Pregenerated sensors for APEX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025269Ensembl transcript IDs: ENSMUST00000026303.16, ENSMUST00000112719.2, ENSMUST00000112720.8, ENSMUST00000112721.10, ENSMUST00000112725.8, ENSMUST00000112727.10, ENSMUST00000140207.8
Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCCATTTCAGAGAAGCTGCTGCTGGCCTGGACTGAGGTGGGGCTaGCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: LPFQRSCCWPGLRWG*PSKMCLWLHATSVI Trigger: GATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTCAGTCCAGGCCAGCAGCAGCTTCTCTGAAATGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR CCA 90 bp | TGCTGGCCTGGACTGAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTaGCTGCATGCAACTTCTGTCATCGTCCTGTGCACTTTGAACTTA | + |
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Preference number: 1 (lower is better) Translates to: CWPGLRWGCPSKMCL*LHATSVIVLCTLNL Trigger: TAAGTTCAAAGTGCACAGGACGATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTCAGTCCAGGCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR GCA 90 bp | GCGATCCTACTTTGGGAACATGGGACCCCAATATGTTACCACCTATaGTTAAGGAGCCAGCTGCCTTGGATGCCAGCTCCACCTGCACTC | + |
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Preference number: 1 (lower is better) Translates to: AILLWEHGTPICYHL*LRSQLPWMPAPPAL Trigger: GAGTGCAGGTGGAGCTGGCATCCAAGGCAGCTGGCTCCTTAAGCATAGGTGGTAACATATTGGGGTCCCATGTTCCCAAAGTAGGATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR CCA 90 bp | TTTCTTCTTCCATTTCAGAGAAGCTGCTGCTGGCCTGGACTGAGGTaGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: FLLPFQRSCCWPGLR*GCPSKMCLWLHATS Trigger: AGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTCAGTCCAGGCCAGCAGCAGCTTCTCTGAAATGGAAGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR TCA 90 bp | ACACTACACCCACCTTCTTCACTGATCCAACCTCAGAGTAGCAAATaGTCCCCAGAGCTCACCTTTCCTGGGGAGCACAACTCCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: TLHPPSSLIQPQSSK*SPELTFPGEHNSSL Trigger: GAGGGAGGAGTTGTGCTCCCCAGGAAAGGTGAGCTCTGGGGATCATTTGCTACTCTGAGGTTGGATCAGTGAAGAAGGTGGGTGTAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR TCA 90 bp | GATTTAGTGCCCAATCTTCTACAGAGGTGCAGCCTCTCTCAGCCTTaGAGCAGGCTGATCCAGACTTTGACCTTGCTGCCTTCTGACCTT | + |
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Preference number: 1 (lower is better) Translates to: DLVPNLLQRCSLSQP*SRLIQTLTLLPSDL Trigger: AAGGTCAGAAGGCAGCAAGGTCAAAGTCTGGATCAGCCTGCTTCAAGGCTGAGAGAGGCTGCACCTCTGTAGAAGATTGGGCACTAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR TCA 90 bp | TGGCTGCATGCAACTTCTGTCATCGTCCTGTGCACTTTGAACTTATaGGCGAGTGGGAGCGATCCTACTTTGGGAACATGGGACCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: WLHATSVIVLCTLNL*ASGSDPTLGTWDPN Trigger: ATTGGGGTCCCATGTTCCCAAAGTAGGATCGCTCCCACTCGCTCATAAGTTCAAAGTGCACAGGACGATGACAGAAGTTGCATGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR TCA 90 bp | TGTGTCTGTGGCTGCATGCAACTTCTGTCATCGTCCTGTGCACTTTaGACTTATGAGCGAGTGGGAGCGATCCTACTTTGGGAACATGGG | + |
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Preference number: 1 (lower is better) Translates to: CVCGCMQLLSSSCAL*TYERVGAILLWEHG Trigger: CCCATGTTCCCAAAGTAGGATCGCTCCCACTCGCTCATAAGTTCAAAGTGCACAGGACGATGACAGAAGTTGCATGCAGCCACAGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR CCA 90 bp | TGCAACTTCTGTCATCGTCCTGTGCACTTTGAACTTATGAGCGAGTaGGAGCGATCCTACTTTGGGAACATGGGACCCCAATATGTTACC | + |
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Preference number: 1 (lower is better) Translates to: CNFCHRPVHFELMSE*ERSYFGNMGPQYVT Trigger: GGTAACATATTGGGGTCCCATGTTCCCAAAGTAGGATCGCTCCCACTCGCTCATAAGTTCAAAGTGCACAGGACGATGACAGAAGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR TCA 90 bp | TGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTaGAGGCCGAAACACCAATTCTTTCTCTCTGGTGATTCATGTGTA | + |
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Preference number: 1 (lower is better) Translates to: WPSSLRLMVTQTLDL*RPKHQFFLSGDSCV Trigger: TACACATGAATCACCAGAGAGAAAGAATTGGTGTTTCGGCCTTCAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR GCA 90 bp | AGAATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTaGTCCTGCCAATTTTCCCAGCCCTTAGCTTTCCTGGTTCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: RINLSILCTALQCLS*SCQFSQPLAFLVLK Trigger: CTTTAGAACCAGGAAAGCTAAGGGCTGGGAAAATTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
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| 3UTR GCA 90 bp | TATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTaGCACAGGCGTTTTGTTTCTCTAAGTGTATCCAATCAATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: YDILCFAPGAVCVLA*HRRFVSLSVSNQFK Trigger: CTTGAATTGATTGGATACACTTAGAGAAACAAAACGCCTGTGGCAGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR TCA 90 bp | TGCTTCCTGCATCTTCCAGCACCTGTAGGCAATTTAAAATCAAGATaGAGAGCTATCTATAGATTCATGGGACAAGGTGGGCAACCTGAA | + |
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Preference number: 1 (lower is better) Translates to: CFLHLPAPVGNLKSR*RAIYRFMGQGGQPE Trigger: TTCAGGTTGCCCACCTTGTCCCATGAATCTATAGATAGCTCTTCATCTTGATTTTAAATTGCCTACAGGTGCTGGAAGATGCAGGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR CCA 90 bp | TTGTCTTTATCAGGTCAGGATTTTCTAAGCAGAGAGATTCACTGTTaGGCCTATACATGTTCTTTATGTAGGGAGAGATACAGGCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: LSLSGQDFLSREIHC*AYTCSLCRERYRLA Trigger: TGCTAGCCTGTATCTCTCCCTACATAAAGAACATGTATAGGCCCAACAGTGAATCTCTCTGCTTAGAAAATCCTGACCTGATAAAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR TCA 90 bp | AATATGAAGGTCTCAGTAGGCTTGCAGTGTGGTGATGAAAGATCCTaGCAGAATGTAAAAGGTCACAGAAGCCCTGAAATTGATAAGATA | + |
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Preference number: 1 (lower is better) Translates to: NMKVSVGLQCGDERS*QNVKGHRSPEIDKI Trigger: TATCTTATCAATTTCAGGGCTTCTGTGACCTTTTACATTCTGTCAGGATCTTTCATCACCACACTGCAAGCCTACTGAGACCTTCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR GCA 90 bp | AGAGCTATCTATAGATTCATGGGACAAGGTGGGCAACCTGAACTTTaGCAAGACAGTCACACTGGTTTGATGAAGTATTCAAAAGAATTA | + |
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Preference number: 1 (lower is better) Translates to: RAIYRFMGQGGQPEL*QDSHTGLMKYSKEL Trigger: TAATTCTTTTGAATACTTCATCAAACCAGTGTGACTGTCTTGGCAAAGTTCAGGTTGCCCACCTTGTCCCATGAATCTATAGATAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR CCA 90 bp | CTGATGCCAGATGTTCAGTTATTTGTTAGGACAGACACCACTCTTTaGTACTGTACTAGAGATTGGGCAATTTGTAAACAACAGATCAAA | + |
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Preference number: 1 (lower is better) Translates to: LMPDVQLFVRTDTTL*YCTRDWAICKQQIK Trigger: TTTGATCTGTTGTTTACAAATTGCCCAATCTCTAGTACAGTACCAAAGAGTGGTGTCTGTCCTAACAAATAACTGAACATCTGGCATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTTGGCCTGGACTGAGGTaGGGCTGCCCCTCCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPWPGLR*GCPSKM Trigger: CATCTTGGAGGGGCAGCCCCACCTCAGTCCAGGCCA...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTTTCTGTTCCCTCCTCTaGGTCCCTGCTCACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPFCSLL*VPAHPR Trigger: CCTGGGGTGAGCAGGGACCCAGAGGAGGGAACAGAA...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTATCTTTGGGAAACAAAAGATGGGTGTGGATGGAGTCCCATAGGTAAGTGGCACCTGCACTCCCCCTaGGGCTGGGCTTCCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LYLWETKDGCGWSPIGKWHLHSP*GWASSC Trigger: GCAGGAGGAAGCCCAGCCCCAGGGGGAGTGCAGGTG...CCACTTACCTATGGGACTCCATCCACACCCATCTTTTGTTTCCCAAAGATAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGCCTCCTCTGGGTCCCTaGTCACCCCAGGAATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMPPLGP*SPQECA Trigger: AGCACATTCCTGGGGTGAGCAGGGACCCAGAGGAGG...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCAAGCCAGACACCAAGAACTaGCTGGCGGGGGTGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PWTCFFRPQSPLQREFIKPDTKN*LAGVWG Trigger: CCCCCACACCCCCGCCAGCCAGTTCTTGGTGTCTGG...CTTGATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR CAA 90 bp | CTCTGGCTTTCCCTGAATAAAGCCTCATGTGGTTTGCCATCAAGCTaGGTCTCTCGTGAGTTGTTGGGTGTCCGCTATTGTTCCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LWLSLNKASCGLPSS*VSRELLGVRYCSEA Trigger: GGCCTCGGAACAATAGCGGACACCCAACAACTCACGAGAGACCAAGCTTGATGGCAAACCACATGAGGCTTTATTCAGGGAAAGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGACCCCGTGCACGGGGTaGACACGAAGACATCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMTPCTG*TRRHPY Trigger: ATAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGT...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCGATGCCAGCTCCACCTaGACTCCCCCTGGGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: IQSIQVLSLCFALLTSSFDASST*TPPGAG Trigger: CCCAGCCCCAGGGGGAGTGCAGGTGGAGCTGGCATC...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATATATGTTACCACCTATaGTTAAGGAGCCAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: EVGLPLQDVSVAACNFCHICYHL*LRSQLP Trigger: AGGCAGCTGGCTCCTTAAGCATAGGTGGTAACATAT...ATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTAGGCAGGTACTGGCTTaGAGGAGGACCATATACATG | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPRQVLA*RRTIYM Trigger: CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTAGATGTGTCTGTGGCTaGATGCAACTTCTGTCATCG | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPRCVCG*MQLLSS Trigger: CGATGACAGAAGTTGCATGCAGCCACAGACACATCT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAATCCTCTACCCCTGCCTaGGATATGAGTCATCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: INLSILCTALQCLSCSCQSSTPA*DMSHPQ Trigger: CTGGGGATGACTCATATCCCAGGCAGGGGTAGAGGA...TTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTACTATAGGCAGGTACTaGCTTGGAGGAGGACCATAT | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPTIGRY*LGGGPY Trigger: ATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAAGACTCTGCTTCCTGCTaGAAGGTCTTGAGACGTTCC | + |
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Preference number: 2 (lower is better) Translates to: INLSILCTALQCLSCSCQDSASC*KVLRRS Trigger: GGAACGTCTCAAGACCTTTCAGCAGGAAGCAGAGTC...TTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGCAAACCCTGGACCTCTaGAGGCCGAAACACCAATTC | + |
