RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020135

Ensembl transcript IDs: ENSMUST00000020349.7, ENSMUST00000105359.8, ENSMUST00000138909.8, ENSMUST00000140828.8, ENSMUST00000154212.8

Found 801 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTTGGCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTaGCCTGTAGCAGCTCCAGGCGCCCCACACTGTCACCAAGCCTCC +
Preference number: 1 (lower is better)
Translates to: GLATLGLDPTLHLDP*PVAAPGAPHCHQAS
Trigger: GGAGGCTTGGTGACAGTGTGGGGCGCCTGGAGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 90 bp CTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTGTaGTTGACACACGCAGACCCACGGCCCAGGTCCTTGAAGGCTTGG +
Preference number: 1 (lower is better)
Translates to: LWKDRAESSLCPGSL*LTHADPRPRSLKAW
Trigger: CCAAGCCTTCAAGGACCTGGGCCGTGGGTCTGCGTGTGTCAATCACAGGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 90 bp GGCACAGAGCAGCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTaGACAGGCTCAGTCTACAACCCCAGTTCAGGGTCATCCTGGGAT +
Preference number: 1 (lower is better)
Translates to: GTEQHAGYLGSHSVW*TGSVYNPSSGSSWD
Trigger: ATCCCAGGATGACCCTGAACTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGCTGCTCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 90 bp CCACCCCATTCTCAAAGCCACTTCCCTCATCTCAGAAGAGGGACTTaGGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAGCTCATG +
Preference number: 1 (lower is better)
Translates to: PPHSQSHFPHLRRGT*GQLKGRSLLWGQLM
Trigger: CATGAGCTGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGCTTTGAGAATGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 90 bp GAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCTaGTGCTCTACTCTGAGTCCTCCCCACGGCCCACATGGGGAAACT +
Preference number: 1 (lower is better)
Translates to: EKDGPCMLVPQPRHL*CSTLSPPHGPHGET
Trigger: AGTTTCCCCATGTGGGCCGTGGGGAGGACTCAGAGTAGAGCAGCAGAGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 90 bp TTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCATaGCGAATGCTGGGAGCAGCTTATCTACAGTCCCTCGCCAAGCAC +
Preference number: 1 (lower is better)
Translates to: LCQEGCLPLAISQRP*RMLGAAYLQSLAKH
Trigger: GTGCTTGGCGAGGGACTGTAGATAAGCTGCTCCCAGCATTCGTCATGGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAGCTCAGGGCAGGTCCTaGATGGGCCCACAGCTAGTG +
Preference number: 2 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPAQGRS*MGPQLV
Trigger: CACTAGCTGTGGGCCCATGCAGGACCTGCCCTGAGC...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCACCCTCCCGCTGGGTaGAGCTCAGGGCAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQHPPAG*SSGQVL
Trigger: CAGGACCTGCCCTGAGCTGCACCCAGCGGGAGGGTG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTCCACAGTGCAGGGCTaGGGCAGCCCCAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: LLALCGKTELSPHSVPGPSTVQG*GSPSCQ
Trigger: TTGGCAGCTGGGGCTGCCTCAGCCCTGCACTGTGGA...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCGCTCAGGGCAGGTCCTaGATGGGCCCACAGCTAGTG +
Preference number: 2 (lower is better)
Translates to: ATSLISEEGLEASSRDGPAQGRS*MGPQLV
Trigger: CACTAGCTGTGGGCCCATGCAGGACCTGCCCTGAGC...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACTCCACCTGGATCCCTaGCCTGTAGCAGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGALHLDP*PVAAPG
Trigger: GCCTGGAGCTGCTACAGGGCAGGGATCCAGGTGGAG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAATGCTGGCTGACTCCTaGGCCCCCGCAGAGCCTAGC +
Preference number: 2 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQMLADS*APAEPS
Trigger: GCTAGGCTCTGCGGGGGCCCAGGAGTCAGCCAGCAT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCTGTGAGGCAGCATaGTTGGCTCTCGGCTTCCCG +
Preference number: 2 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQPCEAA*LALGFP
Trigger: CGGGAAGCCGAGAGCCAAGCATGCTGCCTCACAGGG...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 90 bp CCTGTGATTGACACACGCAGACCCACGGCCCAGGTCCTTGAAGGCTaGGCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGC +
Preference number: 2 (lower is better)
Translates to: PVIDTRRPTAQVLEG*ATLGLDPTLHLDPC
Trigger: GCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGCCAAGCCTTCAAGGACCTGGGCCGTGGGTCTGCGTGTGTCAATCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTCCACAGTGCAGGGCTaGGGCAGCCCCAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDSTVQG*GSPSCQ
Trigger: TTGGCAGCTGGGGCTGCCTCAGCCCTGCACTGTGGA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCACGGCCCAGGTCCTTaGAGGCTTGGCTACCTTAGG +
Preference number: 2 (lower is better)
Translates to: LLALCGKTELSPHSVPGPHGPGP*RLGYLR
Trigger: CCTAAGGTAGCCAAGCCTTCAAGGACCTGGGCCGTG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGTGAGGCAGCATGCTTaGCTCTCGGCTTCCCGCCAT +
Preference number: 2 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQVRQHA*LSASRH
Trigger: ATGGCGGGAAGCCGAGAGCCAAGCATGCTGCCTCAC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGTAGGCCAGCAGCCCTaGCTGGCAGGCAAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDVGQQP*LAGKVL
Trigger: CAGGACCTTGCCTGCCAGCCAGGGCTGCTGGCCTAC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 90 bp CCCACCCCATTCTCAAAGCCACTTCCCTCATCTCAGAAGAGGGACTaGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: PTPFSKPLPSSQKRD*RPAQGTVPSLGAAH
Trigger: ATGAGCTGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGCTTTGAGAATGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGCCTGGGCCACAGGGTaGGGAGAGAAAGTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: LLALCGKTELSPHSVPGPAWATG*GEKVPD
Trigger: ATCTGGAACTTTCTCTCCTCACCCTGTGGCCCAGGC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCACGGCCCAGGTCCTTaGAGGCTTGGCTACCTTAGG +
Preference number: 2 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSHGPGP*RLGYLR
Trigger: CCTAAGGTAGCCAAGCCTTCAAGGACCTGGGCCGTG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGATCCTGGGATGCCTCTaGGGTTTGAGAGGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQILGCL*GLRGSP
Trigger: AGGAGACCCTCTCAAACCTCAGAGGCATCCCAGGAT...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCACTCCACCTGGATCCCTaGCCTGTAGCAGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPLHLDP*PVAAPG
Trigger: GCCTGGAGCTGCTACAGGGCAGGGATCCAGGTGGAG...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCAGGGCTGTTTGCCCTTaGCAATCTCTCAGCGGCCAT +
Preference number: 2 (lower is better)
Translates to: ATSLISEEGLEASSRDGPRAVCP*QSLSGH
Trigger: ATGGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGTGAGGCAGCATGCTTaGCTCTCGGCTTCCCGCCAT +
Preference number: 2 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSVRQHA*LSASRH
Trigger: ATGGCGGGAAGCCGAGAGCCAAGCATGCTGCCTCAC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 90 bp GGCCCCTTACCAGGAGCAGCCTGGCATTCCACAGTAGAGATGTTGTaGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCG +
Preference number: 2 (lower is better)
Translates to: GPLPGAAWHSTVEML*ALCGKTELSPHSVP
Trigger: CGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGAATGCCAGGCTGCTCCTGGTAAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 90 bp AGGCCAGCAGCCCTGGCTGGCAGGCAAGGTCCTGGCATTGAGCAGTaGGTGTCTGGAGTTTCTGCTATGACACTGACCCCAACAGTTAGG +
Preference number: 2 (lower is better)
Translates to: RPAALAGRQGPGIEQ*VSGVSAMTLTPTVR
Trigger: CCTAACTGTTGGGGTCAGTGTCATAGCAGAAACTCCAGACACCAACTGCTCAATGCCAGGACCTTGCCTGCCAGCCAGGGCTGCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGCCTGGGCCACAGGGTaGGGAGAGAAAGTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSAWATG*GEKVPD
Trigger: ATCTGGAACTTTCTCTCCTCACCCTGTGGCCCAGGC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGATGCCTCTGAGGTTTaGGAGGGTCTCCTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQDASEV*EGLLEP
Trigger: TGGCTCTAGGAGACCCTCTCAAACCTCAGAGGCATC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGCCAACTTCAGAAAATaGGGCTGTGTGTGCCCTGCG +
Preference number: 2 (lower is better)
Translates to: LLALCGKTELSPHSVPGPANFRK*GCVCPA
Trigger: CGCAGGGCACACACAGCCCCATTTTCTGAAGTTGGC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGCCAACTTCAGAAAATaGGGCTGTGTGTGCCCTGCG +
Preference number: 2 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQANFRK*GCVCPA
Trigger: CGCAGGGCACACACAGCCCCATTTTCTGAAGTTGGC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAAGGGCTGTTTGCCCTTaGCAATCTCTCAGCGGCCAT +
Preference number: 2 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQRAVCP*QSLSGH
Trigger: ATGGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGCAAGGTCCTGGCATTaGGCAGTTGGTGTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSARSWH*AVGVWS
Trigger: ACTCCAGACACCAACTGCTCAATGCCAGGACCTTGC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCACCCTCCCGCTGGGTaGAGCTCAGGGCAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEHPPAG*SSGQVL
Trigger: CAGGACCTGCCCTGAGCTGCACCCAGCGGGAGGGTG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 90 bp ATGGCAGCAGAGGACACACTGACCAGGTATGAGCAAGGGGTGACATaGGCCAGGGACAGCGACAGACACACACACACACACAGTGAGGTA +
Preference number: 2 (lower is better)
Translates to: MAAEDTLTRYEQGVT*ARDSDRHTHTHSEV
Trigger: TACCTCACTGTGTGTGTGTGTGTGTCTGTCGCTGTCCCTGGCCAATGTCACCCCTTGCTCATACCTGGTCAGTGTGTCCTCTGCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR TCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACATTCCAGGCTGTGACTaGGGCACGAGATCTGATCTG +
Preference number: 2 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDIPGCD*GTRSDL
Trigger: CAGATCAGATCTCGTGCCTCAGTCACAGCCTGGAAT...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGGAAACATCAGGCATTaGTTAGACTGTGGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQGNIRH*LDCGLS
Trigger: TGAAAGCCCACAGTCTAAGCAATGCCTGATGTTTCC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTCCCACAGTGTGTGGTaGACAGGCTCAGTCTACAAC +
Preference number: 2 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDSHSVW*TGSVYN
Trigger: GTTGTAGACTGAGCCTGTGCACCACACACTGTGGGA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTCTCCTAGAGCCACTTaGCTCTGTTCTGAAAAGGGC +
Preference number: 2 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSSPRAT*LCSEKG
Trigger: GCCCTTTTCAGAACAGAGCCAAGTGGCTCTAGGAGA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTGGTCAAGCACCCAGTaGTTAGTCTCCGGTAGACCA +
Preference number: 2 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDWSSTQ*LVSGRP
Trigger: TGGTCTACCGGAGACTAACCACTGGGTGCTTGACCA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTCTGGTCCTAACACCTaGATCATAAAACAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDSGPNT*IIKQAG
Trigger: GCCTGCCTGTTTTATGATGCAGGTGTTAGGACCAGA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp CAGGCTCGCACAGACGGGCCCGCCTCACTTCAGGGATaGTGGCTGACTCCTGGGCCCCCGCAGAGCCTAGCC +
Preference number: 3 (lower is better)
Translates to: QARTDGPASLQG*WLTPGPPQSLA
Trigger: GGCTAGGCTCTGCGGGGGCCCAGGAGTCAGCCAGCATCCCTGAAGTGAGGCGGGCCCGTCTGTGCGAGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp GCTCGCACAGACGGGCCCGCCTCACTTCAGGGATGCTaGCTGACTCCTGGGCCCCCGCAGAGCCTAGCCAGC +
Preference number: 3 (lower is better)
Translates to: ARTDGPASLQGC*LTPGPPQSLAS
Trigger: GCTGGCTAGGCTCTGCGGGGGCCCAGGAGTCAGCCAGCATCCCTGAAGTGAGGCGGGCCCGTCTGTGCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp GACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTGTaGTTGACACACGCAGACCCACGGCCCAGGTCCTTG +
Preference number: 3 (lower is better)
Translates to: DRAESSLCPGSL*LTHADPRPRSL
Trigger: CAAGGACCTGGGCCGTGGGTCTGCGTGTGTCAATCACAGGGACCCGGGACAGAGTGAGGACTCAGCTCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp CACACGTGGTGGCCCCTAGTCATCAGCCTGCCCCTGTaGGGCAGCATGCTTGGCTCTCGGCTTCCCGCCATA +
Preference number: 3 (lower is better)
Translates to: HTWWPLVISLPL*GSMLGSRLPAI
Trigger: TATGGCGGGAAGCCGAGAGCCAAGCATGCTGCCTCACAGGGGCAGGCTGATGACTAGGGGCCACCACGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp CAGCCATCGGCAGCCTGGCGGCTAGCAGACCCCTCCTaGTCTGAATCTAAGGGCTCGTCAGCTCTTGCCTAC +
Preference number: 3 (lower is better)
Translates to: QPSAAWRLADPS*SESKGSSALAY
Trigger: GTAGGCAAGAGCTGACGAGCCCTTAGATTCAGAGCAGGAGGGGTCTGCTAGCCGCCAGGCTGCCGATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAGAGGGCTGTTTGCCCTaGGCAATCTCTCAGCGGCCA +
Preference number: 3 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAEGCLP*AISQRP
Trigger: TGGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTC...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp CCAGGCCAACTTCAGAAAATGGGGCTGTGTGTGCCCTaGGGCCAGTCTATAGCCGATTCCCTCGAGCCCACG +
Preference number: 3 (lower is better)
Translates to: PGQLQKMGLCVP*GQSIADSLEPT
Trigger: CGTGGGCTCGAGGGAATCGGCTATAGACTGGCCGCAGGGCACACACAGCCCCATTTTCTGAAGTTGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp GGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCTaGTGCTCTACTCTGAGTCCTCCCCACGGCCCACAT +
Preference number: 3 (lower is better)
Translates to: GPCMLVPQPRHL*CSTLSPPHGPH
Trigger: ATGTGGGCCGTGGGGAGGACTCAGAGTAGAGCAGCAGAGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp GCTTGGCTCTCGGCTTCCCGCCATAAAAGGGACCCATaGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGA +
Preference number: 3 (lower is better)
Translates to: AWLSASRHKRDP*GRGQQCHRPSR
Trigger: TCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGGTCCCTTTTATGGCGGGAAGCCGAGAGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp CCTAGTCATCAGCCTGCCCCTGTGAGGCAGCATGCTTaGCTCTCGGCTTCCCGCCATAAAAGGGACCCATGG +
Preference number: 3 (lower is better)
Translates to: PSHQPAPVRQHA*LSASRHKRDPW
Trigger: CCATGGGTCCCTTTTATGGCGGGAAGCCGAGAGCCAAGCATGCTGCCTCACAGGGGCAGGCTGATGACTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp GAGCAGCATGCTGGCTACCTGGGCTCCCACAGTGTGTaGTGCACAGGCTCAGTCTACAACCCCAGTTCAGGG +
Preference number: 3 (lower is better)
Translates to: EQHAGYLGSHSV*CTGSVYNPSSG
Trigger: CCCTGAACTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp CAGCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTaGACAGGCTCAGTCTACAACCCCAGTTCAGGGTCA +
Preference number: 3 (lower is better)
Translates to: QHAGYLGSHSVW*TGSVYNPSSGS
Trigger: TGACCCTGAACTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGTGTCAAGAGGGCTGTTaGCCCTTGGCAATCTCTCAG +
Preference number: 3 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQCQEGC*PLAISQ
Trigger: CTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACA...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp AGACGGTATGGCAGCAGAGGACACACTGACCAGGTATaGGCAAGGGGTGACATTGGCCAGGGACAGCGACAG +
Preference number: 3 (lower is better)
Translates to: RRYGSRGHTDQV*ARGDIGQGQRQ
Trigger: CTGTCGCTGTCCCTGGCCAATGTCACCCCTTGCTCATACCTGGTCAGTGTGTCCTCTGCTGCCATACCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp TGGGAGGAGGTGGCTGGGAGAAAGATGGCCCTTGCATaGTGGTACCACAGCCCAGACATCTCTGCTGCTCTA +
Preference number: 3 (lower is better)
Translates to: WEEVAGRKMALA*WYHSPDISAAL
Trigger: TAGAGCAGCAGAGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCTCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp GAGGAGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTaGTACCACAGCCCAGACATCTCTGCTGCTCTACTC +
Preference number: 3 (lower is better)
Translates to: EEVAGRKMALAC*YHSPDISAALL
Trigger: GAGTAGAGCAGCAGAGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTGTCAAGAGGGCTGTTaGCCCTTGGCAATCTCTCAG +
Preference number: 3 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAACQEGC*PLAISQ
Trigger: CTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCTAGCCAGCTTGTCCTaGGAATTAGAGTCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LLALCGKTELSPHSVPGPLASLS*ELESLL
Trigger: CAGGAGGGACTCTAATTCCAAGGACAAGCTGGCTAG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGGCAAGGTCCTGGCATaGAGCAGTTGGTGTCTGGAG +
Preference number: 3 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDGKVLA*SSWCLE
Trigger: CTCCAGACACCAACTGCTCAATGCCAGGACCTTGCC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp GAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCATaGCGAATGCTGGGAGCAGCTTATCTACAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: EGCLPLAISQRP*RMLGAAYLQSL
Trigger: GAGGGACTGTAGATAAGCTGCTCCCAGCATTCGTCATGGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp CCCAGTTCAGGGTCATCCTGGGATGCCTCTGAGGTTTaGGAGGGTCTCCTAGAGCCACTTGGCTCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: PSSGSSWDASEV*EGLLEPLGSVL
Trigger: CAGAACAGAGCCAAGTGGCTCTAGGAGACCCTCTCAAACCTCAGAGGCATCCCAGGATGACCCTGAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp CTACAACCCCAGTTCAGGGTCATCCTGGGATGCCTCTaGGGTTTGAGAGGGTCTCCTAGAGCCACTTGGCTC +
Preference number: 3 (lower is better)
Translates to: LQPQFRVILGCL*GLRGSPRATWL
Trigger: GAGCCAAGTGGCTCTAGGAGACCCTCTCAAACCTCAGAGGCATCCCAGGATGACCCTGAACTGGGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp GTTTGCCCTTGGCAATCTCTCAGCGGCCATGACGAATaGTGGGAGCAGCTTATCTACAGTCCCTCGCCAAGC +
