Pregenerated sensors for APLF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030051Ensembl transcript IDs: ENSMUST00000032130.8, ENSMUST00000065997.5, ENSMUST00000203209.3
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGAACCCTGGGCCTCTCACTCCTTTTATACTCTCTCTCATCCATaGACCGCAGGCCACGCCCCCTCGCCAGTCACGAGGCTTCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: PEPWASHSFYTLSHP*TAGHAPSPVTRLQL Trigger: TAGCTGAAGCCTCGTGACTGGCGAGGGGGCGTGGCCTGCGGTGCATGGATGAGAGAGAGTATAAAAGGAGTGAGAGGCCCAGGGTTCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR TCA 90 bp | GTTGGCCCCATACATGCAGGCCGTCCTCCGGACCTTGCTTTCTTCTaGACAGCCCAGCACTGGGTCAGCTGTGTCTGTGTGCAAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: VGPIHAGRPPDLAFF*TAQHWVSCVCVQSI Trigger: GATGCTTTGCACACAGACACAGCTGACCCAGTGCTGGGCTGTTCAGAAGAAAGCAAGGTCCGGAGGACGGCCTGCATGTATGGGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR GCA 90 bp | GTTGAAAGTGGAGGGGGTTCCTCCTGTAGCAGTTGGCCCCATACATaGAGGCCGTCCTCCGGACCTTGCTTTCTTCTGAACAGCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VESGGGSSCSSWPHT*RPSSGPCFLLNSPA Trigger: TGCTGGGCTGTTCAGAAGAAAGCAAGGTCCGGAGGACGGCCTGCATGTATGGGGCCAACTGCTACAGGAGGAACCCCCTCCACTTTCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 90 bp | CCACAGCAGAGAACGCACCTCTCAGGTGACCCTCTGAGAAGACAGTaGCTTGAAGCTTCTCGTGTCCTCAGTGTAAAGGTGCACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PQQRTHLSGDPLRRQ*LEASRVLSVKVHRA Trigger: TGCTCTGTGCACCTTTACACTGAGGACACGAGAAGCTTCAAGCCACTGTCTTCTCAGAGGGTCACCTGAGAGGTGCGTTCTCTGCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR CCA 90 bp | CACTGGGTTGCCCGACATCATCGTCATCTTCATCCAGAGCAACTCTaGCTGGAAGTGCACTGTGCCTATATTCCATCTTGTGCTGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: HWVARHHRHLHPEQL*LEVHCAYIPSCAGG Trigger: ACCCCCAGCACAAGATGGAATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATGTCGGGCAACCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 90 bp | CTTAGACTTTCCGCCAACATCCAAGCTGGGAGGATTCTTTTCCTCTaGGTAGGACGTGGCTGGTGCTCACTGAAAGCTCTGCATTCACCT | + |
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Preference number: 1 (lower is better) Translates to: LRLSANIQAGRILFL*VGRGWCSLKALHSP Trigger: AGGTGAATGCAGAGCTTTCAGTGAGCACCAGCCACGTCCTACCCAGAGGAAAAGAATCCTCCCAGCTTGGATGTTGGCGGAAAGTCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 90 bp | GGGTTGCCCGACATCATCGTCATCTTCATCCAGAGCAACTCTGGCTaGAAGTGCACTGTGCCTATATTCCATCTTGTGCTGGGGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: GLPDIIVIFIQSNSG*KCTVPIFHLVLGVL Trigger: AAGAACCCCCAGCACAAGATGGAATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATGTCGGGCAACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR TCA 90 bp | CTGGGTAGGACGTGGCTGGTGCTCACTGAAAGCTCTGCATTCACCTaGAGAGGACATAGGATCTATGGTGGGACACTTGGTCTTGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: LGRTWLVLTESSAFT*RGHRIYGGTLGLGY Trigger: ATAACCAAGACCAAGTGTCCCACCATAGATCCTATGTCCTCTTCAGGTGAATGCAGAGCTTTCAGTGAGCACCAGCCACGTCCTACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR GCA 90 bp | CCCGACATCATCGTCATCTTCATCCAGAGCAACTCTGGCTGGAAGTaGACTGTGCCTATATTCCATCTTGTGCTGGGGGTTCTTCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: PDIIVIFIQSNSGWK*TVPIFHLVLGVLPV Trigger: TACAGGAAGAACCCCCAGCACAAGATGGAATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATGTCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR TCA 90 bp | AGCAGAGCTAGACTCAGGATGGCATCCTTGAGATTTCTCAGGAGGTaGCTTGCTTTGGACACGTGCACAACTCTCGCCCTCTTCATTTGT | + |
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Preference number: 1 (lower is better) Translates to: SRARLRMASLRFLRR*LALDTCTTLALFIC Trigger: ACAAATGAAGAGGGCGAGAGTTGTGCACGTGTCCAAAGCAAGTCACCTCCTGAGAAATCTCAAGGATGCCATCCTGAGTCTAGCTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 90 bp | GAGGCTTCAGCTAATCAGGGCAGCAGGGGCAAATCTCCACCAAATTaGATTCACCTGTATCCTGGTACACCTAAGCAGCACTCAAGATGT | + |
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Preference number: 1 (lower is better) Translates to: EASANQGSRGKSPPN*IHLYPGTPKQHSRC Trigger: ACATCTTGAGTGCTGCTTAGGTGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCCCCTGCTGCCCTGATTAGCTGAAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR GCA 90 bp | GGATCTATGGTGGGACACTTGGTCTTGGTTATTTCAGGGCTTCCTTaGAGCTGTGAGGCACCAGTTGTCTTATCAGGTAAGTTAACCACA | + |
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Preference number: 1 (lower is better) Translates to: GSMVGHLVLVISGLP*SCEAPVVLSGKLTT Trigger: TGTGGTTAACTTACCTGATAAGACAACTGGTGCCTCACAGCTGCAAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCACCATAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR GCA 90 bp | GAACATTCTCAGAAGAAACACCCGGTCCTTCTTGGTCAGCCTTTCTaGACTTCTTCCCAGGGTCTTGTTCCGCTGACACACTTTTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: EHSQKKHPVLLGQPF*TSSQGLVPLTHFLN Trigger: ATTCAAAAAGTGTGTCAGCGGAACAAGACCCTGGGAAGAAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGTTTCTTCTGAGAATGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 90 bp | CGCAGTCGTCTTCTTTATACTCTCACAGATATACATACGCAGTTGTaGATGCACAAAAACCATTTCCTTGCAAGGCGAGTACTGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: RSRLLYTLTDIHTQL*MHKNHFLARRVLLP Trigger: GGGCAGCAGTACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGTATGTATATCTGTGAGAGTATAAAGAAGACGACTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR GCA 90 bp | GTCGTCTTCTTTATACTCTCACAGATATACATACGCAGTTGTGGATaGACAAAAACCATTTCCTTGCAAGGCGAGTACTGCTGCCCTATA | + |
