Pregenerated sensors for APH1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032375Ensembl transcript IDs: ENSMUST00000034934.15, ENSMUST00000113730.3, ENSMUST00000168309.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCAGCCAGGCTGCAGGCTACACTGCAGCTCTTCCAGAGGCTGCTaGATGAAAGCACAGGACAGTTCCAGGCTGGACAGTTCTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: VQPGCRLHCSSSRGC*MKAQDSSRLDSSVA Trigger: AGCCACAGAACTGTCCAGCCTGGAACTGTCCTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | GTTTCCCCAGATGCTTCAAATGTGCAGCCAGGCTGCAGGCTACACTaGAGCTCTTCCAGAGGCTGCTGCATGAAAGCACAGGACAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: VSPDASNVQPGCRLH*SSSRGCCMKAQDSS Trigger: GGAACTGTCCTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | GAAGCCCAGAAGCATCAATCCTTGTTTCCCCAGATGCTTCAAATGTaGAGCCAGGCTGCAGGCTACACTGCAGCTCTTCCAGAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: EAQKHQSLFPQMLQM*SQAAGYTAALPEAA Trigger: AGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGATTGATGCTTCTGGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | TCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTTATAGACAGTaGACATGTGTGCTGGGATCACCAAGGCATCACTTCCACCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SLPNPLTAAPGSYRQ*TCVLGSPRHHFHQE Trigger: CTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACATGTGCACTGTCTATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | ACCCTCTCACTGCTGCCCCTGGTTCTTATAGACAGTGCACATGTGTaGTGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATTGCTA | + |
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Preference number: 1 (lower is better) Translates to: TLSLLPLVLIDSAHV*WDHQGITSTKRSLL Trigger: TAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACATGTGCACTGTCTATAAGAACCAGGGGCAGCAGTGAGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | CCCAAAAGACTTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATaGAGTAGCATTCCTCTTACAGAGGAAGCCAGAGGCCTTATCTGG | + |
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Preference number: 1 (lower is better) Translates to: PKRLGLGTVSTADSQ*SSIPLTEEARGLIW Trigger: CCAGATAAGGCCTCTGGCTTCCTCTGTAAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | ATGTGTGCTGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATTaGTACTTTACACTCTGTTCCCAAAAGACTTGGATTGGGAACAGT | + |
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Preference number: 1 (lower is better) Translates to: MCAGITKASLPPRGH*YFTLCSQKTWIGNS Trigger: ACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CCA 90 bp | AAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTTGGATTaGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTC | + |
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Preference number: 1 (lower is better) Translates to: KRSLLLYTLFPKDLD*EQSPQQTPNAVAFL Trigger: GAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CCA 90 bp | CTCAGGGAGGAACACATCCCAGCCCTGTGGGCATCTTCTTGTTCTTaGCTCTGTAAAGTGAAGTTTACTGTTTGCTTTCTATGTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: LREEHIPALWASSCS*LCKVKFTVCFLCLC Trigger: ACAAAGACATAGAAAGCAAACAGTAAACTTCACTTTACAGAGCCAAGAACAAGAAGATGCCCACAGGGCTGGGATGTGTTCCTCCCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR TCA 90 bp | TTGGTTCTGTTTTTGAATATGTATGGTCCTGCCTGTGTGGGCATATaGATACAGTCGCAGTTGAAGGCCAGATGCATTGGATCTCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: LVLFLNMYGPACVGI*IQSQLKARCIGSPR Trigger: TCTAGGAGATCCAATGCATCTGGCCTTCAACTGCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | CATCAATTAAGGTTTAGTTCCTGGGTAATTCATCTTAAGTGTCACTaGCAAACCCTCTCACTGCTGCCCCTGGTTCTTATAGACAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: HQLRFSSWVIHLKCH*QTLSLLPLVLIDSA Trigger: TGCACTGTCTATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAATTACCCAGGAACTAAACCTTAATTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR GCA 90 bp | TTCCTTCTCATGTGTGTTGGTTCTGTTTTTGAATATGTATGGTCCTaGCTGTGTGGGCATATGAATACAGTCGCAGTTGAAGGCCAGATG | + |
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Preference number: 1 (lower is better) Translates to: FLLMCVGSVFEYVWS*LCGHMNTVAVEGQM Trigger: CATCTGGCCTTCAACTGCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAACACACATGAGAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CCA 90 bp | GCAAATTTCCTTCTCATGTGTGTTGGTTCTGTTTTTGAATATGTATaGTCCTGCCTGTGTGGGCATATGAATACAGTCGCAGTTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ANFLLMCVGSVFEYV*SCLCGHMNTVAVEG Trigger: GCCTTCAACTGCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAACACACATGAGAAGGAAATTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CCA 90 bp | AAAAGCTATCTTCTGAGCAGTCTGAAGACACTGTCCTCACTTCCCTaGAGCACATTTCATCAAGATGTTCTGAAAATGTCACTACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: KSYLLSSLKTLSSLP*STFHQDVLKMSLLL Trigger: CAGCAGTAGTGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGAAGATAGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR TCA 90 bp | GTTTCACTAGGCAAATTTCCTTCTCATGTGTGTTGGTTCTGTTTTTaGATATGTATGGTCCTGCCTGTGTGGGCATATGAATACAGTCGC | + |
