Pregenerated sensors for APLNR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044338Ensembl transcript IDs: ENSMUST00000057019.9, ENSMUST00000184728.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCCACCACCACAACCCCCTTTCCTACTCCAGGAGCAGGATCTCTaGCAGAGATGGTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PPPPQPPFLLQEQDL*QRWSNRIKLGSSCF Trigger: GAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGATCCTGCTCCTGGAGTAGGAAAGGGGGTTGTGGTGGTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 90 bp | GGTGAGGAAAAGCTGCCTCTGCTGCTATCTGTCCCATGCTGTGGTTaGGTTTGTTGTCTCCCAGAAGCCTCCTGCAGCTCGAACTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GEEKLPLLLSVPCCG*VCCLPEASCSSNWL Trigger: CAGCCAGTTCGAGCTGCAGGAGGCTTCTGGGAGACAACAAACTCAACCACAGCATGGGACAGATAGCAGCAGAGGCAGCTTTTCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 90 bp | CCACAACCCCCTTTCCTACTCCAGGAGCAGGATCTCTGCCAGAGATaGTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATGGAATA | + |
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Preference number: 1 (lower is better) Translates to: PQPPFLLQEQDLCQR*SNRIKLGSSCFHGI Trigger: TATTCCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGATCCTGCTCCTGGAGTAGGAAAGGGGGTTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 90 bp | GTTTGTTGTCTCCCAGAAGCCTCCTGCAGCTCGAACTGGCTGCTTTaGGAATGGCCTGGCGGAGAAAGTAGCTGTGTGAAAGTTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: VCCLPEASCSSNWLL*EWPGGESSCVKVSG Trigger: GCCAGAAACTTTCACACAGCTACTTTCTCCGCCAGGCCATTCTCAAAGCAGCCAGTTCGAGCTGCAGGAGGCTTCTGGGAGACAACAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 90 bp | TCCAGGAGCAGGATCTCTGCCAGAGATGGTCCAACCGCATCAAGCTaGGCTCTTCCTGTTTCCATGGAATATGTCTTGTCCTTGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SRSRISARDGPTASS*ALPVSMEYVLSLVS Trigger: GGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGATCCTGCTCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 90 bp | CCAGAGATGGTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATaGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: PEMVQPHQAGLFLFP*NMSCPWCPEPSKNK Trigger: TTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 90 bp | AGACAGGAGAAAGATCAGCTCTACAGTTCACAGTTCTGTAGGAGGTaGAGGGATGAGGATTGGGATAGGGGAGGCAAGCAGCATACAAAC | + |
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Preference number: 1 (lower is better) Translates to: RQEKDQLYSSQFCRR*RDEDWDRGGKQHTN Trigger: GTTTGTATGCTGCTTGCCTCCCCTATCCCAATCCTCATCCCTCCACCTCCTACAGAACTGTGAACTGTAGAGCTGATCTTTCTCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 90 bp | CATCAAGCTGGGCTCTTCCTGTTTCCATGGAATATGTCTTGTCCTTaGTGTCCAGAGCCCTCCAAGAACAAAACCCGGAATATGCACACC | + |
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Preference number: 1 (lower is better) Translates to: HQAGLFLFPWNMSCP*CPEPSKNKTRNMHT Trigger: GGTGTGCATATTCCGGGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 90 bp | GAGGGGAAGGGACCCACTAGAAGAGAAAGAGTTAGATCTAGCAAGTaGGTAGTTGACAGAAATAATTTCTCCAGCAGAGAAAGCAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: EGKGPTRRERVRSSK*VVDRNNFSSRESKK Trigger: CTTTTTGCTTTCTCTGCTGGAGAAATTATTTCTGTCAACTACTCACTTGCTAGATCTAACTCTTTCTCTTCTAGTGGGTCCCTTCCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAACTGGGAGAGGAACTGGGGCCCAGCTCCAGACTTCTCCAGCCTTAGGATGGAGGGATGAGGATTaGGATAGGGGAGGCAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CGTGRGTGAQLQTSPALGWRDED*DRGGKQ Trigger: CTGCTTGCCTCCCCTATCCCAATCCTCATCCCTCCA...TCCTAAGGCTGGAGAAGTCTGGAGCTGGGCCCCAGTTCCTCTCCCAGTTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCCAGTGGGGGTGGATCCACACAGTTCTGTAGGAGGTaGAGGGATGAGGATTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LDTDQPSEFPKSSGGGSTQFCRR*RDEDWD Trigger: ATCCCAATCCTCATCCCTCCACCTCCTACAGAACTG...TGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCCGTATCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR TCA 90 bp | GGACCAGCCGTCGGAGTTCCCCAAATCCAGTGGGGGTGGATCCACAATGGATCTCAACCTCAGAAATGTTaGACAGCTGAGCTGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GPAVGVPQIQWGWIHNGSQPQKC*TAELFA