Pregenerated sensors for APH1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053040Ensembl transcript IDs: ENSMUST00000057261.9, ENSMUST00000169282.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCAGGCTGCAGGCTACACTGCAGCTCTTCCAGAGGCTGCTGCATaGAAGCACAGGACAGTTCCAGGCTGGACAGTTCTGTGGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SQAAGYTAALPEAAA*KHRTVPGWTVLWLP Trigger: TGGAAGCCACAGAACTGTCCAGCCTGGAACTGTCCTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | GAAGCCCAGAAGCATCAGTCCTTGTTTCCCCAGATGCTTCAAATGTaGAGCCAGGCTGCAGGCTACACTGCAGCTCTTCCAGAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: EAQKHQSLFPQMLQM*SQAAGYTAALPEAA Trigger: AGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGACTGATGCTTCTGGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | TCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTGATAGACAGTaGACGTGTGTGCTGGGATCACCAAGGCATCACTTCCACCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SLPNPLTAAPGSDRQ*TCVLGSPRHHFHQE Trigger: CTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACACGTGCACTGTCTATCAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | ACCCTCTCACTGCTGCCCCTGGTTCTGATAGACAGTGCACGTGTGTaGTGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATTGCTA | + |
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Preference number: 1 (lower is better) Translates to: TLSLLPLVLIDSARV*WDHQGITSTKRSLL Trigger: TAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACACGTGCACTGTCTATCAGAACCAGGGGCAGCAGTGAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | TCAAGTCTGGAGAAGCCCAGAAGCATCAGTCCTTGTTTCCCCAGATaGTTCAAATGTGCAGCCAGGCTGCAGGCTACACTGCAGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSLEKPRSISPCFPR*FKCAARLQATLQLF Trigger: GAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGACTGATGCTTCTGGGCTTCTCCAGACTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | TTCTTCTTGTTACCATGGTGCTGTCACGCTCACCTCCAGTGTCACTaGCAAACCCTCTCACTGCTGCCCCTGGTTCTGATAGACAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: FFLLPWCCHAHLQCH*QTLSLLPLVLIDSA Trigger: TGCACTGTCTATCAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTGGAGGTGAGCGTGACAGCACCATGGTAACAAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 90 bp | CACCCAACAACTAGAGTGGGGCTATCCTTAAAGCTCTTGCCTGTCTaGGAAATATGGTCCCCTAATTGGGCTGCCTTGTACTGGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: HPTTRVGLSLKLLPV*EIWSPNWAALYWPQ Trigger: CTGAGGCCAGTACAAGGCAGCCCAATTAGGGGACCATATTTCTCAGACAGGCAAGAGCTTTAAGGATAGCCCCACTCTAGTTGTTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | CTGGAGAGACAGAAATGGTGGACAGGAATGAAAGTGAAATTTGCCTaGCTGAGTGCGGCCACTGGGTTCCCTGGTAGAAAGTGTTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LERQKWWTGMKVKFA*LSAATGFPGRKCSS Trigger: TGAAGAACACTTTCTACCAGGGAACCCAGTGGCCGCACTCAGGCAGGCAAATTTCACTTTCATTCCTGTCCACCATTTCTGTCTCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 90 bp | GCAACAGAGCTCATTATAGATGGCTACGAGCTACCATGTGTTTGCTaGAAATTGAACTCAGGACAGTCAGTGCCCTTAACCCCTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: ATELIIDGYELPCVC*KLNSGQSVPLTPEP Trigger: TGGCTCAGGGGTTAAGGGCACTGACTGTCCTGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTCTGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | GTGTGTGCTGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATTaGTACTTTACACTCTGTTCCCAAAAGACTTGGATTGGGAACAGT | + |