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Preference number: 1 (lower is better) Translates to: VSLGKFPSHVCWFCF*ICMVLPVWAYEYSR Trigger: GCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAACACACATGAGAAGGAAATTTGCCTAGTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CCA 90 bp | AATATTTTAAGCATGGTGGAAGTTCATCAATTAAGGTTTAGTTCCTaGGTAATTCATCTTAAGTGTCACTGCCAAACCCTCTCACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: NILSMVEVHQLRFSS*VIHLKCHCQTLSLL Trigger: CAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAATTACCCAGGAACTAAACCTTAATTGATGAACTTCCACCATGCTTAAAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CCA 90 bp | GTGGCTTATGTGAAATTACAACTGAATCTATCCCGGCTATTCACATaGTCAATGCATCTCTGTTACTCAAGCACTAAAACAATATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: VAYVKLQLNLSRLFT*SMHLCYSSTKTIFK Trigger: TTTGAATATTGTTTTAGTGCTTGAGTAACAGAGATGCATTGACCATGTGAATAGCCGGGATAGATTCAGTTGTAATTTCACATAAGCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTAGCCCGGCAAGCGAAAGGACAGACAGGTGGACACACCTCCAGTGAAGAGAGCTCTTCCAGAGGCTaGTGCATGAAAGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLARQAKGQTGGHTSSEESSSRG*CMKAQD Trigger: GTCCTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCT...CTCTTCACTGGAGGTGTGTCCACCTGTCTGTCCTTTCGCTTGCCGGGCTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCACCCATTGGACCCCAGTaGCTCTCAGCTGTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSPIGPQ*LSAVLH Trigger: GTGCAGGACAGCTGAGAGTCACTGGGGTCCAATGGG...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAGCCCGGCAAGCGAAAGGACAGACAGGTGGACACACCTCCAGTGAAGAGCCAAAAGACTTGGATTaGGAACAGTCTCCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLARQAKGQTGGHTSSEEPKDLD*EQSPQQ Trigger: CTGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGG...CTCTTCACTGGAGGTGTGTCCACCTGTCTGTCCTTTCGCTTGCCGGGCTAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTCTTAGGCTGCAGGCTACACTaGAGCTCTTCCAGAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LDWEQSPQQTPNAVAFLLGCRLH*SSSRGC Trigger: GCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCC...TAAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCACCAGAGGCTGCTGCATaGAAGCACAGGACAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSPEAAA*KHRTVP Trigger: TGGAACTGTCCTGTGCTTTCATGCAGCAGCCTCTGG...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAATAAGAGCAGCACTTCAATGTGTATGTGTAAGACTCCACCTCCCTCAGGCCCCATTGGACCCCAGTaGCTCTCAGCTGTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: INKSSTSMCMCKTPPPSGPIGPQ*LSAVLH Trigger: GTGCAGGACAGCTGAGAGTCACTGGGGTCCAATGGG...GCCTGAGGGAGGTGGAGTCTTACACATACACATTGAAGTGCTGCTCTTATTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCATGTGTGCTTAGCCAGTaGGCCATCTTCCCAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSCVLSQ*AIFPAI Trigger: AATGGCTGGGAAGATGGCTCACTGGCTAAGCACACA...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | GAACAAAAGCTATCTTCTGAGCAGTCTGAAGACACTGTCCTCACTTCCCTGGAGAATGTGCAGCCAGGCTaGAGGCTACACTGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: EQKLSSEQSEDTVLTSLENVQPG*RLHCSS Trigger: AGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATT...CTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGAAGATAGCTTTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACAGAAGTGGTTGTGAGCTaGTCAAAGGGGGTTCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTEVVVS*SKGVLG Trigger: TCCAAGAACCCCCTTTGAGCAGCTCACAACCACTTC...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CAA 90 bp | ACATCCAGGATAATCAAGTCTGGAGAAGCCCAGAAGCATCAATCCTaGTTTCCCCAGATGCTTCAAATGTGCAGCCAGGCTGCAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: TSRIIKSGEAQKHQS*FPQMLQMCSQAAGY Trigger: GTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGATTGATGCTTCTGGGCTTCTCCAGACTTGATTATCCTGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCATCTTAAGTGTCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTTATACCAGAGGCTGCTGCATaGAAGCACAGGACAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: IHLKCHCQTLSLLPLVLIPEAAA*KHRTVP Trigger: TGGAACTGTCCTGTGCTTTCATGCAGCAGCCTCTGG...TATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCATGGACACACCTCCAGTaGAGAGCACTGGTTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSWTHLQ*RALVQT Trigger: TGTTTGAACCAGTGCTCTTCACTGGAGGTGTGTCCA...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCAGTCTGAAGACACTGTCCTCACTTCCCTGGAGCACATTTCATCAAGAAGCTCTTCCAGAGGCTaGTGCATGAAAGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SEQSEDTVLTSLEHISSRSSSRG*CMKAQD Trigger: GTCCTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCT...TCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | GAACAAAAGCTATCTTCTGAGCAGTCTGAAGACACTGTCCTCACTTCCCTGGAGCAGATGCTTCAAATGTaGAGCCAGGCTGCAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: EQKLSSEQSEDTVLTSLEQMLQM*SQAAGY Trigger: GTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTG...CTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGAAGATAGCTTTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTCTTCCTTGTTTCCCCAGATaGTTCAAATGTGCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGLGTVSTADSQCSSIPLPCFPR*FKCAAR Trigger: CCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGG...AAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCTGGACAGTGCACATGTGTaGTGGGATCACCAAGGCATC | + |
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Preference number: 2 (lower is better) Translates to: RGIGPEAGSSGKMISINLDSAHV*WDHQGI Trigger: GATGCCTTGGTGATCCCAGCACACATGTGCACTGTC...CAGGTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCAATGGTCCTGCCTGTGTaGGCATATGAATACAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSMVLPV*AYEYSR Trigger: GCGACTGTATTCATATGCCCACACAGGCAGGACCAT...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACAAAGACACAGGCTGCTaGTTAGAGGTGCTGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: LRGIGPEAGSSGKMISINKDTGC*LEVLMV Trigger: GACCATCAGCACCTCTAAGCAGCAGCCTGTGTCTTT...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CAA 90 bp | CATGTGTGCTGGGATCACCAAGGCATCACTTCCACCAAGAGGTCATaGCTACTTTACACTCTGTTCCCAAAAGACTTGGATTGGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: HVCWDHQGITSTKRS*LLYTLFPKDLDWEQ Trigger: CTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCCAGCACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCATTCTCAGGTTCTCCATaGCTCGGACAAGCAAACATT | + |