Trigger: TGCAAACAGCTCAGCTGTTCAACATTTCTGAGGTTG...AGATCCATTGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR GCA 90 bp | GGGACTAGAGCACTAATTCTTTGCCTACATACAGCCACCTGCTGGTTCTCAGAATTGGGTCAGACCCGCTaGACCAGGCTTCCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GTRALILCLHTATCWFSELGQTR*TRLPSG Trigger: ACCAGAGGGAAGCCTGGTGCAGCGGGTCTGACCCAA...TTCTGAGAACCAGCAGGTGGCTGTATGTAGGCAAAGAATTAGTGCTCTAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCAAGAAAGTGGCCTCCTCAAGACCCCTAAAGAGAGTGAGAGGGGTGAGAAAAGGACCAGATGCCACTaGGAAAACAGCTCCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: WQESGLLKTPKESERGEKRTRCH*ENSSLQ Trigger: CTGTAGGGAGCTGTTTTCTCAGTGGCATCTGGTCCT...TTTCTCACCCCTCTCACTCTCTTTAGGGGTCTTGAGGAGGCCACTTTCTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGCCAGAGATGGTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATGGCTACATACAGCCACCTaGTGGTTCTCAGAAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: SLPEMVQPHQAGLFLFPWLHTAT*WFSENR Trigger: CCTGTTTTCTGAGAACCAGCAGGTGGCTGTATGTAG...CCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCCATGGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCAACTGGGAGAGGAACTaGGGCCCAGCTCCAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: FPWNMSCPWCPEPSKNKTNWERN*GPAPDF Trigger: GAAGTCTGGAGCTGGGCCCCAGTTCCTCTCCCAGTT...GGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CAA 90 bp | GCATCAAGCTGGGCTCTTCCTGTTTCCATGGAATATGTCTTGTCCTaGGTGTCCAGAGCCCTCCAAGAACAAAACCCGGAATATGCACAC | + |
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Preference number: 2 (lower is better) Translates to: ASSWALPVSMEYVLS*VSRALQEQNPEYAH Trigger: GTGTGCATATTCCGGGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CAA 90 bp | CCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATGGAATATGTCTaGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCCGGAATAT | + |
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Preference number: 2 (lower is better) Translates to: PTASSWALPVSMEYV*SLVSRALQEQNPEY Trigger: ATATTCCGGGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCCAGTGGGGGTGGATCCACAAAGTTAAGAGACTTGTaGAAGCTCAACCTCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LDTDQPSEFPKSSGGGSTKLRDL*KLNLRN Trigger: ATTTCTGAGGTTGAGCTTGCACAAGTCTCTTAACTT...TGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCCGTATCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAACTGGGAGAGGAACTGGGGCCCAGCTCCAGACTTCTCCAGCCTTAGGAGCATCACAGAGATTCTaGCAAAGAGAAATTGCTATT | + |
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Preference number: 2 (lower is better) Translates to: CGTGRGTGAQLQTSPALGASQRF*QREIAI Trigger: AATAGCAATTTCTCTTTGGCAGAATCTCTGTGATGC...TCCTAAGGCTGGAGAAGTCTGGAGCTGGGCCCCAGTTCCTCTCCCAGTTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAACCATTCTTCCCCAAGTaGACTCTGAGACCTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: STNIDFFPRYGPAVGVPQPFFPK*TLRPTE Trigger: CTCTGTAGGTCTCAGAGTCCACTTGGGGAAGAATGG...TTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCATGGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCCAAAGGCCCCACTATTaGTTTTGTCCTGGAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: FPWNMSCPWCPEPSKNKTQRPHY*FCPGDP Trigger: GGGATCTCCAGGACAAAATCAATAGTGGGGCCTTTG...GGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTATTGGTAGGATTCACTAAGCATCACAGAGATTCTGCCAAAGAGAAATTGCAGGGAAGAAGGCGCTaGGGTACAGACAGGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GLLVGFTKHHRDSAKEKLQGRRR*GTDRKV Trigger: AACCTTCCTGTCTGTACCCCAGCGCCTTCTTCCCTG...CAATTTCTCTTTGGCAGAATCTCTGTGATGCTTAGTGAATCCTACCAATAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR TCA 90 bp | GGGTTATTGGTAGGATTCACTAAGCATCACAGAGATTCTGCCAAAGAGAAATTGGAAATGTTGAACAGCTaGGCTGTTTGCAAGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GLLVGFTKHHRDSAKEKLEMLNS*AVCKAP Trigger: TGGAGCCTTGCAAACAGCTCAGCTGTTCAACATTTC...CAATTTCTCTTTGGCAGAATCTCTGTGATGCTTAGTGAATCCTACCAATAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGCAGCATACAAACTAAATACAGACTCCCCTCTAATCCTTTCTCTGTTGAGAGCACTAATTCTTTaGCTACATACAGCCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: RQAAYKLNTDSPLILSLLRALIL*LHTATC Trigger: GCAGGTGGCTGTATGTAGGCAAAGAATTAGTGCTCT...CAACAGAGAAAGGATTAGAGGGGAGTCTGTATTTAGTTTGTATGCTGCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCATGGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCCATGCATGTGCACATTaGTATACCTTTATATACACC | + |