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Preference number: 2 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMQTLDL*RPKHQF Trigger: GAATTGGTGTTTCGGCCTTCAGAGGTCCAGGGTTTG...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTTGATTATTCTTCTAGTTTGTTGGCTGGCGGGGGTGTaGGGGGTAGGCCTACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: FSPVLVHFAVSLIILLVCWLAGV*GVGLPS Trigger: AGAGGGTAGGCCTACCCCCCACACCCCCGCCAGCCA...ACAAACTAGAAGAATAATCAAGCTAACTGCAAAGTGAACAAGAACTGGGCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTTTGGGAAACAAAAGATaGGTGTGGATGGAGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPLGNKR*VWMESH Trigger: ATGGGACTCCATCCACACCCATCTTTTGTTTCCCAA...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTGATTTCCTATCCTTCTaGAAGGTGAAGGAAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPDFLSF*KVKEEA Trigger: AGCTTCTTCCTTCACCTTGCAGAAGGATAGGAAATC...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCATCCCCAGAGCTCTaGCTTTCCCTGAATAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GSHGHAFSGPKALYKESLSSPEL*LSLNKA Trigger: GGCTTTATTCAGGGAAAGCCAGAGCTCTGGGGATGA...TAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR CAA 90 bp | ATGTGTGTGCCCATTGATGAAGCCCACTGCCAGGTGTTTGTGATATaGGTTGCTAAGATAGAGTCAGAAAATCTCCCCAGCAACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: MCVPIDEAHCQVFVI*VAKIESENLPSNHS Trigger: GCTGTGGTTGCTGGGGAGATTTTCTGACTCTATCTTAGCAACCAATATCACAAACACCTGGCAGTGGGCTTCATCAATGGGCACACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTATTCTTTCTCTCTGGTaGTTCATGTGTAACAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPILSLW*FMCNSC Trigger: ACAGCTGTTACACATGAATCACCAGAGAGAAAGAAT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTATCCTGTCACAGGCATaGTTTCCTGTCTTTTATACA | + |
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Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPILSQA*FPVFYT Trigger: TGTATAAAAGACAGGAAATCATGCCTGTGACAGGAT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCGGCTGGGCTTCCTCCTaGTCTCTGCTTTCCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: IQSIQVLSLCFALLTSSFGWASS*SLLSCV Trigger: CACACAGGAAAGCAGAGAGCAGGAGGAAGCCCAGCC...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTACTTTGCCCTCGTGGTTaGCTCCTCTACCCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLLCPRG*LLYPCL Trigger: CAGGCAGGGGTAGAGGAGTCAACCACGAGGGCAAAG...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCAAGGTGAAGGAAGAAGCTTGGCTACAGTATACAAGGTCTTCACAGCAACCCTGCTCCTCCATGTaGAAAGAGGAAGAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: FCKVKEEAWLQYTRSSQQPCSSM*KEEETE Trigger: CTCTGTTTCTTCCTCTTTGCACATGGAGGAGCAGGG...TTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATAAGCCTCATGTGGTTTaGCATCAAGCTTGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: AAMDMLFQAPKPFTKRVYKPHVV*HQAWSL Trigger: GAGAGACCAAGCTTGATGGCAAACCACATGAGGCTT...ATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTGATGAAGTATTCAAAAGAATTATAAAGCCTCCAGCAGAAAGGTATGCTCCCCTGCCTGGGATATaGGTCATCCCCAGAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WFDEVFKRIIKPPAERYAPLPGI*VIPRAL Trigger: CAGAGCTCTGGGGATGACTCATATCCCAGGCAGGGG...AGCATACCTTTCTGCTGGAGGCTTTATAATTCTTTTGAATACTTCATCAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTGCATCTTCCAGCACCTGTAGGCAATTTAAAATCAAGATGAAGAGCTATCGATCTCCTACGGACTaGCTCCAGACACCAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: LPASSSTCRQFKIKMKSYRSPTD*LQTPRT Trigger: AGTTCTTGGTGTCTGGAGCCAGTCCGTAGGAGATCG...ATAGCTCTTCATCTTGATTTTAAATTGCCTACAGGTGCTGGAAGATGCAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTATCTTTGGGAAACAAAAGATGGGTGTGGATGGAGTCCCATAGGTAAGTGGTCCAAGATGTGTCTGTaGCTGCATGCAACTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LYLWETKDGCGWSPIGKWSKMCL*LHATSV Trigger: GACAGAAGTTGCATGCAGCCACAGACACATCTTGGA...CCACTTACCTATGGGACTCCATCCACACCCATCTTTTGTTTCCCAAAGATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTTTAGACATACAAATCTaGAAACTGAGACAGAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPSMTFCALHLVLSVSWPLDIQI*KLRQSS Trigger: AGAACTCTGTCTCAGTTTCCAGATTTGTATGTCTAA...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CAA 90 bp | CATCTTATAGGATTTCCTATCCTTCTGCAAGGTGAAGGAAGAAGCTaGGCTACAGTATACAAGGTCTTCACAGCAAGGCTCCCAACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLIGFPILLQGEGRS*ATVYKVFTARLPTK Trigger: CTTTGTTGGGAGCCTTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAAGGATAGGAAATCCTATAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCACACACCTTTAATTTTAGCACTGAGTAGGCAGAGGCACATAGCTCTCTGTATCTTTGTTTCCAGCTaGAACTCCATCTTCTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WHTPLILALSRQRHIALCIFVSS*NSIFSL Trigger: GAGAGAGAAGATGGAGTTCCAGCTGGAAACAAAGAT...ACAGAGAGCTATGTGCCTCTGCCTACTCAGTGCTAAAATTAAAGGTGTGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCGCAGAAAGGGCTTGGTaGAGGACAGGTATGATCGAT | + |
|
Preference number: 2 (lower is better) Translates to: IQSIQVLSLCFALLTSSFAERAW*RTGMID Trigger: ATCGATCATACCTGTCCTCCACCAAGCCCTTTCTGC...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGAAGCTTGGTCTCTCGTaGGTTGTTGGGTGTCCGCTA | + |
|
Preference number: 2 (lower is better) Translates to: YKTLDHRHNSAQFLFTLQKLGLS*VVGCPL Trigger: TAGCGGACACCCAACAACTCACGAGAGACCAAGCTT...CTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTTGATTATTCTTCTAGTTTGTAGGGCCTATAAAAACTaGGACCCCTTTGCCCTCGTG | + |
|
Preference number: 2 (lower is better) Translates to: FSPVLVHFAVSLIILLVCRAYKN*DPFALV Trigger: CACGAGGGCAAAGGGGTCTCAGTTTTTATAGGCCCT...ACAAACTAGAAGAATAATCAAGCTAACTGCAAAGTGAACAAGAACTGGGCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR CAA 90 bp | GCGTTTTGTTTCTCTAAGTGTATCCAATCAATTCAAGTTCTCTCCTaGTGCTTCGCTCTCTTGACTTCATCATTCATTATCCCCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: AFCFSKCIQSIQVLS*CFALLTSSFIIPSG Trigger: GCCTGAGGGGATAATGAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGATACACTTAGAGAAACAAAACGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAAACTAAAATCTTTGTTTCCAGCTGGAACTCCATCTTCTCTCTCCATATTCCTGCTGAAAGGTCTTaGGACGTTCCAGAGACACAC | + |
|
Preference number: 2 (lower is better) Translates to: CKTKIFVSSWNSIFSLHIPAERS*DVPETH Trigger: GTGTGTCTCTGGAACGTCTCAAGACCTTTCAGCAGG...AATATGGAGAGAGAAGATGGAGTTCCAGCTGGAAACAAAGATTTTAGTTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTGCATCTTCCAGCACCTGTAGGCAATTTAAAATCAAGATGAAGAGCTATAACCTCTCTATCCTGTaGACAGCACTACAGTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LPASSSTCRQFKIKMKSYNLSIL*TALQCL Trigger: AAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTT...ATAGCTCTTCATCTTGATTTTAAATTGCCTACAGGTGCTGGAAGATGCAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTGCATCTTCCAGCACCTGTAGGCAATTTAAAATCAAGATGAAGAGCTATGAGTTTGAAGCCACTTaGGTCTATACAGTGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LPASSSTCRQFKIKMKSYEFEAT*VYTVSS Trigger: GGAACTCACTGTATAGACCCAAGTGGCTTCAAACTC...ATAGCTCTTCATCTTGATTTTAAATTGCCTACAGGTGCTGGAAGATGCAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTACTTGGAGTCTTTCAGTaGCAGCTGGTGATGACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLLGVFQ*QLVMTS Trigger: AGAAGTCATCACCAGCTGTCACTGAAAGACTCCAAG...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTTGATTATTCTTCTAGTTTGTGGTGATGAAAGATCCTaGCAGAATGTAAAAGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FSPVLVHFAVSLIILLVCGDERS*QNVKGH Trigger: GTGACCTTTTACATTCTGTCAGGATCTTTCATCACC...ACAAACTAGAAGAATAATCAAGCTAACTGCAAAGTGAACAAGAACTGGGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR CCA 72 bp | CGTTCCAGAGACACACCCTGTCGATCTCCTACGGACTaGCTCCAGACACCAAGAACTGGCTGGCGGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RSRDTPCRSPTD*LQTPRTGWRGC Trigger: ACACCCCCGCCAGCCAGTTCTTGGTGTCTGGAGCCAGTCCGTAGGAGATCGACAGGGTGTGTCTCTGGAACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR CCA 72 bp | CCATTTCAGAGAAGCTGCTGCTGGCCTGGACTGAGGTaGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PFQRSCCWPGLR*GCPSKMCLWLH Trigger: ATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTCAGTCCAGGCCAGCAGCAGCTTCTCTGAAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR GCA 72 bp | TTCCCACAGCAGCTTCTGTTCCCTCCTCTGGGTCCCTaGTCACCCCAGGAATGTGCTCACAACACTGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPQQLLFPPLGP*SPQECAHNTDR Trigger: CCTATCAGTGTTGTGAGCACATTCCTGGGGTGAGCAGGGACCCAGAGGAGGGAACAGAAGCTGCTGTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR TCA 72 bp | CCCAATCTTCTACAGAGGTGCAGCCTCTCTCAGCCTTaGAGCAGGCTGATCCAGACTTTGACCTTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PNLLQRCSLSQP*SRLIQTLTLLP Trigger: AGGCAGCAAGGTCAAAGTCTGGATCAGCCTGCTTCAAGGCTGAGAGAGGCTGCACCTCTGTAGAAGATTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR TCA 72 bp | AGCCTCATGTGGTTTGCCATCAAGCTTGGTCTCTCGTaGGTTGTTGGGTGTCCGCTATTGTTCCGAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLMWFAIKLGLS*VVGCPLLFRGL Trigger: CAGGCCTCGGAACAATAGCGGACACCCAACAACTCACGAGAGACCAAGCTTGATGGCAAACCACATGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR CCA 72 bp | CACAGCAAGGCTCCCAACAAAGCCTCCCAACTCTACTaGCCAAGGTGGCCATCTTCCCTGAGACTTATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HSKAPNKASQLY*PRWPSSLRLMV Trigger: TACCATAAGTCTCAGGGAAGATGGCCACCTTGGCCAGTAGAGTTGGGAGGCTTTGTTGGGAGCCTTGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR TCA 72 bp | CCACCTTCTTCACTGATCCAACCTCAGAGTAGCAAATaGTCCCCAGAGCTCACCTTTCCTGGGGAGCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PPSSLIQPQSSK*SPELTFPGEHN Trigger: GTTGTGCTCCCCAGGAAAGGTGAGCTCTGGGGATCATTTGCTACTCTGAGGTTGGATCAGTGAAGAAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR GCA 72 bp | CTTTGGGAACATGGGACCCCAATATGTTACCACCTATaGTTAAGGAGCCAGCTGCCTTGGATGCCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LWEHGTPICYHL*LRSQLPWMPAP Trigger: TGGAGCTGGCATCCAAGGCAGCTGGCTCCTTAAGCATAGGTGGTAACATATTGGGGTCCCATGTTCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CCA 72 bp | GCTCCCAACAAAGCCTCCCAACTCTACTGGCCAAGGTaGCCATCTTCCCTGAGACTTATGGTAACTCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: APNKASQLYWPR*PSSLRLMVTQT Trigger: GGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGCCAGTAGAGTTGGGAGGCTTTGTTGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR TCA 72 bp | GCTCTATTCGCTCTTCTCCAAGACTCTGCTTCCTGCTaGAAGGTCTTGAGACGTTCCAGAGACACACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ALFALLQDSASC*KVLRRSRDTPC Trigger: ACAGGGTGTGTCTCTGGAACGTCTCAAGACCTTTCAGCAGGAAGCAGAGTCTTGGAGAAGAGCGAATAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR TCA 72 bp | CACCATGTCGCCTTGATAGTATCTCACTGGGTTACATaGGGCCAAGCAAGCCTCGAAATGAGAGAGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HHVALIVSHWVT*GQASLEMREPH Trigger: GTGAGGCTCTCTCATTTCGAGGCTTGCTTGGCCTCATGTAACCCAGTGAGATACTATCAAGGCGACATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTAAGGCTGATCCAGACTTaGACCTTGCTGCCTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSHGHAFSGPKALYKESLRLIQT*TLLPSD Trigger: GTCAGAAGGCAGCAAGGTCAAAGTCTGGATCAGCCT...TAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTATTCAAGTTCTCTCCTaGTGCTTCGCTCTCTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LPSMTFCALHLVLSVSWPIQVLS*CFALLT Trigger: AGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAAT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR GCA 72 bp | GACCTTGATGGCTCTATTCGCTCTTCTCCAAGACTCTaGTTCCTGCTGAAAGGTCTTGAGACGTTCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLDGSIRSSPRL*FLLKGLETFQR Trigger: TCTCTGGAACGTCTCAAGACCTTTCAGCAGGAAGCAGAGTCTTGGAGAAGAGCGAATAGAGCCATCAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR GCA 72 bp | ATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTaGCAATTTTCCCAGCCCTTAGCTTTCCTGGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ILCTALQCLSCS*QFSQPLAFLVL Trigger: TAGAACCAGGAAAGCTAAGGGCTGGGAAAATTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| 3UTR TCA 72 bp | CTCACTGGGTTACATGAGGCCAAGCAAGCCTCGAAATaGGAGAGCCTCACACTCAACTTTTTAGAGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: LTGLHEAKQASK*ESLTLNFLECI Trigger: GATGCACTCTAAAAAGTTGAGTGTGAGGCTCTCTCATTTCGAGGCTTGCTTGGCCTCATGTAACCCAGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CCA 72 bp | CAGAAAGGGGGAACAAGAAGTACTATAGGCAGGTACTaGCTTGGAGGAGGACCATATACATGGAATGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QKGGTRSTIGRY*LGGGPYTWNGK Trigger: CTTGCCATTCCATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCCCCTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTATGATCGATTCAGTTTaGTCCAAAGTGTTAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPSMTFCALHLVLSVSWPMIDSV*SKVLDS Trigger: GCTGTCTAACACTTTGGACAAAACTGAATCGATCAT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR GCA 72 bp | CTTGAACCCATGTGTGTGCCCATTGATGAAGCCCACTaGCAGGTGTTTGTGATATTGGTTGCTAAGATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LEPMCVPIDEAH*QVFVILVAKIE Trigger: CTCTATCTTAGCAACCAATATCACAAACACCTGGCAGTGGGCTTCATCAATGGGCACACACATGGGTTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR TCA 72 bp | GACCCACAGACAAATGGTAGCATTCGTGGGTTATACTaGAGCAGACAAGTAAATCTACTTCTGGACCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: DPQTNGSIRGLY*SRQVNLLLDPS Trigger: ACTTGGGTCCAGAAGTAGATTTACTTGTCTGCTTCAGTATAACCCACGAATGCTACCATTTGTCTGTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR TCA 72 bp | TCTATCATGTTCTTATTGTGGGCTGGGCACTGTGCTTaGGAGCGAGGAATAGACAAAACACAGAACCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SIMFLLWAGHCA*ERGIDKTQNPF Trigger: AAAAGGGTTCTGTGTTTTGTCTATTCCTCGCTCTCAAGCACAGTGCCCAGCCCACAATAAGAACATGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGTCTCTCGTGAGTTGTaGGGTGTCCGCTATTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLVSREL*GVRYCS Trigger: GGAACAATAGCGGACACCCAACAACTCACGAGAGAC...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR GCA 72 bp | TATAGATTCATGGGACAAGGTGGGCAACCTGAACTTTaGCAAGACAGTCACACTGGTTTGATGAAGTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: YRFMGQGGQPEL*QDSHTGLMKYS Trigger: TGAATACTTCATCAAACCAGTGTGACTGTCTTGGCAAAGTTCAGGTTGCCCACCTTGTCCCATGAATCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR TCA 72 bp | CATCTTCCAGCACCTGTAGGCAATTTAAAATCAAGATaGAGAGCTATCTATAGATTCATGGGACAAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLPAPVGNLKSR*RAIYRFMGQGG Trigger: CCCACCTTGTCCCATGAATCTATAGATAGCTCTTCATCTTGATTTTAAATTGCCTACAGGTGCTGGAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR TCA 72 bp | AATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTaGCTTCATCATTCATTATCCCCTCAGGCTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: NQFKFSPCASLS*LHHSLSPQAYF Trigger: GAAGTAAGCCTGAGGGGATAATGAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CCA 72 bp | TCAGGTCAGGATTTTCTAAGCAGAGAGATTCACTGTTaGGCCTATACATGTTCTTTATGTAGGGAGAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: SGQDFLSREIHC*AYTCSLCRERY Trigger: GTATCTCTCCCTACATAAAGAACATGTATAGGCCCAACAGTGAATCTCTCTGCTTAGAAAATCCTGACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGATGAAGTATTCAAAAGAATTATAAAGCCTCCAGCAGAAAGGTATGCTTGCTGCCTTCTGACCTaGATGGCTCTATTCGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WFDEVFKRIIKPPAERYACCLLT*MALFAL Trigger: AAGAGCGAATAGAGCCATCAAGGTCAGAAGGCAGCA...AGCATACCTTTCTGCTGGAGGCTTTATAATTCTTTTGAATACTTCATCAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCAAGTCCAGGTGTTTGTGATATaGGTTGCTAAGATAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: MDMLFQAPKPFTKRVYQVQVFVI*VAKIES Trigger: TGACTCTATCTTAGCAACCAATATCACAAACACCTG...GACTTGATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR GCA 72 bp | TCTAAGTGTATCCAATCAATTCAAGTTCTCTCCTTGTaGTTCGCTCTCTTGACTTCATCATTCATTATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SKCIQSIQVLSL*FALLTSSFIIP Trigger: GGGGATAATGAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGATACACTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR TCA 72 bp | GAGAAATTTGAAGTGATTTCTTTAGTTCTCATCTTTTaGGCCCTTACCAGAATTAACCTCTCTATCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EKFEVISLVLIF*ALTRINLSILC Trigger: GCACAGGATAGAGAGGTTAATTCTGGTAAGGGCTCAAAAGATGAGAACTAAAGAAATCACTTCAAATTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGTAAAACTAAAATCTTaGTTTCCAGCTGGAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLVKLKS*FPAGTP Trigger: TGGAGTTCCAGCTGGAAACAAAGATTTTAGTTTTAC...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACACGTGACTGCCAGCTaGCAGGAGCGCTTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLHVTAS*QERFCS Trigger: CGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACCGTGGGACAGCTGCTaGGTTCCTGGCATGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLPWDSC*VPGMQG Trigger: GCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCGATCTCCTACGGACTGGCTCCAGACACCAAGAACTGGCTGGCGGGGGTGCCGTGGGACAGCTGCTaGGTTCCTGGCATGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSISYGLAPDTKNWLAGVPWDSC*VPGMQG Trigger: GCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGG...CACCCCCGCCAGCCAGTTCTTGGTGTCTGGAGCCAGTCCGTAGGAGATCGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACCCAGGATTATCACGTaGCTGCCAGCTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLPRIIT*LPAARS Trigger: GCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAACAGAGGGGCATGGGTaGGGGCCCACTCAGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLTEGHG*GPTQHR Trigger: TCTATGCTGAGTGGGCCCTCACCCATGCCCCTCTGT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGCTGGGTTCCTGGCATaGAAGGCCTTGCAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLAGFLA*KALQGT Trigger: AGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAACACATGGCTCCCTGTaGCCTCCACAGAGGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLTHGSL*PPQRGM Trigger: CATGCCCCTCTGTGGAGGCCACAGGGAGCCATGTGT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATGCACCACTGACCACTaGCCAGCAGGTGAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLCTTDH*PAGESP Trigger: AGGGCTTTCACCTGCTGGTCAGTGGTCAGTGGTGCA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACTCTGTGCCTGGATTTaGTGGCTGGGCTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLLCAWI*WLGCRT Trigger: AGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACTTGAGCTGGGTACCTaGAAACTCGGGGAGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLLELGT*KLGEEA Trigger: CGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGCTCCCACAGGGCAGTaGTCAGAGCCCATCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLAPTGQ*SEPITS Trigger: TGAAGTGATGGGCTCTGACCACTGCCCTGTGGGAGC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGCGGGTACACAGAGCTaGGCACTGTTTTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLAGTQS*ALFCWH Trigger: GTGCCAGCAAAACAGTGCCCAGCTCTGTGTACCCGC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATTCCCAGGATCCGCGTaGGGGCAGTACACATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLFPGSA*GQYTLI Trigger: GATCAATGTGTACTGCCCTCACGCGGATCCTGGGAA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLDRSAS*RSAAQA Trigger: AGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACATCCCCTGGGTTACTaGGCAAGCCATCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLHPLGY*ASHPST Trigger: AGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAAATGTGCGGATCTTGTaGTGTGTAAGGAGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLNVRIL*CVRRAR Trigger: CCGGGCCCTCCTTACACAGCACAAGATCCGCACATT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCGCGTCGCAAGGCCGTaGGACAGCTGCTGGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVRVARP*DSCWVP Trigger: AGGAACCCAGCAGCTGTCCCACGGCCTTGCGACGCG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLHRSGQ*VGGLYS Trigger: TGAATACAGCCCACCGACCCATTGACCACTGCGATG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACGAAGAATCTTGAGCTaGGTACCTGCAAACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLRRILS*VPANSG Trigger: CCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATCCACACCAGAAGTTTaGGAAAGGCTGGAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLSTPEV*ERLEEG Trigger: GCCTTCCTCCAGCCTTTCCCAAACTTCTGGTGTGGA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGGAAGCGAAGAATCTTaGGCTGGGTACCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLGSEES*AGYLQT Trigger: AGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCACGTGACTGCCAGCTaGCAGGAGCGCTTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVHVTAS*QERFCS Trigger: CGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATCCCGCACAGGTTCTTaGTCAAGAGGAACTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLSRTGS*SRGTRK Trigger: CTTCCTAGTTCCTCTTGAGCAAGAACCTGTGCGGGA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCCGTGGGACAGCTGCTaGGTTCCTGGCATGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVPWDSC*VPGMQG Trigger: GCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATATCTCCATTCAGGGTaGCAAACACACCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLYLHSG*QTHHSG Trigger: GCCTGAGTGGTGTGTTTGCCACCCTGAATGGAGATA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCGATCTCCTACGGACTGGCTCCAGACACCAAGAACTGGCTGGCGGGGGTGTATCTCCATTCAGGGTaGCAAACACACCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSISYGLAPDTKNWLAGVYLHSG*QTHHSG Trigger: GCCTGAGTGGTGTGTTTGCCACCCTGAATGGAGATA...CACCCCCGCCAGCCAGTTCTTGGTGTCTGGAGCCAGTCCGTAGGAGATCGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTCCACAGAGGGGCATaGGTGAGGGCCCACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVLHRGA*VRAHSA Trigger: TGCTGAGTGGGCCCTCACCCATGCCCCTCTGTGGAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGGAGTTCCTCTTGCGTaGACTCATCCATGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLGVPLA*THPCFH Trigger: ATGGAAACATGGATGAGTTCACGCAAGAGGAACTCC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGAGGGCAGTACACATTaGTCAGGGTCAAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLEGSTH*SGSKSS Trigger: AGAAGACTTTGACCCTGATCAATGTGTACTGCCCTC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCCCAGGATTATCACGTaGCTGCCAGCTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVPRIIT*LPAARS Trigger: GCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTACAGAGGGGCATGGGTaGGGGCCCACTCAGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSMTFCALHLVLSVSWPTEGHG*GPTQHR Trigger: TCTATGCTGAGTGGGCCCTCACCCATGCCCCTCTGT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGACAGAGGGGCATGGGTaGGGGCCCACTCAGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVTEGHG*GPTQHR Trigger: TCTATGCTGAGTGGGCCCTCACCCATGCCCCTCTGT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGCTGGGTTCCTGGCATaGAAGGCCTTGCAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVAGFLA*KALQGT Trigger: AGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAACCCGGAGTTCCTCTTaGGTGAACTCATCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLTRSSS*VNSSMF Trigger: AAACATGGATGAGTTCACGCAAGAGGAACTCCGGGT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACGAAGCCTGGTTGAATaGATGAAGGCTTTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLRSLVE*MKAFLG Trigger: GCCAAGAAAAGCCTTCATGCATTCAACCAGGCTTCG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATGTTGCCACCTCTTCTaGAGTCTTTGGGGTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLCCHLF*SLWGCK Trigger: CTTACAACCCCAAAGACTGCAGAAGAGGTGGCAACA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACATCTCTGGTCACTTTaGTCTCCTGGAGACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLHLWSL*SPGDRQ Trigger: TTGTCTGTCTCCAGGAGACCAAAGTGACCAGAGATG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACTGTCAGTACATCTCTaGTCACTTTGGTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLLSVHL*SLWSPG Trigger: TCCAGGAGACCAAAGTGACCAGAGATGTACTGACAG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATTCTTCAGCAGCTACTaGGGTAGCACTGTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLFFSSY*GSTVLT Trigger: TGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGACACATGGCTCCCTGTaGCCTCCACAGAGGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVTHGSL*PPQRGM Trigger: CATGCCCCTCTGTGGAGGCCACAGGGAGCCATGTGT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| 3UTR CAA 72 bp | AATATGTTACCACCTATGCTTAAGGAGCCAGCTGCCTaGGATGCCAGCTCCACCTGCACTCCCCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMLPPMLKEPAA*DASSTCTPPGA Trigger: AGCCCCAGGGGGAGTGCAGGTGGAGCTGGCATCCAAGGCAGCTGGCTCCTTAAGCATAGGTGGTAACATATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTCTGTGCCTGGATTTaGTGGCTGGGCTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVLCAWI*WLGCRT Trigger: AGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATTTCCGAAGCCTGGTTaGATGCATGAAGGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLASDPVHGVNTKTSLFPKPG*MHEGFS Trigger: AGAAAAGCCTTCATGCATTCAACCAGGCTTCGGAAA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTTGAGCTGGGTACCTaGAAACTCGGGGAGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVLELGT*KLGEEA Trigger: CGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGTGGTCAATGGGTCGGTaGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVWSMGR*AVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCA...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTTGGTCAATGGGTCGGTaGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSMTFCALHLVLSVSWPWSMGR*AVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCA...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGCTCCCACAGGGCAGTaGTCAGAGCCCATCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVAPTGQ*SEPITS Trigger: TGAAGTGATGGGCTCTGACCACTGCCCTGTGGGAGC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
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| CDS-3UTR CCA 90 bp | GAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATTCCACACCAGAAGTTTaGGAAAGGCTGGAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGLPLQDVSVAACNFCHSTPEV*ERLEEG Trigger: GCCTTCCTCCAGCCTTTCCCAAACTTCTGGTGTGGA...ATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTCCCTCCACCATGTCGCCTTGATAGTATCTCACTGGGTTACATGAGGACACATGGCTCCCTGTaGCCTCCACAGAGGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QLLPPPCRLDSISLGYMRTHGSL*PPQRGM Trigger: CATGCCCCTCTGTGGAGGCCACAGGGAGCCATGTGT...CCTCATGTAACCCAGTGAGATACTATCAAGGCGACATGGTGGAGGGAGGAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CAA 72 bp | GCCCAATCTTCTACAGAGGTGCAGCCTCTCTCAGCCTaGAAGCAGGCTGATCCAGACTTTGACCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQSSTEVQPLSA*KQADPDFDLAA Trigger: GGCAGCAAGGTCAAAGTCTGGATCAGCCTGCTTCAAGGCTGAGAGAGGCTGCACCTCTGTAGAAGATTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGTTCCCAGGATCCGCGTaGGGGCAGTACACATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVFPGSA*GQYTLI Trigger: GATCAATGTGTACTGCCCTCACGCGGATCCTGGGAA...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVDRSAS*RSAAQA Trigger: AGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCATCCCCTGGGTTACTaGGCAAGCCATCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVHPLGY*ASHPST Trigger: AGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGCACGTGACTGCCAGCTaGCAGGAGCGCTTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMHVTAS*QERFCS Trigger: CGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTG...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATTCCCGCACAGGTTCTTaGTCAAGAGGAACTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGLPLQDVSVAACNFCHSRTGS*SRGTRK Trigger: CTTCCTAGTTCCTCTTGAGCAAGAACCTGTGCGGGA...ATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATTATCTCCATTCAGGGTaGCAAACACACCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGLPLQDVSVAACNFCHYLHSG*QTHHSG Trigger: GCCTGAGTGGTGTGTTTGCCACCCTGAATGGAGATA...ATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTCCCTCCACCATGTCGCCTTGATAGTATCTCACTGGGTTACATGAGGGCGGGTACACAGAGCTaGGCACTGTTTTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLPPPCRLDSISLGYMRAGTQS*ALFCWH Trigger: GTGCCAGCAAAACAGTGCCCAGCTCTGTGTACCCGC...CCTCATGTAACCCAGTGAGATACTATCAAGGCGACATGGTGGAGGGAGGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGAGTACGCATCACACATaGCTCCCTGTGGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVSTHHT*LPVAST Trigger: TGTGGAGGCCACAGGGAGCCATGTGTGATGCGTACT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTCCCTCCACCATGTCGCCTTGATAGTATCTCACTGGGTTACATGAGGTTCCCAGGATCCGCGTaGGGGCAGTACACATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QLLPPPCRLDSISLGYMRFPGSA*GQYTLI Trigger: GATCAATGTGTACTGCCCTCACGCGGATCCTGGGAA...CCTCATGTAACCCAGTGAGATACTATCAAGGCGACATGGTGGAGGGAGGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTACCCAGGATTATCACGTaGCTGCCAGCTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHGHAFSGPKALYKESLPRIIT*LPAARS Trigger: GCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGG...TAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGGCTGGGTTCCTGGCATaGAAGGCCTTGCAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMAGFLA*KALQGT Trigger: AGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGC...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCACGTGACTGCCAGCTaGCAGGAGCGCTTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAMDMLFQAPKPFTKRVYHVTAS*QERFCS Trigger: CGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTG...ATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCCAATTTTCCCAGCCCTTAGCTTTCCTGGTTCTAAAGCTGATGCCAGATGGTCAATGGGTCGGTaGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPIFPALSFPGSKADARWSMGR*AVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCA...TCTGGCATCAGCTTTAGAACCAGGAAAGCTAAGGGCTGGGAAAATTGGCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVHRSGQ*VGGLYS Trigger: TGAATACAGCCCACCGACCCATTGACCACTGCGATG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCGAAGAATCTTGAGCTaGGTACCTGCAAACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVRRILS*VPANSG Trigger: CCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCCTGGATTTGATGGCTaGGCTGCAGGACTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVPGFDG*AAGLAV Trigger: AACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCAATTTTCCCAGCCCTTAGCTTTCCTGGTTCTAAAGCTGATGCCAGAGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPIFPALSFPGSKADARDRSAS*RSAAQA Trigger: AGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATC...TCTGGCATCAGCTTTAGAACCAGGAAAGCTAAGGGCTGGGAAAATTGGCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
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| CDS-3UTR TCA 90 bp | TGGCACACACCTTTAATTTTAGCACTGAGTAGGCAGAGGCACATAGCTCTCTGTCCCAGGATTATCACGTaGCTGCCAGCTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WHTPLILALSRQRHIALCPRIIT*LPAARS Trigger: GCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGG...ACAGAGAGCTATGTGCCTCTGCCTACTCAGTGCTAAAATTAAAGGTGTGTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
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| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGCCTGGTTGAATGCATaGAGGCTTTTCTTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVAWLNA*RLFLAV Trigger: GACAGCCAAGAAAAGCCTTCATGCATTCAACCAGGC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
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| CDS-3UTR TCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTGCCTGGTTGAATGCATaGAGGCTTTTCTTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSMTFCALHLVLSVSWPAWLNA*RLFLAV Trigger: GACAGCCAAGAAAAGCCTTCATGCATTCAACCAGGC...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGCTTGAGCTGGGTACCTaGAAACTCGGGGAGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMLELGT*KLGEEA Trigger: CGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAG...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| CDS-3UTR CCA 90 bp | ACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAATTTTTGGTCAATGGGTCGGTaGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLSCAQHYSVLAAPANFWSMGR*AVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCA...AAAATTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
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| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCATCCACTTACGCCCTaGGTCCTCTTCAAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVHPLTP*VLFKAF Trigger: GAATGCTTTGAAGAGGACCCAGGGCGTAAGTGGATG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
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| CDS-3UTR CCA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGCATCCACTTACGCCCTaGGTCCTCTTCAAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AKVAIFPETYGNSNPGPLHPLTP*VLFKAF Trigger: GAATGCTTTGAAGAGGACCCAGGGCGTAAGTGGATG...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGAGCCCTCTGCTGTTTTaGATGCAAGTAGCGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVSPLLF*MQVAVA Trigger: AGCTACCGCTACTTGCATCCAAAACAGCAGAGGGCT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
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| CDS-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTAGCCCTCTGCTGTTTTaGATGCAAGTAGCGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSMTFCALHLVLSVSWPSPLLF*MQVAVA Trigger: AGCTACCGCTACTTGCATCCAAAACAGCAGAGGGCT...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGGAGTTCCTCTTGCGTaGACTCATCCATGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVGVPLA*THPCFH Trigger: ATGGAAACATGGATGAGTTCACGCAAGAGGAACTCC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