Preference number: 3 (lower is better)
Translates to: VCPWQSLSGHDE*WEQLIYSPSPS
Trigger: GCTTGGCGAGGGACTGTAGATAAGCTGCTCCCAGCATTCGTCATGGCCGCTGAGAGATTGCCAAGGGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp TGCCCTTGGCAATCTCTCAGCGGCCATGACGAATGCTaGGAGCAGCTTATCTACAGTCCCTCGCCAAGCACT +
Preference number: 3 (lower is better)
Translates to: CPWQSLSGHDEC*EQLIYSPSPST
Trigger: AGTGCTTGGCGAGGGACTGTAGATAAGCTGCTCCCAGCATTCGTCATGGCCGCTGAGAGATTGCCAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCACAGTAGAGATGTTGTaGGCTCTCTGTGGAAAGACC +
Preference number: 3 (lower is better)
Translates to: ATSLISEEGLEASSRDGPTVEML*ALCGKT
Trigger: GGTCTTTCCACAGAGAGCCAACAACATCTCTACTGT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCCTGGCATTGAGCAGTaGGTGTCTGGAGTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSPGIEQ*VSGVSA
Trigger: AGCAGAAACTCCAGACACCAACTGCTCAATGCCAGG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAAGGAAACATCAGGCATaGCTTAGACTGTGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQRKHQA*LRLWAF
Trigger: GAAAGCCCACAGTCTAAGCAATGCCTGATGTTTCCT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR GCA 72 bp CGGCTGATCCACAGGTTTTATGTCAAGAGGGCTGTTTaGCCTTGGCAATCTCTCAGCGGCCATGACGAATGC +
Preference number: 3 (lower is better)
Translates to: RLIHRFYVKRAV*PWQSLSGHDEC
Trigger: GCATTCGTCATGGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGATCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR TCA 72 bp TGTCACCAAGCCTCCATTGTGATTCCAGGCTGTGACTaGGGCACGAGATCTGATCTGGTCCTAACACCTGCA +
Preference number: 3 (lower is better)
Translates to: CHQASIVIPGCD*GTRSDLVLTPA
Trigger: TGCAGGTGTTAGGACCAGATCAGATCTCGTGCCTCAGTCACAGCCTGGAATCACAATGGAGGCTTGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CCA 72 bp CCCCAGACAAGGAAACATCAGGCATTGCTTAGACTGTaGGCTTTCAAAGCACTGGACGGGTATCATGATAGG +
Preference number: 3 (lower is better)
Translates to: PQTRKHQALLRL*AFKALDGYHDR
Trigger: CCTATCATGATACCCGTCCAGTGCTTTGAAAGCCCACAGTCTAAGCAATGCCTGATGTTTCCTTGTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR-3UTR CAA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGGCAAGGTCCTGGCATaGAGCAGTTGGTGTCTGGAG +
Preference number: 3 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPGKVLA*SSWCLE
Trigger: CTCCAGACACCAACTGCTCAATGCCAGGACCTTGCC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
3UTR TCA 72 bp TACAGATCGATGGAGTGGCTCGCTTTATTAAAGATATaGACAAGAATCAGAAGCCAGGCAGGGTGTCCACTC +
Preference number: 3 (lower is better)
Translates to: YRSMEWLALLKI*TRIRSQAGCPL
Trigger: GAGTGGACACCCTGCCTGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCGCTGTCCCGCGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPLSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTTCAGGCGCGGGACAGCGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCAGGCCCAGGCGGCTaGCACGTGCCCCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPGPGG*HVPQEY
Trigger: GTACTCCTGGGGCACGTGGCAGCCGCCTGGGCCTGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAGCTTCTAGGCCACCCTaGCGGGCAGGTGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPASRPP*RAGGVR
Trigger: CCGCACCCCACCTGCCCGCCAGGGTGGCCTAGAAGC...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCGCACAGGCAGGCGTaGGGGGCTCTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPHRQA*GALRAG
Trigger: ACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACGGGTGACGAGACCCTaGGAGGCAGGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPRVTRP*EAGQWQ
Trigger: CTGCCACTGCCCTGCCTCTCAGGGTCTCGTCACCCG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAACGGTGCTCGGCCAGTaGAGCCAGCGGGCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPTVLGQ*SQRARR
Trigger: ACGCCTTGCCCGCTGGCTGCACTGGCCGAGCACCGT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCTGATCGCGGGGGCTaGGGGCAGACAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPDRGG*GQTGSR
Trigger: TCTGGAACCTGTCTGCCCGCAGCCCCCGCGATCAGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAAAAGACAGCAGGGAGTaGAGGCCGTCCACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPKDSRE*RPSTAG
Trigger: CCCCGCCGTGGACGGCCTGCACTCCCTGCTGTCTTT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAGGGAGTGTGGCAGGCTaGGCTGCCCTGGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPGSVAG*AALDGV
Trigger: GACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCC...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCATGGAGTGGACGAGGTTaGGTAGCATGCCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPWSGRG*VACPRP
Trigger: GGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCA...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAGAGGGTGCGCCCGGCTaGCAGCCTCACGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAEGAPG*QPHASH
Trigger: GTGGGAGGCGTGAGGCTGGCAGCCGGGCGCACCCTC...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAAGCCTCAAAAGAGGGTaGGCCCGGCTGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPSLKRG*ARLPAS
Trigger: TGAGGCTGGCAGCCGGGCGCACCCTCTTTTGAGGCT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAAGCCCGAGCGGCGCATaGCTACACAGCTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPSPSGA*LHSSLE
Trigger: CTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCACCCTGGCGGGCAGGTaGGGTGCGGGCCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPTLAGR*GAGQCL
Trigger: CAGGCACTGGCCCGCACCCCACCTGCCCGCCAGGGT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCATGGCATTGGCCTGGGTaGTGGGCACAGAGACAGCGC +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPWHWPG*WAQRQR
Trigger: GCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCA...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCACTGCGGAGTCACTaGCCATTGTGGCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPLRSH*PLWPLP
Trigger: TGGCAGCGGCCACAATGGCCAGTGACTCCGCAGTGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAATCAGCGAGCGGATGTaGTGGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPISERM*WASNSS
Trigger: GCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCACTGCCCAGCCCGCTaGACGGGTCACTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSHCPAR*TGHWGW
Trigger: CCATCCCCAGTGACCCGTGCAGCGGGCTGGGCAGTG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCAGGCCGAGGCCACCTTaGGGAGCCGGGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPRPRPP*GAGRAW
Trigger: CCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCT...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACCAGGCCCAGGCGGCTaGCACGTGCCCCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAPGPGG*HVPQEY
Trigger: GTACTCCTGGGGCACGTGGCAGCCGCCTGGGCCTGG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCTGTGGGGACCTCTGTaGTGCCAGGGGCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSLWGPL*CQGLPW
Trigger: CCACGGCAGCCCCTGGCAGCACAGAGGTCCCCACAG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCCAGGTCCAGTCGGCTaGGCCGAGTCTGTCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSPGPVG*AESVRA
Trigger: TGCGCGGACAGACTCGGCCCAGCCGACTGGACCTGG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTGCACTCGGGCATCGGTaGCTGCTGTGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSALGHR*LLCPGQ
Trigger: CTGCCCGGGACACAGCAGCCACCGATGCCCGAGTGC...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCCCCCGCTGCGGGGCTaGGATGGACACCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSPPLRG*DGHRKR
Trigger: TCTCTTCCGGTGTCCATCCCAGCCCCGCAGCGGGGG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACACTGGGGATGGAGCTaGCAATGGAGCGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPHWGWS*QWSGSR
Trigger: TCGAGAGCCGCTCCATTGCCAGCTCCATCCCCAGTG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACACTGCAGGCTGAACTaGCTGGTCTCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPHCRLN*LVSGCP
Trigger: TGGGCAGCCTGAGACCAGCCAGTTCAGCCTGCAGTG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTTCCACATCGCTGCCCTaGGGAGCCACAGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSSTSLP*GATGPL
Trigger: CAGCGGCCCTGTGGCTCCCCAGGGCAGCGATGTGGA...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACCCGTGCAGCCCTGCTaGGGGAGCCATGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAPVQPC*GSHACW
Trigger: CCAGCAGGCATGGCTCCCCCAGCAGGGCTGCACGGG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCCGCACAGGCAGGCGTaGGGGGCTCTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPPHRQA*GALRAG
Trigger: ACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACGGGTGACGAGACCCTaGGAGGCAGGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGARVTRP*EAGQWQ
Trigger: CTGCCACTGCCCTGCCTCTCAGGGTCTCGTCACCCG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAACCTGGCGCACCAGCTaGTCATATGAGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPTWRTS*SYEAME
Trigger: CTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCTCGGTGGCATCGTCTaGCCGGGGCTGTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPLGGIV*PGLSGS
Trigger: GCTGCCAGACAGCCCCGGGCAGACGATGCCACCGAG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCACTGGGCTTCCCTCTaGAGTCCGGGCGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQHWASL*SPGGRL
Trigger: GAGCCTGCCGCCCGGACTCCAGAGGGAAGCCCAGTG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCGGGCTCAGCTGTGGTaGCAGCAGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSRAQLW*QQQPGM
Trigger: CATCCCTGGCTGCTGCTGCCACCACAGCTGAGCCCG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAAGCACGGCCCTCCCTTaGCGCCTCCTGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQSTALP*RLLPRV
Trigger: GACCCTGGGCAGGAGGCGCCAAGGGAGGGCCGTGCT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTAGCACGGCCCTCCCTTaGCGCCTCCTGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAASTALP*RLLPRV
Trigger: GACCCTGGGCAGGAGGCGCCAAGGGAGGGCCGTGCT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTGGTTCTCTGCCTGGCTaGGGACAGCATGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSGSLPG*GQHGPW
Trigger: CCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACC...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCACCCACCGCACGCTCTaGGCAGGCAGGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPTHRTL*AGRWPQ
Trigger: CTGAGGCCACCTGCCTGCCCAGAGCGTGCGGTGGGT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTCGTCCCTCCGACGGTaGCCCCCACCACCCACCGCA +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPSSLRR*PPPPTA
Trigger: TGCGGTGGGTGGTGGGGGCCACCGTCGGAGGGACGA...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCCTGGCCAGTGGAGGTaGCACTCGCCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQPGQWR*HSPGWP
Trigger: AGGCCAGCCAGGCGAGTGCCACCTCCACTGGCCAGG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACCTGGCCAGTGGAGGTaGCACTCGCCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAPGQWR*HSPGWP
Trigger: AGGCCAGCCAGGCGAGTGCCACCTCCACTGGCCAGG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTAAGCAGCCTGGGAGGTaGAGGCCGTGGAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSKQPGR*RPWSPQ
Trigger: CTGCGGACTCCACGGCCTCCACCTCCCAGGCTGCTT...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGAGCCACAGGGCCGCTaGCAGGGGCCTGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPEPQGR*QGPVAD
Trigger: ATCCGCCACAGGCCCCTGCCAGCGGCCCTGTGGCTC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCCAGGGCTGGAGCATaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPRAGA*NLRLYR
Trigger: CCTGTACAACCTCAAGTTTCATGCTCCAGCCCTGGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAACGGTGCTCGGCCAGTaGAGCCAGCGGGCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQTVLGQ*SQRARR
Trigger: ACGCCTTGCCCGCTGGCTGCACTGGCCGAGCACCGT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGAAAGACAGCAGGGAGTaGAGGCCGTCCACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQKDSRE*RPSTAG
Trigger: CCCCGCCGTGGACGGCCTGCACTCCCTGCTGTCTTT...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAAAAGCTGTCCTTGGATaGTCCAGAGCCGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPKAVLG*SRAVHW
Trigger: CCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCTTCCAGCAGGCGGATaGTGGCCCGGCTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPLPAGG*WPGSAL
Trigger: GAGAGCTGAGCCGGGCCACCATCCGCCTGCTGGAAG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCTTCCAGCAGGCGGATaGTGGCCCGGCTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQLPAGG*WPGSAL
Trigger: GAGAGCTGAGCCGGGCCACCATCCGCCTGCTGGAAG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTGGGCACGCAGGTGCCTaGGGAGACAGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAGHAGA*GDSHGC
Trigger: GCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCC...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGCACTCGGGCATCGGTaGCTGCTGTGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQALGHR*LLCPGQ
Trigger: CTGCCCGGGACACAGCAGCCACCGATGCCCGAGTGC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGGTTCTCTGCCTGGCTaGGGACAGCATGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQGSLPG*GQHGPW
Trigger: CCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTCGTCCCTCCGACGGTaGCCCCCACCACCCACCGCA +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSSSLRR*PPPPTA
Trigger: TGCGGTGGGTGGTGGGGGCCACCGTCGGAGGGACGA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCATGCCCGCCGAGGTGGTaGTGCAGTGGCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGACPPRW*CSGWWF
Trigger: GAACCACCAGCCACTGCACCACCACCTCGGCGGGCA...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTGGATGCCCGCCGAGGTaGTGGTGCAGTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAGCPPR*WCSGWW
Trigger: CCACCAGCCACTGCACCACCACCTCGGCGGGCATCC...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCTGAGCTTGGAGGGCTaGAGGGTGGAGCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSLSLEG*RVEPAD
Trigger: GTCAGCAGGCTCCACCCTCCAGCCCTCCAAGCTCAG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCCCGGCGAGTGGCATTaGCCTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAPGEWH*PGWWAQ
Trigger: CTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTTTGCTGTTGCCAGGCTaGGGGGTGCCATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSLLLPG*GVPSSG
Trigger: TCCTGAGGATGGCACCCCTCAGCCTGGCAACAGCAA...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAATGGGGGAAGGGCGCTaGGGCAGGAGGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQMGEGR*GRRLGE
Trigger: CTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCAT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCATGGGGGAAGGGCGCTaGGGCAGGAGGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPMGEGR*GRRLGE
Trigger: CTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCAT...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCACGCATCTCCTTGCGTaGCAGGCCCTGATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPTHLLA*QALIRL
Trigger: CAGCCGGATCAGGGCCTGGCACGCAAGGAGATGCGT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCGCACACGCATCTCCTTaGGTGCCAGGCCCTGATCCG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPAHASP*VPGPDP
Trigger: CGGATCAGGGCCTGGCACGCAAGGAGATGCGTGTGC...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCCTGATCGCGGGGGCTaGGGGCAGACAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAPDRGG*GQTGSR
Trigger: TCTGGAACCTGTCTGCCCGCAGCCCCCGCGATCAGG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGGAGACAGCCATGGCTaGGGCCTGATACTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQGDSHG*GLILGG
Trigger: CCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTGGGGTGCGGGCCAGTaGCTGGCCCTGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSWGAGQ*LALKEG
Trigger: CCCTTCCTTCAGGGCCAGGCACTGGCCCGCACCCCA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCTTGGCAGCCACAGCTaGCTCCCCACCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQLGSHS*LPTSLL
Trigger: AAGGAGGCTGGTGGGGAGGCAGCTGTGGCTGCCAAG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTATGCTCGCCACGCCCTaGCCAGCTCGGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSMLATP*PARPHQ
Trigger: CTGGTGAGGCCGAGCTGGGCAGGGCGTGGCGAGCAT...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCCGGTGGCGTCTTGCTaGGGCTCGGTGGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAPVASC*GSVASS
Trigger: AGACGATGCCACCGAGCCGCAGCAAGACGCCACCGG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTGTCTGCAGGCAGTTGTaGTCACGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGTGACCACAACTGCCTGCAGAC...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCACATCACTGCTGGGCTaGCGGGCTCAGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPTSLLG*RAQLWW
Trigger: CCACCACAGCTGAGCCCGCCAGCCCAGCAGTGATGT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCACTGGGGATGGAGCTaGCAATGGAGCGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSHWGWS*QWSGSR
Trigger: TCGAGAGCCGCTCCATTGCCAGCTCCATCCCCAGTG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACAGCGCCTGCTGCTTTaGGCCGGTGAGATCGGGTCT +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAQRLLL*AGEIGS