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Preference number: 2 (lower is better) Translates to: FPWNMSCPWCPEPSKNKTHACAH*YTFIYT Trigger: GGTGTATATAAAGGTATATCAATGTGCACATGCATG...GGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | AGTCTCTTCTTGCTACTGTGGAACTGGGAGAGGAACTaGGGCCCAGCTCCAGACTTCTCCAGCCTTAGGACC | + |
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Preference number: 3 (lower is better) Translates to: SLFLLLWNWERN*GPAPDFSSLRT Trigger: GGTCCTAAGGCTGGAGAAGTCTGGAGCTGGGCCCCAGTTCCTCTCCCAGTTCCACAGTAGCAAGAAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 72 bp | CTCCCAGAAGCCTCCTGCAGCTCGAACTGGCTGCTTTaGGAATGGCCTGGCGGAGAAAGTAGCTGTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LPEASCSSNWLL*EWPGGESSCVK Trigger: TTTCACACAGCTACTTTCTCCGCCAGGCCATTCTCAAAGCAGCCAGTTCGAGCTGCAGGAGGCTTCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 72 bp | AAGCTGCCTCTGCTGCTATCTGTCCCATGCTGTGGTTaGGTTTGTTGTCTCCCAGAAGCCTCCTGCAGCTCG | + |
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Preference number: 3 (lower is better) Translates to: KLPLLLSVPCCG*VCCLPEASCSS Trigger: CGAGCTGCAGGAGGCTTCTGGGAGACAACAAACTCAACCACAGCATGGGACAGATAGCAGCAGAGGCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR GCA 72 bp | GGTGTCCAGAGCCCTCCAAGAACAAAACCCGGAATATaGACACCCATGTCCAGCTCACAAAGGCCCCACTAT | + |
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Preference number: 3 (lower is better) Translates to: GVQSPPRTKPGI*TPMSSSQRPHY Trigger: ATAGTGGGGCCTTTGTGAGCTGGACATGGGTGTGCATATTCCGGGTTTTGTTCTTGGAGGGCTCTGGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | AGATACGGACCAGCCGTCGGAGTTCCCCAAATCCAGTaGGGGTGGATCCACAATGGATCTATTCTACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: RYGPAVGVPQIQ*GWIHNGSILPP Trigger: TGGAGGTAGAATAGATCCATTGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCCGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | GTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATaGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: VQPHQAGLFLFP*NMSCPWCPEPS Trigger: GGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | GGAAAAGCTGCCTCTGCTGCTATCTGTCCCATGCTGTaGTTGAGTTTGTTGTCTCCCAGAAGCCTCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: GKAASAAICPML*LSLLSPRSLLQ Trigger: CTGCAGGAGGCTTCTGGGAGACAACAAACTCAACCACAGCATGGGACAGATAGCAGCAGAGGCAGCTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCCAGTGGGGGTGGATCCACATTCAGTCCTGTTGCCTaGAGATTCTCACAGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: LDTDQPSEFPKSSGGGSTFSPVA*RFSQTV Trigger: AACTGTCTGTGAGAATCTCAAGGCAACAGGACTGAA...TGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCCGTATCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR GCA 72 bp | GAGCTCCTGGCGCTGGGGACTAGAGCACTAATTCTTTaGCTACATACAGCCACCTGCTGGTTCTCAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: ELLALGTRALIL*LHTATCWFSEN Trigger: GTTTTCTGAGAACCAGCAGGTGGCTGTATGTAGGCAAAGAATTAGTGCTCTAGTCCCCAGCGCCAGGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CAA 90 bp | AGCACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAATACAGACAGGAAGGTTaGAGGGGAAGGGACCCACTA | + |
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Preference number: 3 (lower is better) Translates to: STNIDFFPRYGPAVGVPQYRQEG*RGRDPL Trigger: TAGTGGGTCCCTTCCCCTCAAACCTTCCTGTCTGTA...TTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | GACTCTGAGACCTACAGAGGCACAGGGGAAAGTGAGTaGGGGGTTCACCCTAGTCCTTCATCGATAAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: DSETYRGTGESE*GVHPSPSSIKF Trigger: AAACTTTATCGATGAAGGACTAGGGTGAACCCCCCACTCACTTTCCCCTGTGCCTCTGTAGGTCTCAGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | AGGATCTCTGCCAGAGATGGTCCAACCGCATCAAGCTaGGCTCTTCCTGTTTCCATGGAATATGTCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: RISARDGPTASS*ALPVSMEYVLS Trigger: GGACAAGACATATTCCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | GGGCTCTTCCTGTTTCCATGGAATATGTCTTGTCCTTaGTGTCCAGAGCCCTCCAAGAACAAAACCCGGAAT | + |