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Preference number: 1 (lower is better) Translates to: VCAGITKASLPPRGH*YFTLCSQKTWIGNS Trigger: ACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 90 bp | CTGACTGCATCTTTGTTTAAAACACACCCATTCTTCTTGTTACCATaGTGCTGTCACGCTCACCTCCAGTGTCACTGCCAAACCCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LTASLFKTHPFFLLP*CCHAHLQCHCQTLS Trigger: TGAGAGGGTTTGGCAGTGACACTGGAGGTGAGCGTGACAGCACCATGGTAACAAGAAGAATGGGTGTGTTTTAAACAAAGATGCAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | CTACTTTGTGGTTTAGCTACACTCTTGCAAAGTCCAGAGAAGATCTaGCAAAGGTCCATCATTCATCTCCCTGCCCAGCTTCTCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: LLCGLATLLQSPEKI*QRSIIHLPAQLLRD Trigger: ATCTCTGAGAAGCTGGGCAGGGAGATGAATGATGGACCTTTGGCAGATCTTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 90 bp | ATGATCAGTATAAACCTGGAGCAGCCTCATTCAAACAGAGCCAACTaGCACCATATGGATTCCTGTGATAGGTCCTCCCAGTTTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: MISINLEQPHSNRAN*HHMDSCDRSSQFPE Trigger: TTCAGGAAACTGGGAGGACCTATCACAGGAATCCATATGGTGGCAGTTGGCTCTGTTTGAATGAGGCTGCTCCAGGTTTATACTGATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 90 bp | AGGAAGGCTGCTACAGAATTAATAACAACTCTGGAGAGACAGAAATaGTGGACAGGAATGAAAGTGAAATTTGCCTGCCTGAGTGCGGCC | + |
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Preference number: 1 (lower is better) Translates to: RKAATELITTLERQK*WTGMKVKFACLSAA Trigger: GGCCGCACTCAGGCAGGCAAATTTCACTTTCATTCCTGTCCACCATTTCTGTCTCTCCAGAGTTGTTATTAATTCTGTAGCAGCCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 90 bp | ATATGTATCTGCAAGCCAGATGAGGGCAACAGAGCTCATTATAGATaGCTACGAGCTACCATGTGTTTGCTGGAAATTGAACTCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: ICICKPDEGNRAHYR*LRATMCLLEIELRT Trigger: TGTCCTGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTCTGTTGCCCTCATCTGGCTTGCAGATACATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 90 bp | GGTGTCACAGTAGCAAATGAGAAGTGTCAATGTCACACTACTTTGTaGTTTAGCTACACTCTTGCAAAGTCCAGAGAAGATCTGCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: GVTVANEKCQCHTTL*FSYTLAKSREDLPK Trigger: CTTTGGCAGATCTTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCATTTGCTACTGTGACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 90 bp | GACCTAAAGAAGCTAAACAGGAGGGAAGGCCCAATTGAGAATGATTaGCTTTCACTTAGAAGGGGAAATAAAACAGTTATAGGAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: DLKKLNRREGPIEND*LSLRRGNKTVIGDR Trigger: TCTGTCTCCTATAACTGTTTTATTTCCCCTTCTAAGTGAAAGTCAATCATTCTCAATTGGGCCTTCCCTCCTGTTTAGCTTCTTTAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAGGATGGGGACTGAACCACCAACCAAAGAGCATGCACAGGCTGGACCTGACAGTGCACGTGTGTaGTGGGATCACCAAGGCATC | + |
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Preference number: 2 (lower is better) Translates to: GTRMGTEPPTKEHAQAGPDSARV*WDHQGI Trigger: GATGCCTTGGTGATCCCAGCACACACGTGCACTGTC...AGGTCCAGCCTGTGCATGCTCTTTGGTTGGTGGTTCAGTCCCCATCCTTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTGATAGACAGTGCACGTGTGGGCTGGACAGTTCTGTaGCTTCCAAGTTCCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HCQTLSLLPLVLIDSARVGWTVL*LPSSKR Trigger: TCTCTTGGAACTTGGAAGCCACAGAACTGTCCAGCC...CACACGTGCACTGTCTATCAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAGGATGGGGACTGAACCACCAACCAAAGAGCATGCACAGGCTGGACCTGTCTTTAGCTACTGCTaGACACTGATGTCCACTGTT | + |
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Preference number: 2 (lower is better) Translates to: GTRMGTEPPTKEHAQAGPVFSYC*TLMSTV Trigger: AACAGTGGACATCAGTGTGCAGCAGTAGCTAAAGAC...AGGTCCAGCCTGTGCATGCTCTTTGGTTGGTGGTTCAGTCCCCATCCTTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CAA 90 bp | ACATCCAGGATAATCAAGTCTGGAGAAGCCCAGAAGCATCAGTCCTaGTTTCCCCAGATGCTTCAAATGTGCAGCCAGGCTGCAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: TSRIIKSGEAQKHQS*FPQMLQMCSQAAGY Trigger: GTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGACTGATGCTTCTGGGCTTCTCCAGACTTGATTATCCTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTGATAGACAGTGCACGTGTGAGTCCAGAGAAGATCTaGCAAAGGTCCATCATTCAT | + |