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Preference number: 1 (lower is better) Translates to: VVFFILSQIYIRSCG*TKTISLQGEYCCPI Trigger: TATAGGGCAGCAGTACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGTATGTATATCTGTGAGAGTATAAAGAAGACGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR GCA 90 bp | CTCATAAACCTTTTTGCTTCTTTCAAAAGCTCATCCACATCTTCCTaGTCCTCATCGTCCTTTCCTGGGTGCCAATCAGAATCTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: LINLFASFKSSSTSS*SSSSFPGCQSESSS Trigger: AGATGAAGATTCTGATTGGCACCCAGGAAAGGACGATGAGGAGCAGGAAGATGTGGATGAGCTTTTGAAAGAAGCAAAAAGGTTTATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | GCCACACCCGCTCCCCACACTGCTTCACGAGCTGATGTACCCCAATCTGCAGACTGCTCAGAGGGAAGCTaGCCTAAAACCAGACATGCT | + |
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Preference number: 2 (lower is better) Translates to: ATPAPHTASRADVPQSADCSEGS*PKTRHA Trigger: AGCATGTCTGGTTTTAGGCCAGCTTCCCTCTGAGCA...GTCTGCAGATTGGGGTACATCAGCTCGTGAAGCAGTGTGGGGAGCGGGTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR CAA 90 bp | GACTGCTCAGAGGGAAGCTGGCCTAAAACCAGACATGCTCCATCCTaGGAGCAGAGGCTTCTTCAGAGGCCAGAACCCTATCCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: DCSEGSWPKTRHAPS*EQRLLQRPEPYPQQ Trigger: CTGCTGTGGATAGGGTTCTGGCCTCTGAAGAAGCCTCTGCTCCAAGGATGGAGCATGTCTGGTTTTAGGCCAGCTTCCCTCTGAGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR-3UTR CCA 90 bp | GCCACACCCGCTCCCCACACTGCTTCACGAGCTGATGTACCCCAATCTGCAGACTCAAGTCTAGCTTTGTaGGGCCTCTTTCAACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ATPAPHTASRADVPQSADSSLAL*GLFQQQ Trigger: CTGCTGTTGAAAGAGGCCCCACAAAGCTAGACTTGA...GTCTGCAGATTGGGGTACATCAGCTCGTGAAGCAGTGTGGGGAGCGGGTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGACTTGCTTTGGACACGTGCACAACTCTCGCCCTCTTCATTTGTGGTTGCCCCCTCAGCTGGTGTaGAGAGGCTCTGGTCACTTA | + |
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Preference number: 2 (lower is better) Translates to: EVTCFGHVHNSRPLHLWLPPQLV*RGSGHL Trigger: TAAGTGACCAGAGCCTCTCCACACCAGCTGAGGGGG...CAACCACAAATGAAGAGGGCGAGAGTTGTGCACGTGTCCAAAGCAAGTCACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR GCA 90 bp | GGACACTCGGGCCTGTCACCAATCACACCTTCATCTGTGCCATGTACCTCTCCACTTGGTCAGCCTTTCTaGACTTCTTCCCAGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GHSGLSPITPSSVPCTSPLGQPF*TSSQGL Trigger: AAGACCCTGGGAAGAAGTGCAGAAAGGCTGACCAAG...TGGAGAGGTACATGGCACAGATGAAGGTGTGATTGGTGACAGGCCCGAGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCTTCCTCGTCCTCATCGTCACTGGGTTGCCCGACATCATCGTCATCTTCAGGATTCTTTTCCTCTaGGTAGGACGTGGCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: IVFLVLIVTGLPDIIVIFRILFL*VGRGWC Trigger: GCACCAGCCACGTCCTACCCAGAGGAAAAGAATCCT...GAAGATGACGATGATGTCGGGCAACCCAGTGACGATGAGGACGAGGAAGACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | GGACACTCGGGCCTGTCACCAATCACACCTTCATCTGTGCCATGTACCTCTCCAGCTTTTCCACTCCTCTaGATGACATCCTTATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GHSGLSPITPSSVPCTSPAFPLL*MTSLSP Trigger: GGGAGATAAGGATGTCATCCAGAGGAGTGGAAAAGC...TGGAGAGGTACATGGCACAGATGAAGGTGTGATTGGTGACAGGCCCGAGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR GCA 90 bp | GATTCTTTTCCTCTGGGTAGGACGTGGCTGGTGCTCACTGAAAGCTCTGCATTCATTTCAGGGCTTCCTTaGAGCTGTGAGGCACCAGTT | + |
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Preference number: 2 (lower is better) Translates to: DSFPLGRTWLVLTESSAFISGLP*SCEAPV Trigger: AACTGGTGCCTCACAGCTGCAAGGAAGCCCTGAAAT...GAATGCAGAGCTTTCAGTGAGCACCAGCCACGTCCTACCCAGAGGAAAAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR TCA 90 bp | CATCATCGTCATCTTCATCCAGAGCAACTCTGGCTGGAAGTGCACTGTGCCTATCTTTTTCCCATGCCATaGTGTGTTTCCTGGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: HHRHLHPEQLWLEVHCAYLFPMP*CVSWGS Trigger: AGAACCCCAGGAAACACATCATGGCATGGGAAAAAG...ATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGACTTGCTTTGGACACGTGCACAACTCTCGCCCTCTTCATTTGTGGTTGTGGGACACTTGGTCTTaGTTATTTCAGGGCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: EVTCFGHVHNSRPLHLWLWDTWS*LFQGFL Trigger: AAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCA...CAACCACAAATGAAGAGGGCGAGAGTTGTGCACGTGTCCAAAGCAAGTCACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CAA 90 bp | GCCACATCTAATATATTAGAGACGTGGCACACTGCTGGCTGTCATTaGTTCAAGTCTAGCTTTGTGGGGCCTCTTTCAACAGCAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ATSNILETWHTAGCH*FKSSFVGPLSTAVW Trigger: CCACACTGCTGTTGAAAGAGGCCCCACAAAGCTAGACTTGAACAAATGACAGCCAGCAGTGTGCCACGTCTCTAATATATTAGATGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR CAA 90 bp | CTTTGGACACGTGCACAACTCTCGCCCTCTTCATTTGTGGTTGGTTaGGTGGCGGCTTTATGTTTAGAGACCTCACCAAGTTCCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: LWTRAQLSPSSFVVG*VAALCLETSPSSSI Trigger: AATAGAGGAACTTGGTGAGGTCTCTAAACATAAAGCCGCCACCAAACCAACCACAAATGAAGAGGGCGAGAGTTGTGCACGTGTCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | TCATCGTCATCTTCATCCAGAGCAACTCTGGCTGGAAGTGCACTGTGCCTATATCTATGGTGGGACACTTaGTCTTGGTTATTTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSSSSSRATLAGSALCLYLWWDT*SWLFQG Trigger: GCCCTGAAATAACCAAGACCAAGTGTCCCACCATAG...ATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CAA 90 bp | CTCCGCAGTCGTCTTCTTTATACTCTCACAGATATACATACGCAGTaGTGGATGCACAAAAACCATTTCCTTGCAAGGCGAGTACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LRSRLLYTLTDIHTQ*WMHKNHFLARRVLL Trigger: CAGCAGTACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGTATGTATATCTGTGAGAGTATAAAGAAGACGACTGCGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGTCATTGCAGAAACGCTACTTTTTCCTTCTCATAAACCTTTTTGCTTCTGTGGCTGGTGCTCACTaGAAGCTCTGCATTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: CESLQKRYFFLLINLFASVAGAH*KLCIHL Trigger: CAGGTGAATGCAGAGCTTTCAGTGAGCACCAGCCAC...AGAAGCAAAAAGGTTTATGAGAAGGAAAAAGTAGCGTTTCTGCAATGACTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | CATCATCGTCATCTTCATCCAGAGCAACTCTGGCTGGAAGTGCACTGTGCCTATTATTTCACTGAAGGCTaGTGTTTCAATGTTTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: HHRHLHPEQLWLEVHCAYYFTEG*CFNVSS Trigger: ACTTGAAACATTGAAACACCAGCCTTCAGTGAAATA...ATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTCTTCCACTTTTCTGTAATCACCTGGCTAAGCTTGCAGGGAGCTCTATATATTTCACTGAAGGCTaGTGTTTCAATGTTTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: CALPLFCNHLAKLAGSSIYFTEG*CFNVSS Trigger: ACTTGAAACATTGAAACACCAGCCTTCAGTGAAATA...TATAGAGCTCCCTGCAAGCTTAGCCAGGTGATTACAGAAAAGTGGAAGAGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR TCA 72 bp | ATGGTGTGGGCGGGGCATGGTGTGTGCAGGGCGGTGTaGGAGCCACACAAGGGCTCCGCAGTCGTCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: MVWAGHGVCRAV*EPHKGSAVVFF Trigger: AAAGAAGACGACTGCGGAGCCCTTGTGTGGCTCTCACACCGCCCTGCACACACCATGCCCCGCCCACACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR TCA 72 bp | TGCCGCCACACCCGCTCCCCACACTGCTTCACGAGCTaGTGTACCCCAATCTGCAGACTGCTCAGAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: CRHTRSPHCFTS*CTPICRLLRGK Trigger: CTTCCCTCTGAGCAGTCTGCAGATTGGGGTACATCAGCTCGTGAAGCAGTGTGGGGAGCGGGTGTGGCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR GCA 72 bp | TGGGCCTCTCACTCCTTTTATACTCTCTCTCATCCATaGACCGCAGGCCACGCCCCCTCGCCAGTCACGAGG | + |
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Preference number: 3 (lower is better) Translates to: WASHSFYTLSHP*TAGHAPSPVTR Trigger: CCTCGTGACTGGCGAGGGGGCGTGGCCTGCGGTGCATGGATGAGAGAGAGTATAAAAGGAGTGAGAGGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR GCA 72 bp | GGAGGGGGTTCCTCCTGTAGCAGTTGGCCCCATACATaGAGGCCGTCCTCCGGACCTTGCTTTCTTCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: GGGSSCSSWPHT*RPSSGPCFLLN Trigger: GTTCAGAAGAAAGCAAGGTCCGGAGGACGGCCTGCATGTATGGGGCCAACTGCTACAGGAGGAACCCCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 72 bp | AGTGTTGAAAGTGGAGGGGGTTCCTCCTGTAGCAGTTaGCCCCATACATGCAGGCCGTCCTCCGGACCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SVESGGGSSCSS*PHTCRPSSGPC Trigger: GCAAGGTCCGGAGGACGGCCTGCATGTATGGGGCCAACTGCTACAGGAGGAACCCCCTCCACTTTCAACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CAA 90 bp | GGCGCCTTTGGGACTGCCGCCACACCCGCTCCCCACACTGCTTCACGAGCTGATCAGAAGATCAAAGGTTaGTACAACCTATGGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: GAFGTAATPAPHTASRADQKIKG*YNLWLF Trigger: AAAAAGCCATAGGTTGTACAAACCTTTGATCTTCTG...ATCAGCTCGTGAAGCAGTGTGGGGAGCGGGTGTGGCGGCAGTCCCAAAGGCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR TCA 72 bp | CATGTACCTCTCCATAGTCACTGTCACCAGGGTGGCTaGAGTGTTGAAAGTGGAGGGGGTTCCTCCTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: HVPLHSHCHQGG*SVESGGGSSCS Trigger: GCTACAGGAGGAACCCCCTCCACTTTCAACACTTCAGCCACCCTGGTGACAGTGACTATGGAGAGGTACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR GCA 72 bp | CAGAAGAAACACCCGGTCCTTCTTGGTCAGCCTTTCTaGACTTCTTCCCAGGGTCTTGTTCCGCTGACACAC | + |
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Preference number: 3 (lower is better) Translates to: QKKHPVLLGQPF*TSSQGLVPLTH Trigger: GTGTGTCAGCGGAACAAGACCCTGGGAAGAAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGTTTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR GCA 72 bp | GACACTCGGGCCTGTCACCAATCACACCTTCATCTGTaGCATGTACCTCTCCATAGTCACTGTCACCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: DTRACHQSHLHL*HVPLHSHCHQG Trigger: ACCCTGGTGACAGTGACTATGGAGAGGTACATGGCACAGATGAAGGTGTGATTGGTGACAGGCCCGAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 72 bp | GATGTACCCCAATCTGCAGACTGCTCAGAGGGAAGCTaGCCTAAAACCAGACATGCTCCATCCTTGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DVPQSADCSEGS*PKTRHAPSLEQ Trigger: CTGCTCCAAGGATGGAGCATGTCTGGTTTTAGGCCAGCTTCCCTCTGAGCAGTCTGCAGATTGGGGTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR TCA 72 bp | AGACTCAGGATGGCATCCTTGAGATTTCTCAGGAGGTaGCTTGCTTTGGACACGTGCACAACTCTCGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RLRMASLRFLRR*LALDTCTTLAL Trigger: GAGGGCGAGAGTTGTGCACGTGTCCAAAGCAAGTCACCTCCTGAGAAATCTCAAGGATGCCATCCTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR CCA 72 bp | AGAACGCACCTCTCAGGTGACCCTCTGAGAAGACAGTaGCTTGAAGCTTCTCGTGTCCTCAGTGTAAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RTHLSGDPLRRQ*LEASRVLSVKV Trigger: CACCTTTACACTGAGGACACGAGAAGCTTCAAGCCACTGTCTTCTCAGAGGGTCACCTGAGAGGTGCGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
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| 3UTR-3UTR CAA 90 bp | GTGCCAATCAGAATCTTCATCTGTCGGCTCATAGTCTTCCTCGTCCTCATCGTCAACACCCGGTCCTTCTaGGTCAGCCTTTCTGCACTT | + |
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Preference number: 3 (lower is better) Translates to: VPIRIFICRLIVFLVLIVNTRSF*VSLSAL Trigger: AAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGTT...GACGATGAGGACGAGGAAGACTATGAGCCGACAGATGAAGATTCTGATTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCTTCCTCGTCCTCATCGTCACTGGGTTGCCCGACATCATCGTCATCTTCTGCCTATATTCCATCTaGTGCTGGGGGTTCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: IVFLVLIVTGLPDIIVIFCLYSI*CWGFFL Trigger: CAGGAAGAACCCCCAGCACAAGATGGAATATAGGCA...GAAGATGACGATGATGTCGGGCAACCCAGTGACGATGAGGACGAGGAAGACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| 3UTR TCA 72 bp | ACGTGGCTGGTGCTCACTGAAAGCTCTGCATTCACCTaGAGAGGACATAGGATCTATGGTGGGACACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TWLVLTESSAFT*RGHRIYGGTLG Trigger: ACCAAGTGTCCCACCATAGATCCTATGTCCTCTTCAGGTGAATGCAGAGCTTTCAGTGAGCACCAGCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR GCA 72 bp | CAGGATGGCATCCTTGAGATTTCTCAGGAGGTGACTTaGTTTGGACACGTGCACAACTCTCGCCCTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QDGILEISQEVT*FGHVHNSRPLH Trigger: ATGAAGAGGGCGAGAGTTGTGCACGTGTCCAAAGCAAGTCACCTCCTGAGAAATCTCAAGGATGCCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR CCA 72 bp | GCTAATCAGGGCAGCAGGGGCAAATCTCCACCAAATTaGATTCACCTGTATCCTGGTACACCTAAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ANQGSRGKSPPN*IHLYPGTPKQH Trigger: GTGCTGCTTAGGTGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCCCCTGCTGCCCTGATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR GCA 72 bp | GTGGGACACTTGGTCTTGGTTATTTCAGGGCTTCCTTaGAGCTGTGAGGCACCAGTTGTCTTATCAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VGHLVLVISGLP*SCEAPVVLSGK Trigger: CTTACCTGATAAGACAACTGGTGCCTCACAGCTGCAAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR GCA 72 bp | ATCGTCATCTTCATCCAGAGCAACTCTGGCTGGAAGTaGACTGTGCCTATATTCCATCTTGTGCTGGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IVIFIQSNSGWK*TVPIFHLVLGV Trigger: AACCCCCAGCACAAGATGGAATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR CCA 72 bp | GCCCGACATCATCGTCATCTTCATCCAGAGCAACTCTaGCTGGAAGTGCACTGTGCCTATATTCCATCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ARHHRHLHPEQL*LEVHCAYIPSC Trigger: ACAAGATGGAATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATGTCGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR CCA 72 bp | GACATCATCGTCATCTTCATCCAGAGCAACTCTGGCTaGAAGTGCACTGTGCCTATATTCCATCTTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DIIVIFIQSNSG*KCTVPIFHLVL Trigger: CAGCACAAGATGGAATATAGGCACAGTGCACTTCCAGCCAGAGTTGCTCTGGATGAAGATGACGATGATGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGAGTACTGCTGCCCTATAGGTTAACAGGATCATTTTCAGCACCTATTTGTAACAGCAGTGTGGGGTaGTGCTCTTCCACTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRVLLPYRLTGSFSAPICNSSVG*CSSTFL Trigger: CAGAAAAGTGGAAGAGCACAACCCCACACTGCTGTT...ACAAATAGGTGCTGAAAATGATCCTGTTAACCTATAGGGCAGCAGTACTCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR TCA 72 bp | ACTCAAGATGTTTGTGTCTTATATGAGGAAGTCAGGTaGAAGTCATATGACTTAGCTGCAGTCCCTGGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQDVCVLYEEVR*KSYDLAAVPGA Trigger: GGCGCCAGGGACTGCAGCTAAGTCATATGACTTTCACCTGACTTCCTCATATAAGACACAAACATCTTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR GCA 72 bp | TTTGAATTTCCTGATGGACTAAGCCGCTTTTTCCCATaGCATGATGTGTTTCCTGGGGTTCTATCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FEFPDGLSRFFP*HDVFPGVLSSQ Trigger: CTGTGAAGATAGAACCCCAGGAAACACATCATGGCATGGGAAAAAGCGGCTTAGTCCATCAGGAAATTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR GCA 72 bp | TTTATACTCTCACAGATATACATACGCAGTTGTGGATaGACAAAAACCATTTCCTTGCAAGGCGAGTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: FILSQIYIRSCG*TKTISLQGEYC Trigger: GCAGTACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGTATGTATATCTGTGAGAGTATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR CCA 72 bp | CTTCTTTATACTCTCACAGATATACATACGCAGTTGTaGATGCACAAAAACCATTTCCTTGCAAGGCGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLYTLTDIHTQL*MHKNHFLARRV Trigger: TACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGTATGTATATCTGTGAGAGTATAAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR CAA 72 bp | CAGTTGGCCCCATACATGCAGGCCGTCCTCCGGACCTaGCTTTCTTCTGAACAGCCCAGCACTGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLAPYMQAVLRT*LSSEQPSTGSA Trigger: AGCTGACCCAGTGCTGGGCTGTTCAGAAGAAAGCAAGGTCCGGAGGACGGCCTGCATGTATGGGGCCAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR CAA 72 bp | CTCTCCATAGTCACTGTCACCAGGGTGGCTGAAGTGTaGAAAGTGGAGGGGGTTCCTCCTGTAGCAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSIVTVTRVAEV*KVEGVPPVAVG Trigger: GCCAACTGCTACAGGAGGAACCCCCTCCACTTTCAACACTTCAGCCACCCTGGTGACAGTGACTATGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR CAA 72 bp | GAGGGAAGCTGGCCTAAAACCAGACATGCTCCATCCTaGGAGCAGAGGCTTCTTCAGAGGCCAGAACCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSWPKTRHAPS*EQRLLQRPEPY Trigger: ATAGGGTTCTGGCCTCTGAAGAAGCCTCTGCTCCAAGGATGGAGCATGTCTGGTTTTAGGCCAGCTTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR CAA 72 bp | CGGCTCATAGTCTTCCTCGTCCTCATCGTCACTGGGTaGCCCGACATCATCGTCATCTTCATCCAGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLIVFLVLIVTG*PDIIVIFIQSN Trigger: GTTGCTCTGGATGAAGATGACGATGATGTCGGGCAACCCAGTGACGATGAGGACGAGGAAGACTATGAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS-3UTR CCA 90 bp | GCCACACCCGCTCCCCACACTGCTTCACGAGCTGATGTACCCCAATCTGCAGACTGGATTCCTATGGATTaGCTTGATTCGAAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ATPAPHTASRADVPQSADWIPMD*LDSKLT Trigger: AGTCAGCTTCGAATCAAGCCAATCCATAGGAATCCA...GTCTGCAGATTGGGGTACATCAGCTCGTGAAGCAGTGTGGGGAGCGGGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCACACAAGGGCTCCGCAGTCGTCTTCTTTATACTCTCACAGATATACATCCCCGGGATGCAACTaGCTCCACACTTGCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESHTRAPQSSSLYSHRYTSPGCN*LHTCVS Trigger: GGAGACGCAAGTGTGGAGCCAGTTGCATCCCGGGGA...TGTATATCTGTGAGAGTATAAAGAAGACGACTGCGGAGCCCTTGTGTGGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGCTTCTTCAGAGGCCAGAACCCTATCCACAGCAGAGAACGCACCTCTCCTCCACTTCAGATTCTaGAGAGAAAACACGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AEASSEARTLSTAENAPLLHFRF*RENTES Trigger: GCTTTCCGTGTTTTCTCTGCAGAATCTGAAGTGGAG...GAGAGGTGCGTTCTCTGCTGTGGATAGGGTTCTGGCCTCTGAAGAAGCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | ACGCAGTTGTGGATGCACAAAAACCATTTCCTTGCAAGGCGAGTACTGCTGCCCCTTGGTCAGCCTTTCTaGACTTCTTCCCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQLWMHKNHFLARRVLLPLGQPF*TSSQGL Trigger: AAGACCCTGGGAAGAAGTGCAGAAAGGCTGACCAAG...GGGCAGCAGTACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACTCCCCGGGATGCAACTaGCTCCACACTTGCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTAQPLYLLSLMDTLNRHSPGCN*LHTCVS Trigger: GGAGACGCAAGTGTGGAGCCAGTTGCATCCCGGGGA...GTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCACACAAGGGCTCCGCAGTCGTCTTCTTTATACTCTCACAGATATACAACACCCGGTCCTTCTTaGTCAGCCTTTCTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESHTRAPQSSSLYSHRYTTPGPS*SAFLHF Trigger: GAAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGT...TGTATATCTGTGAGAGTATAAAGAAGACGACTGCGGAGCCCTTGTGTGGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| 3UTR CAA 72 bp | GAAGAGGACATAGGATCTATGGTGGGACACTTGGTCTaGGTTATTTCAGGGCTTCCTTGCAGCTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEDIGSMVGHLV*VISGLPCSCEA Trigger: TGCCTCACAGCTGCAAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCACCATAGATCCTATGTCCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| 3UTR CAA 72 bp | TTCTGGAACATTCTCAGAAGAAACACCCGGTCCTTCTaGGTCAGCCTTTCTGCACTTCTTCCCAGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FWNILRRNTRSF*VSLSALLPRVL Trigger: CAAGACCCTGGGAAGAAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGTTTCTTCTGAGAATGTTCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS-3UTR TCA 90 bp | CAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACGTGGCTGGTGCTCACTaGAAGCTCTGCATTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTAQPLYLLSLMDTLNRHVAGAH*KLCIHL Trigger: CAGGTGAATGCAGAGCTTTCAGTGAGCACCAGCCAC...GTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| 3UTR CAA 72 bp | TCACCTGAAGAGGACATAGGATCTATGGTGGGACACTaGGTCTTGGTTATTTCAGGGCTTCCTTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPEEDIGSMVGH*VLVISGLPCSC Trigger: ACAGCTGCAAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCACCATAGATCCTATGTCCTCTTCAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS-3UTR CCA 90 bp | TGTCATTTGTTCAAGTCTAGCTTTGTGGGGCCTCTTTCAACAGCAGTGTGGGGTCTATGGTGGGACACTTaGTCTTGGTTATTTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLFKSSFVGPLSTAVWGLWWDT*SWLFQG Trigger: GCCCTGAAATAACCAAGACCAAGTGTCCCACCATAG...ACCCCACACTGCTGTTGAAAGAGGCCCCACAAAGCTAGACTTGAACAAATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | TATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGTCCTCCTGTAGCAGTTaGCCCCATACATGCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YQTAQPLYLLSLMDTLNRSSCSS*PHTCRP Trigger: CGGCCTGCATGTATGGGGCCAACTGCTACAGGAGGA...CCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | CAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACAGATTTCTCAGGAGGTaGCTTGCTTTGGACACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTAQPLYLLSLMDTLNRHRFLRR*LALDTC Trigger: GCACGTGTCCAAAGCAAGTCACCTCCTGAGAAATCT...GTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTGTTCAAGTCTAGCTTTGTGGGGCCTCTTTCAACAGCAGTGTGGGGTTCACACCTTCATCTGTaGCATGTACCTCTCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLFKSSFVGPLSTAVWGSHLHL*HVPLHS Trigger: ACTATGGAGAGGTACATGGCACAGATGAAGGTGTGA...ACCCCACACTGCTGTTGAAAGAGGCCCCACAAAGCTAGACTTGAACAAATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | CAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCCCCCTCAGCTGGTGTaGAGAGGCTCTGGTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPLYLLSLMDTLNRHQNRPPQLV*RGSGHL Trigger: TAAGTGACCAGAGCCTCTCCACACCAGCTGAGGGGG...CCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATCCCCCTCAGCTGGTGTaGAGAGGCTCTGGTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: VFRKYQTAQPLYLLSLMDPPQLV*RGSGHL Trigger: TAAGTGACCAGAGCCTCTCCACACCAGCTGAGGGGG...ATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | TGTGCTCTTCCACTTTTCTGTAATCACCTGGCTAAGCTTGCAGGGAGCTCTATAGCTTTTCCACTCCTCTaGATGACATCCTTATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CALPLFCNHLAKLAGSSIAFPLL*MTSLSP Trigger: GGGAGATAAGGATGTCATCCAGAGGAGTGGAAAAGC...TATAGAGCTCCCTGCAAGCTTAGCCAGGTGATTACAGAAAAGTGGAAGAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | CCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCAAGACCTTGCTTTCTTCTaGACAGCCCAGCACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLYLLSLMDTLNRHQNRQDLAFF*TAQHWV Trigger: GACCCAGTGCTGGGCTGTTCAGAAGAAAGCAAGGTC...TTGCCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATGACCTTGCTTTCTTCTaGACAGCCCAGCACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFRKYQTAQPLYLLSLMDDLAFF*TAQHWV Trigger: GACCCAGTGCTGGGCTGTTCAGAAGAAAGCAAGGTC...ATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | ATAGGCACCAAAATAGGCAATAGCATACATCCACCTATTTCACTGAAGGCTGGTATTTCAGGGCTTCCTTaGAGCTGTGAGGCACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGTKIGNSIHPPISLKAGISGLP*SCEAPV Trigger: AACTGGTGCCTCACAGCTGCAAGGAAGCCCTGAAAT...ACCAGCCTTCAGTGAAATAGGTGGATGTATGCTATTGCCTATTTTGGTGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | AGAGCCACACAAGGGCTCCGCAGTCGTCTTCTTTATACTCTCACAGATATACATTGGGACACTTGGTCTTaGTTATTTCAGGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RATQGLRSRLLYTLTDIHWDTWS*LFQGFL Trigger: AAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCA...ATGTATATCTGTGAGAGTATAAAGAAGACGACTGCGGAGCCCTTGTGTGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGATTCTTTTCCTCTaGGTAGGACGTGGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQPLYLLSLMDTLNRHQNRILFL*VGRGWC Trigger: GCACCAGCCACGTCCTACCCAGAGGAAAAGAATCCT...ATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTGTTTCCTCCTGTAGCAGTTaGCCCCATACATGCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSAHVYSVLFLLVYISLVSSCSS*PHTCRP Trigger: CGGCCTGCATGTATGGGGCCAACTGCTACAGGAGGA...AACAAGGGAGATATAAACAAGAAGAAACAGGACTGAATAAACGTGTGCAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | CTTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTGTTGTGGCTGGTGCTCACTaGAAGCTCTGCATTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAHVYSVLFLLVYISLVVAGAH*KLCIHL Trigger: CAGGTGAATGCAGAGCTTTCAGTGAGCACCAGCCAC...AACAAGGGAGATATAAACAAGAAGAAACAGGACTGAATAAACGTGTGCAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGAAAGCTCTGCATTCACCTGAAGAGGACATAGGATCTATGGTGGGAACTTCAGATTTGGCTTaGTTCGAAGCTGACTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLKALHSPEEDIGSMVGTSDLA*FEADYQ Trigger: TTGATAGTCAGCTTCGAATCAAGCCAAATCTGAAGT...TCCCACCATAGATCCTATGTCCTCTTCAGGTGAATGCAGAGCTTTCAGTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS-3UTR GCA 90 bp | CAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACATCTTCACAGGTTCCTaGTTTTCCACTCCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTAQPLYLLSLMDTLNRHIFTGS*FSTPLD