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Preference number: 3 (lower is better) Translates to: GLFLFPWNMSCP*CPEPSKNKTRN Trigger: ATTCCGGGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CAA 90 bp | TTTCCATGGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCGCCCCACTATTGATTTaGTCCTGGAGATCCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: FPWNMSCPWCPEPSKNKTAPLLI*SWRSPQ Trigger: CTGTGGGGATCTCCAGGACAAAATCAATAGTGGGGC...GGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAGCAGCATACAAACTAAATACAGACTCCCCTCTAATCCTTTCTCTGTTGGAACAGCTGAGCTGTTaGCAAGGCTCCATCCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: RQAAYKLNTDSPLILSLLEQLSC*QGSIPF Trigger: GAAAGGGATGGAGCCTTGCAAACAGCTCAGCTGTTC...CAACAGAGAAAGGATTAGAGGGGAGTCTGTATTTAGTTTGTATGCTGCTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CAA 90 bp | CAGACAGGAAGGTTTGAGGGGAAGGGACCCACTAGAAGAGAAAGAGTTAGATCTAGGAAGTTAAGAGACTaGTGCAAGCTCAACCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QTGRFEGKGPTRRERVRSRKLRD*CKLNLR Trigger: TCTGAGGTTGAGCTTGCACAAGTCTCTTAACTTCCT...AGATCTAACTCTTTCTCTTCTAGTGGGTCCCTTCCCCTCAAACCTTCCTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 72 bp | ACTTGTGCAAGCTCAACCTCAGAAATGTTGAACAGCTaGGCTGTTTGCAAGGCTCCATCCCTTTCCGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: TCASSTSEMLNS*AVCKAPSLSAK Trigger: TTTAGCGGAAAGGGATGGAGCCTTGCAAACAGCTCAGCTGTTCAACATTTCTGAGGTTGAGCTTGCACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR GCA 72 bp | CAAATAGCCTTACCTAACCAAGTGAGTGACTCTTGGTaGCAAGTAGCACCAAAACCTATAGAGATGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: QIALPNQVSDSW*QVAPKPIEMVG Trigger: CCCCACCATCTCTATAGGTTTTGGTGCTACTTGGCACCAAGAGTCACTCACTTGGTTAGGTAAGGCTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR-3UTR CAA 90 bp | ACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCACTGATCCAACTTTTTaGAAAGATACAGAGCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TNIDFFPRYGPAVGVPQITDPTF*KDTELL Trigger: CAGGAGCTCTGTATCTTTCAAAAAAGTTGGATCAGT...GATTTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CCA 72 bp | AAGCAAATAGCCTTACCTAACCAAGTGAGTGACTCTTaGTGCCAAGTAGCACCAAAACCTATAGAGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: KQIALPNQVSDS*CQVAPKPIEMV Trigger: CACCATCTCTATAGGTTTTGGTGCTACTTGGCACCAAGAGTCACTCACTTGGTTAGGTAAGGCTATTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR TCA 72 bp | GGACCCACTAGAAGAGAAAGAGTTAGATCTAGCAAGTaGGTAGTTGACAGAAATAATTTCTCCAGCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: GPTRRERVRSSK*VVDRNNFSSRE Trigger: TTCTCTGCTGGAGAAATTATTTCTGTCAACTACTCACTTGCTAGATCTAACTCTTTCTCTTCTAGTGGGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | CTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCCAGTGGGGGTGGATCCACATGGCCACGGCCCCGCTaGCTCGCAGCCTTAGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LDTDQPSEFPKSSGGGSTWPRPR*LAALAE Trigger: CTCGGCTAAGGCTGCGAGTCAGCGGGGCCGTGGCCA...TGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCCGTATCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | TGTGGAACTGGGAGAGGAACTGGGGCCCAGCTCCAGACTTCTCCAGCCTTAGGACATTGGCCACCGGCCTaGCAATGGCCAGGTATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGTGRGTGAQLQTSPALGHWPPA*QWPGIG Trigger: ACCGATACCTGGCCATTGTCAGGCCGGTGGCCAATG...TCCTAAGGCTGGAGAAGTCTGGAGCTGGGCCCCAGTTCCTCTCCCAGTTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | TCTCTGCCAGAGATGGTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATGGCTGCCAGGCTGGCAATaGAGATGTCAGCTGAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPEMVQPHQAGLFLFPWLPGWQ*RCQLSV Trigger: GACGCTCAGCTGACATCTTCATTGCCAGCCTGGCAG...CCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | GTGGGGGTGGATCCACAATGGATCTATTCTACCTCCATAGGTCCATTCTTCCCCCTCCCTTTCCCATGTTaGGGCCAGGGCCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGVDPQWIYSTSIGPFFPLPFPC*GQGPGC Trigger: ACAGCCAGGGCCCTGGCCCCAACATGGGAAAGGGAG...GGGGAAGAATGGACCTATGGAGGTAGAATAGATCCATTGTGGATCCACCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CAA 72 bp | GCCTCTGCTGCTATCTGTCCCATGCTGTGGTTGAGTTaGTTGTCTCCCAGAAGCCTCCTGCAGCTCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASAAICPMLWLS*LSPRSLLQLEL Trigger: CAGTTCGAGCTGCAGGAGGCTTCTGGGAGACAACAAACTCAACCACAGCATGGGACAGATAGCAGCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | AGCACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAATCAGCACTACTGCTGTaGGGGGTGCCTTTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: STNIDFFPRYGPAVGVPQSALLL*GVPLHP Trigger: CGGGTGCAAAGGCACCCCTCACAGCAGTAGTGCTGA...TTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | CTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCCAGTGGGGGTGGATCCACAGGAAGAATAACTGGCTaGCTTCTCAGCACTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LDTDQPSEFPKSSGGGSTGRITG*LLSTTA Trigger: AGCAGTAGTGCTGAGAAGTCAGCCAGTTATTCTTCC...TGTGGATCCACCCCCACTGGATTTGGGGAACTCCGACGGCTGGTCCGTATCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | TGTGGAACTGGGAGAGGAACTGGGGCCCAGCTCCAGACTTCTCCAGCCTTAGGAATAAGTGGCCCACAGTaGCAAAGTCACCACAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGTGRGTGAQLQTSPALGISGPQ*QSHHKG Trigger: ACCTTTGTGGTGACTTTGCCACTGTGGGCCACTTAT...TCCTAAGGCTGGAGAAGTCTGGAGCTGGGCCCCAGTTCCTCTCCCAGTTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | GGGACTAGAGCACTAATTCTTTGCCTACATACAGCCACCTGCTGGTTCTCAGAACAAAGCCCACGGCAGTaGAGGACACCCCAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTRALILCLHTATCWFSEQSPRQ*RTPQGP Trigger: TGGGCCTTGGGGTGTCCTCCACTGCCGTGGGCTTTG...TTCTGAGAACCAGCAGGTGGCTGTATGTAGGCAAAGAATTAGTGCTCTAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CAA 72 bp | GCAGGGAAGAAGGCGCTGGGGTACAGACAGGAAGGTTaGAGGGGAAGGGACCCACTAGAAGAGAAAGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: AGKKALGYRQEG*RGRDPLEEKEL Trigger: TAACTCTTTCTCTTCTAGTGGGTCCCTTCCCCTCAAACCTTCCTGTCTGTACCCCAGCGCCTTCTTCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CAA 72 bp | TCTGCTGCTATCTGTCCCATGCTGTGGTTGAGTTTGTaGTCTCCCAGAAGCCTCCTGCAGCTCGAACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAAICPMLWLSL*SPRSLLQLELA Trigger: AGCCAGTTCGAGCTGCAGGAGGCTTCTGGGAGACAACAAACTCAACCACAGCATGGGACAGATAGCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | GAAAGAGGATCCAGGAGGCTCAGTCCTGATGGAGAGGATCACAAAAGCTCACCCCCCGGTAGGTATAAGTaGCCCACAGTGGCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGSRRLSPDGEDHKSSPPGRYK*PTVAKS Trigger: TGACTTTGCCACTGTGGGCCACTTATACCTACCGGG...GGGTGAGCTTTTGTGATCCTCTCCATCAGGACTGAGCCTCCTGGATCCTCTTTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | TGGCAAGAAAGTGGCCTCCTCAAGACCCCTAAAGAGAGTGAGAGGGGTGAGAAACGCTCCTTTCGGAAATaGCCAGCGATGGTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQESGLLKTPKESERGEKRSFRK*PAMVWA Trigger: TGCCCAAACCATCGCTGGCCATTTCCGAAAGGAGCG...TTTCTCACCCCTCTCACTCTCTTTAGGGGTCTTGAGGAGGCCACTTTCTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | GGGACTAGAGCACTAATTCTTTGCCTACATACAGCCACCTGCTGGTTCTCAGAACCTTTGCACCCGCTCTaGTCACAGCAGAGCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTRALILCLHTATCWFSEPLHPL*SQQSME Trigger: CTCCATGCTCTGCTGTGATCAGAGCGGGTGCAAAGG...TTCTGAGAACCAGCAGGTGGCTGTATGTAGGCAAAGAATTAGTGCTCTAGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | TGGCAAGAAAGTGGCCTCCTCAAGACCCCTAAAGAGAGTGAGAGGGGTGAGAAAAGCACTGGATCTTGGTaGCATTTTCCGAGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQESGLLKTPKESERGEKSTGSW*HFPRRL Trigger: CAGACGCCTCGGAAAATGGCACCAAGATCCAGTGCT...TTTCTCACCCCTCTCACTCTCTTTAGGGGTCTTGAGGAGGCCACTTTCTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | ACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCTCCGCAGGCCCTCAATaGGCTCCTTTCGGAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNIDFFPRYGPAVGVPQISAGPQ*APFGNG