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| CDS-3UTR TCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGAGGGCAGTACACATTaGTCAGGGTCAAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVEGSTH*SGSKSS Trigger: AGAAGACTTTGACCCTGATCAATGTGTACTGCCCTC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | ACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAATTTTGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLSCAQHYSVLAAPANFDRSAS*RSAAQA Trigger: AGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATC...AAAATTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAAGGTGAAGGAAGAAGCTTGGCTACAGTATACAAGGTCTTCACAGCAACCCAGGATTATCACGTaGCTGCCAGCTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCKVKEEAWLQYTRSSQQPRIIT*LPAARS Trigger: GCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGG...TTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTCCCTCCACCATGTCGCCTTGATAGTATCTCACTGGGTTACATGAGGGGAAGCGAAGAATCTTaGGCTGGGTACCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QLLPPPCRLDSISLGYMRGSEES*AGYLQT Trigger: AGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCC...CCTCATGTAACCCAGTGAGATACTATCAAGGCGACATGGTGGAGGGAGGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGACCCGGAGTTCCTCTTaGGTGAACTCATCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVTRSSS*VNSSMF Trigger: AAACATGGATGAGTTCACGCAAGAGGAACTCCGGGT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGAATGTGCGGATCTTGTaGTGTGTAAGGAGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMNVRIL*CVRRAR Trigger: CCGGGCCCTCCTTACACAGCACAAGATCCGCACATT...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | ATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAAAATGTGCGGATCTTGTaGTGTGTAAGGAGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: INLSILCTALQCLSCSCQNVRIL*CVRRAR Trigger: CCGGGCCCTCCTTACACAGCACAAGATCCGCACATT...TTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGAGCTGGGCACTGTTTTaGTGGCACACAGGATACATT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVSWALF*WHTGYI Trigger: AATGTATCCTGTGTGCCAGCAAAACAGTGCCCAGCT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGTGTTGCCACCTCTTCTaGAGTCTTTGGGGTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKVAIFPETYGNSNPGPLCCHLF*SLWGCK Trigger: CTTACAACCCCAAAGACTGCAGAAGAGGTGGCAACA...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCATCTCTGGTCACTTTaGTCTCCTGGAGACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVHLWSL*SPGDRQ Trigger: TTGTCTGTCTCCAGGAGACCAAAGTGACCAGAGATG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTGTCAGTACATCTCTaGTCACTTTGGTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVLSVHL*SLWSPG Trigger: TCCAGGAGACCAAAGTGACCAGAGATGTACTGACAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | CTCCCTAGTATGACATTCTGTGCTTTGCACCTGGTGCTGTCTGTGTCCTGGCCTCTGTCAGTACATCTCTaGTCACTTTGGTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSMTFCALHLVLSVSWPLSVHL*SLWSPG Trigger: TCCAGGAGACCAAAGTGACCAGAGATGTACTGACAG...AGGCCAGGACACAGACAGCACCAGGTGCAAAGCACAGAATGTCATACTAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGTTCTTCAGCAGCTACTaGGGTAGCACTGTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVFFSSY*GSTVLT Trigger: TGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAA...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGTTCTTCAGCAGCTACTaGGGTAGCACTGTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AKVAIFPETYGNSNPGPLFFSSY*GSTVLT Trigger: TGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAA...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGTCTCTTCTAGCATTGTaGCTGTTGCCACCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVSLLAL*LLPPLL Trigger: CAGAAGAGGTGGCAACAGCCACAATGCTAGAAGAGA...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR TCA 90 bp | TGGCACACACCTTTAATTTTAGCACTGAGTAGGCAGAGGCACATAGCTCTCTGTTTCCCAGGATCCGCGTaGGGGCAGTACACATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: WHTPLILALSRQRHIALCFPGSA*GQYTLI Trigger: GATCAATGTGTACTGCCCTCACGCGGATCCTGGGAA...ACAGAGAGCTATGTGCCTCTGCCTACTCAGTGCTAAAATTAAAGGTGTGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR TCA 90 bp | CTTTATCTTTGGGAAACAAAAGATGGGTGTGGATGGAGTCCCATAGGTAAGTGGTGCACCACTGACCACTaGCCAGCAGGTGAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLWETKDGCGWSPIGKWCTTDH*PAGESP Trigger: AGGGCTTTCACCTGCTGGTCAGTGGTCAGTGGTGCA...CCACTTACCTATGGGACTCCATCCACACCCATCTTTTGTTTCCCAAAGATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTCCCTCCACCATGTCGCCTTGATAGTATCTCACTGGGTTACATGAGGAGCTGGGCACTGTTTTaGTGGCACACAGGATACATT | + |
|
Preference number: 4 (lower is better) Translates to: QLLPPPCRLDSISLGYMRSWALF*WHTGYI Trigger: AATGTATCCTGTGTGCCAGCAAAACAGTGCCCAGCT...CCTCATGTAACCCAGTGAGATACTATCAAGGCGACATGGTGGAGGGAGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGTCACTTTGGTCTCCTaGAGACAGACAATATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVVTLVS*RQTISA Trigger: TGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGAC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGGTCACTTTGGTCTCCTaGAGACAGACAATATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKVAIFPETYGNSNPGPLVTLVS*RQTISA Trigger: TGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGAC...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGCCTGGATTTGATGGCTaGGCTGCAGGACTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMPGFDG*AAGLAV Trigger: AACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGG...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTCCCTTCTCATCTTTaGACTCTGGAACCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVLPSHL*TLEPCS Trigger: AGAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGCTCCCTTCTCATCTTTaGACTCTGGAACCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKVAIFPETYGNSNPGPLLPSHL*TLEPCS Trigger: AGAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAG...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCCAATTTTCCCAGCCCTTAGCTTTCCTGGTTCTAAAGCTGATGCCAGAGGAGTTCCTCTTGCGTaGACTCATCCATGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPIFPALSFPGSKADARGVPLA*THPCFH Trigger: ATGGAAACATGGATGAGTTCACGCAAGAGGAACTCC...TCTGGCATCAGCTTTAGAACCAGGAAAGCTAAGGGCTGGGAAAATTGGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAAGGTGAAGGAAGAAGCTTGGCTACAGTATACAAGGTCTTCACAGCAAGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FCKVKEEAWLQYTRSSQQDRSAS*RSAAQA Trigger: AGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATC...TTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTCATCTTTGGACTCTaGAACCTTGTTCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SREQKEAFIGRDLASDPVLIFGL*NLVLLF Trigger: GAAGAGAAGAACAAGGTTCCAGAGTCCAAAGATGAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| 3UTR CAA 72 bp | TCCCTGAATAAAGCCTCATGTGGTTTGCCATCAAGCTaGGTCTCTCGTGAGTTGTTGGGTGTCCGCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLNKASCGLPSS*VSRELLGVRYC Trigger: ACAATAGCGGACACCCAACAACTCACGAGAGACCAAGCTTGATGGCAAACCACATGAGGCTTTATTCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| CDS-3UTR TCA 90 bp | ATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAAGAGGGCAGTACACATTaGTCAGGGTCAAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INLSILCTALQCLSCSCQEGSTH*SGSKSS Trigger: AGAAGACTTTGACCCTGATCAATGTGTACTGCCCTC...TTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR TCA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCCTCTGTGCCTGGATTTaGTGGCTGGGCTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IQSIQVLSLCFALLTSSFLCAWI*WLGCRT Trigger: AGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAG...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR GCA 90 bp | ATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAAACCCGGAGTTCCTCTTaGGTGAACTCATCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INLSILCTALQCLSCSCQTRSSS*VNSSMF Trigger: AAACATGGATGAGTTCACGCAAGAGGAACTCCGGGT...TTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTTGATTATTCTTCTAGTTTGTCACGTGACTGCCAGCTaGCAGGAGCGCTTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLVHFAVSLIILLVCHVTAS*QERFCS Trigger: CGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTG...ACAAACTAGAAGAATAATCAAGCTAACTGCAAAGTGAACAAGAACTGGGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | TATAAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGCCGTGGGACAGCTGCTaGGTTCCTGGCATGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKTLDHRHNSAQFLFTLQPWDSC*VPGMQG Trigger: GCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGG...CTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | ATTAACCTCTCTATCCTGTGCACAGCACTACAGTGTCTTAGCTGCTCCTGCCAACTGTCAGTACATCTCTaGTCACTTTGGTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: INLSILCTALQCLSCSCQLSVHL*SLWSPG Trigger: TCCAGGAGACCAAAGTGACCAGAGATGTACTGACAG...TTGGCAGGAGCAGCTAAGACACTGTAGTGCTGTGCACAGGATAGAGAGGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | TATAAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGGCTGGGTTCCTGGCATaGAAGGCCTTGCAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YKTLDHRHNSAQFLFTLQAGFLA*KALQGT Trigger: AGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGC...CTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTGGGTTCCTGGCATaGAAGGCCTTGCAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLAGFLA*KALQGT Trigger: AGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGC...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTAGTCACTTTGGTCTCCTaGAGACAGACAATATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHGHAFSGPKALYKESLVTLVS*RQTISA Trigger: TGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGAC...TAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCATCTTTTGAGCCCTTACCAGAATTAACCTCTCTATCCTGTGCACAGCACTATCTCCATTCAGGGTaGCAAACACACCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSFEPLPELTSLSCAQHYLHSG*QTHHSG Trigger: GCCTGAGTGGTGTGTTTGCCACCCTGAATGGAGATA...GTGCTGTGCACAGGATAGAGAGGTTAATTCTGGTAAGGGCTCAAAAGATGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | ATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCAAGTCCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: MDMLFQAPKPFTKRVYQVHRSGQ*VGGLYS Trigger: TGAATACAGCCCACCGACCCATTGACCACTGCGATG...GACTTGATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCAGTACGCATCACACATaGCTCCCTGTGGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IQSIQVLSLCFALLTSSFSTHHT*LPVAST Trigger: TGTGGAGGCCACAGGGAGCCATGTGTGATGCGTACT...