Trigger: ATCCAGAGGAGTGGAAAAGCAGGAACCTGTGAAGAT...GTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCAAAGGATTCTTTTCCTCTaGGTAGGACGTGGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYLLSLMDTLNRHQNRQRILFL*VGRGWC Trigger: GCACCAGCCACGTCCTACCCAGAGGAAAAGAATCCT...TTGCCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| 3UTR CAA 72 bp | AATATATTAGAGACGTGGCACACTGCTGGCTGTCATTaGTTCAAGTCTAGCTTTGTGGGGCCTCTTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NILETWHTAGCH*FKSSFVGPLST Trigger: TGTTGAAAGAGGCCCCACAAAGCTAGACTTGAACAAATGACAGCCAGCAGTGTGCCACGTCTCTAATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCAAAGCCGCTTTTTCCCATaGCATGATGTGTTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLYLLSLMDTLNRHQNRQSRFFP*HDVFPG Trigger: CCCAGGAAACACATCATGGCATGGGAAAAAGCGGCT...TTGCCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | CAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGTCAGCTGTGTCTGTGTaGAAAGCATCAGGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPLYLLSLMDTLNRHQNRSAVSV*KASGLE Trigger: CTCCAGTCCTGATGCTTTGCACACAGACACAGCTGA...CCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAACCACTTCAAGAATaGCATGTCTTCTGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: QTAQPLYLLSLMDTLNRHQPLQE*HVFWIL Trigger: GAGTATCCAGAAGACATGCCATTCTTGAAGTGGTTG...GTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 ENSMUST00000203209.3 |
||
| CDS-3UTR CCA 90 bp | TATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCTATGGTGGGACACTTaGTCTTGGTTATTTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YQTAQPLYLLSLMDTLNRLWWDT*SWLFQG Trigger: GCCCTGAAATAACCAAGACCAAGTGTCCCACCATAG...CCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | ATAGGCACCAAAATAGGCAATAGCATACATCCACCTATTTCACTGAAGGCTGGTTCTTCATCAAGCATCTaGCTGTTTCTCAGAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: IGTKIGNSIHPPISLKAGSSSSI*LFLRVH Trigger: GTGTACTCTGAGAAACAGTCAGATGCTTGATGAAGA...ACCAGCCTTCAGTGAAATAGGTGGATGTATGCTATTGCCTATTTTGGTGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | CTTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTGTTAGATTTCTCAGGAGGTaGCTTGCTTTGGACACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAHVYSVLFLLVYISLVRFLRR*LALDTC Trigger: GCACGTGTCCAAAGCAAGTCACCTCCTGAGAAATCT...AACAAGGGAGATATAAACAAGAAGAAACAGGACTGAATAAACGTGTGCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | TATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCTCCACTTCAGATTCTaGAGAGAAAACACGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YQTAQPLYLLSLMDTLNRLHFRF*RENTES Trigger: GCTTTCCGTGTTTTCTCTGCAGAATCTGAAGTGGAG...CCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGAGCCGCTTTTTCCCATaGCATGATGTGTTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVFRKYQTAQPLYLLSLMSRFFP*HDVFPG Trigger: CCCAGGAAACACATCATGGCATGGGAAAAAGCGGCT...CATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | GATCTTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTTCAGCTGTGTCTGTGTaGAAAGCATCAGGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSAHVYSVLFLLVYISLSAVSV*KASGLE Trigger: CTCCAGTCCTGATGCTTTGCACACAGACACAGCTGA...AAGGGAGATATAAACAAGAAGAAACAGGACTGAATAAACGTGTGCAGAAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATGCTGGAAGTGCACTGTaGCTATATTCCATCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFRKYQTAQPLYLLSLMDAGSAL*LYSILC Trigger: GCACAAGATGGAATATAGGCACAGTGCACTTCCAGC...ATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTATTCGCAGTATGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCACACCCGGTCCTTCTTaGTCAGCCTTTCTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFYSQYVKYLENIRLPNLTPGPS*SAFLHF Trigger: GAAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGT...GAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACATACTGCGAATAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTACTCATCGTCCTTTCCTaGGTGCCAATCAGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKYQTAQPLYLLSLMDTLLIVLS*VPIRIF Trigger: GAAGATTCTGATTGGCACCCAGGAAAGGACGATGAG...TAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR TCA 90 bp | AAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGCTTTTTCCCATGCCATaGTGTGTTTCCTGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVFRKYQTAQPLYLLSLMLFPMP*CVSWGS Trigger: AGAACCCCAGGAAACACATCATGGCATGGGAAAAAG...CATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATATCTTCACAGGTTCCTaGTTTTCCACTCCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFRKYQTAQPLYLLSLMDIFTGS*FSTPLD Trigger: ATCCAGAGGAGTGGAAAAGCAGGAACCTGTGAAGAT...ATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | TATTCGCAGTATGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCCTTGGTCAGCCTTTCTaGACTTCTTCCCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSQYVKYLENIRLPNLFTLGQPF*TSSQGL Trigger: AAGACCCTGGGAAGAAGTGCAGAAAGGCTGACCAAG...GGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACATACTGCGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATTCACACCTTCATCTGTaGCATGTACCTCTCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFRKYQTAQPLYLLSLMDSHLHL*HVPLHS Trigger: ACTATGGAGAGGTACATGGCACAGATGAAGGTGTGA...ATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGCTGGAAGTGCACTGTaGCTATATTCCATCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVFRKYQTAQPLYLLSLMAGSAL*LYSILC Trigger: GCACAAGATGGAATATAGGCACAGTGCACTTCCAGC...CATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTATCGTCCTTTCCTGGGTaGCAATCAGAATCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKYQTAQPLYLLSLMDTLSSFPG*QSESSS Trigger: AGATGAAGATTCTGATTGGCACCCAGGAAAGGACGA...TAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATCAACCACTTCAAGAATaGCATGTCTTCTGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: AQPLYLLSLMDTLNRHQNQPLQE*HVFWIL Trigger: GAGTATCCAGAAGACATGCCATTCTTGAAGTGGTTG...ATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 ENSMUST00000203209.