Trigger: AGACCCGATCTCACCGGCCCAAAGCAGCAGGCGCTG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCGGCGGGCTGGAGGAGTaGCACTCCTGGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAGGLEE*HSWAGG
Trigger: GCCACCCGCCCAGGAGTGCCACTCCTCCAGCCCGCC...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCGTTCTGGGGATGGCCTaGCCAGTGGAGGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPVLGMA*PVEVAL
Trigger: GAGTGCCACCTCCACTGGCCAGGCCATCCCCAGAAC...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGCCAGGTTCTGGGGATaGCCTGGCCAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPARFWG*PGQWRW
Trigger: CCACCTCCACTGGCCAGGCCATCCCCAGAACCTGGC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACCTAGAGCCAGGTTCTaGGGATGGCCTGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAPRARF*GWPGQW
Trigger: CCACTGGCCAGGCCATCCCCAGAACCTGGCTCTAGG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTAAGCAGCCTGGGAGGTaGAGGCCGTGGAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAKQPGR*RPWSPQ
Trigger: CTGCGGACTCCACGGCCTCCACCTCCCAGGCTGCTT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGGGCGAGACCTGGCTTaGCCTGTGGGGACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPGRDLA*PVGTSV
Trigger: CACAGAGGTCCCCACAGGCCAAGCCAGGTCTCGCCC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCTCCAGGAGACTGGCTaGAGAGGAGACCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSLQETG*RGDRGF
Trigger: AAAGCCCCGGTCTCCTCTCCAGCCAGTCTCCTGGAG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCCGCTGTCCCGCGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPPLSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTTCAGGCGCGGGACAGCGG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACTGGCTTCTCCACTGTaGAGCGAACGCTGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQLASPL*SERCPR
Trigger: ACGCGGGCAGCGTTCGCTTCACAGTGGAGAAGCCAG...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCACTCTGGGGCCTGCTaGGTGGTAGCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPHSGAC*VVAPIL
Trigger: CAGGATTGGAGCTACCACTCAGCAGGCCCCAGAGTG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAAAGGGCCCGTGCTGGTaGCTTGGGCACCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPKGPCW*LGHQGP
Trigger: GGGTCCCTGGTGCCCAAGTCACCAGCACGGGCCCTT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCGGATCTGCGCCCGCTaGACCATCTCGTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAARICAR*TISSEV
Trigger: TACCTCCGACGAGATGGTGCAGCGGGCGCAGATCCG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAACGCATCTCCTTGCGTaGCAGGCCCTGATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQTHLLA*QALIRL
Trigger: CAGCCGGATCAGGGCCTGGCACGCAAGGAGATGCGT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGGAGACAGCCATGGCTaGGGCCTGATACTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPGDSHG*GLILGG
Trigger: CCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTGGGGTGCGGGCCAGTaGCTGGCCCTGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDWGAGQ*LALKEG
Trigger: CCCTTCCTTCAGGGCCAGGCACTGGCCCGCACCCCA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAATGCTCGCCACGCCCTaGCCAGCTCGGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLMLATP*PARPHQ
Trigger: CTGGTGAGGCCGAGCTGGGCAGGGCGTGGCGAGCAT...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCTCATGAAGGGCCAGTaGACTGAGGCTGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQLMKGQ*TEAGGA
Trigger: TGCGCCTCCAGCCTCAGTGCACTGGCCCTTCATGAG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCCGGGCGGGCATGGCTaGCCCCAGGCATTCACGCAA +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDPGGHG*PQAFTQ
Trigger: TTGCGTGAATGCCTGGGGGCAGCCATGCCCGCCCGG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTACCTTTGGACTGAGTaGGGGAGGCTGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPYLWTE*GRLGRL
Trigger: CAGCCGGCCCAGCCTCCCGCACTCAGTCCAAAGGTA...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCTGCGTCACTGGTCTTaGGCTGTGGAGTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPLRHWS*AVEFQR
Trigger: CCGCTGGAACTCCACAGCGCAAGACCAGTGACGCAG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACTGCGTCACTGGTCTTaGGCTGTGGAGTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGALRHWS*AVEFQR
Trigger: CCGCTGGAACTCCACAGCGCAAGACCAGTGACGCAG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTGGGGGAGCCATGCCTaGTGGTGGGAAAGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPWGSHA*WWESLL
Trigger: TAGCAGGCTTTCCCACCAGCAGGCATGGCTCCCCCA...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTAGCGAGCGGATGTGCTaGGCCTCGAACTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAASERMC*ASNSSC
Trigger: GCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTAGCCCGAGCGGCGCATaGCTACACAGCTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAASPSGA*LHSSLE
Trigger: CTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGCATGCGTGCATCTTTaGCACCAGGCGCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQACVHL*HQALRG
Trigger: TCCCCGGAGCGCCTGGTGCCAAAGATGCACGCATGC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCAGGGCAAGGTTGAGTaGGTCCCGGGTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSQGKVE*VPGHLV
Trigger: CACAAGATGACCCGGGACCCACTCAACCTTGCCCTG...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACAGCAGCACTACCCATaGCGATCATCTTGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPQQHYP*RSSCVW
Trigger: CCAAACACAAGATGATCGCCATGGGTAGTGCTGCTG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTATGGCGGGCTCAGCTGTaGTGGCAGCAGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLWRAQL*WQQQPG
Trigger: CCCTGGCTGCTGCTGCCACCACAGCTGAGCCCGCCA...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCATGGCGGGCTCAGCTGTaGTGGCAGCAGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPWRAQL*WQQQPG
Trigger: CCCTGGCTGCTGCTGCCACCACAGCTGAGCCCGCCA...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCGCTTCTAGGCCACCCTaGCGGGCAGGTGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAASRPP*RAGGVR
Trigger: CCGCACCCCACCTGCCCGCCAGGGTGGCCTAGAAGC...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCATCAAGGTTCTCTGCCTaGCTGGGGACAGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGASRFSA*LGTAWP
Trigger: GGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGA...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCACGGGTCACTGGGGATaGAGCTGGCAATGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPTGHWG*SWQWSG
Trigger: GCCGCTCCATTGCCAGCTCCATCCCCAGTGACCCGT...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCAGCGCCTGCTGCTTTaGGCCGGTGAGATCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPQRLLL*AGEIGS
Trigger: AGACCCGATCTCACCGGCCCAAAGCAGCAGGCGCTG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCAGGCTGGGCTGCCCTaGATGGAGTCTCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPQAGLP*MESPFC
Trigger: GCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCGCCTAGGCAGGGGCTaGGATGCTGGAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAARLGRG*DAGEVC
Trigger: ACAGACCTCTCCAGCATCCCAGCCCCTGCCTAGGCG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAATGGCATTGGCCTGGGTaGTGGGCACAGAGACAGCGC +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQWHWPG*WAQRQR
Trigger: GCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCA...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCCCGGCGAGTGGCATTaGCCTGGGTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDPGEWH*PGWWAQ
Trigger: CTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGCTGGCAGGGGCCTGTaGCGGATCCCTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPAGRGL*RIPALQ
Trigger: CTGGAGAGCAGGGATCCGCCACAGGCCCCTGCCAGC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp GACACACGCAGACCCACGGCCCAGGTCCTTGAAGGCTaGGCTACCTTAGGTCTGGATCCCACTCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: DTRRPTAQVLEG*ATLGLDPTLHL
Trigger: CAGGTGGAGAGTGGGATCCAGACCTAAGGTAGCCAAGCCTTCAAGGACCTGGGCCGTGGGTCTGCGTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTAGCTCCTGCCTTAAGTaGGTGTTCTCGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSSSCLK*VFSAFR
Trigger: CCTGAAGGCCGAGAACACTCACTTAAGGCAGGAGCT...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTGGCTGGGGGCTTTGGTaGCAGTTTCTGGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAGWGLW*QFLAEW
Trigger: CCACTCAGCCAGAAACTGTCACCAAAGCCCCCAGCC...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCATGGCTGGCCTTTGCATaGATGGGATCCGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAWLAFA*MGSAQV
Trigger: CACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCA...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTGGCTGGCCTTTGCATaGATGGGATCCGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPWLAFA*MGSAQV
Trigger: CACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCA...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACCTCCTGCTCCAGCTTaGCCTGGAGGTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAPPAPA*PGGVSG
Trigger: TCCTGAAACACCTCCAGGGCAAGCTGGAGCAGGAGG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGATGGTCCAGAGCCGTaGACTGGGCTTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPDGPEP*TGLPSG
Trigger: TCCAGAGGGAAGCCCAGTGCACGGCTCTGGACCATC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTGCCTCGAACTCCAGCTaGTGCCGAATCAGATCCATC +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSASNSS*CRIRSI
Trigger: GATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGC...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTATCAGCGAGCGGATGTaGTGGGCCTCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAISERM*WASNSS
Trigger: GCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCTGCTCCTCCTCTACTaGCACAGGCTTCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPLLLLY*HRLHRQ
Trigger: CTGGCGGTGAAGCCTGTGGCAGTAGAGGAGGAGCAG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTACATGGCCAGCAGTGTaGGCGCAGTATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSTWPAV*AQYLPG
Trigger: ACCAGGAAGATACTGCGCGCACACTGCTGGCCATGT...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCGTAGCCTGGCAGATCTaGGGCTCGATTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPVAWQI*GSIGTG
Trigger: TCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTAC...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCCACAATGGCTTCCATaGAGCCTCGGCGGGCACACA +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPPQWLP*SLGGHT
Trigger: TGTGTGCCCGCCGAGGCTGCATGGAAGCCATTGTGG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCCATCAAGGCGGTCATaGTGCCAACCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQPSRRS*CQPPSA
Trigger: TGCTGAGGGAGGTTGGCAGCATGACCGCCTTGATGG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTTGTGATGTGAGGTGCTaGAGCAGTGTCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSCDVRC*SSVCRQ
Trigger: CTGCCTGCAGACACTGCTGCAGCACCTCACATCACA...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCTTGGCAGCCACAGCTaGCTCCCCACCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSLGSHS*LPTSLL
Trigger: AAGGAGGCTGGTGGGGAGGCAGCTGTGGCTGCCAAG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCACTGCCCAGCCCGCTaGACGGGTCACTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPHCPAR*TGHWGW
Trigger: CCATCCCCAGTGACCCGTGCAGCGGGCTGGGCAGTG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCAGGCTGCCCAGGAGGTaGCGGTGGCGTCTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPRLPRR*RWRLAA
Trigger: CGCAGCAAGACGCCACCGGCACCTCCTGGGCAGCCT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCGCCTGGCTGGCCTTTaGATGAATGGGATCCGCACA +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQRLAGL*MNGIRT
Trigger: TGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCTGTGGGGACCTCTGTaGTGCCAGGGGCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAALWGPL*CQGLPW
Trigger: CCACGGCAGCCCCTGGCAGCACAGAGGTCCCCACAG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAGCCACGTCCTCTGTTTaGACCACTGCGTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAATSSV*TTASLV
Trigger: GACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGC...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTGGGGGAGCCATGCCTaGTGGTGGGAAAGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAWGSHA*WWESLL
Trigger: TAGCAGGCTTTCCCACCAGCAGGCATGGCTCCCCCA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTGCTCCAGCTTGCCCTaGAGGTGTTTCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPCSSLP*RCFRTS
Trigger: GGAGGTCCTGAAACACCTCCAGGGCAAGCTGGAGCA...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACTCCGGGCCCAGGGCTaGAGCATGAAACTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGALRAQG*SMKLEV
Trigger: AACCTCAAGTTTCATGCTCCAGCCCTGGGCCCGGAG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGCTCATCCAAGCGCTTaGACAGGCCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPAHPSA*TGPGAE
Trigger: CTCAGCTCCAGGGCCTGTCCAAGCGCTTGGATGAGC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTGCTGCACCCGGTCCTaGGCTTCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPCCTRS*ASNSSL
Trigger: CAAGGAGCTGTTGGAAGCCCAGGACCGGGTGCAGCA...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAAGCTCTCTGGAGAGCTaGACATGGCCAGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGASSLES*TWPAVC
Trigger: GCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCT...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACAAGCTGGGCCACAATaGCTTCCATGCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQQAGPQ*LPCSLG
Trigger: GCCGAGGCTGCATGGAAGCCATTGTGGCCCAGCTTG...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCGGGCACGCAGGTGCCTaGGGAGACAGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPGHAGA*GDSHGC
Trigger: GCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCC...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGCTGCGGGGCTGGGATaGACACCGGAAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLAAGLG*TPEERW
Trigger: CCACCTCTCTTCCGGTGTCCATCCCAGCCCCGCAGC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTGGATGGAGCTGGCAATaGAGCGGCTCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAGWSWQ*SGSRSC
Trigger: GCAGCTTCGAGAGCCGCTCCATTGCCAGCTCCATCC...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAATGTCTGGCAGCTCGCTaGGACTCACTGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQCLAAR*DSLCHC
Trigger: GCAGTGGCACAGTGAGTCCCAGCGAGCTGCCAGACA...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCGGATGCCCGCCGAGGTaGTGGTGCAGTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPGCPPR*WCSGWW
Trigger: CCACCAGCCACTGCACCACCACCTCGGCGGGCATCC...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGGGAGTGTGGCAGGCTaGGCTGCCCTGGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPGSVAG*AALDGV
Trigger: GACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTGGAGGGCTGGAGGGTaGAGCCTGCTGACACCCCGG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAWRAGG*SLLTPR
Trigger: CCGGGGTGTCAGCAGGCTCCACCCTCCAGCCCTCCA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGGGAGGTGGAGGCCGTaGAGTCCGCAGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLGRWRP*SPQRTA
Trigger: AGCTGTCCTCTGCGGACTCCACGGCCTCCACCTCCC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCGCTGGCAGGGGCCTGTaGCGGATCCCTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAAGRGL*RIPALQ
Trigger: CTGGAGAGCAGGGATCCGCCACAGGCCCCTGCCAGC...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTCCACATCGCTGCCCTaGGGAGCCACAGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAASTSLP*GATGPL
Trigger: CAGCGGCCCTGTGGCTCCCCAGGGCAGCGATGTGGA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCACCGCCAGCAGAGCCTaGGGCTCTGTCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPTASRA*GSVCCT
Trigger: GGTGCAGCAGACAGAGCCTCAGGCTCTGCTGGCGGT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTGCACCTTCTTGCTGTTaGTGTCTGCCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSAPSCC*CLPSMT
Trigger: TGTCATGGAGGGCAGACATCAACAGCAAGAAGGTGC...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACTCTGTGCTGTGTGCTaGCAGGTTCCACAGAGCACT +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGALCAVC*QVPQST
Trigger: AGTGCTCTGTGGAACCTGTCAGCACACAGCACAGAG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCGGATCTGCGCCCGCTaGACCATCTCGTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDRICAR*TISSEV
Trigger: TACCTCCGACGAGATGGTGCAGCGGGCGCAGATCCG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGCACACGCATCTCCTTaGGTGCCAGGCCCTGATCCG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLAHASP*VPGPDP
Trigger: CGGATCAGGGCCTGGCACGCAAGGAGATGCGTGTGC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGTAGCCTGGCAGATCTaGGGCTCGATTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQVAWQI*GSIGTG