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Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSFSGSP*LGQANI Trigger: AATGTTTGCTTGTCCGAGGCATGGAGAACCTGAGAA...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTCTTACACTGAACAGCTTTTaGGTGTTTTCTCGAACTCCC | + |
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Preference number: 2 (lower is better) Translates to: LGLGTVSTADSQCSSIPLTLNSF*VFSRTP Trigger: GGGAGTTCGAGAAAACACCCAAAAGCTGTTCAGTGT...AAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCCAAAAGACTTGGATTaGGAACAGTCTCCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRGIGPEAGSSGKMISINPKDLD*EQSPQQ Trigger: CTGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGG...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR CCA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACACACAGAAAACCTGTGTaGAACACAGCATACAACATC | + |
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Preference number: 2 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTHRKPV*NTAYNI Trigger: GATGTTGTATGCTGTGTTCCACACAGGTTTTCTGTG...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CAA 90 bp | CCAGAACCCAGGCGAACTGCTGAAGATGAAAAGTTCCATGCCAGCTaGAAATTTGGTCTATCTCCAACTTTACCCTGTACCATTAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PEPRRTAEDEKFHAS*KFGLSPTLPCTIRV Trigger: CACCCTAATGGTACAGGGTAAAGTTGGAGATAGACCAAATTTCAAGCTGGCATGGAACTTTTCATCTTCAGCAGTTCGCCTGGGTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | TTAATAAGAGCAGCACTTCAATGTGTATGTGTAAGACTCCACCTCCCTCAGGCTCCTTGTTTCCCCAGATaGTTCAAATGTGCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LIRAALQCVCVRLHLPQAPCFPR*FKCAAR Trigger: CCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGG...AGCCTGAGGGAGGTGGAGTCTTACACATACACATTGAAGTGCTGCTCTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCCACCAAGAGGTCATTaGTACTTTACACTCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LRGIGPEAGSSGKMISINPPRGH*YFTLCS Trigger: GGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGG...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACTTCTCAGGTTCTCCATaGCTCGGACAAGCAAACATT | + |
|
Preference number: 2 (lower is better) Translates to: LRGIGPEAGSSGKMISINFSGSP*LGQANI Trigger: AATGTTTGCTTGTCCGAGGCATGGAGAACCTGAGAA...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACACACCTCCAGTGAAGAGCACTGGTTCAAACAAACTAAGGATAAATGTGGCCAGTTGAAGGCCAGATaGATTGGATCTCCTAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GHTSSEEHWFKQTKDKCGQLKAR*IGSPRA Trigger: AGCTCTAGGAGATCCAATGCATCTGGCCTTCAACTG...GCCACATTTATCCTTAGTTTGTTTGAACCAGTGCTCTTCACTGGAGGTGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCAGAATATGTATGGTCCTaGCTGTGTGGGCATATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSEYVWS*LCGHMN Trigger: ATTCATATGCCCACACAGGCAGGACCATACATATTC...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTCTTAACACTGAACAGCTTTTaGGTGTTTTCTCGAACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LDWEQSPQQTPNAVAFLLTLNSF*VFSRTP Trigger: GGGAGTTCGAGAAAACACCCAAAAGCTGTTCAGTGT...TAAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CAA 90 bp | ATAATGTTTTTGCTGTCCATTGGGAAAAACACAGGCCTGGAAGGTTaGCTGCTACAGGTCATAAAGGCAGGTCATACGGGTCATAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IMFLLSIGKNTGLEG*LLQVIKAGHTGHKG Trigger: CCCTTTATGACCCGTATGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCAATGGACAGCAAAAACATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCATCTTAAGTGTCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTTATACAGCCCTGGAGTCTGTaGCATCAGTACATAAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IHLKCHCQTLSLLPLVLIQPWSL*HQYIKR Trigger: TCTTTTTATGTACTGATGTCACAGACTCCAGGGCTG...TATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACCACAGGCAAACAAGGACTATTCAATAATTCAACTGAGTTTCACTAGGCAAAATGTGCAGCCAGGCTaGAGGCTACACTGCAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QPQANKDYSIIQLSFTRQNVQPG*RLHCSS Trigger: AGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATT...TTGCCTAGTGAAACTCAGTTGAATTATTGAATAGTCCTTGTTTGCCTGTGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCACTTCCACCAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTCATCTTAAGTGTCACTaGCAAACCCTCTCACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASLPPRGHCYFTLCSQKTHLKCH*QTLSLL Trigger: CAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATG...AGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACGAATATGTATGGTCCTaGCTGTGTGGGCATATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LRGIGPEAGSSGKMISINEYVWS*LCGHMN Trigger: ATTCATATGCCCACACAGGCAGGACCATACATATTC...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCAGCACTCACAGTATAAGAACAACCACAGGCAAACAAGGACTATTCAATTCCGGCAACATAAAATaGCCAGATGCCCATGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HSSTHSIRTTTGKQGLFNSGNIK*PDAHEH Trigger: GTGCTCATGGGCATCTGGGCATTTTATGTTGCCGGA...ATTGAATAGTCCTTGTTTGCCTGTGGTTGTTCTTATACTGTGAGTGCTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTCTTTGCCAGCTTGAAATTTaGTCTATCTCCAACTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: LGLGTVSTADSQCSSIPLCQLEI*SISNFT Trigger: GGTAAAGTTGGAGATAGACCAAATTTCAAGCTGGCA...AAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACACACCTCCAGTGAAGAGCACTGGTTCAAACAAACTAAGGATAAATGTGGCAGTTCCATGCCAGCTTaGAATTTGGTCTATCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GHTSSEEHWFKQTKDKCGSSMPA*NLVYLQ Trigger: TTGGAGATAGACCAAATTTCAAGCTGGCATGGAACT...GCCACATTTATCCTTAGTTTGTTTGAACCAGTGCTCTTCACTGGAGGTGTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCATCTTAAGTGTCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTTATAGTCCTGAAAAGGGAATaGTGTTTGTCTCACAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: IHLKCHCQTLSLLPLVLIVLKRE*CLSHSN Trigger: GTTACTGTGAGACAAACAGCATTCCCTTTTCAGGAC...TATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCATATTCACATGGTCAATaGATCTCTGTTACTCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: WEKHRPGRFAATGHKGRSYSHGQ*ISVTQA Trigger: TGCTTGAGTAACAGAGATGCATTGACCATGTGAATA...