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CAA 72 bp | CCCATTGATGAAGCCCACTGCCAGGTGTTTGTGATATaGGTTGCTAAGATAGAGTCAGAAAATCTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIDEAHCQVFVI*VAKIESENLPS Trigger: GCTGGGGAGATTTTCTGACTCTATCTTAGCAACCAATATCACAAACACCTGGCAGTGGGCTTCATCAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR CAA 72 bp | GGATTTCCTATCCTTCTGCAAGGTGAAGGAAGAAGCTaGGCTACAGTATACAAGGTCTTCACAGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFPILLQGEGRS*ATVYKVFTARL Trigger: GAGCCTTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAAGGATAGGAAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATCTTTGGGAAACAAAAGATGGGTGTGGATGGAGTCCCATAGGTAAGTGGGGAGTTCCTCTTGCGTaGACTCATCCATGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYLWETKDGCGWSPIGKWGVPLA*THPCFH Trigger: ATGGAAACATGGATGAGTTCACGCAAGAGGAACTCC...CCACTTACCTATGGGACTCCATCCACACCCATCTTTTGTTTCCCAAAGATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCATCTTTTGAGCCCTTACCAGAATTAACCTCTCTATCCTGTGCACAGCACGGAGTTCCTCTTGCGTaGACTCATCCATGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSFEPLPELTSLSCAQHGVPLA*THPCFH Trigger: ATGGAAACATGGATGAGTTCACGCAAGAGGAACTCC...GTGCTGTGCACAGGATAGAGAGGTTAATTCTGGTAAGGGCTCAAAAGATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAAGGTGAAGGAAGAAGCTTGGCTACAGTATACAAGGTCTTCACAGCAACGAAGCCTGGTTGAATaGATGAAGGCTTTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCKVKEEAWLQYTRSSQQRSLVE*MKAFLG Trigger: GCCAAGAAAAGCCTTCATGCATTCAACCAGGCTTCG...TTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCATCTTTTGAGCCCTTACCAGAATTAACCTCTCTATCCTGTGCACAGCACTTCTTCAGCAGCTACTaGGGTAGCACTGTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: FSSFEPLPELTSLSCAQHFFSSY*GSTVLT Trigger: TGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAA...GTGCTGTGCACAGGATAGAGAGGTTAATTCTGGTAAGGGCTCAAAAGATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQSIQVLSLCFALLTSSFHRSGQ*VGGLYS Trigger: TGAATACAGCCCACCGACCCATTGACCACTGCGATG...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGCATCTTCCAGCACCTGTAGGCAATTTAAAATCAAGATGAAGAGCTATCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPASSSTCRQFKIKMKSYHRSGQ*VGGLYS Trigger: TGAATACAGCCCACCGACCCATTGACCACTGCGATG...ATAGCTCTTCATCTTGATTTTAAATTGCCTACAGGTGCTGGAAGATGCAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| 3UTR CAA 72 bp | AATCCAGAGTTGCTACACCTGCACCAGACTCTTTCCTaGTACCCCTCCCATACCCATTTCTTAAGAATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPELLHLHQTLS*YPSHTHFLRID Trigger: GTCTATTCTTAAGAAATGGGTATGGGAGGGGTACAAGGAAAGAGTCTGGTGCAGGTGTAGCAACTCTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATGGTGATGAAAGATCCTaGCAGAATGTAAAAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAMDMLFQAPKPFTKRVYGDERS*QNVKGH Trigger: GTGACCTTTTACATTCTGTCAGGATCTTTCATCACC...ATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112727.10 |
||
| 3UTR CAA 72 bp | ATCTATCATGTTCTTATTGTGGGCTGGGCACTGTGCTaGAGAGCGAGGAATAGACAAAACACAGAACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IYHVLIVGWALC*RARNRQNTEPF Trigger: AAAGGGTTCTGTGTTTTGTCTATTCCTCGCTCTCAAGCACAGTGCCCAGCCCACAATAAGAACATGATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | TGTAAAACTAAAATCTTTGTTTCCAGCTGGAACTCCATCTTCTCTCTCCATATTTTCCCAGGATCCGCGTaGGGGCAGTACACATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: CKTKIFVSSWNSIFSLHIFPGSA*GQYTLI Trigger: GATCAATGTGTACTGCCCTCACGCGGATCCTGGGAA...AATATGGAGAGAGAAGATGGAGTTCCAGCTGGAAACAAAGATTTTAGTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR TCA 90 bp | ATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCAAGTCAAACTTCAGAGGCCTTaGACAGAAACGAGTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MDMLFQAPKPFTKRVYQVKLQRP*TETSLD Trigger: GTCAAGACTCGTTTCTGTTCAAGGCCTCTGAAGTTT...GACTTGATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112725.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAAGGTGAAGGAAGAAGCTTGGCTACAGTATACAAGGTCTTCACAGCAACTCATCTTTGGACTCTaGAACCTTGTTCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCKVKEEAWLQYTRSSQQLIFGL*NLVLLF Trigger: GAAGAGAAGAACAAGGTTCCAGAGTCCAAAGATGAG...TTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| 3UTR CAA 72 bp | TCCTGCTCTCTGCTTTCCTGTGTGCTTCTGGCTGACTaGATTCTGAAAATAAAGAGCAACTTGAAACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLSCVLLAD*ILKIKSNLKHS Trigger: TGAATGTTTCAAGTTGCTCTTTATTTTCAGAATCAAGTCAGCCAGAAGCACACAGGAAAGCAGAGAGCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR TCA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGAGGGCAGTACACATTaGTCAGGGTCAAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLEGSTH*SGSKSS Trigger: AGAAGACTTTGACCCTGATCAATGTGTACTGCCCTC...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTTGATTATTCTTCTAGTTTGTACCCGGAGTTCCTCTTaGGTGAACTCATCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLVHFAVSLIILLVCTRSSS*VNSSMF Trigger: AAACATGGATGAGTTCACGCAAGAGGAACTCCGGGT...ACAAACTAGAAGAATAATCAAGCTAACTGCAAAGTGAACAAGAACTGGGCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | TATAAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGCATCTCTGGTCACTTTaGTCTCCTGGAGACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: YKTLDHRHNSAQFLFTLQHLWSL*SPGDRQ Trigger: TTGTCTGTCTCCAGGAGACCAAAGTGACCAGAGATG...CTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | AAAACATTAGACCATAGACACAATTCAGCCCAGTTCTTGTTCACTTTGCAGTTACATCTCTGGTCACTTTaGTCTCCTGGAGACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KTLDHRHNSAQFLFTLQLHLWSL*SPGDRQ Trigger: TTGTCTGTCTCCAGGAGACCAAAGTGACCAGAGATG...TAACTGCAAAGTGAACAAGAACTGGGCTGAATTGTGTCTATGGTCTAATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGCCCAGTTCTTGTTCACTTTGCAGTTAGCTTGATTATTCTTCTAGTTTGTCTGTCAGTACATCTCTaGTCACTTTGGTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLVHFAVSLIILLVCLSVHL*SLWSPG Trigger: TCCAGGAGACCAAAGTGACCAGAGATGTACTGACAG...ACAAACTAGAAGAATAATCAAGCTAACTGCAAAGTGAACAAGAACTGGGCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS-3UTR CCA 90 bp | TGTAAAACTAAAATCTTTGTTTCCAGCTGGAACTCCATCTTCTCTCTCCATATTGTCACTTTGGTCTCCTaGAGACAGACAATATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKTKIFVSSWNSIFSLHIVTLVS*RQTISA Trigger: TGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGAC...AATATGGAGAGAGAAGATGGAGTTCCAGCTGGAAACAAAGATTTTAGTTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| 3UTR CAA 72 bp | TTCTCTAAGTGTATCCAATCAATTCAAGTTCTCTCCTaGTGCTTCGCTCTCTTGACTTCATCATTCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCIQSIQVLS*CFALLTSSFII Trigger: GATAATGAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGATACACTTAGAGAA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS GCA 90 bp | CAGCATCCAGCTCGTCCAAAACGCGTCGCAAGGCCGTGGGACAGCTaGTGGGTTCCTGGCATGCAAGGCCTTGCAGGGGACTCCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: QHPARPKRVARPWDS*WVPGMQGLAGDSGS Trigger: GGATCCGGAGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGGCCTTGCGACGCGTTTTGGACGAGCTGGATGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS CCA 90 bp | CATCCAGCTCGTCCAAAACGCGTCGCAAGGCCGTGGGACAGCTGCTaGGTTCCTGGCATGCAAGGCCTTGCAGGGGACTCCGGATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPARPKRVARPWDSC*VPGMQGLAGDSGSH Trigger: ATGGGATCCGGAGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGGCCTTGCGACGCGTTTTGGACGAGCTGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS TCA 90 bp | GGAGCGCTTCTGCTCGCATCTGGAGCAGGCGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCTTCCCAGGATCCGCGTGAGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GALLLASGAGDRSAS*RSAAQASQDPREGS Trigger: ACTGCCCTCACGCGGATCCTGGGAAGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATCGCCTGCTCCAGATGCGAGCAGAAGCGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS GCA 90 bp | CAAAACGCGTCGCAAGGCCGTGGGACAGCTGCTGGGTTCCTGGCATaGAAGGCCTTGCAGGGGACTCCGGATCCCATTGATGTTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNASQGRGTAAGFLA*KALQGTPDPIDVPA Trigger: AGCTGGAACATCAATGGGATCCGGAGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGGCCTTGCGACGCGTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAGGACTCCGGATCCCATaGATGTTCCAGCTTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLGLRIP*MFQLTT Trigger: CGTGGTAAGCTGGAACATCAATGGGATCCGGAGTCC...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACTCCACACCAGAAGTTaGGGAAAGGCTGGAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLLHTRS*GKAGGR Trigger: CCTTCCTCCAGCCTTTCCCAAACTTCTGGTGTGGAG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS GCA 90 bp | GTCCCCCAGGATTATCACGTGACTGCCAGCTGCCAGGAGCGCTTCTaGTCGCATCTGGAGCAGGCGATAGAAGCGCATCTTGAAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPQDYHVTASCQERF*SHLEQAIEAHLEGQ Trigger: CTGACCTTCAAGATGCGCTTCTATCGCCTGCTCCAGATGCGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAAAGCCCTCTGCTGTTTaGGATGCAAGTAGCGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLKPSAV*DASSGS Trigger: GCTACCGCTACTTGCATCCAAAACAGCAGAGGGCTT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTACTAGCATTGTGGCTGTaGCCACCTCTTCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLLALWL*PPLLQS Trigger: AGACTGCAGAAGAGGTGGCAACAGCCACAATGCTAG...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 90 bp | GTAGCTATCCATGAAGAGCCCTATGTGGGGTCCAGCCTCATCCCCTaGGTTACTGAGCAAGCCATCCATCCACTTACGCCCTGGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VAIHEEPYVGSSLIP*VTEQAIHPLTPWVL Trigger: GAGGACCCAGGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATGAGGCTGGACCCCACATAGGGCTCTTCATGGATAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAACATCTCTGGTCACTTaGGTCTCCTGGAGACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLTSLVT*VSWRQT Trigger: TGTCTGTCTCCAGGAGACCAAAGTGACCAGAGATGT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTAAGGAAGCGAAGAATCTaGAGCTGGGTACCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLRKRRI*SWVPAN Trigger: GTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCT...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 90 bp | GTGTGGCCACAGGCAGCTACAGGCAACAGACTACTTGCATCGCAGTaGTCAATGGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTATC | + |
|
Preference number: 5 (lower is better) Translates to: VWPQAATGNRLLASQ*SMGRWAVFRSPRII Trigger: GATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGTTGCCTGTAGCTGCCTGTGGCCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS CCA 90 bp | AGCAGCTACTGGGGTAGCACTGTCCTTACAGAAGGTAGCCACACCTaGGGACGGACAAGAGCATTCAGAATAGCCACTACGGCTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSYWGSTVLTEGSHT*GRTRAFRIATTAAA Trigger: AGCCGCAGCCGTAGTGGCTATTCTGAATGCTCTTGTCCGTCCCCAGGTGTGGCTACCTTCTGTAAGGACAGTGCTACCCCAGTAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112721.10 |
||