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGCTTTTCCACTCCTCTaGATGACATCCTTATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVFRKYQTAQPLYLLSLMAFPLL*MTSLSP Trigger: GGGAGATAAGGATGTCATCCAGAGGAGTGGAAAAGC...CATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGCTCATCGTCCTTTCCTaGGTGCCAATCAGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVFRKYQTAQPLYLLSLMLIVLS*VPIRIF Trigger: GAAGATTCTGATTGGCACCCAGGAAAGGACGATGAG...CATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACACAACCACTTCAAGAATaGCATGTCTTCTGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: FRKYQTAQPLYLLSLMDTQPLQE*HVFWIL Trigger: GAGTATCCAGAAGACATGCCATTCTTGAAGTGGTTG...TGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 ENSMUST00000203209.3 |
||
| CDS-3UTR TCA 90 bp | TGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGTCTTCATCAAGCATCTaGCTGTTTCTCAGAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: CKVFRKYQTAQPLYLLSLSSSSI*LFLRVH Trigger: GTGTACTCTGAGAAACAGTCAGATGCTTGATGAAGA...CAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTATTCGCAGTATGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCTCGTCCTTTCCTGGGTaGCAATCAGAATCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AFYSQYVKYLENIRLPNLSSFPG*QSESSS Trigger: AGATGAAGATTCTGATTGGCACCCAGGAAAGGACGA...GAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACATACTGCGAATAAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTATTCGCAGTATGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTTGGGACACTTGGTCTTaGTTATTTCAGGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLFAVCKVFRKYQTAQPWDTWS*LFQGFL Trigger: AAGGAAGCCCTGAAATAACCAAGACCAAGTGTCCCA...AGGTTGGGCAGTCTGATATTTTCTAAATACTTTACATACTGCGAATAAAAAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CCA 90 bp | ATATCCACATCTGGGTCCTTTACTATGTTTGAAGATGATGATTCTGGAACATTCTCTCCACTTCAGATTTaGCTTGATTCGAAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISTSGSFTMFEDDDSGTFSPLQI*LDSKLT Trigger: AGTCAGCTTCGAATCAAGCCAAATCTGAAGTGGAGA...GAATGTTCCAGAATCATCATCTTCAAACATAGTAAAGGACCCAGATGTGGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTATTCGCAGTATGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTTGGATTCCTATGGATTaGCTTGATTCGAAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GFLFAVCKVFRKYQTAQPWIPMD*LDSKLT Trigger: AGTCAGCTTCGAATCAAGCCAATCCATAGGAATCCA...AGGTTGGGCAGTCTGATATTTTCTAAATACTTTACATACTGCGAATAAAAAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR GCA 90 bp | TGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGGTGCAAAGAACTTTTTaGTTCTTTCAAAAGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CKVFRKYQTAQPLYLLSLVQRTF*FFQKLI Trigger: GATGAGCTTTTGAAAGAAGCAAAAAGTTCTTTGCAC...CAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032130.8 |
||
| 3UTR CAA 72 bp | TCTTCACAATATCCACATCTGGGTCCTTTACTATGTTaGAAGATGATGATTCTGGAACATTCTCAGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQYPHLGPLLC*KMMILEHSQKK Trigger: TTTCTTCTGAGAATGTTCCAGAATCATCATCTTCAAACATAGTAAAGGACCCAGATGTGGATATTGTGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS-3UTR CAA 90 bp | GGCGCCTTTGGGACTGCCGCCACACCCGCTCCCCACACTGCTTCACGAGCTGATACACGGAAAGCGTACTaGTCAAGTAACAGGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAFGTAATPAPHTASRADTRKAY*SSNREK Trigger: CTTTTCCCTGTTACTTGACAAGTACGCTTTCCGTGT...ATCAGCTCGTGAAGCAGTGTGGGGAGCGGGTGTGGCGGCAGTCCCAAAGGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS CCA 90 bp | AAAGCTATCCCCGGGATGCAACTGGCTCCACACTTGCGTCTCCATTaGCGAGTGTTGGCTCTTCTCCGAGGACTGGTAGAAACATGGATT | + |
|
Preference number: 5 (lower is better) Translates to: KAIPGMQLAPHLRLH*RVLALLRGLVETWI Trigger: AATCCATGTTTCTACCAGTCCTCGGAGAAGAGCCAACACTCGCCAATGGAGACGCAAGTGTGGAGCCAGTTGCATCCCGGGGATAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | ACGCAGTTGTGGATGCACAAAAACCATTTCCTTGCAAGGCGAGTACTGCTGCCCAACACCCGGTCCTTCTaGGTCAGCCTTTCTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TQLWMHKNHFLARRVLLPNTRSF*VSLSAL Trigger: AAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGTT...GGGCAGCAGTACTCGCCTTGCAAGGAAATGGTTTTTGTGCATCCACAACTGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065997.5 |
||
| CDS CCA 90 bp | CTCCATTGGCGAGTGTTGGCTCTTCTCCGAGGACTGGTAGAAACATaGATTCCTATGGATTGGCTTGATTCGAAGCTGACTATCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHWRVLALLRGLVET*IPMDWLDSKLTINH Trigger: GTGGTTGATAGTCAGCTTCGAATCAAGCCAATCCATAGGAATCCATGTTTCTACCAGTCCTCGGAGAAGAGCCAACACTCGCCAATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCAAGCCGTCCTCCGGACCTaGCTTTCTTCTGAACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLYLLSLMDTLNRHQNRQAVLRT*LSSEQP Trigger: GGGCTGTTCAGAAGAAAGCAAGGTCCGGAGGACGGC...TTGCCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGCACCAAAATAGGCAATAGCATACATCCACCTATTTCACTGAAGGCTGGTAGGGTGGCTGAAGTGTaGAAAGTGGAGGGGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IGTKIGNSIHPPISLKAGRVAEV*KVEGVP Trigger: AGGAACCCCCTCCACTTTCAACACTTCAGCCACCCT...ACCAGCCTTCAGTGAAATAGGTGGATGTATGCTATTGCCTATTTTGGTGCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | TGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGGCCGTCCTCCGGACCTaGCTTTCTTCTGAACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CKVFRKYQTAQPLYLLSLAVLRT*LSSEQP Trigger: GGGCTGTTCAGAAGAAAGCAAGGTCCGGAGGACGGC...CAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | CAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGAGGGTGGCTGAAGTGTaGAAAGTGGAGGGGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPLYLLSLMDTLNRHQNRRVAEV*KVEGVP Trigger: AGGAACCCCCTCCACTTTCAACACTTCAGCCACCCT...CCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGCACCAAAATAGGCAATAGCATACATCCACCTATTTCACTGAAGGCTGGTTGCCTATATTCCATCTaGTGCTGGGGGTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGTKIGNSIHPPISLKAGCLYSI*CWGFFL Trigger: CAGGAAGAACCCCCAGCACAAGATGGAATATAGGCA...ACCAGCCTTCAGTGAAATAGGTGGATGTATGCTATTGCCTATTTTGGTGCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACAAACACCCGGTCCTTCTaGGTCAGCCTTTCTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: FRKYQTAQPLYLLSLMDTNTRSF*VSLSAL Trigger: AAGTGCAGAAAGGCTGACCAAGAAGGACCGGGTGTT...TGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS TCA 90 bp | CAGAGTACACTCCATCTCCACTTCAGATTTGGCTTGATTCGAAGCTaGCTATCAACCACTTCAAGAATGGCATGTCTTCTGGATACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSTLHLHFRFGLIRS*LSTTSRMACLLDTL Trigger: AAGAGTATCCAGAAGACATGCCATTCTTGAAGTGGTTGATAGTCAGCTTCGAATCAAGCCAAATCTGAAGTGGAGATGGAGTGTACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