Trigger: TCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTAC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTGCTGCAGCAGTGTCTaGAGGCAGTTGTGGTCACGG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAACCSSV*RQLWSR
Trigger: CCGTGACCACAACTGCCTGCAGACACTGCTGCAGCA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAAGCGGCTCTCGAAGCTaGCCAGGGAGCTCACGGAAC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPSGSRS*PGSSRN
Trigger: GTTCCGTGAGCTCCCTGGGCAGCTTCGAGAGCCGCT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCTCGGTGGCATCGTCTaGCCGGGGCTGTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHLGGIV*PGLSGS
Trigger: GCTGCCAGACAGCCCCGGGCAGACGATGCCACCGAG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCCGGTGGCGTCTTGCTaGGGCTCGGTGGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAPVASC*GSVASS
Trigger: AGACGATGCCACCGAGCCGCAGCAAGACGCCACCGG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCGCCTGGCTGGCCTTTaGATGAATGGGATCCGCACA +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAARLAGL*MNGIRT
Trigger: TGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCTGCTGGGGGAGCCATaGCTGCTGGTGGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDLLGEP*LLVGKP
Trigger: AGGCTTTCCCACCAGCAGGCATGGCTCCCCCAGCAG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACTGCTGGGGGAGCCATaGCTGCTGGTGGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLLLGEP*LLVGKP
Trigger: AGGCTTTCCCACCAGCAGGCATGGCTCCCCCAGCAG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTGCTCCAGCTTGCCCTaGAGGTGTTTCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAACSSLP*RCFRTS
Trigger: GGAGGTCCTGAAACACCTCCAGGGCAAGCTGGAGCA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTCCAGAGCCGTGCACTaGGCTTCCCTCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDSRAVH*ASLWSP
Trigger: CGGACTCCAGAGGGAAGCCCAGTGCACGGCTCTGGA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACTCCAAAGCTGTCCTTaGATGGTCCAGAGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGALQSCP*MVQSRA
Trigger: TGCACGGCTCTGGACCATCCAAGGACAGCTTTGGAG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACATCCTCAGGATGTGTaGGGACTTCTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAHPQDV*GLLPPA
Trigger: AGCAGGAGGCAGAAGTCCCCACACATCCTGAGGATG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCTGGAGAGCTGGACATaGCCAGCAGTGTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDLESWT*PAVCAQ
Trigger: CTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCGATCTGGAGCAGCAGTaGCAGACAGCCCGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPDLEQQ*QTARAA
Trigger: CGCCGCTCGGGCTGTCTGCCACTGCTGCTCCAGATC...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGCATGCGTGCATCTTTaGCACCAGGCGCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPACVHL*HQALRG
Trigger: TCCCCGGAGCGCCTGGTGCCAAAGATGCACGCATGC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAGGGGCTTCTTTGAAGTaGTCTCTGCCTCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAGASLK*SLPQAD
Trigger: GTCTGCCTGAGGCAGAGACCACTTCAAAGAAGCCCC...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCGGGCTCAGCTGTGGTaGCAGCAGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPRAQLW*QQQPGM
Trigger: CATCCCTGGCTGCTGCTGCCACCACAGCTGAGCCCG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAACATCACTGCTGGGCTaGCGGGCTCAGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPTSLLG*RAQLWW
Trigger: CCACCACAGCTGAGCCCGCCAGCCCAGCAGTGATGT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGACCCTGGCGGGCAGGTaGGGTGCGGGCCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAETLAGR*GAGQCL
Trigger: CAGGCACTGGCCCGCACCCCACCTGCCCGCCAGGGT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACGCTGCACGGGTCACTaGGGATGGAGCTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLRCTGH*GWSWQW
Trigger: CCATTGCCAGCTCCATCCCCAGTGACCCGTGCAGCG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACACCCACCGCACGCTCTaGGCAGGCAGGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHTHRTL*AGRWPQ
Trigger: CTGAGGCCACCTGCCTGCCCAGAGCGTGCGGTGGGT...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCGGCTGGCTTGTCCCTaGAGGGTCCCTGTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSRLACP*RVPVRS
Trigger: AGACCTTACAGGGACCCTCCAGGGACAAGCCAGCCG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTGCCCGCCGAGGTGGTaGTGCAGTGGCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAACPPRW*CSGWWF
Trigger: GAACCACCAGCCACTGCACCACCACCTCGGCGGGCA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCATTCCTCTTCTGCCCTTaGGCTAGGAGAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAFLFCP*ARRAVL
Trigger: CAGGACAGCTCTCCTAGCCCAAGGGCAGAAGAGGAA...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCTTGGCGAGGCGGGCTaGAGGAGTGGCACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHLGEAG*RSGTPG
Trigger: CCCAGGAGTGCCACTCCTCCAGCCCGCCTCGCCAAG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGTTCTGGGGATGGCCTaGCCAGTGGAGGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDVLGMA*PVEVAL
Trigger: GAGTGCCACCTCCACTGGCCAGGCCATCCCCAGAAC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCGGGAGGTGGAGGCCGTaGAGTCCGCAGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAGRWRP*SPQRTA
Trigger: AGCTGTCCTCTGCGGACTCCACGGCCTCCACCTCCC...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCGGGCGAGACCTGGCTTaGCCTGTGGGGACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPGRDLA*PVGTSV
Trigger: CACAGAGGTCCCCACAGGCCAAGCCAGGTCTCGCCC...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGCACTCAGACCCTCATaGGGGAAGGGCGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPALRPS*GKGAEA
Trigger: TGCCTCAGCGCCCTTCCCCCATGAGGGTCTGAGTGC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAAGCTCCTGCCTTAAGTaGGTGTTCTCGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQSSCLK*VFSAFR
Trigger: CCTGAAGGCCGAGAACACTCACTTAAGGCAGGAGCT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCTCTGCTTCTCTAAGTaGCCGAGTGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPLCFSK*PSACTR
Trigger: CCTGGTGCATGCACTCGGTCACTTAGAGAAGCAGAG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTACTGAGGGAACTAGCTaGGGAAGTCAGGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSTEGTS*GSQGIA
Trigger: TGCTATTCCCTGACTTCCTCAGCTAGTTCCCTCAGT...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGGCTGGGGGCTTTGGTaGCAGTTTCTGGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDGWGLW*QFLAEW
Trigger: CCACTCAGCCAGAAACTGTCACCAAAGCCCCCAGCC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTATGTGTGGGGACTTCTaGCTCCTGCTCCTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAMCGDF*LLLLLY
Trigger: GTAGAGGAGGAGCAGGAGGCAGAAGTCCCCACACAT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCACCGCATTGGCGCGCATaGGTGCATCTTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPPHWRA*VHLWHQ
Trigger: CTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGG...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGCTGCCTTGTTCTCTGTaGTGTGTGCTGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQLPCSL*CVLTGS
Trigger: GGAACCTGTCAGCACACAGCACAGAGAACAAGGCAG...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTACCTGGCAGATGGCTaGCTTGTTCTCTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPYLADG*LVLCAV
Trigger: CACAGCACAGAGAACAAGGCAGCCATCTGCCAGGTA...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGCCACTCTCGATGACTaGCAGGGAGTTCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSATLDD*QGVPLA
Trigger: TGCCAAGGGAACTCCCTGGCAGTCATCGAGAGTGGC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTGCTGCAGCAGTGTCTaGAGGCAGTTGTGGTCACGG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSCCSSV*RQLWSR
Trigger: CCGTGACCACAACTGCCTGCAGACACTGCTGCAGCA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTACAGGTTCCAGAGGGTaGCACAGGCATTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAATGSRG*HRHCSR
Trigger: TCGTGAGCAATGCCTGTGGCACCCTCTGGAACCTGT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAAGTGCATGCACCAGGTaGCGAGTGTCCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQSACTR*RVSNSA
Trigger: AGCTGAGTTGGACACTCGGCACCTGGTGCATGCACT...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGAGAGGACAGAGAGCTaGACCTGGAGAGGGACATCG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSERTES*TWRGTS
Trigger: CGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCTC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCAGCGGCTCTCGAAGCTaGCCAGGGAGCTCACGGAAC +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPSGSRS*PGSSRN
Trigger: GTTCCGTGAGCTCCCTGGGCAGCTTCGAGAGCCGCT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGTCAGACTCAGAAGATaGTTCCAGGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQVRLRR*FQAGFG
Trigger: GCCAAAGCCAGCCTGGAAGCATCTTCTGAGTCTGAC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCATTCTGGGTCTTGTGTTaGTTAGCCAGAAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGAFWVLC*LARRAR
Trigger: ACGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAA...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGCCACGTCCTCTGTTTaGACCACTGCGTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSATSSV*TTASLV
Trigger: GACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCCAAAGAAGGCTGAGTaGAGCAGGCTCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSPKKAE*SRLRSP
Trigger: GGGACTCCTGAGCCTGCTGCACTCAGCCTTCTTTGG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTTCAGGGCCTCCACCTaGCGCACCAGCTGCTCATAT +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSFRAST*RTSCSY
Trigger: ATATGAGCAGCTGGTGCGCCAGGTGGAGGCCCTGAA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCTCCAGAGCCGTGCACTaGGCTTCCCTCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPSRAVH*ASLWSP
Trigger: CGGACTCCAGAGGGAAGCCCAGTGCACGGCTCTGGA...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCAAAGCTGTCCTTGGATaGTCCAGAGCCGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPKAVLG*SRAVHW
Trigger: CCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTT...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCAGGAAGCATCTCTCCTaGTCCAGTTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPRKHLS*SSSSSR
Trigger: CCTGCTGGAAGAACTGGACCAGGAGAGATGCTTCCT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGCTCATCCAAGCGCTTaGACAGGCCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDAHPSA*TGPGAE
Trigger: CTCAGCTCCAGGGCCTGTCCAAGCGCTTGGATGAGC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCTGGAGAGCTGGACATaGCCAGCAGTGTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPLESWT*PAVCAQ
Trigger: CTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCATGTGCAGGGCCGCATTaGCGCGCATGCGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPCAGPH*RACVHL
Trigger: AAGATGCACGCATGCGCGCCAATGCGGCCCTGCACA...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAAGATCTGCGGCTCGATTaGGACAGGAGTTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQDLRLD*DRSFCP
Trigger: GGGACAGAAACTCCTGTCCCAATCGAGCCGCAGATC...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGTCTGCAGGCAGTTGTaGTCACGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGTGACCACAACTGCCTGCAGAC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCATAGACATCACTGCTaGGCTGGCGGGCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSHRHHC*AGGLSC
Trigger: ACAGCTGAGCCCGCCAGCCCAGCAGTGATGTCTATG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCAGCCAACGCCAGCTTaGCCTTGGCCTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPQPTPA*PWPWQP
Trigger: TGGCTGCCAAGGCCAAGGCCAAGCTGGCGTTGGCTG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGGACAGCATGGCCCGTaGAAGATAGAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPGQHGP*KIERTE
Trigger: CTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCACGGGTCACTGGGGATaGAGCTGGCAATGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPTGHWG*SWQWSG
Trigger: GCCGCTCCATTGCCAGCTCCATCCCCAGTGACCCGT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCGCTGCACGGGTCACTaGGGATGGAGCTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAARCTGH*GWSWQW
Trigger: CCATTGCCAGCTCCATCCCCAGTGACCCGTGCAGCG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAAGCCCTAGAACCAGCTaGTGCTGGACCATCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPSPRTS*CWTIQA
Trigger: CGCCTGGATGGTCCAGCACCAGCTGGTTCTAGGGCT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGAGGTGGTGGTGCAGTaGCTGGTGGTTCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSEVVVQ*LVVPHQ
Trigger: CTGATGAGGAACCACCAGCCACTGCACCACCACCTC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCACTGGGCTGCCCTGGATaGAGTCTCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPLGCPG*SLLSAC
Trigger: GCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAG...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCTGGGCTGCCCTGGATaGAGTCTCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDLGCPG*SLLSAC
Trigger: GCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACAGGCTGGGCTGCCCTaGATGGAGTCTCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLQAGLP*MESPFC
Trigger: GCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCTTCCAGGCTGGCTTTaGCCGCTGCCTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAALPGWL*PLPDAA
Trigger: GGCTGCATCAGGCAGCGGCCAAAGCCAGCCTGGAAG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTAGGACTCGCTGCCACTaGAGCGAGCTGAAGCCATAC +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSRTRCH*SELKPY
Trigger: GTATGGCTTCAGCTCGCTCCAGTGGCAGCGAGTCCT...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCACGAGTGGCATTGGCCTaGGTGGTGGGCACAGAGACA +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPRVALA*VVGTET
Trigger: TGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCG...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCCACTGCGGAGTCACTaGCCATTGTGGCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAPLRSH*PLWPLP
Trigger: TGGCAGCGGCCACAATGGCCAGTGACTCCGCAGTGG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp TGGCTGACTCCTGGGCCCCCGCAGAGCCTAGCCAGCTaGTCCTTGGAATTAGAGTCCCTCCTGTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: WLTPGPPQSLAS*SLELESLLSVK
Trigger: CTTTACTGACAGGAGGGACTCTAATTCCAAGGACAAGCTGGCTAGGCTCTGCGGGGGCCCAGGAGTCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp ACCCCTCCTGCTCTGAATCTAAGGGCTCGTCAGCTCTaGCCTACCCTGGGCTGGATGTCACACTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TPPALNLRARQL*PTLGWMSHCVL
Trigger: CAGGACACAGTGTGACATCCAGCCCAGGGTAGGCAAGAGCTGACGAGCCCTTAGATTCAGAGCAGGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTTGCTGTTGCCAGGCTaGGGGGTGCCATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAALLLPG*GVPSSG
Trigger: TCCTGAGGATGGCACCCCTCAGCCTGGCAACAGCAA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTAGTGGGCCTTATGTCTaGCCTCAAGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSSGPYV*PQGSGL
Trigger: AAGCCCAGAGCCTTGAGGTCAGACATAAGGCCCACT...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGAAGGGCCCGTGCTGGTaGCTTGGGCACCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEKGPCW*LGHQGP
Trigger: GGGTCCCTGGTGCCCAAGTCACCAGCACGGGCCCTT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGCTCTCCAGGCTAGGTaGCGTGCTAGAGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSALQAR*RARVGL
Trigger: AAGACCAACTCTAGCACGTCACCTAGCCTGGAGAGC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAACCTGGCGCACCAGCTaGTCATATGAGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPTWRTS*SYEAME
Trigger: CTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACCTCCTGCTCCAGCTTaGCCTGGAGGTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLPPAPA*PGGVSG
Trigger: TCCTGAAACACCTCCAGGGCAAGCTGGAGCAGGAGG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCTGCTCCTCCTCTACTaGCACAGGCTTCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPLLLLY*HRLHRQ
Trigger: CTGGCGGTGAAGCCTGTGGCAGTAGAGGAGGAGCAG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCTGCCAGGCTGAGGGGTaGCATCCTCAGGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPCQAEG*HPQDVW
Trigger: CCACACATCCTGAGGATGGCACCCCTCAGCCTGGCA...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCCTCCACCTTGCTGTTaGCAGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPPPPCC*QAEGCH
Trigger: ATGGCACCCCTCAGCCTGGCAACAGCAAGGTGGAGG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCACCAGGAAACCCAGTaGACCATCTACCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPHQETQ*TIYLAD
Trigger: ATCTGCCAGGTAGATGGTGCACTGGGTTTCCTGGTG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGCCACTCTCGATGACTaGCAGGGAGTTCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPATLDD*QGVPLA
Trigger: TGCCAAGGGAACTCCCTGGCAGTCATCGAGAGTGGC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCAGTAGCCATCGCTGGTaGTACCGCTGTTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: ATSLISEEGLEASSRDGPSSHRW*YRCSSY