Trigger: GCCATTTCCGAAAGGAGCGCATTGAGGGCCTGCGGA...GATTTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | CCGGAATATGCACACCCATGTCCAGCTCACAAAGGCCCCACTATTGATTTTGTCAAGTCACAGGGCCAGTaGAGCAAACTGCCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PEYAHPCPAHKGPTIDFVKSQGQ*SKLPSM Trigger: CATGCTGGGCAGTTTGCTGCACTGGCCCTGTGACTT...GACAAAATCAATAGTGGGGCCTTTGTGAGCTGGACATGGGTGTGCATATTCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | CAGACAGGAAGGTTTGAGGGGAAGGGACCCACTAGAAGAGAAAGAGTTAGATCTAGCAGAGCATGGAGGTaGAGGCTTGGCGAAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTGRFEGKGPTRRERVRSSRAWR*RLGEIG Trigger: CCCGATTTCGCCAAGCCTGCACCTCCATGCTCTGCT...AGATCTAACTCTTTCTCTTCTAGTGGGTCCCTTCCCCTCAAACCTTCCTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | GGGACTAGAGCACTAATTCTTTGCCTACATACAGCCACCTGCTGGTTCTCAGAATGTGAGGGGTGCCTTTaGACCCGCTCTGATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRALILCLHTATCWFSECEGCL*TRSDHS Trigger: GCTGTGATCAGAGCGGGTGCAAAGGCACCCCTCACA...TTCTGAGAACCAGCAGGTGGCTGTATGTAGGCAAAGAATTAGTGCTCTAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | AGCACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAAGATCACAGCAGAGCATaGAGGTGCAGGCTTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: STNIDFFPRYGPAVGVPQDHSRA*RCRLGE Trigger: TTCGCCAAGCCTGCACCTCCATGCTCTGCTGTGATC...TTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | CCGGAATATGCACACCCATGTCCAGCTCACAAAGGCCCCACTATTGATTTTGTCGGTCAAGTCAGCCACTaGCAGGCTGGCAATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PEYAHPCPAHKGPTIDFVGQVSH*QAGNED Trigger: ATCTTCATTGCCAGCCTGGCAGTGGCTGACTTGACC...GACAAAATCAATAGTGGGGCCTTTGTGAGCTGGACATGGGTGTGCATATTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | TTTCCATGGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCATGGAGGTGCAGGCTTaGCGAAATCGGGGGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPWNMSCPWCPEPSKNKTMEVQA*RNRGSK Trigger: CTTTGACCCCCGATTTCGCCAAGCCTGCACCTCCAT...GGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| 3UTR CAA 72 bp | TGGGCTCTTCCTGTTTCCATGGAATATGTCTTGTCCTaGGTGTCCAGAGCCCTCCAAGAACAAAACCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WALPVSMEYVLS*VSRALQEQNPE Trigger: TTCCGGGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAACAGGAAGAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | TTTCCATGGAATATGTCTTGTCCTTGGTGTCCAGAGCCCTCCAAGAACAAAACCGTCTCTTTTCGCGGCTaGTTCGAAACACGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPWNMSCPWCPEPSKNKTVSFRG*FETRSR Trigger: TCTGGACCGTGTTTCGAACCAGCCGCGAAAAGAGAC...GGTTTTGTTCTTGGAGGGCTCTGGACACCAAGGACAAGACATATTCCATGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAGCAGCATACAAACTAAATACAGACTCCCCTCTAATCCTTTCTCTGTTGGCCAGTGCAGCAAACTaGCCAGCATGTAGAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQAAYKLNTDSPLILSLLASAAN*PACRES Trigger: AGACTCTCTACATGCTGGGCAGTTTGCTGCACTGGC...CAACAGAGAAAGGATTAGAGGGGAGTCTGTATTTAGTTTGTATGCTGCTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR GCA 90 bp | CAGACAGGAAGGTTTGAGGGGAAGGGACCCACTAGAAGAGAAAGAGTTAGATCTGGAATCGATTTCTCATaGATCTGCTCTCCTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTGRFEGKGPTRRERVRSGIDFS*ICSPPF Trigger: AAAGGGAGGAGAGCAGATGCATGAGAAATCGATTCC...AGATCTAACTCTTTCTCTTCTAGTGGGTCCCTTCCCCTCAAACCTTCCTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR TCA 90 bp | ACAAACATAGACTTCTTTCCTAGATACGGACCAGCCGTCGGAGTTCCCCAAATCACGGAAAGACATTCATaGGGAAGATGTCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNIDFFPRYGPAVGVPQITERHS*GRCQSH Trigger: GTGACTTTGACATCTTCCTCATGAATGTCTTTCCGT...GATTTGGGGAACTCCGACGGCTGGTCCGTATCTAGGAAAGAAGTCTATGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAGCAGCATACAAACTAAATACAGACTCCCCTCTAATCCTTTCTCTGTTGGCCCGGAAGAATAACTaGCTGACTTCTCAGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: RQAAYKLNTDSPLILSLLARKNN*LTSQHY Trigger: GTAGTGCTGAGAAGTCAGCCAGTTATTCTTCCGGGC...CAACAGAGAAAGGATTAGAGGGGAGTCTGTATTTAGTTTGTATGCTGCTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CAA 