGGAGCTTCTCCTTGCTGAACACTTGGGTCCCAGTGAACTGGACGCCTCTGTGCCCGGGAGCAGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | GGACCGGGTAGAGGGGTCACCAGCTGCCATCCCAGATaGGTTGGGAGTTGCAGGAGGTGGACAGCATACATA | + |
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Preference number: 6 (lower is better) Translates to: GPGRGVTSCHPR*VGSCRRWTAYI Trigger: TATGTATGCTGTCCACCTCCTGCAACTCCCAACCCATCTGGGATGGCAGCTGGTGACCCCTCTACCCGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | GAAGGAGCCAGTTCATCCCGCTGGATATCTGACGAGTaGAAGGGAAACCCCCTCGGGGCGGATGCATTCACC | + |
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Preference number: 6 (lower is better) Translates to: EGASSSRWISDE*KGNPLGADAFT Trigger: GGTGAATGCATCCGCCCCGAGGGGGTTTCCCTTCCACTCGTCAGATATCCAGCGGGATGAACTGGCTCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 72 bp | AGCGATGACTCTGGTGGCGTGGGTCTCCACCAGGCGTaGCCGTTCACCAGACACTTGTTCTTCCAGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SDDSGGVGLHQA*PFTRHLFFQGL Trigger: CAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | CTGGTTGAACTCTCACACTGGTCCATACGCTCCTGGTaGAAGAACCGACAGCCTTCGGGCACTAGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVELSHWSIRSW*KNRQPSGTSRA Trigger: AGCCCTGCTAGTGCCCGAAGGCTGTCGGTTCTTGCACCAGGAGCGTATGGACCAGTGTGAGAGTTCAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | CTCCTGGTTGAACTCTCACACTGGTCCATACGCTCCTaGTGCAAGAACCGACAGCCTTCGGGCACTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLVELSHWSIRS*CKNRQPSGTSR Trigger: CCTGCTAGTGCCCGAAGGCTGTCGGTTCTTGCACCAGGAGCGTATGGACCAGTGTGAGAGTTCAACCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | AGGGCCTGCCTGTCCGCCTTTGGCAGGTTCTTAGATTaGCTGTCAGCCATGGCCCATTCACGCATCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: RACLSAFGRFLD*LSAMAHSRITS Trigger: TGAGGTGATGCGTGAATGGGCCATGGCTGACAGCCAATCTAAGAACCTGCCAAAGGCGGACAGGCAGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | CTGGAAGTGCTCATTCAGGGCCTGCCTGTCCGCCTTTaGCAGGTTCTTAGATTGGCTGTCAGCCATGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LEVLIQGLPVRL*QVLRLAVSHGP Trigger: TGGGCCATGGCTGACAGCCAATCTAAGAACCTGCCAAAGGCGGACAGGCAGGCCCTGAATGAGCACTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 90 bp | TCTGGTGGCGTGGGTCTCCACCAGGCGTTGCCGTTCACCAGACACTaGTTCTTCCAGGGTCTGCAGAATGGACTGGAAGTGCTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: SGGVGLHQALPFTRH*FFQGLQNGLEVLIQ Trigger: CTGAATGAGCACTTCCAGTCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 90 bp | GTTGATCAGAGCGATGACTCTGGTGGCGTGGGTCTCCACCAGGCGTaGCCGTTCACCAGACACTTGTTCTTCCAGGGTCTGCAGAATGGA | + |
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Preference number: 6 (lower is better) Translates to: VDQSDDSGGVGLHQA*PFTRHLFFQGLQNG Trigger: TCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCACGCCACCAGAGTCATCGCTCTGATCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CAA 72 bp | GTGGGTCTCCACCAGGCGTTGCCGTTCACCAGACACTaGTTCTTCCAGGGTCTGCAGAATGGACTGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: VGLHQALPFTRH*FFQGLQNGLEV Trigger: CACTTCCAGTCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACGCCTGGTGGAGACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS GCA 72 bp | CGTTGCCGTTCACCAGACACTTGTTCTTCCAGGGTCTaGAGAATGGACTGGAAGTGCTCATTCAGGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RCRSPDTCSSRV*RMDWKCSFRAC Trigger: GCAGGCCCTGAATGAGCACTTCCAGTCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAACGGCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | GTTCACCAGACACTTGTTCTTCCAGGGTCTGCAGAATaGACTGGAAGTGCTCATTCAGGGCCTGCCTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VHQTLVLPGSAE*TGSAHSGPACP Trigger: CGGACAGGCAGGCCCTGAATGAGCACTTCCAGTCCATTCTGCAGACCCTGGAAGAACAAGTGTCTGGTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS TCA 72 bp | GGAGTTAGCTTCTCTCTCCCAGAGGAGGATGACTCTTaGTCTGTGGACCCTTTTGGAAGGGTCACTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GVSFSLPEEDDS*SVDPFGRVTGG Trigger: TCCCCCAGTGACCCTTCCAAAAGGGTCCACAGATCAAGAGTCATCCTCCTCTGGGAGAGAGAAGCTAACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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| CDS CCA 72 bp | CATGCCAAAGTAAACATCCACACCATCAGTAGGCCTTaGGGTGGGAGTGACTCTGCTAACCATGACAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: HAKVNIHTISRP*GGSDSANHDRG Trigger: ACCCCTGTCATGGTTAGCAGAGTCACTCCCACCCCAAGGCCTACTGATGGTGTGGATGTTTACTTTGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006828.9 |
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