Trigger: ATAGCTTGAACAGCGGTAGCACCAGCGATGGCTACT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGAGGCTGCCCAGGAGGTaGCGGTGGCGTCTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAERLPRR*RWRLAA
Trigger: CGCAGCAAGACGCCACCGGCACCTCCTGGGCAGCCT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCCGGGCGGGCATGGCTaGCCCCAGGCATTCACGCAA +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEPGGHG*PQAFTQ
Trigger: TTGCGTGAATGCCTGGGGGCAGCCATGCCCGCCCGG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTTCTGGGTCTTGTGTTaGTTAGCCAGAAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAFWVLC*LARRAR
Trigger: ACGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCACTGGGCTTCCCTCTaGAGTCCGGGCGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEHWASL*SPGGRL
Trigger: GAGCCTGCCGCCCGGACTCCAGAGGGAAGCCCAGTG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTCTCCAAAGCTGTCCTTaGATGGTCCAGAGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSLQSCP*MVQSRA
Trigger: TGCACGGCTCTGGACCATCCAAGGACAGCTTTGGAG...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCAGGAAGCATCTCTCCTaGTCCAGTTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPRKHLS*SSSSSR
Trigger: CCTGCTGGAAGAACTGGACCAGGAGAGATGCTTCCT...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACAGCTCTCTGGAGAGCTaGACATGGCCAGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDSSLES*TWPAVC
Trigger: GCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCT...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGGCTACACAGCTCTCTaGAGAGCTGGACATGGCCAG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLGYTAL*RAGHGQ
Trigger: CTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACATAGACATCACTGCTaGGCTGGCGGGCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLHRHHC*AGGLSC
Trigger: ACAGCTGAGCCCGCCAGCCCAGCAGTGATGTCTATG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCAGCCAACGCCAGCTTaGCCTTGGCCTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHQPTPA*PWPWQP
Trigger: TGGCTGCCAAGGCCAAGGCCAAGCTGGCGTTGGCTG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCCAGGTCCAGTCGGCTaGGCCGAGTCTGTCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEPGPVG*AESVRA
Trigger: TGCGCGGACAGACTCGGCCCAGCCGACTGGACCTGG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTGTCTGGCAGCTCGCTaGGACTCACTGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAACLAAR*DSLCHC
Trigger: GCAGTGGCACAGTGAGTCCCAGCGAGCTGCCAGACA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCACTGCAGGCTGAACTaGCTGGTCTCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPHCRLN*LVSGCP
Trigger: TGGGCAGCCTGAGACCAGCCAGTTCAGCCTGCAGTG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGAGGTGGTGGTGCAGTaGCTGGTGGTTCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLEVVVQ*LVVPHQ
Trigger: CTGATGAGGAACCACCAGCCACTGCACCACCACCTC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCGCACAGGTGACTTCTaGGTCTTGTGTTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAARTGDF*VLCCLA
Trigger: GGCTAAGCAACACAAGACCCAGAAGTCACCTGTGCG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAAGGACTCGCTGCCACTaGAGCGAGCTGAAGCCATAC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPRTRCH*SELKPY
Trigger: GTATGGCTTCAGCTCGCTCCAGTGGCAGCGAGTCCT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCGAGTGGCATTGGCCTaGGTGGTGGGCACAGAGACA +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAARVALA*VVGTET
Trigger: TGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACGCACTCAGACCCTCATaGGGGAAGGGCGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHALRPS*GKGAEA
Trigger: TGCCTCAGCGCCCTTCCCCCATGAGGGTCTGAGTGC...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp TTCTCAAAGCCACTTCCCTCATCTCAGAAGAGGGACTaGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FSKPLPSSQKRD*RPAQGTVPSLG
Trigger: CCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGCTTTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp GAGGACACACTGACCAGGTATGAGCAAGGGGTGACATaGGCCAGGGACAGCGACAGACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: EDTLTRYEQGVT*ARDSDRHTHTH
Trigger: GTGTGTGTGTGTGTGTCTGTCGCTGTCCCTGGCCAATGTCACCCCTTGCTCATACCTGGTCAGTGTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACTCTGCTTCTCTAAGTaGCCGAGTGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLLCFSK*PSACTR
Trigger: CCTGGTGCATGCACTCGGTCACTTAGAGAAGCAGAG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCAGCTCCTTGTCAATCTaGTCCAAGCGCGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAASSLSI*SKREAR
Trigger: CCGGGCTTCGCGCTTGGAGCAGATTGACAAGGAGCT...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAATGTGTGGGGACTTCTaGCTCCTGCTCCTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPMCGDF*LLLLLY
Trigger: GTAGAGGAGGAGCAGGAGGCAGAAGTCCCCACACAT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTGCCAGGCTGAGGGGTaGCATCCTCAGGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHCQAEG*HPQDVW
Trigger: CCACACATCCTGAGGATGGCACCCCTCAGCCTGGCA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCCGCATTGGCGCGCATaGGTGCATCTTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHPHWRA*VHLWHQ
Trigger: CTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCCATCAAGGCGGTCATaGTGCCAACCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPPSRRS*CQPPSA
Trigger: TGCTGAGGGAGGTTGGCAGCATGACCGCCTTGATGG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTCGTCTGATGAGGTGTaGAGGGCAGAGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDSSDEV*RAEMSS
Trigger: GGAGGACATCTCTGCCCTGCACACCTCATCAGACGA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCGCTGTCAAGGTTCTCTaGCTGGCTGGGGACAGCATG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAAVKVL*LAGDSM
Trigger: CATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGC...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCGCTGTCAAGGTTCTCTaGCTGGCTGGGGACAGCATG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPAVKVL*LAGDSM
Trigger: CATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGC...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTGTGGCAGGCTGGGCTaGCCTGGATGGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHCGRLG*PGWSLL
Trigger: AAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTTTCTGGGTACCCTTTaGCTTCTCAGGACCGTTAGG +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAFLGTL*LLRTVR
Trigger: CCTAACGGTCCTGAGAAGGCAAAGGGTACCCAGAAA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTTTTCAACTCCTGCAGTaGCTGGTTCCCAAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAFQLLQ*LVPKEG
Trigger: GCCTTCTTTGGGAACCAGGCACTGCAGGAGTTGAAA...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCCAGCAGGCGGATGGTaGCCCGGCTCAGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEPAGGW*PGSALQ
Trigger: TTGGAGAGCTGAGCCGGGCCACCATCCGCCTGCTGG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACACTGCACAGGTAGCCTaGCAGATCTGCGGCTCGATT +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDTAQVA*QICGSI
Trigger: AATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGT...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCAGGGCAAGGTTGAGTaGGTCCCGGGTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAQGKVE*VPGHLV
Trigger: CACAAGATGACCCGGGACCCACTCAACCTTGCCCTG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCACGATCATCTTGTGTTTaGAGTGGACGAGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGARSSCV*SGRGCV
Trigger: TACGCAACCTCGTCCACTCCAAACACAAGATGATCG...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGGACAGCATGGCCCGTaGAAGATAGAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLGQHGP*KIERTE
Trigger: CTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCTGGCTGGGGACAGCATaGCCCGTGGAAGATAGAGAG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPWLGTA*PVEDRE
Trigger: CTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCA...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAAGTTCTCAGATGAGCTaGATGGTGTTGCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGASSQMS*MVLHPP
Trigger: TGGAGGATGCAACACCATCCAGCTCATCTGAGAACT...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACGGATGGAGCTGGCAATaGAGCGGCTCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHGWSWQ*SGSRSC
Trigger: GCAGCTTCGAGAGCCGCTCCATTGCCAGCTCCATCC...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTATTCCTCTTCTGCCCTTaGGCTAGGAGAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLFLFCP*ARRAVL
Trigger: CAGGACAGCTCTCCTAGCCCAAGGGCAGAAGAGGAA...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTCCTCCTGGCATTTCTaGGTTATCTCAGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPSSWHF*VISVGL
Trigger: AAGGCCCACTGAGATAACCCAGAAATGCCAGGAGGA...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGGCCAGGTTCTGGGGATaGCCTGGCCAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEARFWG*PGQWRW
Trigger: CCACCTCCACTGGCCAGGCCATCCCCAGAACCTGGC...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTGTGCTGCGCAGGATGTaGGGGACATCTTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSVLRRM*GTSSSL
Trigger: CAAAGATGAAGATGTCCCCCACATCCTGCGCAGCAC...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp CCAGGAGCAGCCTGGCATTCCACAGTAGAGATGTTGTaGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PGAAWHSTVEML*ALCGKTELSPH
Trigger: GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGAATGCCAGGCTGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCCCAGGGCTGGAGCATaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPPRAGA*NLRLYR
Trigger: CCTGTACAACCTCAAGTTTCATGCTCCAGCCCTGGG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGCACCTTCTTGCTGTTaGTGTCTGCCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLAPSCC*CLPSMT
Trigger: TGTCATGGAGGGCAGACATCAACAGCAAGAAGGTGC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCTGGCTTCTCCACTGTaGAGCGAACGCTGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAELASPL*SERCPR
Trigger: ACGCGGGCAGCGTTCGCTTCACAGTGGAGAAGCCAG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCAGTGGGCCTTATGTCTaGCCTCAAGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPSGPYV*PQGSGL
Trigger: AAGCCCAGAGCCTTGAGGTCAGACATAAGGCCCACT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCTGGGATCCGCACAGGTaGCTTCTGGGTCTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPWDPHR*LLGLVL
Trigger: CAACACAAGACCCAGAAGTCACCTGTGCGGATCCCA...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCGCTCTCCAGGCTAGGTaGCGTGCTAGAGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPALQAR*RARVGL
Trigger: AAGACCAACTCTAGCACGTCACCTAGCCTGGAGAGC...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCACATGGCCAGCAGTGTaGGCGCAGTATCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPTWPAV*AQYLPG
Trigger: ACCAGGAAGATACTGCGCGCACACTGCTGGCCATGT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCACACCAGGAAACCCAGTaGACCATCTACCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPHQETQ*TIYLAD
Trigger: ATCTGCCAGGTAGATGGTGCACTGGGTTTCCTGGTG...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGAGGGTGCGCCCGGCTaGCAGCCTCACGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPEGAPG*QPHASH
Trigger: GTGGGAGGCGTGAGGCTGGCAGCCGGGCGCACCCTC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACGAGAGGACAGAGAGCTaGACCTGGAGAGGGACATCG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHERTES*TWRGTS
Trigger: CGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCTC...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAAGGCCGAGGCCACCTTaGGGAGCCGGGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPRPRPP*GAGRAW
Trigger: CCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCT...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCACAGAAGTTCCTCTTCTaGCCTTGGGCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPQKFLF*PWARRA
Trigger: AGCTCTCCTAGCCCAAGGGCAGAAGAGGAACTTCTG...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACAGAAGTTCCTCTTCTaGCCTTGGGCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLQKFLF*PWARRA
Trigger: AGCTCTCCTAGCCCAAGGGCAGAAGAGGAACTTCTG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGTCAGACTCAGAAGATaGTTCCAGGCTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPVRLRR*FQAGFG
Trigger: GCCAAAGCCAGCCTGGAAGCATCTTCTGAGTCTGAC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTTTCTGGGTACCCTTTaGCTTCTCAGGACCGTTAGG +
Preference number: 4 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSFLGTL*LLRTVR
Trigger: CCTAACGGTCCTGAGAAGGCAAAGGGTACCCAGAAA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCTCCGTGAACGTTGTTaGTCAGGGCTGGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHLRERC*SGLGAL
Trigger: CAAAGCCCCCAGCCCTGAGCAACAACGTTCACGGAG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGAGCGAGCGGATGTGCTaGGCCTCGAACTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAESERMC*ASNSSC
Trigger: GCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCATCCTCAGGATGTGTaGGGACTTCTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPHPQDV*GLLPPA
Trigger: AGCAGGAGGCAGAAGTCCCCACACATCCTGAGGATG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCCGATCATCTTGTGTTTaGAGTGGACGAGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: LLALCGKTELSPHSVPGPRSSCV*SGRGCV
Trigger: TACGCAACCTCGTCCACTCCAAACACAAGATGATCG...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTAGTTCTCAGATGAGCTaGATGGTGTTGCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAASSQMS*MVLHPP
Trigger: TGGAGGATGCAACACCATCCAGCTCATCTGAGAACT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGTCCAGAAATACCTTTaGACTGAGTGCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDVQKYL*TECGRL
Trigger: CAGCCTCCCGCACTCAGTCCAAAGGTATTTCTGGAC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCGCCTAGGCAGGGGCTaGGATGCTGGAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAERLGRG*DAGEVC
Trigger: ACAGACCTCTCCAGCATCCCAGCCCCTGCCTAGGCG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCCTAGAGCCAGGTTCTaGGGATGGCCTGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEPRARF*GWPGQW
Trigger: CCACTGGCCAGGCCATCCCCAGAACCTGGCTCTAGG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCATTGGCCTGGGTGGTaGGCACAGAGACAGCGCTAT +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHHWPGW*AQRQRY
Trigger: ATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAAACTCCTGCAGTGCCTaGTTCCCAAAGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLNSCSA*FPKKAE
Trigger: CTCAGCCTTCTTTGGGAACCAGGCACTGCAGGAGTT...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACT +
Preference number: 4 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQAHMRP*SWSFST
Trigger: AGTTGAAAATGACCAGCTCCATGGCCTCATATGAGC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCTCTGTGCTGTGTGCTaGCAGGTTCCACAGAGCACT +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHLCAVC*QVPQST
Trigger: AGTGCTCTGTGGAACCTGTCAGCACACAGCACAGAG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTGGGATCCGCACAGGTaGCTTCTGGGTCTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHWDPHR*LLGLVL
Trigger: CAACACAAGACCCAGAAGTCACCTGTGCGGATCCCA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCATCTGCTCCAGCACATaGAGCACACGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPICSST*STRISL
Trigger: CAAGGAGATGCGTGTGCTGCATGTGCTGGAGCAGAT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCCTGCCTTGTTCTCTGTaGTGTGTGCTGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAALPCSL*CVLTGS
Trigger: GGAACCTGTCAGCACACAGCACAGAGAACAAGGCAG...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTACCTGGCAGATGGCTaGCTTGTTCTCTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAAYLADG*LVLCAV
Trigger: CACAGCACAGAGAACAAGGCAGCCATCTGCCAGGTA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTGTGATGTGAGGTGCTaGAGCAGTGTCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHCDVRC*SSVCRQ
Trigger: CTGCCTGCAGACACTGCTGCAGCACCTCACATCACA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCGTCTGATGAGGTGTaGAGGGCAGAGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHSSDEV*RAEMSS
Trigger: GGAGGACATCTCTGCCCTGCACACCTCATCAGACGA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGTTTCTCAGGGACTTTaGTCAGGCTGTCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDVSQGL*SGCLQV
Trigger: TACCTGCAGACAGCCTGAGCAAAGTCCCTGAGAAAC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGTTTCTCAGGGACTTTaGTCAGGCTGTCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLVSQGL*SGCLQV
Trigger: TACCTGCAGACAGCCTGAGCAAAGTCCCTGAGAAAC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGTGTGGCAGGCTGGGCTaGCCTGGATGGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAECGRLG*PGWSLL
Trigger: AAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACA...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTAAGCTGATACATCTCTaGAGAAGTTCCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAKLIHL*RSSSSA