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACACAAGGAACATCTTTGTaGCAAATTGATTCTGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTQGTSL*QIDSEY Trigger: GTATTCAGAATCAATTTGGCACAAAGATGTTCCTTG...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATTCACTTCATAATAAGGACTTAGAAAAGTCTGGGTGGACACCACCAGATGGCTGGACAGTTCTGTaGCTTCCAAGTTCCAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: PDSLHNKDLEKSGWTPPDGWTVL*LPSSKI Trigger: TATCTTGGAACTTGGAAGCCACAGAACTGTCCAGCC...ATCTGGTGGTGTCCACCCAGACTTTTCTAAGTCCTTATTATGAAGTGAATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAATAAGAGCAGCACTTCAATGTGTATGTGTAAGACTCCACCTCCCTCAGGCTGTCCTGAAAAGGGAATaGTGTTTGTCTCACAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LIRAALQCVCVRLHLPQAVLKRE*CLSHSN Trigger: GTTACTGTGAGACAAACAGCATTCCCTTTTCAGGAC...AGCCTGAGGGAGGTGGAGTCTTACACATACACATTGAAGTGCTGCTCTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACAAAAGCTATCTTCTGAGCAGTCTGAAGACACTGTCCTCACTTCCCTGGAGGCATCTTCTTGTTCTTaGCTCTGTAAAGTGAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: EQKLSSEQSEDTVLTSLEASSCS*LCKVKF Trigger: AAACTTCACTTTACAGAGCCAAGAACAAGAAGATGC...CTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGAAGATAGCTTTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTGTCCTCACTTCCCTGGAGCACATTTCATCAAGATGTTCTGAAAATGTCATGTCACAGTAGCAAATaGGAAGTGTCAATGTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: TLSSLPWSTFHQDVLKMSCHSSK*EVSMSH Trigger: GTGTGACATTGACACTTCTCATTTGCTACTGTGACA...TGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGAACACAGCATACAACATCCAGGCTACTCCTTTTCAATTATTAATAAGAAAAGACACAGGCTGCTaGTTAGAGGTGCTGATGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VWNTAYNIQATPFQLLIRKDTGC*LEVLMV Trigger: GACCATCAGCACCTCTAAGCAGCAGCCTGTGTCTTT...TCTTATTAATAATTGAAAAGGAGTAGCCTGGATGTTGTATGCTGTGTTCCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACGACAGTGCACATGTGTaGTGGGATCACCAAGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYDSAHV*WDHQGI Trigger: GATGCCTTGGTGATCCCAGCACACATGTGCACTGTC...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACCAGAGAAATGATACATaGGTTGTGGGTTGTAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: LRGIGPEAGSSGKMISINQRNDT*VVGCKL Trigger: TAATTTACAACCCACAACGCATGTATCATTTCTCTG...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTAATAAGAGCAGCACTTCAATGTGTATGTGTAAGACTCCACCTCCCTCAGGCTGTCACACTACTTTGTaGTTTAGCTACACTCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: INKSSTSMCMCKTPPPSGCHTTL*FSYTLT Trigger: TGTGAGAGTGTAGCTAAACCACAAAGTAGTGTGACA...GCCTGAGGGAGGTGGAGTCTTACACATACACATTGAAGTGCTGCTCTTATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CAA 90 bp | TTTGGTGTCACAGTAGCAAATGAGAAGTGTCAATGTCACACTACTTaGTGGTTTAGCTACACTCTCACAAAGAGAAGATCTCCCAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FGVTVANEKCQCHTT*WFSYTLTKRRSPKG Trigger: ACCTTTGGGAGATCTTCTCTTTGTGAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCATTTGCTACTGTGACACCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTGTCCTCACTTCCCTGGAGCACATTTCATCAAGATGTTCTGAAAATGTCATGTTGGTTCTGTTTTTaGATATGTATGGTCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLSSLPWSTFHQDVLKMSCWFCF*ICMVLP Trigger: AGGCAGGACCATACATATTCAAAAACAGAACCAACA...TGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTTGCTTTCTATGTCTTTGTCCTTCTAGTCCAGGGGAAATCTTATATGAACATCTTAAGTGTCACTaGCAAACCCTCTCACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TVCFLCLCPSSPGEILYEHLKCH*QTLSLL Trigger: CAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATG...TTCATATAAGATTTCCCCTGGACTAGAAGGACAAAGACATAGAAAGCAAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTTTGCTTTCTATGTCTTTGTCCTTCTAGTCCAGGGGAAATCTTATATGAAGGCTGGACAGTTCTGTaGCTTCCAAGTTCCAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: TVCFLCLCPSSPGEILYEGWTVL*LPSSKI Trigger: TATCTTGGAACTTGGAAGCCACAGAACTGTCCAGCC...TTCATATAAGATTTCCCCTGGACTAGAAGGACAAAGACATAGAAAGCAAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGCAGCACTCACAGTATAAGAACAACCACAGGCAAACAAGGACTATTCAATAATACAGGTTCTACATaGACCTTACCTTGGCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HSSTHSIRTTTGKQGLFNNTGST*TLPWLS Trigger: ACTTAGCCAAGGTAAGGTCCATGTAGAACCTGTATT...ATTGAATAGTCCTTGTTTGCCTGTGGTTGTTCTTATACTGTGAGTGCTGCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACAGTGCACATGTGTGCTaGGATCACCAAGGCATCACT | + |
|
Preference number: 2 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYSAHVC*DHQGIT Trigger: AGTGATGCCTTGGTGATCCCAGCACACATGTGCACT...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATCAATTAAGGTTTAGTTCCTGGGTAATTCATCTTAAGTGTCACTGCCAACAGCCCTGGAGTCTGTaGCATCAGTACATAAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VHQLRFSSWVIHLKCHCQQPWSL*HQYIKR Trigger: TCTTTTTATGTACTGATGTCACAGACTCCAGGGCTG...TTGGCAGTGACACTTAAGATGAATTACCCAGGAACTAAACCTTAATTGATGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCAATTAAGGTTTAGTTCCTGGGTAATTCATCTTAAGTGTCACTGCCAAACCTGTCACAGTAGCAAATaGGAAGTGTCAATGTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: HQLRFSSWVIHLKCHCQTCHSSK*EVSMSH Trigger: GTGTGACATTGACACTTCTCATTTGCTACTGTGACA...GGTTTGGCAGTGACACTTAAGATGAATTACCCAGGAACTAAACCTTAATTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCACTTCCACCAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTGGAATCCAAAGAAATTaGACTGCTAATTTCTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: ASLPPRGHCYFTLCSQKTGIQRN*TANFFQ Trigger: TTGGAAGAAATTAGCAGTGCAATTTCTTTGGATTCC...AGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTTTGCTTTCTATGTCTTTGTCCTTCTAGTCCAGGGGAAATCTTATATGAAGGTTCTTATAGACAGTaGACATGTGTGCTGGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: TVCFLCLCPSSPGEILYEGSYRQ*TCVLGS Trigger: TGATCCCAGCACACATGTGCACTGTCTATAAGAACC...TTCATATAAGATTTCCCCTGGACTAGAAGGACAAAGACATAGAAAGCAAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CAA 90 bp | ATAATTCAACTGAGTTTCACTAGGCAAATTTCCTTCTCATGTGTGTaGGTTCTGTTTTTGAATATGTATGGTCCTGCCTGTGTGGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: IIQLSFTRQISFSCV*VLFLNMYGPACVGI Trigger: TATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAACACACATGAGAAGGAAATTTGCCTAGTGAAACTCAGTTGAATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGGAACACAGCATACAACATCCAGGCTACTCCTTTTCAATTATTAATAAGATTAGAAGACCAACACTaGACAGCTTTTGGGTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VWNTAYNIQATPFQLLIRLEDQH*TAFGCF Trigger: AAAACACCCAAAAGCTGTTCAGTGTTGGTCTTCTAA...TCTTATTAATAATTGAAAAGGAGTAGCCTGGATGTTGTATGCTGTGTTCCACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACCACAGAAAACCTGTGTaGAACACAGCATACAACATC | + |
|
Preference number: 2 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYHRKPV*NTAYNI Trigger: GATGTTGTATGCTGTGTTCCACACAGGTTTTCTGTG...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACTTCATCAAGATGTTCTaGAAATGTCACTACTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYFIKMF*KCHYCC Trigger: GCAGCAGTAGTGACATTTTCAGAACATCTTGATGAA...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACCACAGGCAAACAAGGACTATTCAATAATTCAACTGAGTTTCACTAGGCAAGGAATCCAAAGAAATTaGACTGCTAATTTCTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: QPQANKDYSIIQLSFTRQGIQRN*TANFFQ Trigger: TTGGAAGAAATTAGCAGTGCAATTTCTTTGGATTCC...TTGCCTAGTGAAACTCAGTTGAATTATTGAATAGTCCTTGTTTGCCTGTGGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACTGCCAGCTTGAAATTTaGTCTATCTCCAACTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYCQLEI*SISNFT Trigger: GGTAAAGTTGGAGATAGACCAAATTTCAAGCTGGCA...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | GGCTGCAGGCTACACTGCAGCTCTTCCAGAGGCTGCTaGATGAAAGCACAGGACAGTTCCAGGCTGGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GCRLHCSSSRGC*MKAQDSSRLDS Trigger: ACTGTCCAGCCTGGAACTGTCCTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | CTTGTTTCCCCAGATGCTTCAAATGTGCAGCCAGGCTaGAGGCTACACTGCAGCTCTTCCAGAGGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVSPDASNVQPG*RLHCSSSRGCC Trigger: GCAGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | GATGCTTCAAATGTGCAGCCAGGCTGCAGGCTACACTaGAGCTCTTCCAGAGGCTGCTGCATGAAAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: DASNVQPGCRLH*SSSRGCCMKAQ Trigger: CTGTGCTTTCATGCAGCAGCCTCTGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | AACTCCCCATTGGACCCCAGTGACTCTCAGCTGTCCTaGACATCCAGGATAATCAAGTCTGGAGAAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NSPLDPSDSQLS*TSRIIKSGEAQ Trigger: CTGGGCTTCTCCAGACTTGATTATCCTGGATGTGCAGGACAGCTGAGAGTCACTGGGGTCCAATGGGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | GAGAAGCCCAGAAGCATCAATCCTTGTTTCCCCAGATaGTTCAAATGTGCAGCCAGGCTGCAGGCTACACTG | + |
|
Preference number: 3 (lower is better) Translates to: EKPRSINPCFPR*FKCAARLQATL Trigger: CAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGATTGATGCTTCTGGGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | CTTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATaGAGTAGCATTCCTCTTACAGAGGAAGCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGLGTVSTADSQ*SSIPLTEEARG Trigger: GCCTCTGGCTTCCTCTGTAAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | AACCCTCTCACTGCTGCCCCTGGTTCTTATAGACAGTaGACATGTGTGCTGGGATCACCAAGGCATCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: NPLTAAPGSYRQ*TCVLGSPRHHF Trigger: GAAGTGATGCCTTGGTGATCCCAGCACACATGTGCACTGTCTATAAGAACCAGGGGCAGCAGTGAGAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACAGCTCAAAGGGGGTTCTaGGAACTGAACTTGGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTAQRGF*ELNLDP Trigger: AGGATCCAAGTTCAGTTCCAAGAACCCCCTTTGAGC...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR TCA 72 bp | CAAACCCATCCACAGACAGAACAGCCCTGGAGTCTGTaGCATCAGTACATAAAAAGACAGGGGCTACGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QTHPQTEQPWSL*HQYIKRQGLRW Trigger: CCAGCGTAGCCCCTGTCTTTTTATGTACTGATGTCACAGACTCCAGGGCTGTTCTGTCTGTGGATGGGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | AAGCATCAATCCTTGTTTCCCCAGATGCTTCAAATGTaGAGCCAGGCTGCAGGCTACACTGCAGCTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KHQSLFPQMLQM*SQAAGYTAALP Trigger: TGGAAGAGCTGCAGTGTAGCCTGCAGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGATTGATGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR TCA 72 bp | CCTCACTTCCCTGGAGCACATTTCATCAAGATGTTCTaGAAATGTCACTACTGCTGCACTGCTAGCCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PHFPGAHFIKMF*KCHYCCTASPA Trigger: TGCCGGGCTAGCAGTGCAGCAGTAGTGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CCA 72 bp | CTCTCAGCTGTCCTGCACATCCAGGATAATCAAGTCTaGAGAAGCCCAGAAGCATCAATCCTTGTTTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSAVLHIQDNQV*RSPEASILVSP Trigger: TGGGGAAACAAGGATTGATGCTTCTGGGCTTCTCCAGACTTGATTATCCTGGATGTGCAGGACAGCTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGCAGTAGCATTCCTCTTACAGAGGAAGCCAGAGGCCTTATCTGGAAGACTACCCAAAAGACTTGGATaGGGAACAGTCTCCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NAVAFLLQRKPEALSGRLPKRLG*GTVSTA Trigger: TGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGG...TAGTCTTCCAGATAAGGCCTCTGGCTTCCTCTGTAAGAGGAATGCTACTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACAGTGTTGGTTCTGTTTTaGAATATGTATGGTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTVLVLF*NMYGPA Trigger: GGCAGGACCATACATATTCAAAAACAGAACCAACAC...