||
| CDS GCA 90 bp | TGCAAAGAACTTTTTGCTTCTTTCAAAAGCTCATCCACATCTTCCTaGTCCTCATCGTCCTTTCCTGGGTGCCAATCAGAATCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CKELFASFKSSSTSS*SSSSFPGCQSESSS Trigger: AGATGAAGATTCTGATTGGCACCCAGGAAAGGACGATGAGGAGCAGGAAGATGTGGATGAGCTTTTGAAAGAAGCAAAAAGTTCTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032130.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCAATGCCTATATTCCATCTaGTGCTGGGGGTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLYLLSLMDTLNRHQNRQCLYSI*CWGFFL Trigger: CAGGAAGAACCCCCAGCACAAGATGGAATATAGGCA...TTGCCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | TATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCTTCTGGATACTCTTTaGTCTGTTATTCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YQTAQPLYLLSLMDTLNRLLDTL*SVIPSS Trigger: GCTGCTGGGAATAACAGACAAAAGAGTATCCAGAAG...CCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032130.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTATTCGCAGTATGTAAAGTATTTAGAAAATATCAGACTGCCCAACCTCACACGGAAAGCGTACTaGTCAAGTAACAGGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AFYSQYVKYLENIRLPNLTRKAY*SSNREK Trigger: CTTTTCCCTGTTACTTGACAAGTACGCTTTCCGTGT...GAGGTTGGGCAGTCTGATATTTTCTAAATACTTTACATACTGCGAATAAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAATATCAGACTGCCCAACCTCTTTACCTGCTTTCACTGATGGATACATTACGTCCTTCTGTTTATTaGTCTTCACAATATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RKYQTAQPLYLLSLMDTLRPSVY*SSQYPH Trigger: ATGTGGATATTGTGAAGACAAATAAACAGAAGGACG...TAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTGGGCAGTCTGATATTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS-3UTR CAA 90 bp | CAACCTCTTTACCTGCTTTCACTGATGGATACATTAAATAGGCACCAAAATAGGCGTCCTTCTGTTTATTaGTCTTCACAATATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QPLYLLSLMDTLNRHQNRRPSVY*SSQYPH Trigger: ATGTGGATATTGTGAAGACAAATAAACAGAAGGACG...CCTATTTTGGTGCCTATTTAATGTATCCATCAGTGAAAGCAGGTAAAGAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS CAA 90 bp | CCCGGGATGCAACTGGCTCCACACTTGCGTCTCCATTGGCGAGTGTaGGCTCTTCTCCGAGGACTGGTAGAAACATGGATTCCTATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGMQLAPHLRLHWRV*ALLRGLVETWIPMD Trigger: ATCCATAGGAATCCATGTTTCTACCAGTCCTCGGAGAAGAGCCAACACTCGCCAATGGAGACGCAAGTGTGGAGCCAGTTGCATCCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
||
| CDS CCA 72 bp | TCAAGTAACAGGGAAAAGCTATCCCCGGGATGCAACTaGCTCCACACTTGCGTCTCCATTGGCGAGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSNREKLSPGCN*LHTCVSIGECW Trigger: CCAACACTCGCCAATGGAGACGCAAGTGTGGAGCCAGTTGCATCCCGGGGATAGCTTTTCCCTGTTACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
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| CDS GCA 72 bp | TACTTGTCAAGTAACAGGGAAAAGCTATCCCCGGGATaGAACTGGCTCCACACTTGCGTCTCCATTGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: YLSSNREKLSPG*NWLHTCVSIGE Trigger: CTCGCCAATGGAGACGCAAGTGTGGAGCCAGTTGCATCCCGGGGATAGCTTTTCCCTGTTACTTGACAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
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| CDS CAA 72 bp | CAACTGGCTCCACACTTGCGTCTCCATTGGCGAGTGTaGGCTCTTCTCCGAGGACTGGTAGAAACATGGATT | + |
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Preference number: 6 (lower is better) Translates to: QLAPHLRLHWRV*ALLRGLVETWI Trigger: AATCCATGTTTCTACCAGTCCTCGGAGAAGAGCCAACACTCGCCAATGGAGACGCAAGTGTGGAGCCAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
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| CDS CCA 72 bp | CGAGTGTTGGCTCTTCTCCGAGGACTGGTAGAAACATaGATTCCTATGGATTGGCTTGATTCGAAGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: RVLALLRGLVET*IPMDWLDSKLT Trigger: AGTCAGCTTCGAATCAAGCCAATCCATAGGAATCCATGTTTCTACCAGTCCTCGGAGAAGAGCCAACACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
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| CDS CCA 72 bp | CTCCGAGGACTGGTAGAAACATGGATTCCTATGGATTaGCTTGATTCGAAGCTGACTATCAACCACTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LRGLVETWIPMD*LDSKLTINHFK Trigger: CTTGAAGTGGTTGATAGTCAGCTTCGAATCAAGCCAATCCATAGGAATCCATGTTTCTACCAGTCCTCGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
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| CDS TCA 72 bp | CTCCATCTCCACTTCAGATTTGGCTTGATTCGAAGCTaGCTATCAACCACTTCAAGAATGGCATGTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LHLHFRFGLIRS*LSTTSRMACLL Trigger: CAGAAGACATGCCATTCTTGAAGTGGTTGATAGTCAGCTTCGAATCAAGCCAAATCTGAAGTGGAGATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203209.3 |
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| CDS TCA 72 bp | AAACATGGATTCCTATGGATTGGCTTGATTCGAAGCTaGCTATCAACCACTTCAAGAATGGCATGTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KHGFLWIGLIRS*LSTTSRMACLL Trigger: CAGAAGACATGCCATTCTTGAAGTGGTTGATAGTCAGCTTCGAATCAAGCCAATCCATAGGAATCCATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032130.8 ENSMUST00000065997.5 |
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