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Preference number: 2 (lower is better) Translates to: HCQTLSLLPLVLIDSARVSPEKI*QRSIIH Trigger: ATGAATGATGGACCTTTGGCAGATCTTCTCTGGACT...CACACGTGCACTGTCTATCAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAATGGTGGACAGGAATGAAAGTGAAATTTGCCTGCCTGAGTGCGGCCACTAGAGGGTCACTGATCTaGACCAAGAGGCAGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: QKWWTGMKVKFACLSAATRGSLI*TKRQSP Trigger: TGGAGACTGCCTCTTGGTGCAGATCAGTGACCCTCT...AGTGGCCGCACTCAGGCAGGCAAATTTCACTTTCATTCCTGTCCACCATTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CAA 90 bp | CGTGTGTGCTGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATaGCTACTTTACACTCTGTTCCCAAAAGACTTGGATTGGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: RVCWDHQGITSTKRS*LLYTLFPKDLDWEQ Trigger: CTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CAA 90 bp | GAGCTCATTATAGATGGCTACGAGCTACCATGTGTTTGCTGGAAATaGAACTCAGGACAGTCAGTGCCCTTAACCCCTGAGCCATCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ELIIDGYELPCVCWK*NSGQSVPLTPEPSL Trigger: GAGAGATGGCTCAGGGGTTAAGGGCACTGACTGTCCTGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCACATATGTAGCAGATGTGAAGTTCTTTCTTCATGTGGATCACCCAACACACCTCCAGTGTCACTaGCAAACCCTCTCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PSTYVADVKFFLHVDHPTHLQCH*QTLSLL Trigger: CAGCAGTGAGAGGGTTTGGCAGTGACACTGGAGGTG...TGTTGGGTGATCCACATGAAGAAAGAACTTCACATCTGCTACATATGTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTTCAGATCAGCAGCTAACACAAAGGAACAGGGATGGGCTACAGAAAGGCTGCCAGCTTGAAATCTaGCAGCTTAAGGTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: CSSDQQLTQRNRDGLQKGCQLEI*QLKVYL Trigger: GAGATAGACCTTAAGCTGCCAGATTTCAAGCTGGCA...GCCTTTCTGTAGCCCATCCCTGTTCCTTTGTGTTAGCTGCTGATCTGAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CAA 90 bp | CAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTTGGATaGGGAACAGTCTCCACAGTAGACTCCCAATGCAGTAGCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: QEVIATLHSVPKRLG*GTVSTVDSQCSSIP Trigger: AGGAATGCTACTGCATTGGGAGTCTACTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTTCAGATCAGCAGCTAACACAAAGGAACAGGGATGGGCTACAGAAAGGCGAGCTACCATGTGTTTaGTGGAAATTGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CSSDQQLTQRNRDGLQKGELPCV*WKLNSG Trigger: TCCTGAGTTCAATTTCCAGCAAACACATGGTAGCTC...GCCTTTCTGTAGCCCATCCCTGTTCCTTTGTGTTAGCTGCTGATCTGAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTTCAGATCAGCAGCTAACACAAAGGAACAGGGATGGGCTACAGAAAGGCCTACCATGTGTTTGCTaGAAATTGAACTCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: CSSDQQLTQRNRDGLQKGLPCVC*KLNSGQ Trigger: CTGTCCTGAGTTCAATTTCCAGCAAACACATGGTAG...GCCTTTCTGTAGCCCATCCCTGTTCCTTTGTGTTAGCTGCTGATCTGAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CAA 90 bp | CCAGAACCCAGGCAAACTGCTGAAGATGAAAAGTTACATGCCAGCTaGAAATCTGGCAGCTTAAGGTCTATCTCCAACTTTACTCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PEPRQTAEDEKLHAS*KSGSLRSISNFTLY Trigger: GTACAGAGTAAAGTTGGAGATAGACCTTAAGCTGCCAGATTTCAAGCTGGCATGTAACTTTTCATCTTCAGCAGTTTGCCTGGGTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCTGGAGATTCAGATATTTACTTaGTCAGCTGAAGTTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: GIGPEAGSSGKMISINLEIQIFT*SAEVGL Trigger: TAAGCCAACTTCAGCTGAGCAAGTAAATATCTGAAT...CTCCAGGTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCATTATAGATGGCTACGAGCTACCATGTGTTTGCTGGAAATTGAACTCACAGGATAATCAAGTCTaGAGAAGCCCAGAAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: ELIIDGYELPCVCWKLNSQDNQV*RSPEAS Trigger: TGATGCTTCTGGGCTTCTCCAGACTTGATTATCCTG...TGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CAA 90 bp | TTTGGTGTCACAGTAGCAAATGAGAAGTGTCAATGTCACACTACTTaGTGGTTTAGCTACACTCTTGCAAAGTCCAGAGAAGATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: FGVTVANEKCQCHTT*WFSYTLAKSREDLP Trigger: TGGCAGATCTTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCATTTGCTACTGTGACACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCAATGTCACACTACTTTGTGGTTTAGCTACACTCTTGCAAAGTCCAGAGAAATTTACTTGCTCAGCTaGAGTTGGCTTAGAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: CQCHTTLWFSYTLAKSREIYLLS*SWLRRP Trigger: TGGTCTTCTAAGCCAACTTCAGCTGAGCAAGTAAAT...TTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTTGGATTGGGAACATGTCACACTACTTTGTaGTTTAGCTACACTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QEVIATLHSVPKRLGLGTCHTTL*FSYTLA Trigger: TGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACA...TGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 72 bp | ATGCCAGGGTTTGGGGATACACAGGGAGGGAGTGTGTaGGATGAGGACCAGGAAGGGGTGCAGCAATTGGGG | + |
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Preference number: 3 (lower is better) Translates to: MPGFGDTQGGSV*DEDQEGVQQLG Trigger: CCCCAATTGCTGCACCCCTTCCTGGTCCTCATCTCACACACTCCCTCCCTGTGTATCCCCAAACCCTGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 72 bp | AACCCTCTCACTGCTGCCCCTGGTTCTGATAGACAGTaGACGTGTGTGCTGGGATCACCAAGGCATCACTTC | + |
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Preference number: 3 (lower is better) Translates to: NPLTAAPGSDRQ*TCVLGSPRHHF Trigger: GAAGTGATGCCTTGGTGATCCCAGCACACACGTGCACTGTCTATCAGAACCAGGGGCAGCAGTGAGAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 72 bp | AAGCATCAGTCCTTGTTTCCCCAGATGCTTCAAATGTaGAGCCAGGCTGCAGGCTACACTGCAGCTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: KHQSLFPQMLQM*SQAAGYTAALP Trigger: TGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGACTGATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR GCA 72 bp | CAGAAATGGTGGACAGGAATGAAAGTGAAATTTGCCTaGCTGAGTGCGGCCACTGGGTTCCCTGGTAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: QKWWTGMKVKFA*LSAATGFPGRK Trigger: CTTTCTACCAGGGAACCCAGTGGCCGCACTCAGGCAGGCAAATTTCACTTTCATTCCTGTCCACCATTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CAA 90 bp | GGGACAAGGATGGGGACTGAACCACCAACCAAAGAGCATGCACAGGCTGGACCTGCTAAATTGGATTTCTaGGGGCCTATTACAATATGG | + |
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Preference number: 3 (lower is better) Translates to: GTRMGTEPPTKEHAQAGPAKLDF*GPITIW Trigger: CCATATTGTAATAGGCCCCAAGAAATCCAATTTAGC...AGGTCCAGCCTGTGCATGCTCTTTGGTTGGTGGTTCAGTCCCCATCCTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 72 bp | CAAACCCATCCACAGACAGAACAGCCCTGGAGTCTGTaGCATCAGTACATAAAAAGACAAGGGCTACGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QTHPQTEQPWSL*HQYIKRQGLRW Trigger: CCAGCGTAGCCCTTGTCTTTTTATGTACTGATGTCACAGACTCCAGGGCTGTTCTGTCTGTGGATGGGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 72 bp | AGCAGCCTCATTCAAACAGAGCCAACTGCCACCATATaGATTCCTGTGATAGGTCCTCCCAGTTTCCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SSLIQTEPTATI*IPVIGPPSFLN Trigger: GTTCAGGAAACTGGGAGGACCTATCACAGGAATCCATATGGTGGCAGTTGGCTCTGTTTGAATGAGGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR CCA 72 bp | TTCTTCAGATCAGCAGCTAACACAAAGGAACAGGGATaGGCTACAGAAAGGCTGAGAGGGTCACTGATCTGC | + |