Trigger: GGCAGAAGAGGAACTTCTGCAGAGATGTATCAGCTT...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTGTGACAATGGAGTTTaGGCCCTCTTGGATAGCCTG +
Preference number: 4 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDCDNGV*ALLDSL
Trigger: CAGGCTATCCAAGAGGGCGCAAACTCCATTGTCACA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGTGTGCAGGGCCGCATTaGCGCGCATGCGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAECAGPH*RACVHL
Trigger: AAGATGCACGCATGCGCGCCAATGCGGCCCTGCACA...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACACTGCACAGGTAGCCTaGCAGATCTGCGGCTCGATT +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHTAQVA*QICGSI
Trigger: AATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGT...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCCATCTACCTGGCAGATaGCTGCCTTGTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPHLPGR*LPCSLC
Trigger: GCACAGAGAACAAGGCAGCCATCTGCCAGGTAGATG...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTACAGCAGCACTACCCATaGCGATCATCTTGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLQQHYP*RSSCVW
Trigger: CCAAACACAAGATGATCGCCATGGGTAGTGCTGCTG...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGAGCCCTAGAACCAGCTaGTGCTGGACCATCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAESPRTS*CWTIQA
Trigger: CGCCTGGATGGTCCAGCACCAGCTGGTTCTAGGGCT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTATCCTCCTGGCATTTCTaGGTTATCTCAGTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLSSWHF*VISVGL
Trigger: AAGGCCCACTGAGATAACCCAGAAATGCCAGGAGGA...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGAGCCACAGGGCCGCTaGCAGGGGCCTGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPEPQGR*QGPVAD
Trigger: ATCCGCCACAGGCCCCTGCCAGCGGCCCTGTGGCTC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACCCGTGCAGCCCTGCTaGGGGAGCCATGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPPVQPC*GSHACW
Trigger: CCAGCAGGCATGGCTCCCCCAGCAGGGCTGCACGGG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCTCCAGGAGACTGGCTaGAGAGGAGACCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAELQETG*RGDRGF
Trigger: AAAGCCCCGGTCTCCTCTCCAGCCAGTCTCCTGGAG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
3UTR CAA 72 bp TTACCAGGAGCAGCCTGGCATTCCACAGTAGAGATGTaGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LPGAAWHSTVEM*LALCGKTELSP
Trigger: AGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGAATGCCAGGCTGCTCCTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCACTGAGGGAACTAGCTaGGGAAGTCAGGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPTEGTS*GSQGIA
Trigger: TGCTATTCCCTGACTTCCTCAGCTAGTTCCCTCAGT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGGTTCCCAAAGAAGGCTaGGTGCAGCAGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEVPKEG*VQQAQE
Trigger: CTCCTGAGCCTGCTGCACTCAGCCTTCTTTGGGAAC...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGAGCTCCTTGTCAATCTaGTCCAAGCGCGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAESSLSI*SKREAR
Trigger: CCGGGCTTCGCGCTTGGAGCAGATTGACAAGGAGCT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACATCTGCTCCAGCACATaGAGCACACGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHICSST*STRISL
Trigger: CAAGGAGATGCGTGTGCTGCATGTGCTGGAGCAGAT...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCAGTAGCCATCGCTGGTaGTACCGCTGTTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: STGFMSRGLFALGNLSAASSHRW*YRCSSY
Trigger: ATAGCTTGAACAGCGGTAGCACCAGCGATGGCTACT...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGCTCCGTGAACGTTGTTaGTCAGGGCTGGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAELRERC*SGLGAL
Trigger: CAAAGCCCCCAGCCCTGAGCAACAACGTTCACGGAG...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGTTCAGGGCCTCCACCTaGCGCACCAGCTGCTCATAT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEFRAST*RTSCSY
Trigger: ATATGAGCAGCTGGTGCGCCAGGTGGAGGCCCTGAA...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCATCTACCTGGCAGATaGCTGCCTTGTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHHLPGR*LPCSLC
Trigger: GCACAGAGAACAAGGCAGCCATCTGCCAGGTAGATG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACCCCCGCTGCGGGGCTaGGATGGACACCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPPPLRG*DGHRKR
Trigger: TCTCTTCCGGTGTCCATCCCAGCCCCGCAGCGGGGG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCTGGTGCAGTGGCTGGTaGTTCCTCATCAGAGTCATA +
Preference number: 4 (lower is better)
Translates to: PASEKANTPGRVIINQLPWCSGW*FLIRVI
Trigger: TATGACTCTGATGAGGAACCACCAGCCACTGCACCA...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCATGGAGGGCTGGAGGGTaGAGCCTGCTGACACCCCGG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPWRAGG*SLLTPR
Trigger: CCGGGGTGTCAGCAGGCTCCACCCTCCAGCCCTCCA...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACGTGCTGCGCAGGATGTaGGGGACATCTTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHVLRRM*GTSSSL
Trigger: CAAAGATGAAGATGTCCCCCACATCCTGCGCAGCAC...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGGCCTCGAACTCCAGCTaGTGCCGAATCAGATCCATC +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEASNSS*CRIRSI
Trigger: GATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGC...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGAGTGCATGCACCAGGTaGCGAGTGTCCAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAESACTR*RVSNSA
Trigger: AGCTGAGTTGGACACTCGGCACCTGGTGCATGCACT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAAAGCTGATACATCTCTaGAGAAGTTCCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLKLIHL*RSSSSA
Trigger: GGCAGAAGAGGAACTTCTGCAGAGATGTATCAGCTT...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGATCTGGAGCAGCAGTaGCAGACAGCCCGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPDLEQQ*QTARAA
Trigger: CGCCGCTCGGGCTGTCTGCCACTGCTGCTCCAGATC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGCTGCGGGGCTGGGATaGACACCGGAAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPAAGLG*TPEERW
Trigger: CCACCTCTCTTCCGGTGTCCATCCCAGCCCCGCAGC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTGGTGCAGTGGCTGGTaGTTCCTCATCAGAGTCATA +
Preference number: 4 (lower is better)
Translates to: STVEMLLALCGKTELSPHWCSGW*FLIRVI
Trigger: TATGACTCTGATGAGGAACCACCAGCCACTGCACCA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCATGGAGTGGACGAGGTTaGGTAGCATGCCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPWSGRG*VACPRP
Trigger: GGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCA...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACTTCCAGGCTGGCTTTaGCCGCTGCCTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPLPGWL*PLPDAA
Trigger: GGCTGCATCAGGCAGCGGCCAAAGCCAGCCTGGAAG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGGTCCAGAAATACCTTTaGACTGAGTGCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEVQKYL*TECGRL
Trigger: CAGCCTCCCGCACTCAGTCCAAAGGTATTTCTGGAC...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGATACTGGAAACAACCTaGTGCAGCTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEILETT*CSSSLS
Trigger: TGAGAGCGAGGAGCTGCATCAGGTTGTTTCCAGTAT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR TCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACACTCTGGGGCCTGCTaGGTGGTAGCTCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPHSGAC*VVAPIL
Trigger: CAGGATTGGAGCTACCACTCAGCAGGCCCCAGAGTG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACCTCCACCTTGCTGTTaGCAGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPPPPCC*QAEGCH
Trigger: ATGGCACCCCTCAGCCTGGCAACAGCAAGGTGGAGG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACCACAATGGCTTCCATaGAGCCTCGGCGGGCACACA +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPPQWLP*SLGGHT
Trigger: TGTGTGCCCGCCGAGGCTGCATGGAAGCCATTGTGG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACTCATGAAGGGCCAGTaGACTGAGGCTGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPLMKGQ*TEAGGA
Trigger: TGCGCCTCCAGCCTCAGTGCACTGGCCCTTCATGAG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGTGTGACAATGGAGTTTaGGCCCTCTTGGATAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLTNYPSANYRLPQCRAECDNGV*ALLDSL
Trigger: CAGGCTATCCAAGAGGGCGCAAACTCCATTGTCACA...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACGGCTGGCTTGTCCCTaGAGGGTCCCTGTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPRLACP*RVPVRS
Trigger: AGACCTTACAGGGACCCTCCAGGGACAAGCCAGCCG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGGCTACACAGCTCTCTaGAGAGCTGGACATGGCCAG +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPGYTAL*RAGHGQ
Trigger: CTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCACATTGGCCTGGGTGGTaGGCACAGAGACAGCGCTAT +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPHWPGW*AQRQRY
Trigger: ATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATG...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR GCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAACAGGTTCCAGAGGGTaGCACAGGCATTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPTGSRG*HRHCSR
Trigger: TCGTGAGCAATGCCTGTGGCACCCTCTGGAACCTGT...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CCA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAGGGGCTTCTTTGAAGTaGTCTCTGCCTCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPGASLK*SLPQAD
Trigger: GTCTGCCTGAGGCAGAGACCACTTCAAAGAAGCCCC...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS GCA 90 bp CAGGGCTCGCCCGCACAGGCAGGCGTGAGGGGCTCTCAGAGCTGGTaGGTCTGGGCGCACGTGGGGCGAGACCTGGCTTGGCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: QGSPAQAGVRGSQSW*VWAHVGRDLAWPVG
Trigger: CCCCACAGGCCAAGCCAGGTCTCGCCCCACGTGCGCCCAGACGCACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGGGCGAGCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TACTGCGCCCCCGCTGCGGGGCTGGGATGGACACCGGAAGAGAGGTaGACCCGGATGCTCGCCACGCCCTGCCCAGCTCGGCCTCACCAG +
Preference number: 5 (lower is better)
Translates to: YCAPAAGLGWTPEER*TRMLATPCPARPHQ
Trigger: CTGGTGAGGCCGAGCTGGGCAGGGCGTGGCGAGCATCCGGGTCCACCTCTCTTCCGGTGTCCATCCCAGCCCCGCAGCGGGGGCGCAGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GTCCAGGGCTCGCCCGCACAGGCAGGCGTGAGGGGCTCTCAGAGCTaGTGCGTCTGGGCGCACGTGGGGCGAGACCTGGCTTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: VQGSPAQAGVRGSQS*CVWAHVGRDLAWPV
Trigger: CACAGGCCAAGCCAGGTCTCGCCCCACGTGCGCCCAGACGCACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGGGCGAGCCCTGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp CTTGACTGTCTCAGGCCGTCCAGGGCTCGCCCGCACAGGCAGGCGTaGGGGGCTCTCAGAGCTGGTGCGTCTGGGCGCACGTGGGGCGAG +
Preference number: 5 (lower is better)
Translates to: LDCLRPSRARPHRQA*GALRAGASGRTWGE
Trigger: CTCGCCCCACGTGCGCCCAGACGCACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGGGCGAGCCCTGGACGGCCTGAGACAGTCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGACTGGCAATGAGCGGCGGCCAGGCACCAAGGCCGAGGCCACCTTaGGGAGCCGGGCGGGCATGGCTGCCCCCAGGCATTCACGCAAAG +
Preference number: 5 (lower is better)
Translates to: GLAMSGGQAPRPRPP*GAGRAWLPPGIHAK
Trigger: CTTTGCGTGAATGCCTGGGGGCAGCCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTTGGTGCCTGGCCGCCGCTCATTGCCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp AGCCTCGTCCCTCCGACGGTGGCCCCCACCACCCACCGCACGCTCTaGGCAGGCAGGTGGCCTCAGACGCAGCTCCACATCCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SLVPPTVAPTTHRTL*AGRWPQTQLHILLD
Trigger: GTCCAGCAGGATGTGGAGCTGCGTCTGAGGCCACCTGCCTGCCCAGAGCGTGCGGTGGGTGGTGGGGGCCACCGTCGGAGGGACGAGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CAGGGAGTGCAGGCCGTCCACGGCGGGGCGAAGCAGCCTGGGAGGTaGAGGCCGTGGAGTCCGCAGAGGACAGCTCTGATCTGCGACGCC +
Preference number: 5 (lower is better)
Translates to: QGVQAVHGGAKQPGR*RPWSPQRTALICDA
Trigger: GGCGTCGCAGATCAGAGCTGTCCTCTGCGGACTCCACGGCCTCCACCTCCCAGGCTGCTTCGCCCCGCCGTGGACGGCCTGCACTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GCCCGGCTCAGCTCTCCAAAGCTGTCCTTGGATGGTCCAGAGCCGTaGACTGGGCTTCCCTCTGGAGTCCGGGCGGCAGGCTCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: ARLSSPKLSLDGPEP*TGLPSGVRAAGSGP
Trigger: GGGCCCGGAGCCTGCCGCCCGGACTCCAGAGGGAAGCCCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTTGGAGAGCTGAGCCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CCAGGAGGTGCCGGTGGCGTCTTGCTGCGGCTCGGTGGCATCGTCTaGCCGGGGCTGTCTGGCAGCTCGCTGGGACTCACTGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: PGGAGGVLLRLGGIV*PGLSGSSLGLTVPL
Trigger: CAGTGGCACAGTGAGTCCCAGCGAGCTGCCAGACAGCCCCGGGCAGACGATGCCACCGAGCCGCAGCAAGACGCCACCGGCACCTCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CTGCAGGCTGAACTGGCTGGTCTCAGGCTGCCCAGGAGGTGCCGGTaGCGTCTTGCTGCGGCTCGGTGGCATCGTCTGCCCGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LQAELAGLRLPRRCR*RLAAARWHRLPGAV
Trigger: GACAGCCCCGGGCAGACGATGCCACCGAGCCGCAGCAAGACGCCACCGGCACCTCCTGGGCAGCCTGAGACCAGCCAGTTCAGCCTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGGGTCTTGGCGAGGCGGGCTGGAGGAGTGGCACTCCTGGGCGGGTaGCGCAAAGCTGCCAGCTCAGAGATCTTGCCCGGTCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GVLARRAGGVALLGG*RKAASSEILPGRWR
Trigger: CCTCCACCGACCGGGCAAGATCTCTGAGCTGGCAGCTTTGCGCCACCCGCCCAGGAGTGCCACTCCTCCAGCCCGCCTCGCCAAGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TTCGACGCCAGGTCGTACCCGGAGGAGCTACCCTGGGCAGCGGCCTaGCCTCGCCATCACTTCCCCGGCGAGTGGCATTGGCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: FDARSYPEELPWAAA*PRHHFPGEWHWPGW
Trigger: CCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATGGCGAGGCCAGGCCGCTGCCCAGGGTAGCTCCTCCGGGTACGACCTGGCGTCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GCTCCGGGGATCCCTGCGCGCCCCACAGACCCAGCCTCAGTGCCATaGAGGATCTGGAGCAGCAGTGGCAGACAGCCCGAGCGGCGCATG +
Preference number: 5 (lower is better)
Translates to: APGIPARPTDPASVP*RIWSSSGRQPERRM
Trigger: CATGCGCCGCTCGGGCTGTCTGCCACTGCTGCTCCAGATCCTTCATGGCACTGAGGCTGGGTCTGTGGGGCGCGCAGGGATCCCCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp TCCAGTCGGCTGGGCCGAGTCTGTCCGCGCACAGGGTCATCACGGTaGTCGGCCAGTGCAGCCAGCGGGCAAGGCGTCATGTGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: SSRLGRVCPRTGSSR*SASAASGQGVMCSR
Trigger: CCGGGAACACATGACGCCTTGCCCGCTGGCTGCACTGGCCGAGCACCGTGATGACCCTGTGCGCGGACAGACTCGGCCCAGCCGACTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGATGGACACCGGAAGAGAGGTGGACCCGGATGCTCGCCACGCCCTaGCCAGCTCGGCCTCACCAGGACCAGCCTCCTCAAGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GWTPEERWTRMLATP*PARPHQDQPPQAPP
Trigger: TGGAGGGGCTTGAGGAGGCTGGTCCTGGTGAGGCCGAGCTGGGCAGGGCGTGGCGAGCATCCGGGTCCACCTCTCTTCCGGTGTCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GCTCAGCTCTCCAAAGCTGTCCTTGGATGGTCCAGAGCCGTGCACTaGGCTTCCCTCTGGAGTCCGGGCGGCAGGCTCCGGGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AQLSKAVLGWSRAVH*ASLWSPGGRLRAQG
Trigger: GCCCTGGGCCCGGAGCCTGCCGCCCGGACTCCAGAGGGAAGCCCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTTGGAGAGCTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CTCAGTGCCCCGGCATGGAGAGCAGGACTGAGCACGGCCCTCCCTTaGCGCCTCCTGCCCAGGGTCCCCCGAGCTGAGACTGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: LSAPAWRAGLSTALP*RLLPRVPRAETEAV
Trigger: GACAGCTTCAGTCTCAGCTCGGGGGACCCTGGGCAGGAGGCGCCAAGGGAGGGCCGTGCTCAGTCCTGCTCTCCATGCCGGGGCACTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CTACCCTGGGCAGCGGCCTGGCCTCGCCATCACTTCCCCGGCGAGTaGCATTGGCCTGGGTGGTGGGCACAGAGACAGCGCTATCGGACC +
Preference number: 5 (lower is better)
Translates to: LPWAAAWPRHHFPGE*HWPGWWAQRQRYRT
Trigger: GGTCCGATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATGGCGAGGCCAGGCCGCTGCCCAGGGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACTTGAGGACGGGGTCTaGGCGAGGCGGGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPLEDGV*ARRAGG
Trigger: TCCTCCAGCCCGCCTCGCCAAGACCCCGTCCTCAAG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CCGGCTGGGAGAAAACGATGTTGTGCAGGGCCGCATTGGCGCGCATaGGTGCATCTTTGGCACCAGGCGCTCCGGGGATCCCTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: PAGRKRCCAGPHWRA*VHLWHQALRGSLRA
Trigger: GGCGCGCAGGGATCCCCGGAGCGCCTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGGCCCTGCACAACATCGTTTTCTCCCAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGGCCGAGTCTGTCCGCGCACAGGGTCATCACGGTGCTCGGCCAGTaGAGCCAGCGGGCAAGGCGTCATGTGTTCCCGGGTACAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GPSLSAHRVITVLGQ*SQRARRHVFPGTVA
Trigger: GGCTACTGTACCCGGGAACACATGACGCCTTGCCCGCTGGCTGCACTGGCCGAGCACCGTGATGACCCTGTGCGCGGACAGACTCGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CTGTGCCACTGCCCAGCCCGCTGCACGGGTCACTGGGGATGGAGCTaGCAATGGAGCGGCTCTCGAAGCTGCCCAGGGAGCTCACGGAAC +
Preference number: 5 (lower is better)
Translates to: LCHCPARCTGHWGWS*QWSGSRSCPGSSRN
Trigger: GTTCCGTGAGCTCCCTGGGCAGCTTCGAGAGCCGCTCCATTGCCAGCTCCATCCCCAGTGACCCGTGCAGCGGGCTGGGCAGTGGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CCGACGGTGGCCCCCACCACCCACCGCACGCTCTGGGCAGGCAGGTaGCCTCAGACGCAGCTCCACATCCTGCTGGACATACAGCTCATG +