| CDS CCA 90 bp | ATTCAGGGTGGCAAACACACCACTCAGGCCTTCTTCAGCAGCTACTaGGGTAGCACTGTCCTTACAGAAGGTAGCCACACCTGGGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: IQGGKHTTQAFFSSY*GSTVLTEGSHTWGR Trigger: CCGTCCCCAGGTGTGGCTACCTTCTGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAAGGCCTGAGTGGTGTGTTTGCCACCCTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATCTCCACACCAGAAGTTaGGGAAAGGCTGGAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVGLPLQDVSVAACNFCHLHTRS*GKAGGR Trigger: CCTTCCTCCAGCCTTTCCCAAACTTCTGGTGTGGAG...ATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATCTCCCTTCTCATCTTaGGACTCTGGAACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLSPFSS*DSGTLF Trigger: GAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAGA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS TCA 90 bp | TCAGCCGCTCAGGCTTCCCAGGATCCGCGTGAGGGCAGTACACATTaGTCAGGGTCAAAGTCTTCTCCTTCCCTTCCAATGTGCGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SAAQASQDPREGSTH*SGSKSSPSLPMCGS Trigger: AGATCCGCACATTGGAAGGGAAGGAGAAGACTTTGACCCTGATCAATGTGTACTGCCCTCACGCGGATCCTGGGAAGCCTGAGCGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS TCA 90 bp | AAGCGCATCTTGAAGGTCAGCCGCTCAGGCTTCCCAGGATCCGCGTaGGGGCAGTACACATTGATCAGGGTCAAAGTCTTCTCCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRILKVSRSGFPGSA*GQYTLIRVKVFSFP Trigger: AGGGAAGGAGAAGACTTTGACCCTGATCAATGTGTACTGCCCTCACGCGGATCCTGGGAAGCCTGAGCGGCTGACCTTCAAGATGCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS CCA 90 bp | CACAGGCAGCTACAGGCAACAGACTACTTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTATCACGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRQLQATDYLHRSGQ*VGGLYSGPPGLSRD Trigger: GTCACGTGATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGTTGCCTGTAGCTGCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS CCA 90 bp | CTCTCCCATACAGGTCCGGCCTCCCATTCAGGAACTAAGTTAGTGTaGCCACAGGCAGCTACAGGCAACAGACTACTTGCATCGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHTGPASHSGTKLV*PQAATGNRLLASQW Trigger: CCACTGCGATGCAAGTAGTCTGTTGCCTGTAGCTGCCTGTGGCCACACTAACTTAGTTCCTGAATGGGAGGCCGGACCTGTATGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS CCA 90 bp | CTCATCCCCTGGGTTACTGAGCAAGCCATCCATCCACTTACGCCCTaGGTCCTCTTCAAAGCATTCCAGACTACTTGCATCGCAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIPWVTEQAIHPLTP*VLFKAFQTTCIAVV Trigger: GACCACTGCGATGCAAGTAGTCTGGAATGCTTTGAAGAGGACCCAGGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS CCA 90 bp | ACAGGTTCTTGCTCAAGAGGAACTAGGAAGCGAAGAATCTTGAGCTaGGTACCTGCAAACTCGGGGAGGAAGCGGGTACACAGAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSCSRGTRKRRILS*VPANSGRKRVHRAG Trigger: CCCAGCTCTGTGTACCCGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCTAGTTCCTCTTGAGCAAGAACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGGGACTCCGGATCCCATaGATGTTCCAGCTTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: SREQKEAFIGRDLASDPVGLRIP*MFQLTT Trigger: CGTGGTAAGCTGGAACATCAATGGGATCCGGAGTCC...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACCTGGCATCTGACCCCGTGCACGGGGTGAACACGAAGACATCCCTATTGGACTCTGGAACCTaGTTCTTCTCTTCTAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRDLASDPVHGVNTKTSLLDSGT*FFSSSI Trigger: AATGCTAGAAGAGAAGAACAAGGTTCCAGAGTCCAA...TAGGGATGTCTTCGTGTTCACCCCGTGCACGGGGTCAGATGCCAGGTCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS TCA 90 bp | GTCAAGTCTAGAGCCATAGTTGAGATGGCGTGCACCACTGACCACTaGCCAGCAGGTGAAAGCCCTCTGCTGTTTTGGATGCAAGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VKSRAIVEMACTTDH*PAGESPLLFWMQVA Trigger: CGCTACTTGCATCCAAAACAGCAGAGGGCTTTCACCTGCTGGTCAGTGGTCAGTGGTGCACGCCATCTCAACTATGGCTCTAGACTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS TCA 90 bp | GTTGAATGCATGAAGGCTTTTCTTGGCTGTCTCTGTGCCTGGATTTaGTGGCTGGGCTGCAGGACTTGCTGTTCCCGCACAGGTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VECMKAFLGCLCAWI*WLGCRTCCSRTGSC Trigger: GCAAGAACCTGTGCGGGAACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAGACAGCCAAGAAAAGCCTTCATGCATTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 90 bp | ATTCAGGGTGGCAAACACACCACTCAGGCCTTCTTCAGCAGCTACTaGGGTAGCACTGTCCTTACAGAAGGTAGCCACACCAGAATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IQGGKHTTQAFFSSY*GSTVLTEGSHTRIA Trigger: GGCTATTCTGGTGTGGCTACCTTCTGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAAGGCCTGAGTGGTGTGTTTGCCACCCTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS CCA 90 bp | GGTCCTCTTCAAAGCATTCCAGACTACTTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTATCACGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPLQSIPDYLHRSGQ*VGGLYSGPPGLSRD Trigger: GTCACGTGATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGAATGCTTTGAAGAGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS CCA 90 bp | TTTGCTGGCACACAGGATACATTTAAGACAGCTCCCACAGGGCAGTaGTCAGAGCCCATCACTTCAGGGAGTAAGAAGGAGGCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FAGTQDTFKTAPTGQ*SEPITSGSKKEAWK Trigger: CTTCCAGGCCTCCTTCTTACTCCCTGAAGTGATGGGCTCTGACCACTGCCCTGTGGGAGCTGTCTTAAATGTATCCTGTGTGCCAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 90 bp | GGTTTAGAGGGAACCTTACCAGACTACTTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTATCACGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLEGTLPDYLHRSGQ*VGGLYSGPPGLSRD Trigger: GTCACGTGATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGTAAGGTTCCCTCTAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112719.2 |
||
| CDS CCA 90 bp | GGCCTATGGTTTAGAGGGAACCTTACCAGACTACTTGCATCGCAGTaGTCAATGGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTATC | + |
|
Preference number: 5 (lower is better) Translates to: GLWFRGNLTRLLASQ*SMGRWAVFRSPRII Trigger: GATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGTAAGGTTCCCTCTAAACCATAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112719.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGAAGCCCTCTGCTGTTTaGGATGCAAGTAGCGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SREQKEAFIGRDLASDPVKPSAV*DASSGS Trigger: GCTACCGCTACTTGCATCCAAAACAGCAGAGGGCTT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGCTAGCATTGTGGCTGTaGCCACCTCTTCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SREQKEAFIGRDLASDPVLALWL*PPLLQS Trigger: AGACTGCAGAAGAGGTGGCAACAGCCACAATGCTAG...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGAGCATTCCAGACTACTaGCATCGCAGTGGTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SREQKEAFIGRDLASDPVSIPDY*HRSGQW Trigger: CCATTGACCACTGCGATGCAAGTAGTCTGGAATGCT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGAGCATTCCAGACTACTaGCATCGCAGTGGTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: AKVAIFPETYGNSNPGPLSIPDY*HRSGQW Trigger: CCATTGACCACTGCGATGCAAGTAGTCTGGAATGCT...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGAGGAAGCGAAGAATCTaGAGCTGGGTACCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SREQKEAFIGRDLASDPVRKRRI*SWVPAN Trigger: GTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCT...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS-3UTR CAA 90 bp | GGGAACAAGAAGTACTATAGGCAGGTACTGGCTTGGAGGAGGACCATATACATGGGACTCCGGATCCCATaGATGTTCCAGCTTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: GNKKYYRQVLAWRRTIYMGLRIP*MFQLTT Trigger: CGTGGTAAGCTGGAACATCAATGGGATCCGGAGTCC...CATGTATATGGTCCTCCTCCAAGCCAGTACCTGCCTATAGTACTTCTTGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGCTGCCCCTCCAAGATGTGTCTGTGGCTGCATGCAACTTCTGTCATTTGGACTCTGGAACCTaGTTCTTCTCTTCTAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: EVGLPLQDVSVAACNFCHLDSGT*FFSSSI Trigger: AATGCTAGAAGAGAAGAACAAGGTTCCAGAGTCCAA...ATGACAGAAGTTGCATGCAGCCACAGACACATCTTGGAGGGGCAGCCCCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGTGGCCATCTTCCCTGAGACTTATGGTAACTCAAACCCTGGACCTCTGTCTCCCTTCTCATCTTaGGACTCTGGAACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AKVAIFPETYGNSNPGPLSPFSS*DSGTLF Trigger: GAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAGA...CAGAGGTCCAGGGTTTGAGTTACCATAAGTCTCAGGGAAGATGGCCACCTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGAACAAAAAGAAGCCTTCATAGGCAGGGACCTGGCATCTGACCCCGTGTCTCCCTTCTCATCTTaGGACTCTGGAACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SREQKEAFIGRDLASDPVSPFSS*DSGTLF Trigger: GAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAGA...CACGGGGTCAGATGCCAGGTCCCTGCCTATGAAGGCTTCTTTTTGTTCTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 90 bp | CTGTCAGTACATCTCCGTAGAGATCTTGGATTCTCGAATGCTCACTaGTCACTTTGGTCTCCTGGAGACAGACAATATCAGCATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSVHLRRDLGFSNAH*SLWSPGDRQYQHPA Trigger: AGCTGGATGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGACCAGTGAGCATTCGAGAATCCAAGATCTCTACGGAGATGTACTGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140207.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAAGGTGAAGGAAGAAGCTTGGCTACAGTATACAAGGTCTTCACAGCAACTAGCATTGTGGCTGTaGCCACCTCTTCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FCKVKEEAWLQYTRSSQQLALWL*PPLLQS Trigger: AGACTGCAGAAGAGGTGGCAACAGCCACAATGCTAG...TTGCTGTGAAGACCTTGTATACTGTAGCCAAGCTTCTTCCTTCACCTTGCAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGACATGCTTTTTCAGGCCCCAAAGCCCTTTACAAAGAGAGTTTATCAAGAAGGTCTCAGTAGGCTaGCAGTGTGGTGATGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWTCFFRPQSPLQREFIKKVSVG*QCGDER Trigger: TCTTTCATCACCACACTGCAAGCCTACTGAGACCTT...CTTGATAAACTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112727.10 |
||
| CDS-3UTR CAA 90 bp | ATCCAATCAATTCAAGTTCTCTCCTTGTGCTTCGCTCTCTTGACTTCATCATTCAGGAAGCGAAGAATCTaGAGCTGGGTACCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQSIQVLSLCFALLTSSFRKRRI*SWVPAN Trigger: GTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCT...GAATGATGAAGTCAAGAGAGCGAAGCACAAGGAGAGAACTTGAATTGATTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112720.8 |
||
| CDS-3UTR CAA 90 bp | TGTAAAACTAAAATCTTTGTTTCCAGCTGGAACTCCATCTTCTCTCTCCATATTGGACTCCGGATCCCATaGATGTTCCAGCTTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: CKTKIFVSSWNSIFSLHIGLRIP*MFQLTT Trigger: CGTGGTAAGCTGGAACATCAATGGGATCCGGAGTCC...AATATGGAGAGAGAAGATGGAGTTCCAGCTGGAAACAAAGATTTTAGTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS TCA 90 bp | AATATGAAGGTCTCAGTAGGCTTGCAGTGTGGTGATGAAAGATCCTaGCAGAATGTAAAAGGTCACAGAAGCCCTCCATTATTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NMKVSVGLQCGDERS*QNVKGHRSPPLFLS Trigger: TGAGAGAAATAATGGAGGGCTTCTGTGACCTTTTACATTCTGTCAGGATCTTTCATCACCACACTGCAAGCCTACTGAGACCTTCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112727.10 |
||