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGATTGGGAACAGTCTCCACAGCAGACTCCCAATGCAGTAGCATTCCTCTTAAACACTGAACAGCTTTaGGGTGTTTTCTCGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LDWEQSPQQTPNAVAFLLNTEQL*GVFSNS Trigger: GGAGTTCGAGAAAACACCCAAAAGCTGTTCAGTGTT...TAAGAGGAATGCTACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCAAAGTTCCATGCCAGCTaGAAATTTGGTCTATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: WEKHRPGRFAATGHKGRSKFHAS*KFGLSP Trigger: TGGAGATAGACCAAATTTCAAGCTGGCATGGAACTT...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACACACCTCCAGTGAAGAGCACTGGTTCAAACAAACTAAGGATAAATGTGGCCTGTTCCCAAAAGACTaGGATTGGGAACAGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GHTSSEEHWFKQTKDKCGLFPKD*DWEQSP Trigger: TGGAGACTGTTCCCAATCCAAGTCTTTTGGGAACAG...GCCACATTTATCCTTAGTTTGTTTGAACCAGTGCTCTTCACTGGAGGTGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGTCCTCACTTCCCTGGAGCACATTTCATCAAGATGTTCTGAAAATGTCAGCTCAAAGGGGGTTCTaGGAACTGAACTTGGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLSSLPWSTFHQDVLKMSAQRGF*ELNLDP Trigger: AGGATCCAAGTTCAGTTCCAAGAACCCCCTTTGAGC...TGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | GGGATCACCAAGGCATCACTTCCACCAAGAGGTCATTaGTACTTTACACTCTGTTCCCAAAAGACTTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: GITKASLPPRGH*YFTLCSQKTWI Trigger: AATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGCCTTGGTGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | AGGTTTAGTTCCTGGGTAATTCATCTTAAGTGTCACTaGCAAACCCTCTCACTGCTGCCCCTGGTTCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: RFSSWVIHLKCH*QTLSLLPLVLI Trigger: TATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAATTACCCAGGAACTAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CCA 72 bp | TTGCTACTTTACACTCTGTTCCCAAAAGACTTGGATTaGGAACAGTCTCCACAGCAGACTCCCAATGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLLYTLFPKDLD*EQSPQQTPNAV Trigger: TACTGCATTGGGAGTCTGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGGAACAGAGTGTAAAGTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACACACCTCCAGTGAAGAGCACTGGTTCAAACAAACTAAGGATAAATGTGGCAAAAGGGAATGCTGTTaGTCTCACAGTAACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GHTSSEEHWFKQTKDKCGKRECC*SHSNQN Trigger: GTTCTGGTTACTGTGAGACAAACAGCATTCCCTTTT...GCCACATTTATCCTTAGTTTGTTTGAACCAGTGCTCTTCACTGGAGGTGTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR TCA 72 bp | GGCGAACTGCTGAAGATGAAAAGTTCCATGCCAGCTTaGAATTTGGTCTATCTCCAACTTTACCCTGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GELLKMKSSMPA*NLVYLQLYPVP Trigger: TGGTACAGGGTAAAGTTGGAGATAGACCAAATTTCAAGCTGGCATGGAACTTTTCATCTTCAGCAGTTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR TCA 72 bp | TTTTTGAATATGTATGGTCCTGCCTGTGTGGGCATATaGATACAGTCGCAGTTGAAGGCCAGATGCATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLNMYGPACVGI*IQSQLKARCIG Trigger: TCCAATGCATCTGGCCTTCAACTGCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CCA 72 bp | CTTCTGAGCAGTCTGAAGACACTGTCCTCACTTCCCTaGAGCACATTTCATCAAGATGTTCTGAAAATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSSLKTLSSLP*STFHQDVLKMS Trigger: TGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCACTTCCACCAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTAAGTTCCATGCCAGCTaGAAATTTGGTCTATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASLPPRGHCYFTLCSQKTKFHAS*KFGLSP Trigger: TGGAGATAGACCAAATTTCAAGCTGGCATGGAACTT...AGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACAGTGAAGTTTACTGTTaGCTTTCTATGTCTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LRGIGPEAGSSGKMISINSEVYC*LSMSLS Trigger: GGACAAAGACATAGAAAGCAAACAGTAAACTTCACT...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCAGCACTCACAGTATAAGAACAACCACAGGCAAACAAGGACTATTCAATTTCTTGGAACTGAACTaGGATCCTCTGAAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSSTHSIRTTTGKQGLFNFLELN*DPLKEQ Trigger: CTGCTCTTTCAGAGGATCCAAGTTCAGTTCCAAGAA...ATTGAATAGTCCTTGTTTGCCTGTGGTTGTTCTTATACTGTGAGTGCTGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CCA 72 bp | CTTCTCATGTGTGTTGGTTCTGTTTTTGAATATGTATaGTCCTGCCTGTGTGGGCATATGAATACAGTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLMCVGSVFEYV*SCLCGHMNTVA Trigger: TGCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAACACACATGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | ATGTGTGTTGGTTCTGTTTTTGAATATGTATGGTCCTaGCTGTGTGGGCATATGAATACAGTCGCAGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: MCVGSVFEYVWS*LCGHMNTVAVE Trigger: TTCAACTGCGACTGTATTCATATGCCCACACAGGCAGGACCATACATATTCAAAAACAGAACCAACACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACCCCAAAAGACTTGGATaGGGAACAGTCTCCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYPKRLG*GTVSTA Trigger: TGCTGTGGAGACTGTTCCCAATCCAAGTCTTTTGGG...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCAGCACTCACAGTATAAGAACAACCACAGGCAAACAAGGACTATTCAATTCCTTCTCATGTGTGTaGGTTCTGTTTTTGAATATG | + |
|
Preference number: 3 (lower is better) Translates to: HSSTHSIRTTTGKQGLFNSFSCV*VLFLNM Trigger: CATATTCAAAAACAGAACCAACACACATGAGAAGGA...ATTGAATAGTCCTTGTTTGCCTGTGGTTGTTCTTATACTGTGAGTGCTGCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGAATGTACAGCCAAGTTTCAAACAAGGCAATAACTATACTAACAGATACAACACTGAACAGCTTTaGGGTGTTTTCTCGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: QQNVQPSFKQGNNYTNRYNTEQL*GVFSNS Trigger: GGAGTTCGAGAAAACACCCAAAAGCTGTTCAGTGTT...GTATCTGTTAGTATAGTTATTGCCTTGTTTGAAACTTGGCTGTACATTCTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | TCAAGTATAATAACAGTCAAATTCTCAGGTTCTCCATaGCTCGGACAAGCAAACATTTTATCGGAATATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSIITVKFSGSP*LGQANILSEYL Trigger: GAGATATTCCGATAAAATGTTTGCTTGTCCGAGGCATGGAGAACCTGAGAATTTGACTGTTATTATACTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CCA 72 bp | AATGAGAAAAATACAGGTTCTACATGGACCTTACCTTaGCTAAGTTATAATGCCAGTGTAGGTTACTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: NEKNTGSTWTLP*LSYNASVGYCI Trigger: AATGCAGTAACCTACACTGGCATTATAACTTAGCCAAGGTAAGGTCCATGTAGAACCTGTATTTTTCTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAATGCATCTCTGTTACTCAAGCACTAAAACAATATTCAAAATCCCAAGGTAGTGAAGTTTACTGTTaGCTTTCTATGTCTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GQCISVTQALKQYSKSQGSEVYC*LSMSLS Trigger: GGACAAAGACATAGAAAGCAAACAGTAAACTTCACT...ACCTTGGGATTTTGAATATTGTTTTAGTGCTTGAGTAACAGAGATGCATTGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR GCA 72 bp | TCTACTTGGATTAAGAAGCCACAAGGAACATCTTTGTaGCAAATTGATTCTGAATACAGAGAAATGATACAT | + |