Preference number: 5 (lower is better)
Translates to: PTVAPTTHRTLWAGR*PQTQLHILLDIQLM
Trigger: CATGAGCTGTATGTCCAGCAGGATGTGGAGCTGCGTCTGAGGCCACCTGCCTGCCCAGAGCGTGCGGTGGGTGGTGGGGGCCACCGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TTGAGGACGGGGTCTTGGCGAGGCGGGCTGGAGGAGTGGCACTCCTaGGCGGGTGGCGCAAAGCTGCCAGCTCAGAGATCTTGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: LRTGSWRGGLEEWHS*AGGAKLPAQRSCPV
Trigger: GACCGGGCAAGATCTCTGAGCTGGCAGCTTTGCGCCACCCGCCCAGGAGTGCCACTCCTCCAGCCCGCCTCGCCAAGACCCCGTCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp AGGTTGCGTAGCATGCCCACGGCCCCCAGGTCCCACAACAGTTCCTaGTCGCGGGGGCTGCGGGCAGACAGGTTCCAGAGGGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: RLRSMPTAPRSHNSS*SRGLRADRFQRVPQ
Trigger: CTGTGGCACCCTCTGGAACCTGTCTGCCCGCAGCCCCCGCGATCAGGAACTGTTGTGGGACCTGGGGGCCGTGGGCATGCTACGCAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp AGACTGGGCACGCAGGTGCCTGGGGAGACAGCCATGGCTGCGGCCTaGTACTTGGCGGGTCGGTGGGCTAGCAGGTTCCGCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RLGTQVPGETAMAAA*YLAGRWASRFRRAA
Trigger: TGCTGCTCTGCGGAACCTGCTAGCCCACCGACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GACGCCAGGCACCTCCAGCCTCTGCTGCAGGCTTTCGCCCTTTCCTaGGCTTGGAGGGCTGGAGGGTGGAGCCTGCTGACACCCCGGACA +
Preference number: 5 (lower is better)
Translates to: DARHLQPLLQAFALS*AWRAGGWSLLTPRT
Trigger: TGTCCGGGGTGTCAGCAGGCTCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGCAGAGGCTGGAGGTGCCTGGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GCACGCAGGTGCCTGGGGAGACAGCCATGGCTGCGGCCTGATACTTaGCGGGTCGGTGGGCTAGCAGGTTCCGCAGAGCAGCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: ARRCLGRQPWLRPDT*RVGGLAGSAEQQHY
Trigger: GTAGTGCTGCTGCTCTGCGGAACCTGCTAGCCCACCGACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGCCAGGCACCAAGGCCGAGGCCACCTTGCGGAGCCGGGCGGGCATaGCTGCCCCCAGGCATTCACGCAAAGCCTCCAGTTCTTTATCAG +
Preference number: 5 (lower is better)
Translates to: GQAPRPRPPCGAGRA*LPPGIHAKPPVLYQ
Trigger: CTGATAAAGAACTGGAGGCTTTGCGTGAATGCCTGGGGGCAGCCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTTGGTGCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CCCAGCTCGGCCCCTAGAGCCAGGTTCTGGGGATGGCCTGGCCAGTaGAGGTGGCACTCGCCTGGCTGGCCTTTGCATGAATGGGATCCG +
Preference number: 5 (lower is better)
Translates to: PSSAPRARFWGWPGQ*RWHSPGWPLHEWDP
Trigger: CGGATCCCATTCATGCAAAGGCCAGCCAGGCGAGTGCCACCTCCACTGGCCAGGCCATCCCCAGAACCTGGCTCTAGGGGCCGAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCAAGGCCGAGGCCACCTaGCGGAGCCGGGCGGGCATG +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPKAEAT*RSRAGM
Trigger: CATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GTCACTGGTCTTGCGCTGTGGAGTTCCAGCGGGGCTGTCTTCGGGTaGCGAGACCCTGAGAGGCAGGGCAGTGGCAGGCAGTGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: VTGLALWSSSGAVFG*RDPERQGSGRQCAA
Trigger: CGCAGCACACTGCCTGCCACTGCCCTGCCTCTCAGGGTCTCGTCACCCGAAGACAGCCCCGCTGGAACTCCACAGCGCAAGACCAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp CACTCAGACCCTCATGGGGGAAGGGCGCTGAGGCAGGAGGCTTGGTaGGTACTGGTCCATCCACATCGCTGCCCTGGGGAGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: HSDPHGGRALRQEAW*VLVHPHRCPGEPQG
Trigger: GCCCTGTGGCTCCCCAGGGCAGCGATGTGGATGGACCAGTACTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCATGAGGGTCTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGGTTATCTCAGTGGGCCTTATGTCTGACCTCAAGGCTCTGGGCTTaGGACGCCGTGAGCCAGGCACCTGGGTCCGGCGCCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: GLSQWALCLTSRLWA*DAVSQAPGSGAWAW
Trigger: CCATGCCCAGGCGCCGGACCCAGGTGCCTGGCTCACGGCGTCGCAAGCCCAGAGCCTTGAGGTCAGACATAAGGCCCACTGAGATAACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp AAAGCTGTCCTTGGATGGTCCAGAGCCGTGCACTGGGCTTCCCTCTaGAGTCCGGGCGGCAGGCTCCGGGCCCAGGGCTGGAGCATGAAA +
Preference number: 5 (lower is better)
Translates to: KAVLGWSRAVHWASL*SPGGRLRAQGWSMK
Trigger: TTTCATGCTCCAGCCCTGGGCCCGGAGCCTGCCGCCCGGACTCCAGAGGGAAGCCCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGCCCTGATCCGGCTGGGAGAAAACGATGTTGTGCAGGGCCGCATTaGCGCGCATGCGTGCATCTTTGGCACCAGGCGCTCCGGGGATCC +
Preference number: 5 (lower is better)
Translates to: GPDPAGRKRCCAGPH*RACVHLWHQALRGS
Trigger: GGATCCCCGGAGCGCCTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGGCCCTGCACAACATCGTTTTCTCCCAGCCGGATCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TGCGGACGTAAAGACTGGGCACGCAGGTGCCTGGGGAGACAGCCATaGCTGCGGCCTGATACTTGGCGGGTCGGTGGGCTAGCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: CGRKDWARRCLGRQP*LRPDTWRVGGLAGS
Trigger: GGAACCTGCTAGCCCACCGACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCTTTACGTCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CAGAGCCCTCTGCTTGCGGACGTAAAGACTGGGCACGCAGGTGCCTaGGGAGACAGCCATGGCTGCGGCCTGATACTTGGCGGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: QSPLLADVKTGHAGA*GDSHGCGLILGGSV
Trigger: CACCGACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCTTTACGTCCGCAAGCAGAGGGCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GTGAGGCATAGCGACTGCAGGGCACCATCTCCGCGGGTCCGGGTCTaGCATGAGCTATCCCTGTTGGACCGAGCACTCTGGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VRHSDCRAPSPRVRV*HELSLLDRALWGLL
Trigger: CAGCAGGCCCCAGAGTGCTCGGTCCAACAGGGATAGCTCATGCCAGACCCGGACCCGCGGAGATGGTGCCCTGCAGTCGCTATGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GTGAAGAGCTTGAGGACGGGGTCTTGGCGAGGCGGGCTGGAGGAGTaGCACTCCTGGGCGGGTGGCGCAAAGCTGCCAGCTCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: VKSLRTGSWRGGLEE*HSWAGGAKLPAQRS
Trigger: AGATCTCTGAGCTGGCAGCTTTGCGCCACCCGCCCAGGAGTGCCACTCCTCCAGCCCGCCTCGCCAAGACCCCGTCCTCAAGCTCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCAGCTGTCTTCGGAAGCCTGAGCGATCCGAGGACTCGCTGCCACTaGAGCGAGCTGAAGCCATACGCACCAGGCCCAGGCGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SAVFGSLSDPRTRCH*SELKPYAPGPGGCH
Trigger: GTGGCAGCCGCCTGGGCCTGGTGCGTATGGCTTCAGCTCGCTCCAGTGGCAGCGAGTCCTCGGATCGCTCAGGCTTCCGAAGACAGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAAGTGTCTGCAGGCAGTaGTGGTCACGGAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPSVCRQ*WSRSTC
Trigger: GCAGGTGCTCCGTGACCACAACTGCCTGCAGACACT...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCCCCCGGCGAGTGGCATaGGCCTGGGTGGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPPRRVA*AWVVGT
Trigger: TGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGG...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GTCTGCTGCACCCGGTCCTGGGCTTCCAACAGCTCCTTGTCAATCTaGTCCAAGCGCGAAGCCCGGATCTGCGCCCGCTGCACCATCTCG +
Preference number: 5 (lower is better)
Translates to: VCCTRSWASNSSLSI*SKREARICARCTIS
Trigger: CGAGATGGTGCAGCGGGCGCAGATCCGGGCTTCGCGCTTGGAGCAGATTGACAAGGAGCTGTTGGAAGCCCAGGACCGGGTGCAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CTTCCAGAGCCCTCTGCTTGCGGACGTAAAGACTGGGCACGCAGGTaGCTGGGGAGACAGCCATGGCTGCGGCCTGATACTTGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LPEPSACGRKDWARR*LGRQPWLRPDTWRV
Trigger: GACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCTTTACGTCCGCAAGCAGAGGGCTCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp AGGCACCAAGGCCGAGGCCACCTTGCGGAGCCGGGCGGGCATGGCTaGCCCCAGGCATTCACGCAAAGCCTCCAGTTCTTTATCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RHQGRGHLAEPGGHG*PQAFTQSLQFFISC
Trigger: GCAACTGATAAAGAACTGGAGGCTTTGCGTGAATGCCTGGGGGCAGCCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTTGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CAGGGAGTGTGGCAGGCTGGGCTGCCCTGGATGGAGTCTCCTTTCTaGCTGCCGGTTTCTCGCGCTTTAGAGCCCGTGGGATGGCGGATG +
Preference number: 5 (lower is better)
Translates to: QGVWQAGLPWMESPF*LPVSRALEPVGWRM
Trigger: CATCCGCCATCCCACGGGCTCTAAAGCGCGAGAAACCGGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CTACTCCAGGAGACTGGCTGGAGAGGAGACCGGGGCTTTCTCCACTaGGGAGTCACTGGCCATTGTGGCCGCTGCCATAGGGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LLQETGWRGDRGFLH*GVTGHCGRCHRAGH
Trigger: GTGCCCAGCCCTATGGCAGCGGCCACAATGGCCAGTGACTCCGCAGTGGAGAAAGCCCCGGTCTCCTCTCCAGCCAGTCTCCTGGAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp AGCCCGAGCGGCGCATGGCTACACAGCTCTCTGGAGAGCTGGACATaGCCAGCAGTGTGCGCGCAGTATCTTCCTGGTCGCGCGTTGCCA +
Preference number: 5 (lower is better)
Translates to: SPSGAWLHSSLESWT*PAVCAQYLPGRALP
Trigger: TGGCAACGCGCGACCAGGAAGATACTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCTCCTTTCTGCCTGCCGGTTTCTCGCGCTTTAGAGCCCGTGGGATaGCGGATGCCCGCCGAGGTGGTGGTGCAGTGGCTGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SPFCLPVSRALEPVG*RMPAEVVVQWLVVP
Trigger: AGGAACCACCAGCCACTGCACCACCACCTCGGCGGGCATCCGCCATCCCACGGGCTCTAAAGCGCGAGAAACCGGCAGGCAGAAAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCTGACCTCAAGGCTCTGGGCTTGCGACGCCGTGAGCCAGGCACCTaGGTCCGGCGCCTGGGCATGGCCAAGCTGATACATCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SDLKALGLRRREPGT*VRRLGMAKLIHLCR
Trigger: TCTGCAGAGATGTATCAGCTTGGCCATGCCCAGGCGCCGGACCCAGGTGCCTGGCTCACGGCGTCGCAAGCCCAGAGCCTTGAGGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGGTGCCGGTGGCGTCTaGCTGCGGCTCGGTGGCATC +
Preference number: 5 (lower is better)
Translates to: LLALCGKTELSPHSVPGPGAGGV*LRLGGI
Trigger: GATGCCACCGAGCCGCAGCAAGACGCCACCGGCACC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCCCCGGCGAGTGGCATaGGCCTGGGTGGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAPRRVA*AWVVGT
Trigger: TGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GTTGCCAGGCTGAGGGGTGCCATCCTCAGGATGTGTGGGGACTTCTaGCTCCTGCTCCTCCTCTACTGCCACAGGCTTCACCGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VARLRGAILRMCGDF*LLLLLYCHRLHRQQ
Trigger: CTGCTGGCGGTGAAGCCTGTGGCAGTAGAGGAGGAGCAGGAGGCAGAAGTCCCCACACATCCTGAGGATGGCACCCCTCAGCCTGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GCACCAGGTGCCGAGTGTCCAACTCAGCTTCCAGAGCCCTCTGCTTaGGGACGTAAAGACTGGGCACGCAGGTGCCTGGGGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: APGAECPTQLPEPSA*GRKDWARRCLGRQP
Trigger: TGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCTTTACGTCCGCAAGCAGAGGGCTCTGGAAGCTGAGTTGGACACTCGGCACCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp AGTTGTGCCCCGTTTCTCAGGACGCCAGGCACCTCCAGCCTCTGCTaGAGGCTTTCGCCCTTTCCTGAGCTTGGAGGGCTGGAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SCAPFLRTPGTSSLC*RLSPFPELGGLEGG
Trigger: TCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGCAGAGGCTGGAGGTGCCTGGCGTCCTGAGAAACGGGGCACAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGAAGTTGTGCCCCGTTTCTCAGGACGCCAGGCACCTCCAGCCTCTaGTGCAGGCTTTCGCCCTTTCCTGAGCTTGGAGGGCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GSCAPFLRTPGTSSL*CRLSPFPELGGLEG
Trigger: ACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGCAGAGGCTGGAGGTGCCTGGCGTCCTGAGAAACGGGGCACAACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CAGCAGTGGCAGACAGCCCGAGCGGCGCATGGCTACACAGCTCTCTaGAGAGCTGGACATGGCCAGCAGTGTGCGCGCAGTATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: QQWQTARAAHGYTAL*RAGHGQQCARSIFL
Trigger: CAGGAAGATACTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCTGTCTGCCACTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGGTCTCATCCACGATCAGTCTGGGTTGGGCTCTCACAGGGAGTGTaGCAGGCTGGGCTGCCCTGGATGGAGTCTCCTTTCTGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: GSHPRSVWVGLSQGV*QAGLPWMESPFCLP
Trigger: CGGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCCTGTGAGAGCCCAACCCAGACTGATCGTGGATGAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCACCCATGGCGATCATCTaGTGTTTGGAGTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPPMAII*CLEWTR
Trigger: CCTCGTCCACTCCAAACACAAGATGATCGCCATGGG...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGACAGCCAACGCCAGCTaGGCCTTGGCCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQTANAS*ALALAA
Trigger: GGCTGCCAAGGCCAAGGCCAAGCTGGCGTTGGCTGT...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGCCAGCTCAGAGATCTaGCCCGGTCGGTGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQASSEI*PGRWRL
Trigger: GAGCCTCCACCGACCGGGCAAGATCTCTGAGCTGGC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACTTGAGGACGGGGTCTaGGCGAGGCGGGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQLEDGV*ARRAGG
Trigger: TCCTCCAGCCCGCCTCGCCAAGACCCCGTCCTCAAG...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GTCACGGAGCACCTGCCTGTAGTCCTCCCGTGTGGCAATGAGGCTTaGCACGTTGCGCAGGATCCCACCGCCACTCTCGATGACTGCCAG +
Preference number: 5 (lower is better)
Translates to: VTEHLPVVLPCGNEA*HVAQDPTATLDDCQ
Trigger: CTGGCAGTCATCGAGAGTGGCGGTGGGATCCTGCGCAACGTGTCAAGCCTCATTGCCACACGGGAGGACTACAGGCAGGTGCTCCGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GCCGCTGGCAGGGGCCTGTGGCGGATCCCTGCTCTCCAGGCTAGGTaGCGTGCTAGAGTTGGTCTTAGAAGTGGCCACGTCCTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: AAGRGLWRIPALQAR*RARVGLRSGHVLCL
Trigger: CAAACAGAGGACGTGGCCACTTCTAAGACCAACTCTAGCACGTCACCTAGCCTGGAGAGCAGGGATCCGCCACAGGCCCCTGCCAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CCATGGCGATCATCTTGTGTTTGGAGTGGACGAGGTTGCGTAGCATaGCCACGGCCCCCAGGTCCCACAACAGTTCCTGATCGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: PWRSSCVWSGRGCVA*PRPPGPTTVPDRGG
Trigger: GCCCCCGCGATCAGGAACTGTTGTGGGACCTGGGGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAAACACAAGATGATCGCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGCTGGGGACAGCATGGCCCGTGGAAGATAGAGAGGACAGAGAGCTaGACCTGGAGAGGGACATCGGCCCATCCTGTGCGACCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GWGQHGPWKIERTES*TWRGTSAHPVRPAS
Trigger: AGAAGCTGGTCGCACAGGATGGGCCGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGGGATGGCCTGGCCAGTGGAGGTGGCACTCGCCTGGCTGGCCTTTaGATGAATGGGATCCGCACAGGTGACTTCTGGGTCTTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: GDGLASGGGTRLAGL*MNGIRTGDFWVLCC
Trigger: GCAACACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCGAGTGCCACCTCCACTGGCCAGGCCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TGGGCTTCCCTCTGGAGTCCGGGCGGCAGGCTCCGGGCCCAGGGCTaGAGCATGAAACTTGAGGTTGTACAGGCTACTGATGTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WASLWSPGGRLRAQG*SMKLEVVQATDVSL
Trigger: CAGACTGACATCAGTAGCCTGTACAACCTCAAGTTTCATGCTCCAGCCCTGGGCCCGGAGCCTGCCGCCCGGACTCCAGAGGGAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CATGAAGGATCTGGAGCAGCAGTGGCAGACAGCCCGAGCGGCGCATaGCTACACAGCTCTCTGGAGAGCTGGACATGGCCAGCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: HEGSGAAVADSPSGA*LHSSLESWTWPAVC
Trigger: GCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCTGTCTGCCACTGCTGCTCCAGATCCTTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CAACCTGATGCAGCTCCTCGCTCTCAGAGCCAAGCTGGGCCACAATaGCTTCCATGCAGCCTCGGCGGGCACACAGTGTGGCCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QPDAAPRSQSQAGPQ*LPCSLGGHTVWPCW
Trigger: CCAACAAGGCCACACTGTGTGCCCGCCGAGGCTGCATGGAAGCCATTGTGGCCCAGCTTGGCTCTGAGAGCGAGGAGCTGCATCAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp ATTTCTGGGTTATCTCAGTGGGCCTTATGTCTGACCTCAAGGCTCTaGGCTTGCGACGCCGTGAGCCAGGCACCTGGGTCCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: ISGLSQWALCLTSRL*ACDAVSQAPGSGAW
Trigger: CCAGGCGCCGGACCCAGGTGCCTGGCTCACGGCGTCGCAAGCCCAGAGCCTTGAGGTCAGACATAAGGCCCACTGAGATAACCCAGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGGCCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATGGAGCTaGTCATTTTCAACTCCTGCAGTGCGCAAGGGTCCCCAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GPPPGAPAAHMRPWS*SFSTPAVRKGPQWL
Trigger: GAGCCACTGGGGACCCTTGCGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138909.8
CDS-3UTR CAA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACGGTGCCGGTGGCGTCTaGCTGCGGCTCGGTGGCATC +
Preference number: 5 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDGAGGV*LRLGGI
Trigger: GATGCCACCGAGCCGCAGCAAGACGCCACCGGCACC...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCGCCCTTTCCTGAGCTaGGAGGGCTGGAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAARPFLS*EGWRVE
Trigger: CTCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CCCATGGGGAAGAGGACAGCAGTGTCATCGTCCCTCCCGAGGCCTCCCGCCCCAGGTGACTTCTGGGTCTaGTGTTGCTTAGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PMGKRTAVSSSLPRPPAPGDFWV*CCLARR
Trigger: CCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACC...TGGGGCGGGAGGCCTCGGGAGGGACGATGACACTGCTGTCCTCTTCCCCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp CGGCCCCATCCAGCAGTGGAACATGCTGATAGGTTGGGGATAACTTaGTTGTGCGCACTCGGGCATCGGTGGCTGCTGTGTCCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: RPHPAVEHADRLGIT*LCALGHRWLLCPGQ
Trigger: CTGCCCGGGACACAGCAGCCACCGATGCCCGAGTGCGCACAATCAAGTTATCCCCAACCTATCAGCATGTTCCACTGCTGGATGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp AGCAGCCTGGGAGGTGGAGGCCGTGGAGTCCGCAGAGGACAGCTCTaGTCTGCGACGCCGAAGGAGACCTGGGGATTCCTTGATGAAAGT +
Preference number: 5 (lower is better)