| CDS GCA 72 bp | GCTCGTCCAAAACGCGTCGCAAGGCCGTGGGACAGCTaGTGGGTTCCTGGCATGCAAGGCCTTGCAGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ARPKRVARPWDS*WVPGMQGLAGD Trigger: GTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGCAGCTGTCCCACGGCCTTGCGACGCGTTTTGGACGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS TCA 72 bp | CTGCTCGCATCTGGAGCAGGCGATAGAAGCGCATCTTaGAGGTCAGCCGCTCAGGCTTCCCAGGATCCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLASGAGDRSAS*RSAAQASQDPR Trigger: ACGCGGATCCTGGGAAGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATCGCCTGCTCCAGATGCGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS TCA 72 bp | GCCCTATGTGGGGTCCAGCCTCATCCCCTGGGTTACTaGGCAAGCCATCCATCCACTTACGCCCTGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALCGVQPHPLGY*ASHPSTYALGP Trigger: AGGACCCAGGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATGAGGCTGGACCCCACATAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS GCA 72 bp | ATTCAGGTCCCCCAGGATTATCACGTGACTGCCAGCTaGCAGGAGCGCTTCTGCTCGCATCTGGAGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: IQVPQDYHVTAS*QERFCSHLEQA Trigger: CGCCTGCTCCAGATGCGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTGATAATCCTGGGGGACCTGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS GCA 72 bp | GTGGGACAGCTGCTGGGTTCCTGGCATGCAAGGCCTTaGAGGGGACTCCGGATCCCATTGATGTTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VGQLLGSWHARP*RGLRIPLMFQL Trigger: AAGCTGGAACATCAATGGGATCCGGAGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGCAGCTGTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | CATGAAGAGCCCTATGTGGGGTCCAGCCTCATCCCCTaGGTTACTGAGCAAGCCATCCATCCACTTACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HEEPYVGSSLIP*VTEQAIHPLTP Trigger: GGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATGAGGCTGGACCCCACATAGGGCTCTTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | CAGGCAGCTACAGGCAACAGACTACTTGCATCGCAGTaGTCAATGGGTCGGTGGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAATGNRLLASQ*SMGRWAVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGTTGCCTGTAGCTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS GCA 72 bp | GATTATCACGTGACTGCCAGCTGCCAGGAGCGCTTCTaGTCGCATCTGGAGCAGGCGATAGAAGCGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: DYHVTASCQERF*SHLEQAIEAHL Trigger: AAGATGCGCTTCTATCGCCTGCTCCAGATGCGAGCAGAAGCGCTCCTGGCAGCTGGCAGTCACGTGATAATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS TCA 72 bp | TTGAAGGTCAGCCGCTCAGGCTTCCCAGGATCCGCGTaGGGGCAGTACACATTGATCAGGGTCAAAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKVSRSGFPGSA*GQYTLIRVKVF Trigger: GAAGACTTTGACCCTGATCAATGTGTACTGCCCTCACGCGGATCCTGGGAAGCCTGAGCGGCTGACCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS CAA 72 bp | TCTCTGTGCCTGGATTTGATGGCTGGGCTGCAGGACTaGCTGTTCCCGCACAGGTTCTTGCTCAAGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLCLDLMAGLQD*LFPHRFLLKRN Trigger: GTTCCTCTTGAGCAAGAACCTGTGCGGGAACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CAA 90 bp | TCCCGCACAGGTTCTTGCTCAAGAGGAACTAGGAAGCGAAGAATCTaGAGCTGGGTACCTGCAAACTCGGGGAGGAAGCGGGTACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRTGSCSRGTRKRRI*SWVPANSGRKRVHR Trigger: TCTGTGTACCCGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCTAGTTCCTCTTGAGCAAGAACCTGTGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CAA 90 bp | AAGAGGGCCCACCAGAGGCAGGGTAGGCAGCTCCACACCAGAAGTTaGGGAAAGGCTGGAGGAAGGCTGGAAGTAACTCATCAGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KRAHQRQGRQLHTRS*GKAGGRLEVTHQVF Trigger: AAAAACCTGATGAGTTACTTCCAGCCTTCCTCCAGCCTTTCCCAAACTTCTGGTGTGGAGCTGCCTACCCTGCCTCTGGTGGGCCCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS TCA 72 bp | AGAGCCATAGTTGAGATGGCGTGCACCACTGACCACTaGCCAGCAGGTGAAAGCCCTCTGCTGTTTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RAIVEMACTTDH*PAGESPLLFWM Trigger: CATCCAAAACAGCAGAGGGCTTTCACCTGCTGGTCAGTGGTCAGTGGTGCACGCCATCTCAACTATGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS TCA 72 bp | ATGAAGGCTTTTCTTGGCTGTCTCTGTGCCTGGATTTaGTGGCTGGGCTGCAGGACTTGCTGTTCCCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: MKAFLGCLCAWI*WLGCRTCCSRT Trigger: TGTGCGGGAACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAGACAGCCAAGAAAAGCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 72 bp | TCCTCTTCAAAGCATTCCAGACTACTTGCATCGCAGTaGTCAATGGGTCGGTGGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSKHSRLLASQ*SMGRWAVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGAATGCTTTGAAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | TGCTCAAGAGGAACTAGGAAGCGAAGAATCTTGAGCTaGGTACCTGCAAACTCGGGGAGGAAGCGGGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: CSRGTRKRRILS*VPANSGRKRVH Trigger: GTGTACCCGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCTAGTTCCTCTTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 72 bp | CTTTTCTTGGCTGTCTCTGTGCCTGGATTTGATGGCTaGGCTGCAGGACTTGCTGTTCCCGCACAGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLAVSVPGFDG*AAGLAVPAQVL Trigger: AAGAACCTGTGCGGGAACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAGACAGCCAAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 72 bp | GGAACCTTACCAGACTACTTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: GTLPDYLHRSGQ*VGGLYSGPPGL Trigger: TAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGTAAGGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112719.2 |
||
| CDS CCA 72 bp | TTTAGAGGGAACCTTACCAGACTACTTGCATCGCAGTaGTCAATGGGTCGGTGGGCTGTATTCAGGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FRGNLTRLLASQ*SMGRWAVFRSP Trigger: GGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGTAAGGTTCCCTCTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112719.2 |
||
| CDS CCA 72 bp | CTACAGGCAACAGACTACTTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: LQATDYLHRSGQ*VGGLYSGPPGL Trigger: TAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGTTGCCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS CCA 72 bp | ACAGGTCCGGCCTCCCATTCAGGAACTAAGTTAGTGTaGCCACAGGCAGCTACAGGCAACAGACTACTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGPASHSGTKLV*PQAATGNRLLA Trigger: TGCAAGTAGTCTGTTGCCTGTAGCTGCCTGTGGCCACACTAACTTAGTTCCTGAATGGGAGGCCGGACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112725.8 ENSMUST00000112727.10 |
||
| CDS CCA 72 bp | TGGGGTAGCACTGTCCTTACAGAAGGTAGCCACACCTaGGGACGGACAAGAGCATTCAGAATAGCCACTACG | + |
|
Preference number: 6 (lower is better) Translates to: WGSTVLTEGSHT*GRTRAFRIATT Trigger: CGTAGTGGCTATTCTGAATGCTCTTGTCCGTCCCCAGGTGTGGCTACCTTCTGTAAGGACAGTGCTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112721.10 |
||
| CDS CAA 72 bp | GGTTCTTGCTCAAGAGGAACTAGGAAGCGAAGAATCTaGAGCTGGGTACCTGCAAACTCGGGGAGGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSCSRGTRKRRI*SWVPANSGRKR Trigger: CCGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCTAGTTCCTCTTGAGCAAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CAA 72 bp | GGGGCCTATGGTTTAGAGGGAACCTTACCAGACTACTaGCATCGCAGTGGTCAATGGGTCGGTGGGCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GAYGLEGTLPDY*HRSGQWVGGLY Trigger: ATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGTAAGGTTCCCTCTAAACCATAGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112719.2 |
||
| CDS CCA 72 bp | CAAAGCATTCCAGACTACTTGCATCGCAGTGGTCAATaGGTCGGTGGGCTGTATTCAGGTCCCCCAGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: QSIPDYLHRSGQ*VGGLYSGPPGL Trigger: TAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGAATGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | TCAGAGCCCATCACTTCAGGGAGTAAGAAGGAGGCCTaGAAGGTATCTATGACCAAGGCCCTATCTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SEPITSGSKKEA*KVSMTKALSPS Trigger: ACTGGGAGATAGGGCCTTGGTCATAGATACCTTCCAGGCCTCCTTCTTACTCCCTGAAGTGATGGGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CAA 90 bp | AACAAAACTGGGGCCTATGGTTTAGAGGGAACCTTACCAGACTACTaGCATCGCAGTGGTCAATGGGTCGGTGGGCTGTATTCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NKTGAYGLEGTLPDY*HRSGQWVGGLYSGP Trigger: GGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGTAAGGTTCCCTCTAAACCATAGGCCCCAGTTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112719.2 |
||
| CDS CAA 90 bp | TGTAAGGAGGGCCCGGCCCTCACTATCCAGAACCCGGAGTTCCTCTaGCGTGAACTCATCCATGTTTCCATAGCAACCAATATCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: CKEGPALTIQNPEFL*RELIHVSIATNISI Trigger: AATGGAGATATTGGTTGCTATGGAAACATGGATGAGTTCACGCAAGAGGAACTCCGGGTTCTGGATAGTGAGGGCCGGGCCCTCCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026303.16 ENSMUST00000112719.2 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000112725.8 ENSMUST00000112727.10 ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | TGGGTTACTGAGCAAGCCATCCATCCACTTACGCCCTaGGTCCTCTTCAAAGCATTCCAGACTACTTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: WVTEQAIHPLTP*VLFKAFQTTCI Trigger: GATGCAAGTAGTCTGGAATGCTTTGAAGAGGACCCAGGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 ENSMUST00000140207.8 |
||
| CDS TCA 72 bp | CTTCAGGGAGTAAGAAGGAGGCCTGGAAGGTATCTATaGCCAAGGCCCTATCTCCCAGTACATAGTCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQGVRRRPGRYL*PRPYLPVHSQV Trigger: GACTTGACTATGTACTGGGAGATAGGGCCTTGGTCATAGATACCTTCCAGGCCTCCTTCTTACTCCCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 72 bp | TGGACTCTGGAACCTTGTTCTTCTCTTCTAGCATTGTaGCTGTTGCCACCTCTTCTGCAGTCTTTGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WTLEPCSSLLAL*LLPPLLQSLGL Trigger: CAACCCCAAAGACTGCAGAAGAGGTGGCAACAGCCACAATGCTAGAAGAGAAGAACAAGGTTCCAGAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CAA 90 bp | CAGAAGGCAGTCCTTTCTCCCTTCTCATCTTTGGACTCTGGAACCTaGTTCTTCTCTTCTAGCATTGTGGCTGTTGCCACCTCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QKAVLSPFSSLDSGT*FFSSSIVAVATSSA Trigger: TGCAGAAGAGGTGGCAACAGCCACAATGCTAGAAGAGAAGAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAGAAAGGACTGCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
||
| CDS CCA 72 bp | TGGATTCTCGAATGCTCACTGGTCACTTTGGTCTCCTaGAGACAGACAATATCAGCATCCAGCTCGTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: WILECSLVTLVS*RQTISASSSSK Trigger: TTTGGACGAGCTGGATGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGACCAGTGAGCATTCGAGAATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | CATCTCCGTAGAGATCTTGGATTCTCGAATGCTCACTaGTCACTTTGGTCTCCTGGAGACAGACAATATCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLRRDLGFSNAH*SLWSPGDRQYQ Trigger: CTGATATTGTCTGTCTCCAGGAGACCAAAGTGACCAGTGAGCATTCGAGAATCCAAGATCTCTACGGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140207.8 |
||
| CDS CCA 72 bp | ACTTCCAGAAGGCAGTCCTTTCTCCCTTCTCATCTTTaGACTCTGGAACCTTGTTCTTCTCTTCTAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: TSRRQSFLPSHL*TLEPCSSLLAL Trigger: CAATGCTAGAAGAGAAGAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAGAAAGGACTGCCTTCTGGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026303.16 ENSMUST00000112720.8 ENSMUST00000112721.10 |
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