90 bp | TCTCTGCCAGAGATGGTCCAACCGCATCAAGCTGGGCTCTTCCTGTTTCCATGGCCTCCCTTTCCCATGTaGGGGCCAGGGCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPEMVQPHQAGLFLFPWPPFPM*GPGPWL Trigger: CAGCCAGGGCCCTGGCCCCAACATGGGAAAGGGAGG...CCATGGAAACAGGAAGAGCCCAGCTTGATGCGGTTGGACCATCTCTGGCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 90 bp | CCTGGCTGTGCCCGGAAGAATAACTGGCTGACTTCTCAGCACTACTaGTGTGAGGGGTGCCTTTGCACCCGCTCTGATCACAGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGCARKNNWLTSQHY*CEGCLCTRSDHSRA Trigger: TGCTCTGCTGTGATCAGAGCGGGTGCAAAGGCACCCCTCACAGCAGTAGTGCTGAGAAGTCAGCCAGTTATTCTTCCGGGCACAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS CCA 90 bp | TGCTGTGAGGGGTGCCTTTGCACCCGCTCTGATCACAGCAGAGCATaGAGGTGCAGGCTTGGCGAAATCGGGGGTCAAAGAAGGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCEGCLCTRSDHSRA*RCRLGEIGGQRRHR Trigger: TCTATGCCTTCTTTGACCCCCGATTTCGCCAAGCCTGCACCTCCATGCTCTGCTGTGATCAGAGCGGGTGCAAAGGCACCCCTCACAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 90 bp | GGATCTTGGTGCCATTTTCCGAGGCGTCTGTGGAACGGAACACCATaGCAGGCACAGCTAGAAGGGCAGCCAGCACCCATAAGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSWCHFPRRLWNGTP*QAQLEGQPAPIRLL Trigger: CAGCAGTCTTATGGGTGCTGGCTGCCCTTCTAGCTGTGCCTGTCATGGTGTTCCGTTCCACAGACGCCTCGGAAAATGGCACCAAGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 90 bp | CGGAAGAATAACTGGCTGACTTCTCAGCACTACTGCTGTGAGGGGTaGCTTTGCACCCGCTCTGATCACAGCAGAGCATGGAGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKNNWLTSQHYCCEG*LCTRSDHSRAWRCR Trigger: CCTGCACCTCCATGCTCTGCTGTGATCAGAGCGGGTGCAAAGGCACCCCTCACAGCAGTAGTGCTGAGAAGTCAGCCAGTTATTCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 90 bp | AAAGGTCAAGTCAGCCACTGCCAGGCTGGCAATGAAGATGTCAGCTaGGCGTCTCTTTTCGCGGCTGGTTCGAAACACGGTCCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KGQVSHCQAGNEDVS*ASLFAAGSKHGPEH Trigger: GTGCTCTGGACCGTGTTTCGAACCAGCCGCGAAAAGAGACGCTCAGCTGACATCTTCATTGCCAGCCTGGCAGTGGCTGACTTGACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS-3UTR CAA 90 bp | GTGGGGGTGGATCCACAATGGATCTATTCTACCTCCATAGGTCCATTCTTCCCCCATGGAGGTGCAGGCTaGGCGAAATCGGGGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGVDPQWIYSTSIGPFFPHGGAG*AKSGVK Trigger: TTTGACCCCCGATTTCGCCAAGCCTGCACCTCCATG...GGGGAAGAATGGACCTATGGAGGTAGAATAGATCCATTGTGGATCCACCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 90 bp | GCAAAGTCACCACAAAGGTCAAGTCAGCCACTGCCAGGCTGGCAATaGAGATGTCAGCTGAGCGTCTCTTTTCGCGGCTGGTTCGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: AKSPQRSSQPLPGWQ*RCQLSVSFRGWFET Trigger: TGTTTCGAACCAGCCGCGAAAAGAGACGCTCAGCTGACATCTTCATTGCCAGCCTGGCAGTGGCTGACTTGACCTTTGTGGTGACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 90 bp | TGCCTGTGGTGCCTAGAAGAAAAACCAACATGTAGATGGCAGGAATaGGCGCTCCAGAGGGCTTCCAGTCTGCGTAGTCGCATTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: CLWCLEEKPTCRWQE*ALQRASSLRSRIQT Trigger: AGTCTGAATGCGACTACGCAGACTGGAAGCCCTCTGGAGCGCTCATTCCTGCCATCTACATGTTGGTTTTTCTTCTAGGCACCACAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 90 bp | CAACATGTAGATGGCAGGAATGAGCGCTCCAGAGGGCTTCCAGTCTaGGTAGTCGCATTCAGACTGGTTGTCAGCCCCATAGTAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QHVDGRNERSRGLPV*VVAFRLVVSPIVVV Trigger: TACAACTACTATGGGGCTGACAACCAGTCTGAATGCGACTACGCAGACTGGAAGCCCTCTGGAGCGCTCATTCCTGCCATCTACATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 90 bp | TCTTTTCGCGGCTGGTTCGAAACACGGTCCAGAGCACCAGGCCATTaGCTGTGGTGCCTAGAAGAAAAACCAACATGTAGATGGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFRGWFETRSRAPGH*LWCLEEKPTCRWQE Trigger: TTCCTGCCATCTACATGTTGGTTTTTCTTCTAGGCACCACAGGCAATGGCCTGGTGCTCTGGACCGTGTTTCGAACCAGCCGCGAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 72 bp | GCCAGGGCCCTGGCTGTGCCCGGAAGAATAACTGGCTaGCTTCTCAGCACTACTGCTGTGAGGGGTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARALAVPGRITG*LLSTTAVRGAF Trigger: AAAGGCACCCCTCACAGCAGTAGTGCTGAGAAGTCAGCCAGTTATTCTTCCGGGCACAGCCAGGGCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS CCA 72 bp | GGGTGCCTTTGCACCCGCTCTGATCACAGCAGAGCATaGAGGTGCAGGCTTGGCGAAATCGGGGGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCLCTRSDHSRA*RCRLGEIGGQR Trigger: TCTTTGACCCCCGATTTCGCCAAGCCTGCACCTCCATGCTCTGCTGTGATCAGAGCGGGTGCAAAGGCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 72 bp | GTCAGCCACTGCCAGGCTGGCAATGAAGATGTCAGCTaGGCGTCTCTTTTCGCGGCTGGTTCGAAACACGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSHCQAGNEDVS*ASLFAAGSKHG Trigger: ACCGTGTTTCGAACCAGCCGCGAAAAGAGACGCTCAGCTGACATCTTCATTGCCAGCCTGGCAGTGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 72 bp | CCACAAAGGTCAAGTCAGCCACTGCCAGGCTGGCAATaGAGATGTCAGCTGAGCGTCTCTTTTCGCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PQRSSQPLPGWQ*RCQLSVSFRGW Trigger: CCAGCCGCGAAAAGAGACGCTCAGCTGACATCTTCATTGCCAGCCTGGCAGTGGCTGACTTGACCTTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 72 bp | TGCCATTTTCCGAGGCGTCTGTGGAACGGAACACCATaGCAGGCACAGCTAGAAGGGCAGCCAGCACCCATA | + |
|
Preference number: 6 (lower is better) Translates to: CHFPRRLWNGTP*QAQLEGQPAPI Trigger: TATGGGTGCTGGCTGCCCTTCTAGCTGTGCCTGTCATGGTGTTCCGTTCCACAGACGCCTCGGAAAATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 72 bp | GATGGCAGGAATGAGCGCTCCAGAGGGCTTCCAGTCTaGGTAGTCGCATTCAGACTGGTTGTCAGCCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: DGRNERSRGLPV*VVAFRLVVSPI Trigger: TATGGGGCTGACAACCAGTCTGAATGCGACTACGCAGACTGGAAGCCCTCTGGAGCGCTCATTCCTGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 72 bp | GCCCGGAAGAATAACTGGCTGACTTCTCAGCACTACTaGTGTGAGGGGTGCCTTTGCACCCGCTCTGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARKNNWLTSQHY*CEGCLCTRSDH Trigger: GTGATCAGAGCGGGTGCAAAGGCACCCCTCACAGCAGTAGTGCTGAGAAGTCAGCCAGTTATTCTTCCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS CAA 72 bp | TCTCCCAGAAGCCTCCTGCAGCTCGAACTGGCTGCTTaGAGAATGGCTGATGCAGGTGCAGTACGGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPRSLLQLELAA*RMADAGAVRKD Trigger: GTCTTTCCGTACTGCACCTGCATCAGCCATTCTCAAAGCAGCCAGTTCGAGCTGCAGGAGGCTTCTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184728.2 |
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| CDS CAA 90 bp | CCGCAGGCCCTCAATGCGCTCCTTTCGGAAATGGCCAGCGATGGTTaGGGCAATGAAGAAGTAACATGTCAGCATGATGGTGAAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PQALNALLSEMASDG*GNEEVTCQHDGEGH Trigger: GTGCCCTTCACCATCATGCTGACATGTTACTTCTTCATTGCCCAAACCATCGCTGGCCATTTCCGAAAGGAGCGCATTGAGGGCCTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS TCA 72 bp | TGCCTAGAAGAAAAACCAACATGTAGATGGCAGGAATaGGCGCTCCAGAGGGCTTCCAGTCTGCGTAGTCGC | + |
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Preference number: 6 (lower is better) Translates to: CLEEKPTCRWQE*ALQRASSLRSR Trigger: GCGACTACGCAGACTGGAAGCCCTCTGGAGCGCTCATTCCTGCCATCTACATGTTGGTTTTTCTTCTAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS GCA 72 bp | GGCTGGTTCGAAACACGGTCCAGAGCACCAGGCCATTaGCTGTGGTGCCTAGAAGAAAAACCAACATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GWFETRSRAPGH*LWCLEEKPTCR Trigger: TCTACATGTTGGTTTTTCTTCTAGGCACCACAGGCAATGGCCTGGTGCTCTGGACCGTGTTTCGAACCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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| CDS CAA 90 bp | AGTTTGTTGTCTCCCAGAAGCCTCCTGCAGCTCGAACTGGCTGCTTaGAGAATGGCTGATGCAGGTGCAGTACGGAAAGACATTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: SLLSPRSLLQLELAA*RMADAGAVRKDIHE Trigger: CTCATGAATGTCTTTCCGTACTGCACCTGCATCAGCCATTCTCAAAGCAGCCAGTTCGAGCTGCAGGAGGCTTCTGGGAGACAACAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184728.2 |
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| CDS GCA 72 bp | GAAACACGGTCCAGAGCACCAGGCCATTGCCTGTGGTaGCTAGAAGAAAAACCAACATGTAGATGGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: ETRSRAPGHCLW*LEEKPTCRWQE Trigger: TTCCTGCCATCTACATGTTGGTTTTTCTTCTAGGCACCACAGGCAATGGCCTGGTGCTCTGGACCGTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057019.9 |
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