|
Preference number: 3 (lower is better) Translates to: STWIKKPQGTSL*QIDSEYREMIH Trigger: ATGTATCATTTCTCTGTATTCAGAATCAATTTGGCACAAAGATGTTCCTTGTGGCTTCTTAATCCAAGTAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CCA 72 bp | AACAAGGCAATAACTATACTAACAGATACTGAAAGATaGTCTACTCCAAATGAGGGATATCTAGAGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: NKAITILTDTER*STPNEGYLENE Trigger: TTCATTCTCTAGATATCCCTCATTTGGAGTAGACCATCTTTCAGTATCTGTTAGTATAGTTATTGCCTTGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTAGCCCGGCAAGCGAAAGGACAGACAGGTGGACACACCTCCAGTGAAGAGGGTCGGTGGCGATGGTaGAGACATAAAGAGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLARQAKGQTGGHTSSEEGRWRW*RHKERA Trigger: CGCTCGCTCTTTATGTCTTCACCATCGCCACCGACC...CTCTTCACTGGAGGTGTGTCCACCTGTCTGTCCTTTCGCTTGCCGGGCTAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTAGCCCGGCAAGCGAAAGGACAGACAGGTGGACACACCTCCAGTGAAGAGCAGTCGCATCGAGGGTaGTGTCTCCTCAGGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLARQAKGQTGGHTSSEEQSHRG*CLLRVY Trigger: ATAAACCCTGAGGAGACAGCACCCTCGATGCGACTG...CTCTTCACTGGAGGTGTGTCCACCTGTCTGTCCTTTCGCTTGCCGGGCTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR TCA 90 bp | GGACACACCTCCAGTGAAGAGCACTGGTTCAAACAAACTAAGGATAAATGTGGCCGGGCCCGAAGGCGATaGAGGCGCAACCAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GHTSSEEHWFKQTKDKCGRARRR*RRNQRT Trigger: TGTTCTTTGGTTGCGCCTTCATCGCCTTCGGGCCCG...GCCACATTTATCCTTAGTTTGTTTGAACCAGTGCTCTTCACTGGAGGTGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR GCA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACACAGTCGCATCGAGGGTaGTGTCTCCTCAGGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTQSHRG*CLLRVY Trigger: ATAAACCCTGAGGAGACAGCACCCTCGATGCGACTG...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR TCA 90 bp | GCATCACTTCCACCAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTCGGGCCCGAAGGCGATaGAGGCGCAACCAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ASLPPRGHCYFTLCSQKTRARRR*RRNQRT Trigger: TGTTCTTTGGTTGCGCCTTCATCGCCTTCGGGCCCG...AGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR TCA 90 bp | ATTCATCTTAAGTGTCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTTATAGGTCGGTGGCGATGGTaGAGACATAAAGAGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IHLKCHCQTLSLLPLVLIGRWRW*RHKERA Trigger: CGCTCGCTCTTTATGTCTTCACCATCGCCACCGACC...TATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAAAACACAGGCCTGGAAGGTTTGCTGCTACAGGTCATAAAGGCAGGTCACAGGGAAGACTAACTTaGTGGCTGCACAGAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: WEKHRPGRFAATGHKGRSQGRLT*WLHREL Trigger: CAGTTCTCTGTGCAGCCAGCAAGTTAGTCTTCCCTG...TGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
||
| 3UTR CAA 72 bp | TTGCTGTCCATTGGGAAAAACACAGGCCTGGAAGGTTaGCTGCTACAGGTCATAAAGGCAGGTCATACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSIGKNTGLEG*LLQVIKAGHTG Trigger: ACCCGTATGACCTGCCTTTATGACCTGTAGCAGCAAACCTTCCAGGCCTGTGTTTTTCCCAATGGACAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR TCA 90 bp | GTGATAGATCCTCCCAGTTTCCTGAACCTCCTGTCTGAGGGTAAAGGCCACACAGAGAACTGGTTCTCTTaGGTGGCTGACAGAATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIDPPSFLNLLSEGKGHTENWFS*VADRID Trigger: ATCAATTCTGTCAGCCACTCAAGAGAACCAGTTCTC...TGTGTGGCCTTTACCCTCAGACAGGAGGTTCAGGAAACTGGGAGGATCTATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGTCCTCACTTCCCTGGAGCACATTTCATCAAGATGTTCTGAAAATGTCAGAGAATCACCATGAATaGCCACTGTGCCTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSLPWSTFHQDVLKMSENHHE*PLCLAP Trigger: TGGGGCCAGGCACAGTGGGCATTCATGGTGATTCTC...TGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGACAGTTCCAGGCTGGACAGTTCTGTGGCTTCCAAGTTCCAAGATACAGCAGGTAATTCTGTACTaGTCCATCTCTGTTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRTVPGWTVLWLPSSKIQQVILY*SISVVS Trigger: ACTGACAACAGAGATGGACCAGTACAGAATTACCTG...CTGTATCTTGGAACTTGGAAGCCACAGAACTGTCCAGCCTGGAACTGTCCTGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGGTATTGGCCCTGAAGCTGGATCATCCGGGAAGATGATCAGTATAAACTCTCCTCAGGGTTTATaGTTTTCAAACCCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGIGPEAGSSGKMISINSPQGL*FSNPHW Trigger: CCAGTGAGGGTTTGAAAAGCATAAACCCTGAGGAGA...GTTTATACTGATCATCTTCCCGGATGATCCAGCTTCAGGGCCAATACCTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
||
| 3UTR CAA 72 bp | ATAATCAAGTCTGGAGAAGCCCAGAAGCATCAATCCTaGTTTCCCCAGATGCTTCAAATGTGCAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIKSGEAQKHQS*FPQMLQMCSQA Trigger: AGCCTGGCTGCACATTTGAAGCATCTGGGGAAACAAGGATTGATGCTTCTGGGCTTCTCCAGACTTGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| CDS-3UTR GCA 90 bp | GTAGCATTCCTCTTACAGAGGAAGCCAGAGGCCTTATCTGGAAGACTAACAAAGTCTCCTCAGGGTTTATaGTTTTCAAACCCTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: VAFLLQRKPEALSGRLTKSPQGL*FSNPHW Trigger: CCAGTGAGGGTTTGAAAAGCATAAACCCTGAGGAGA...CTTTGTTAGTCTTCCAGATAAGGCCTCTGGCTTCCTCTGTAAGAGGAATGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| CDS-3UTR CCA 90 bp | GCATCACTTCCACCAAGAGGTCATTGCTACTTTACACTCTGTTCCCAAAAGACTCAGGTAATTCTGTACTaGTCCATCTCTGTTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ASLPPRGHCYFTLCSQKTQVILY*SISVVS Trigger: ACTGACAACAGAGATGGACCAGTACAGAATTACCTG...AGTCTTTTGGGAACAGAGTGTAAAGTAGCAATGACCTCTTGGTGGAAGTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| CDS-3UTR CCA 90 bp | CTGTTACCAGATTCACTTCATAATAAGGACTTAGAAAAGTCTGGGTGGACACCAGGAAGACTAACTTGCTaGCTGCACAGAGAACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLPDSLHNKDLEKSGWTPGRLTC*LHRELV Trigger: AACCAGTTCTCTGTGCAGCCAGCAAGTTAGTCTTCC...TGGTGTCCACCCAGACTTTTCTAAGTCCTTATTATGAAGTGAATCTGGTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