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Preference number: 3 (lower is better) Translates to: FFRSAANTKEQG*ATERLRGSLIC Trigger: GCAGATCAGTGACCCTCTCAGCCTTTCTGTAGCCCATCCCTGTTCCTTTGTGTTAGCTGCTGATCTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 72 bp | TCCTCACCTGTGTTACAGGCTCAGAGGTATTGGCCCTaGAGCTGGATCATCCGGGAAGATGATCAGTATAAA | + |
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Preference number: 3 (lower is better) Translates to: SSPVLQAQRYWP*SWIIREDDQYK Trigger: TTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAGCCTGTAACACAGGTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 72 bp | ACTAGAGTGGGGCTATCCTTAAAGCTCTTGCCTGTCTaGGAAATATGGTCCCCTAATTGGGCTGCCTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: TRVGLSLKLLPV*EIWSPNWAALY Trigger: GTACAAGGCAGCCCAATTAGGGGACCATATTTCTCAGACAGGCAAGAGCTTTAAGGATAGCCCCACTCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTTCAGATCAGCAGCTAACACAAAGGAACAGGGATGGGCTACAGAAAGGCCCCAAAAGACTTGGATaGGGAACAGTCTCCACAGTA | + |
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Preference number: 3 (lower is better) Translates to: CSSDQQLTQRNRDGLQKGPKRLG*GTVSTV Trigger: TACTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGG...GCCTTTCTGTAGCCCATCCCTGTTCCTTTGTGTTAGCTGCTGATCTGAAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
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| 3UTR TCA 72 bp | TTTCACTGGCCTCTGTCTTTAGCTACTGCTGCACACTaGTGTCCACTGTTGGTTTCTGAGCCTTTGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FHWPLSLATAAH*CPLLVSEPLSF Trigger: GAAAGACAAAGGCTCAGAAACCAACAGTGGACATCAGTGTGCAGCAGTAGCTAAAGACAGAGGCCAGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR GCA 72 bp | TTGTTTAAAACACACCCATTCTTCTTGTTACCATGGTaGTGTCACGCTCACCTCCAGTGTCACTGCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LFKTHPFFLLPW*CHAHLQCHCQT Trigger: GGTTTGGCAGTGACACTGGAGGTGAGCGTGACAGCACCATGGTAACAAGAAGAATGGGTGTGTTTTAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGGATTCTCGGGCAGTCTGTAGTCTTGCTAGAAGCTTCATTATTCTTGCAACACACCCATTCTTCTaGTTACCATGGTGCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: MVDSRAVCSLARSFIILATHPFF*LPWCCH Trigger: GTGACAGCACCATGGTAACAAGAAGAATGGGTGTGT...TGCAAGAATAATGAAGCTTCTAGCAAGACTACAGACTGCCCGAGAATCCACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCTGGAGGAAGCTTCATTATTCTaGCATCTCTACACAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: GIGPEAGSSGKMISINLEEASLF*HLYTDT Trigger: AGTGTCTGTGTAGAGATGCAAGAATAATGAAGCTTC...CTCCAGGTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR GCA 72 bp | GAGCTCATTATAGATGGCTACGAGCTACCATGTGTTTaGTGGAAATTGAACTCAGGACAGTCAGTGCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ELIIDGYELPCV*WKLNSGQSVPL Trigger: TAAGGGCACTGACTGTCCTGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR GCA 72 bp | ATCTGCACCAAGAGGCAGTCTCCAGGGTATCGAGATTaGACTGGTAATAACAGTAATTCTGGAGAGACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ICTKRQSPGYRD*TGNNSNSGETV Trigger: TACTGTCTCTCCAGAATTACTGTTATTACCAGTGCAATCTCGATACCCTGGAGACTGCCTCTTGGTGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CCA 72 bp | GGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTTaGATTGGGAACAGTCTCCACAGTAGACTCCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: GHCYFTLCSQKT*IGNSLHSRLPM Trigger: CATTGGGAGTCTACTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CCA 72 bp | TCTTTGTTTAAAACACACCCATTCTTCTTGTTACCATaGTGCTGTCACGCTCACCTCCAGTGTCACTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLFKTHPFFLLP*CCHAHLQCHCQ Trigger: TTGGCAGTGACACTGGAGGTGAGCGTGACAGCACCATGGTAACAAGAAGAATGGGTGTGTTTTAAACAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CCA 72 bp | CTCATTATAGATGGCTACGAGCTACCATGTGTTTGCTaGAAATTGAACTCAGGACAGTCAGTGCCCTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: LIIDGYELPCVC*KLNSGQSVPLT Trigger: GGTTAAGGGCACTGACTGTCCTGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CCA 72 bp | TGCAAGCCAGATGAGGGCAACAGAGCTCATTATAGATaGCTACGAGCTACCATGTGTTTGCTGGAAATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CKPDEGNRAHYR*LRATMCLLEIE Trigger: TTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTCTGTTGCCCTCATCTGGCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCACATATGTAGCAGATGTGAAGTTCTTTCTTCATGTGGATCACCCAACATGTGTTTGCTGGAAATaGAACTCAGGACAGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PSTYVADVKFFLHVDHPTCVCWK*NSGQSV Trigger: CACTGACTGTCCTGAGTTCAATTTCCAGCAAACACA...TGTTGGGTGATCCACATGAAGAAAGAACTTCACATCTGCTACATATGTGCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGGGCTACGCTGGTTACCACATTCAGATATTTACTTGCTCAGCTGAAGTTAACACTAAACAGCTTTaGGGTGTTTTCTCGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: DKGYAGYHIQIFTCSAEVNTKQL*GVFSNS Trigger: GGAGTTCGAGAAAACACCCAAAAGCTGTTTAGTGTT...AACTTCAGCTGAGCAAGTAAATATCTGAATGTGGTAACCAGCGTAGCCCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTTGGATTGGGAACAGGTTTAGCTACACTCTaGCAAAGTCCAGAGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QEVIATLHSVPKRLGLGTGLATL*QSPEKI Trigger: GATCTTCTCTGGACTTTGCAAGAGTGTAGCTAAACC...TGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR TCA 72 bp | ATGTTTCACCACCTCCTGGCATATTTACAGACTTTTTaGGGTAAGTCTCTAGCTCAAGCTGGCCTTAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: MFHHLLAYLQTF*GKSLAQAGLKL Trigger: TAGTTTAAGGCCAGCTTGAGCTAGAGACTTACCTCAAAAAGTCTGTAAATATGCCAGGAGGTGGTGAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CCA 72 bp | GTAGCAAATGAGAAGTGTCAATGTCACACTACTTTGTaGTTTAGCTACACTCTTGCAAAGTCCAGAGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VANEKCQCHTTL*FSYTLAKSRED Trigger: ATCTTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCATTTGCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CCA 72 bp | AATGAGAAAACTACAGGTTCTACATGGACCTTACCTTaGCTAAGTTATAATGCCAGTGTAGGTTACTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: NEKTTGSTWTLP*LSYNASVGYCI Trigger: AATGCAGTAACCTACACTGGCATTATAACTTAGCCAAGGTAAGGTCCATGTAGAACCTGTAGTTTTCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR TCA 72 bp | AAGCTAAACAGGAGGGAAGGCCCAATTGAGAATGATTaGCTTTCACTTAGAAGGGGAAATAAAACAGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: KLNRREGPIEND*LSLRRGNKTVI Trigger: TATAACTGTTTTATTTCCCCTTCTAAGTGAAAGTCAATCATTCTCAATTGGGCCTTCCCTCCTGTTTAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR TCA 72 bp | CACTGTTGGTTTCTGAGCCTTTGTCTTTCTAGTCCATaGAAAATCATATATGAAGCTACAAACCAACAAACT | + |
|
Preference number: 3 (lower is better) Translates to: HCWFLSLCLSSP*KIIYEATNQQT Trigger: AGTTTGTTGGTTTGTAGCTTCATATATGATTTTTCATGGACTAGAAAGACAAAGGCTCAGAAACCAACAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGATTCTCGGGCAGTCTGTAGTCTTGCTAGAAGCTTCATTATTCTTGCACGGGCCCGAAGGCGATaGAGGCGCAACCGAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MVDSRAVCSLARSFIILARARRR*RRNRRT Trigger: TGTTCTTCGGTTGCGCCTTCATCGCCTTCGGGCCCG...TGCAAGAATAATGAAGCTTCTAGCAAGACTACAGACTGCCCGAGAATCCACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAAGGATGGGGACTGAACCACCAACCAAAGAGCATGCACAGGCTGGACCTCTAGGAACCAAAACATaGACGAAAGCAGGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTRMGTEPPTKEHAQAGPLGTKT*TKAGET Trigger: TGTCTCTCCTGCTTTCGTCCATGTTTTGGTTCCTAG...AGGTCCAGCCTGTGCATGCTCTTTGGTTGGTGGTTCAGTCCCCATCCTTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAACAGGGATGGGCTACAGAAAGGCTGAGAGGGTCACTGATCTGCACCAAGGCAACGCTCCGAAGATaGGCAGATAATTCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEQGWATERLRGSLICTKATLRR*ADNSVL Trigger: CAGTACAGAATTATCTGCTCATCTTCGGAGCGTTGC...CTTGGTGCAGATCAGTGACCCTCTCAGCCTTTCTGTAGCCCATCCCTGTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | TCTGGTTTGGTCTTTGTTGAGTGGGTAGTCTGTTCTTaGGTTCTTGTTGCTCACTGCTCTGGGGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLVFVEWVVCS*VLVAHCSGGPQ Trigger: CTGGGGACCCCCAGAGCAGTGAGCAACAAGAACCAAAGAACAGACTACCCACTCAACAAAGACCAAACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR TCA 90 bp | GGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCTGGAGAAAACACTCCACTCATaGTTCCAAAGCCCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIGPEAGSSGKMISINLEKTLHS*FQSPSQ Trigger: CTGGCTTGGGCTTTGGAATCATGAGTGGAGTGTTTT...CTCCAGGTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | ATAATCAAGTCTGGAGAAGCCCAGAAGCATCAGTCCTaGTTTCCCCAGATGCTTCAAATGTGCAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIKSGEAQKHQS*FPQMLQMCSQA Trigger: AGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGACTGATGCTTCTGGGCTTCTCCAGACTTGATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTCATTATAGATGGCTACGAGCTACCATGTGTTTGCTGGAAATTGAACTCAAATGCCCACTGTGCCTaGCCCCAAGGAGTTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ELIIDGYELPCVCWKLNSNAHCA*PQGVRQ Trigger: CTGTCTAACTCCTTGGGGCCAGGCACAGTGGGCATT...TGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGATTCTCGGGCAGTCTGTAGTCTTGCTAGAAGCTTCATTATTCTTGCACCTCCTCCGGGTTTATaGTTTTCAAACCCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVDSRAVCSLARSFIILAPPPGL*FSNPHW Trigger: CCAGTGAGGGTTTGAAAAGCATAAACCCGGAGGAGG...TGCAAGAATAATGAAGCTTCTAGCAAGACTACAGACTGCCCGAGAATCCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR GCA 90 bp | GATTCTCGGGCAGTCTGTAGTCTTGCTAGAAGCTTCATTATTCTTGCATCTCTATCAGGCTTCGGCAGCTaGCTCCAGCAACATAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: DSRAVCSLARSFIILASLSGFGS*LQQHKM Trigger: CATTTTATGTTGCTGGAGGCAGCTGCCGAAGCCTGA...TAGAGATGCAAGAATAATGAAGCTTCTAGCAAGACTACAGACTGCCCGAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | AAGCCAGAGGCCTTATCTGGAAGACTAACAAAGCCCTaGCATAGTCCTGTAAAGGGAATGCTGTTTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPEALSGRLTKP*HSPVKGMLFVS Trigger: TGAGACAAACAGCATTCCCTTTACAGGACTATGCAAGGGCTTTGTTAGTCTTCCAGATAAGGCCTCTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | TGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATaGCTACTTTACACTCTGTTCCCAAAAGACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGITSTKRS*LLYTLFPKDLD Trigger: ATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | GTCAATGTCACACTACTTTGTGGTTTAGCTACACTCTaGCAAAGTCCAGAGAAGATCTGCCAAAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VNVTLLCGLATL*QSPEKICQRSI Trigger: GATGGACCTTTGGCAGATCTTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | ATTGCTACTTTACACTCTGTTCCCAAAAGACTTGGATaGGGAACAGTCTCCACAGTAGACTCCCAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IATLHSVPKRLG*GTVSTVDSQCS Trigger: ACTGCATTGGGAGTCTACTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | ACAAGTACCACCTACAAGTCATTGAGCCTCAAAGTCTaGAAAGACACAGTTACAACGGTCACCTTAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSTTYKSLSLKV*KDTVTTVTLGC Trigger: ACATCCTAAGGTGACCGTTGTAACTGTGTCTTTCAAGACTTTGAGGCTCAATGACTTGTAGGTGGTACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAAGTGTCAATGTCACACTACTTTGTGGTTTAGCTACACTCTTGCAAAGTTCCAGCAACATAAAATaGCCAGATGCCCATGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRSVNVTLLCGLATLLQSSSNIK*PDAHEH Trigger: GTGCTCATGGGCATCTGGGCATTTTATGTTGCTGGA...ACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAAGTGTCAATGTCACACTACTTTGTGGTTTAGCTACACTCTTGCAAAGTAGCCTGAACAGCTCTTaGATACAGACAGAGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: MRSVNVTLLCGLATLLQSSLNSS*IQTESN Trigger: GTTGCTCTCTGTCTGTATCCAAGAGCTGTTCAGGCT...ACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | AGGCAAACTGCTGAAGATGAAAAGTTACATGCCAGCTaGAAATCTGGCAGCTTAAGGTCTATCTCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQTAEDEKLHAS*KSGSLRSISNF Trigger: AAAGTTGGAGATAGACCTTAAGCTGCCAGATTTCAAGCTGGCATGTAACTTTTCATCTTCAGCAGTTTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | ACAGTAGCAAATGAGAAGTGTCAATGTCACACTACTTaGTGGTTTAGCTACACTCTTGCAAAGTCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVANEKCQCHTT*WFSYTLAKSRE Trigger: TTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCATTTGCTACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | TCCTTGAACATATCCATAATTGCTGTTTTGAAGTCCTaGCCTGATGATTCAGCTAAATTGGATTTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNISIIAVLKS*PDDSAKLDFLG Trigger: CCCCAAGAAATCCAATTTAGCTGAATCATCAGGCAAGGACTTCAAAACAGCAATTATGGATATGTTCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| 3UTR CAA 72 bp | AAGTCCTTGCCTGATGATTCAGCTAAATTGGATTTCTaGGGGCCTATTACAATATGGTTACTAACTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSLPDDSAKLDF*GPITIWLLTSK Trigger: TTTAGAAGTTAGTAACCATATTGTAATAGGCCCCAAGAAATCCAATTTAGCTGAATCATCAGGCAAGGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS GCA 90 bp | TCCAAAGCCCAAGCCAGAAACATACGCCAACAGTCGCATCGAGGGTaGTATGTCCTCCTCCGGGTTTATGCTTTTCAAACCCTCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKAQARNIRQQSHRG*YVLLRVYAFQTLTG Trigger: GCCAGTGAGGGTTTGAAAAGCATAAACCCGGAGGAGGACATAGCACCCTCGATGCGACTGTTGGCGTATGTTTCTGGCTTGGGCTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057261.9 ENSMUST00000169282.8 |
||
| CDS CCA 90 bp | ATTAAGGAAGAACTGAGGAGAATCACCATGAATGCCCACTGTGCCTaGCCCCAAGGAGTTAGACAGGGTGTTCACAAAGGAAAACACTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKEELRRITMNAHCA*PQGVRQGVHKGKHS Trigger: GGAGTGTTTTCCTTTGTGAACACCCTGTCTAACTCCTTGGGGCCAGGCACAGTGGGCATTCATGGTGATTCTCCTCAGTTCTTCCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057261.9 ENSMUST00000169282.8 |
||
| CDS-3UTR CAA 90 bp | GACAAGGGCTACGCTGGTTACCACATTCAGATATTTACTTGCTCAGCTGAAGTTGAGCCTGAACAGCTCTaGGATACAGACAGAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DKGYAGYHIQIFTCSAEVEPEQL*DTDREQ Trigger: TTGCTCTCTGTCTGTATCCAAGAGCTGTTCAGGCTC...AACTTCAGCTGAGCAAGTAAATATCTGAATGTGGTAACCAGCGTAGCCCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAATGTCACACTACTTTGTGGTTTAGCTACACTCTTGCAAAGTCCAGAGAAAAGAAAATCCTTGTCTaGGCAGAGCAGGCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: CQCHTTLWFSYTLAKSREKKILV*AEQAEF Trigger: AAATTCTGCCTGCTCTGCCAAGACAAGGATTTTCTT...TTCTCTGGACTTTGCAAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCATTATAGATGGCTACGAGCTACCATGTGTTTGCTGGAAATTGAACTCAACTGATTCATCTCTGTaGTTAGTAATGACTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ELIIDGYELPCVCWKLNSTDSSL*LVMTLT Trigger: AGTGAGAGTCATTACTAACAACAGAGATGAATCAGT...TGAGTTCAATTTCCAGCAAACACATGGTAGCTCGTAGCCATCTATAATGAGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169282.8 |
||
| CDS CCA 72 bp | GAACTGAGGAGAATCACCATGAATGCCCACTGTGCCTaGCCCCAAGGAGTTAGACAGGGTGTTCACAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ELRRITMNAHCA*PQGVRQGVHKG Trigger: TCCTTTGTGAACACCCTGTCTAACTCCTTGGGGCCAGGCACAGTGGGCATTCATGGTGATTCTCCTCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057261.9 ENSMUST00000169282.8 |
||