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| CDS-3UTR GCA 90 bp | TTTAGACTCTCCCAAGGAAGTCAGCATATAATTAATCCTAAAGAGCCTGAATTTTCCGGCAACATAAAATaGCCAGATGCCCATGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FRLSQGSQHIINPKEPEFSGNIK*PDAHEH Trigger: GTGCTCATGGGCATCTGGGCATTTTATGTTGCCGGA...AAATTCAGGCTCTTTAGGATTAATTATATGCTGACTTCCTTGGGAGAGTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034934.15 |
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| 3UTR CAA 72 bp | ACAGTAGCAAATGAGAAGTGTCAATGTCACACTACTTaGTGGTTTAGCTACACTCTCACAAAGAGAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: TVANEKCQCHTT*WFSYTLTKRRS Trigger: AGATCTTCTCTTTGTGAGAGTGTAGCTAAACCACAAAGTAGTGTGACATTGACACTTCTCATTTGCTACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CAA 72 bp | TACCAGTTACTTGTATCAGTGACTTGTATAAGTGACTaGTATAAGTCACTGAGCCTTAAAGTCTTGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: YQLLVSVTCISD*YKSLSLKVLGL Trigger: GAGTCCCAAGACTTTAAGGCTCAGTGACTTATACAAGTCACTTATACAAGTCACTGATACAAGTAACTGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| 3UTR CAA 72 bp | TTCTCTACTTGGATTAAGAAGCCACAAGGAACATCTTaGTGCCAAATTGATTCTGAATACAGAGAAATGATA | + |
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Preference number: 4 (lower is better) Translates to: FSTWIKKPQGTS*CQIDSEYREMI Trigger: TATCATTTCTCTGTATTCAGAATCAATTTGGCACAAAGATGTTCCTTGTGGCTTCTTAATCCAAGTAGAGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| CDS GCA 90 bp | TCCAAAGCCCAAGCCAGAAACATAGGCCAACAGTCGCATCGAGGGTaGTGTCTCCTCAGGGTTTATGCTTTTCAAACCCTCACTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SKAQARNIGQQSHRG*CLLRVYAFQTLTGF Trigger: AAAGCCAGTGAGGGTTTGAAAAGCATAAACCCTGAGGAGACAGCACCCTCGATGCGACTGTTGGCCTATGTTTCTGGCTTGGGCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| CDS GCA 90 bp | GACGACCAGTGTCATGAAAGCATAGGCCAACAGTCGCATCGAGGGTaGTGTCTCCTCAGGGTTTATGCTTTTCAAACCCTCACTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: DDQCHESIGQQSHRG*CLLRVYAFQTLTGF Trigger: AAAGCCAGTGAGGGTTTGAAAAGCATAAACCCTGAGGAGACAGCACCCTCGATGCGACTGTTGGCCTATGCTTTCATGACACTGGTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113730.3 |
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| CDS CCA 90 bp | GGGAAGACTAACTTGCTGGCTGCACAGAGAACTGGTTCTCTTGAGTaGCTGACAGAATTGATGTCCATAGGAGAGGCTGAGATTCGAACT | + |
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Preference number: 5 (lower is better) Translates to: GKTNLLAAQRTGSLE*LTELMSIGEAEIRT Trigger: AGTTCGAATCTCAGCCTCTCCTATGGACATCAATTCTGTCAGCCACTCAAGAGAACCAGTTCTCTGTGCAGCCAGCAAGTTAGTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
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| CDS-3UTR CAA 90 bp | ATTCATCTTAAGTGTCACTGCCAAACCCTCTCACTGCTGCCCCTGGTTCTTATAGAGTGGCTGACAGAATaGATGTCCATAGGAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: IHLKCHCQTLSLLPLVLIEWLTE*MSIGEA Trigger: AGCCTCTCCTATGGACATCAATTCTGTCAGCCACTC...TATAAGAACCAGGGGCAGCAGTGAGAGGGTTTGGCAGTGACACTTAAGATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
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| CDS-3UTR CAA 90 bp | AATGCAGTAGCATTCCTCTTACAGAGGAAGCCAGAGGCCTTATCTGGAAGACTAACAGGGAAGACTAACTaGCTGGCTGCACAGAGAACT | + |
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Preference number: 5 (lower is better) Translates to: NAVAFLLQRKPEALSGRLTGKTN*LAAQRT Trigger: AGTTCTCTGTGCAGCCAGCAAGTTAGTCTTCCCTGT...TAGTCTTCCAGATAAGGCCTCTGGCTTCCTCTGTAAGAGGAATGCTACTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
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| CDS GCA 72 bp | CAAGCCAGAAACATAGGCCAACAGTCGCATCGAGGGTaGTGTCTCCTCAGGGTTTATGCTTTTCAAACCCTC | + |
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Preference number: 6 (lower is better) Translates to: QARNIGQQSHRG*CLLRVYAFQTL Trigger: GAGGGTTTGAAAAGCATAAACCCTGAGGAGACAGCACCCTCGATGCGACTGTTGGCCTATGTTTCTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034934.15 ENSMUST00000168309.8 |
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| CDS GCA 72 bp | TGTCATGAAAGCATAGGCCAACAGTCGCATCGAGGGTaGTGTCTCCTCAGGGTTTATGCTTTTCAAACCCTC | + |
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Preference number: 6 (lower is better) Translates to: CHESIGQQSHRG*CLLRVYAFQTL Trigger: GAGGGTTTGAAAAGCATAAACCCTGAGGAGACAGCACCCTCGATGCGACTGTTGGCCTATGCTTTCATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113730.3 |
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| CDS GCA 72 bp | GAAAGTCAAAGACCTTTCCAACAGGGAAGACTAACTTaGTGGCTGCACAGAGAACTGGTTCTCTTGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ESQRPFQQGRLT*WLHRELVLLSG Trigger: GCCACTCAAGAGAACCAGTTCTCTGTGCAGCCAGCAAGTTAGTCTTCCCTGTTGGAAAGGTCTTTGACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
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| CDS CAA 72 bp | GCACAGAGAACTGGTTCTCTTGAGTGGCTGACAGAATaGATGTCCATAGGAGAGGCTGAGATTCGAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: AQRTGSLEWLTE*MSIGEAEIRTE Trigger: TTCAGTTCGAATCTCAGCCTCTCCTATGGACATCAATTCTGTCAGCCACTCAAGAGAACCAGTTCTCTGTGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168309.8 |
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