Translates to: SSLGGGGRGVRRGQL*SATPKETWGFLDES
Trigger: ACTTTCATCAAGGAATCCCCAGGTCTCCTTCGGCGTCGCAGATCAGAGCTGTCCTCTGCGGACTCCACGGCCTCCACCTCCCAGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp ATCTCGTCGGAGGTACCGAAGCGCTCCTCCATCAGCGAGCGGATGTaGTGGGCCTCGAACTCCAGCTGCTGCCGAATCAGATCCATCTGC +
Preference number: 5 (lower is better)
Translates to: ISSEVPKRSSISERM*WASNSSCCRIRSIC
Trigger: GCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGTACCTCCGACGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GCAGGAAGCATCTCTCCTGGTCCAGTTCTTCCAGCAGGCGGATGGTaGCCCGGCTCAGCTCTCCAAAGCTGTCCTTGGATGGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: AGSISPGPVLPAGGW*PGSALQSCPWMVQS
Trigger: GCTCTGGACCATCCAAGGACAGCTTTGGAGAGCTGAGCCGGGCCACCATCCGCCTGCTGGAAGAACTGGACCAGGAGAGATGCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCGTCGGAGGTACCGAAGCGCTCCTCCATCAGCGAGCGGATGTGCTaGGCCTCGAACTCCAGCTGCTGCCGAATCAGATCCATCTGCATC +
Preference number: 5 (lower is better)
Translates to: SSEVPKRSSISERMC*ASNSSCCRIRSICI
Trigger: GATGCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGTACCTCCGACGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CAGCTTCATCACTGCACAGGTAGCCTGGCAGATCTGCGGCTCGATTaGGACAGGAGTTTCTGTCCCGCTGTCCCGCGCCTGAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QLHHCTGSLADLRLD*DRSFCPAVPRLKPV
Trigger: GACTGGCTTCAGGCGCGGGACAGCGGGACAGAAACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS CCA 90 bp CGCAGGATCCCACCGCCACTCTCGATGACTGCCAGGGAGTTCCCTTaGCAACGGTATGTGAGGGTGCTCACCAGGAAACCCAGTGCACCA +
Preference number: 5 (lower is better)
Translates to: RRIPPPLSMTAREFP*QRYVRVLTRKPSAP
Trigger: TGGTGCACTGGGTTTCCTGGTGAGCACCCTCACATACCGTTGCCAAGGGAACTCCCTGGCAGTCATCGAGAGTGGCGGTGGGATCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CGCAGAGCAGCAGCACTACCCATGGCGATCATCTTGTGTTTGGAGTaGACGAGGTTGCGTAGCATGCCCACGGCCCCCAGGTCCCACAAC +
Preference number: 5 (lower is better)
Translates to: RRAAALPMAIILCLE*TRLRSMPTAPRSHN
Trigger: GTTGTGGGACCTGGGGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAAACACAAGATGATCGCCATGGGTAGTGCTGCTGCTCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGACAGCATGGCCCGTGGAAGATAGAGAGGACAGAGAGCTGCACCTaGAGAGGGACATCGGCCCATCCTGTGCGACCAGCTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GQHGPWKIERTESCT*RGTSAHPVRPASAA
Trigger: TGCTGCAGAAGCTGGTCGCACAGGATGGGCCGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCCACTGTGAAGCGAACGCTGCCCGCGTCCAGCTCCGAGGGCGGCTaGCATCTTTCTCGACAGTCTGCGATGTCTAGGAAGCGCTTCACA +
Preference number: 5 (lower is better)
Translates to: STVKRTLPASSSEGG*HLSRQSAMSRKRFT
Trigger: TGTGAAGCGCTTCCTAGACATCGCAGACTGTCGAGAAAGATGCCAGCCGCCCTCGGAGCTGGACGCGGGCAGCGTTCGCTTCACAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp AAGGGCCAGTGCACTGAGGCTGGAGGCGCAGGAGAAATTCTCATCTaGCTTCTCCACTGTGAAGCGAACGCTGCCCGCGTCCAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: KGQCTEAGGAGEILI*LLHCEANAARVQLR
Trigger: TCGGAGCTGGACGCGGGCAGCGTTCGCTTCACAGTGGAGAAGCCAGATGAGAATTTCTCCTGCGCCTCCAGCCTCAGTGCACTGGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CTAGGAGAGCTGTCCTGTTTACTACCCTGCTCCGGGCCTCGAGCATaGTTGGCCGGCTGTTCAGGGGCCTCAGGCTCACTGAGGGAACTA +
Preference number: 5 (lower is better)
Translates to: LGELSCLLPCSGPRA*LAGCSGASGSLREL
Trigger: TAGTTCCCTCAGTGAGCCTGAGGCCCCTGAACAGCCGGCCAACCATGCTCGAGGCCCGGAGCAGGGTAGTAAACAGGACAGCTCTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CCTTCAGGGCCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACTCCTGCAGTGCGCAAGGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: PSGPPPGAPAAHMRP*SWSFSTPAVRKGPQ
Trigger: CTGGGGACCCTTGCGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138909.8
CDS-3UTR CAA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTTTTAGGGTCGACTCCTaGGAGGCCCGCAGCACACAT +
Preference number: 5 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSFRVDS*EARSTH
Trigger: ATGTGTGCTGCGGGCCTCCAAGGAGTCGACCCTAAA...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTAGGTCTGTGAAGAGCTaGAGGACGGGGTCTTGGCGA +
Preference number: 5 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSRSVKS*RTGSWR
Trigger: TCGCCAAGACCCCGTCCTCAAGCTCTTCACAGACCT...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTCGCCTGGCTGGCCTTaGCATGAATGGGATCCGCAC +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPSPGWP*HEWDPH
Trigger: GTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCGA...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp TGGCACTCGCCTGGCTGGCCTTTGCATGAATGGGATCCGCACAGGTaGCTTCTGGGTCTTGTGTTGCTTAGCCAGAAGGGCCCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: WHSPGWPLHEWDPHR*LLGLVLLSQKGPCW
Trigger: CCAGCACGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCGAGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp AAAGCCTGCTATGACAGCACTCAGACCCTCATGGGGGAAGGGCGCTaGGGCAGGAGGCTTGGTGAGTACTGGTCCATCCACATCGCTGCC +
Preference number: 5 (lower is better)
Translates to: KACYDSTQTLMGEGR*GRRLGEYWSIHIAA
Trigger: GGCAGCGATGTGGATGGACCAGTACTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCATGAGGGTCTGAGTGCTGTCATAGCAGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp TCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGAACTCCAGCTGCTaGCGAATCAGATCCATCTGCATCGAAAACGTGTCCACGTGCGGC +
Preference number: 5 (lower is better)
Translates to: SSISERMCWASNSSC*RIRSICIENVSTCG
Trigger: GCCGCACGTGGACACGTTTTCGATGCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CGCTCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGAACTCCAGCTaGTGCCGAATCAGATCCATCTGCATCGAAAACGTGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: RSSISERMCWASNSS*CRIRSICIENVSTC
Trigger: GCACGTGGACACGTTTTCGATGCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp TGGGCTGGCGGGCTCAGCTGTGGTGGCAGCAGCAGCCAGGGATGGTaGATCATCATCGTCAAAGCAGCCAGAATCAGAGGCATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: WAGGLSCGGSSSQGW*IIIVKAARIRGIVL
Trigger: CAGGACTATGCCTCTGATTCTGGCTGCTTTGACGATGATGATGCACCATCCCTGGCTGCTGCTGCCACCACAGCTGAGCCCGCCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CCAGGGTCCCCCGAGCTGAGACTGAAGCTGTCGTCTGATGAGGTGTaGAGGGCAGAGATGTCCTCCACCAATCTGTCGATCCGAGCCACA +
Preference number: 5 (lower is better)
Translates to: PGSPELRLKLSSDEV*RAEMSSTNLSIRAT
Trigger: TGTGGCTCGGATCGACAGATTGGTGGAGGACATCTCTGCCCTGCACACCTCATCAGACGACAGCTTCAGTCTCAGCTCGGGGGACCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GGTGCTACCGCTGTTCAAGCTATCATTAGAGAGGCTAGTGTGGGCTaGCTTGAGCCTCAAAAGAGGGTGCGCCCGGCTGCCAGCCTCACG +
Preference number: 5 (lower is better)
Translates to: GATAVQAIIREASVG*LEPQKRVRPAASLT
Trigger: CGTGAGGCTGGCAGCCGGGCGCACCCTCTTTTGAGGCTCAAGGCAGCCCACACTAGCCTCTCTAATGATAGCTTGAACAGCGGTAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp AGAGGACAGAGAGCTGCACCTGGAGAGGGACATCGGCCCATCCTGTaGGACCAGCTTCTGCAGCACCTTGCTAGCTATGGGCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RGQRAAPGEGHRPIL*DQLLQHLASYGQWR
Trigger: TCTCCACTGCCCATAGCTAGCAAGGTGCTGCAGAAGCTGGTCGCACAGGATGGGCCGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp AAGCAGTACACAGCTTCCTCTGTGGGTGTTGTGAGGCATAGCGACTaGAGGGCACCATCTCCGCGGGTCCGGGTCTGGCATGAGCTATCC +
Preference number: 5 (lower is better)
Translates to: KQYTASSVGVVRHSD*RAPSPRVRVWHELS
Trigger: GGATAGCTCATGCCAGACCCGGACCCGCGGAGATGGTGCCCTGCAGTCGCTATGCCTCACAACACCCACAGAGGAAGCTGTGTACTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCAGCAGGAAGCATCTCTCCTGGTCCAGTTCTTCCAGCAGGCGGATaGTGGCCCGGCTCAGCTCTCCAAAGCTGTCCTTGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SAGSISPGPVLPAGG*WPGSALQSCPWMVQ
Trigger: CTGGACCATCCAAGGACAGCTTTGGAGAGCTGAGCCGGGCCACCATCCGCCTGCTGGAAGAACTGGACCAGGAGAGATGCTTCCTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CGGGTCGGTGGGCTAGCAGGTTCCGCAGAGCAGCAGCACTACCCATaGCGATCATCTTGTGTTTGGAGTGGACGAGGTTGCGTAGCATGC +
Preference number: 5 (lower is better)
Translates to: RVGGLAGSAEQQHYP*RSSCVWSGRGCVAC
Trigger: GCATGCTACGCAACCTCGTCCACTCCAAACACAAGATGATCGCCATGGGTAGTGCTGCTGCTCTGCGGAACCTGCTAGCCCACCGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CCGTGGGATGGCGGATGCCCGCCGAGGTGGTGGTGCAGTGGCTGGTaGTTCCTCATCAGAGTCATAGAAGCAGTACACAGCTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PWDGGCPPRWWCSGW*FLIRVIEAVHSFLC
Trigger: ACAGAGGAAGCTGTGTACTGCTTCTATGACTCTGATGAGGAACCACCAGCCACTGCACCACCACCTCGGCGGGCATCCGCCATCCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTCTCCAAAGGTGAGGTaGGTGAGGGTCATGCCAGCG +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPSPKVR*VRVMPA
Trigger: CGCTGGCATGACCCTCACCAACCTCACCTTTGGAGA...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp AGGTGGCTGGGAGAAAGATGGCCCTTGCATGCTGGTACCACAGCCCAGACATCTTTGGAGTGGACGAGGTaGCGTAGCATGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RWLGERWPLHAGTTAQTSLEWTR*RSMPTA
Trigger: GGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAA...AGATGTCTGGGCTGTGGTACCAGCATGCAAGGGCCATCTTTCTCCCAGCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCGTGGCAGGGGCTTCTTaGAAGTGGTCTCTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPVAGAS*KWSLPQ
Trigger: CTGAGGCAGAGACCACTTCAAAGAAGCCCCTGCCAC...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGCCAGCTCAGAGATCTaGCCCGGTCGGTGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLASSEI*PGRWRL
Trigger: GAGCCTCCACCGACCGGGCAAGATCTCTGAGCTGGC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTGCTGAGGCAGGAGGCTaGGTGAGTACTGGTCCATCC +
Preference number: 5 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAAEAGG*VSTGPS
Trigger: GGATGGACCAGTACTCACCAAGCCTCCTGCCTCAGC...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGAGATCTGCGGCTCGATaGGGACAGGAGTGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQRSAAR*GQECLL
Trigger: CAGGAGACACTCCTGTCCCAATCGAGCCGCAGATCT...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS TCA 90 bp GGTGGCCTCAGACGCAGCTCCACATCCTGCTGGACATACAGCTCATaGAGGGCCAGTGCACTGAGGCTGGAGGCGCAGGAGAAATTCTCA +
Preference number: 5 (lower is better)
Translates to: GGLRRSSTSCWTYSS*RASALRLEAQEKFS
Trigger: TGAGAATTTCTCCTGCGCCTCCAGCCTCAGTGCACTGGCCCTTCATGAGCTGTATGTCCAGCAGGATGTGGAGCTGCGTCTGAGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp CTTTCGCCCTTTCCTGAGCTTGGAGGGCTGGAGGGTGGAGCCTGCTaGCACCCCGGACACCAAAGACAAGAGGGAGTCAGACTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LSPFPELGGLEGGAC*HPGHQRQEGVRLRR
Trigger: TCTTCTGAGTCTGACTCCCTCTTGTCTTTGGTGTCCGGGGTGTCAGCAGGCTCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CTGTCTGCCCGGAAGACACGAGCACTCTCGCCTCCTGCTCCAGCTTaGCCTGGAGGTGTTTCAGGACCTCCTTCATTCCAGAAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LSARKTRALSPPAPA*PGGVSGPPSFQKSL
Trigger: CAGAGACTTCTGGAATGAAGGAGGTCCTGAAACACCTCCAGGGCAAGCTGGAGCAGGAGGCGAGAGTGCTCGTGTCTTCCGGGCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
ENSMUST00000138909.8
ENSMUST00000140828.8
ENSMUST00000154212.8
CDS GCA 90 bp TCGTCAAATGACAGCTTCATCACTGCACAGGTAGCCTGGCAGATCTaGGGCTCGATTGGGACAGGAGTTTCTGTCCCGCTGTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: SSNDSFITAQVAWQI*GSIGTGVSVPLSRA
Trigger: GGCGCGGGACAGCGGGACAGAAACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTCATTTGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS GCA 90 bp GGTGACGTGCTAGAGTTGGTCTTAGAAGTGGCCACGTCCTCTGTTTaGACCACTGCGTCACTGGTCTTGCGCTGTGGAGTTCCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: GDVLELVLEVATSSV*TTASLVLRCGVPAG
Trigger: CCCCGCTGGAACTCCACAGCGCAAGACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGCCACTTCTAAGACCAACTCTAGCACGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp AATCGCTGTCAAGGTTCTCTGCCTGGCTGGGGACAGCATGGCCCGTaGAAGATAGAGAGGACAGAGAGCTGCACCTGGAGAGGGACATCG +
Preference number: 5 (lower is better)
Translates to: NRCQGSLPGWGQHGP*KIERTESCTWRGTS
Trigger: CGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp AGGGATGAATCGCTGTCAAGGTTCTCTGCCTGGCTGGGGACAGCATaGCCCGTGGAAGATAGAGAGGACAGAGAGCTGCACCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RDESLSRFSAWLGTA*PVEDREDRELHLER
Trigger: CCTCTCCAGGTGCAGCTCTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGCGATTCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCCTCAAGCCCCTCCAGGGATGAATCGCTGTCAAGGTTCTCTGCCTaGCTGGGGACAGCATGGCCCGTGGAAGATAGAGAGGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSSPSRDESLSRFSA*LGTAWPVEDREDRE
Trigger: CTCTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGCGATTCATCCCTGGAGGGGCTTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CGCCTGGCTGGCCTTTGCATGAATGGGATCCGCACAGGTGACTTCTaGGTCTTGTGTTGCTTAGCCAGAAGGGCCCGTGCTGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: RLAGLCMNGIRTGDF*VLCCLARRARAGDL
Trigger: CAAGTCACCAGCACGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp GGGCCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATGGAGCTaGTCATTTTCAACTCCTGCAGTGCCTGGTTCCCAAAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GPPPGAPAAHMRPWS*SFSTPAVPGSQRRL
Trigger: CAGCCTTCTTTGGGAACCAGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 90 bp CAGCTTCATCACTGCACAGGTAGCCTGGCAGATCTGCGGCTCGATTaGGACAGGAGTGTCTCCTGTACCACTTTCTGTCCCGCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: QLHHCTGSLADLRLD*DRSVSCTTFCPAVP
Trigger: CGGGACAGCGGGACAGAAAGTGGTACAGGAGACACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 90 bp CCTTCAGGGCCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACTCCTGCAGTGCCACAATCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PSGPPPGAPAAHMRP*SWSFSTPAVPQSSQ
Trigger: CTGGGAGGATTGTGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140828.8
CDS-3UTR CAA 90 bp GCATGCTGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAATCTCCAAAGCTGTCCTaGGATGGTCCAGAGCCGTGC +
Preference number: 5 (lower is better)
Translates to: ACWLPGLPQCVVHRLSLQSPKLS*DGPEPC
Trigger: GCACGGCTCTGGACCATCCAAGGACAGCTTTGGAGA...TTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCAGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACTTGTGCAGGGCCGCATaGGCGCGCATGCGTGCATCT +
Preference number: 5 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDLCRAA*ARMRAS
Trigger: AGATGCACGCATGCGCGCCAATGCGGCCCTGCACAA...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCAGATCTGCGGCTCGATaGGGACAGGAGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPRSAAR*GQEFLS
Trigger: GGACAGAAACTCCTGTCCCAATCGAGCCGCAGATCT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS-3UTR CAA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACCGGCGCAGGGCAAGGTaGAGTGGGTCCCGGGTCATC +
Preference number: 5 (lower is better)
Translates to: STVEMLLALCGKTELSPHRRRAR*SGSRVI
Trigger: GATGACCCGGGACCCACTCAACCTTGCCCTGCGCCG...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CTCGCCAAGCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTAGCACCTTCTTGCTGTaGATGTCTGCCCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: LAKHSSARLGEGKHPWQSSTFLL*MSALHD
Trigger: GTCATGGAGGGCAGACATCAACAGCAAGAAGGTGCT...ACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGCTTGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGTCCCTCAGCACCTTCTaGCTGTTGATGTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQSLSTF*LLMSAL
Trigger: GAGGGCAGACATCAACAGCAAGAAGGTGCTGAGGGA...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCGTGGCAGGGGCTTCTTaGAAGTGGTCTCTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LLALCGKTELSPHSVPGPVAGAS*KWSLPQ
Trigger: CTGAGGCAGAGACCACTTCAAAGAAGCCCCTGCCAC...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGAGCTTCTGCAGCACCTaGCTAGCTATGGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQSFCST*LAMGSG
Trigger: TCCACTGCCCATAGCTAGCAAGGTGCTGCAGAAGCT...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCTTCTGGGTCTTGTGTaGCTTAGCCAGAAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAALLGLV*LSQKGP
Trigger: CGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAAG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp ATAGATAGAAGCCAGAACACCACCTCCACCTTGCTGTTGCCAGGCTaGGGGGTGCCATCCTCAGGATGTGTGGGGACTTCTGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IDRSQNTTSTLLLPG*GVPSSGCVGTSASC
Trigger: GCAGGAGGCAGAAGTCCCCACACATCCTGAGGATGGCACCCCTCAGCCTGGCAACAGCAAGGTGGAGGTGGTGTTCTGGCTTCTATCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp CTGCCTTGTTCTCTGTGCTGTGTGCTGACAGGTTCCACAGAGCACTaGGCACACTCTTTAGGGTCGACTCCTTGGAGGCCCGCAGCACAC +
Preference number: 5 (lower is better)
Translates to: LPCSLCCVLTGSTEH*AHSLGSTPWRPAAH
Trigger: GTGTGCTGCGGGCCTCCAAGGAGTCGACCCTAAAGAGTGTGCTCAGTGCTCTGTGGAACCTGTCAGCACACAGCACAGAGAACAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp CATCAGAGTCATAGAAGCAGTACACAGCTTCCTCTGTGGGTGTTGTaGGGCATAGCGACTGCAGGGCACCATCTCCGCGGGTCCGGGTCT +
Preference number: 5 (lower is better)
Translates to: HQSHRSSTQLPLWVL*GIATAGHHLRGSGS
Trigger: AGACCCGGACCCGCGGAGATGGTGCCCTGCAGTCGCTATGCCTCACAACACCCACAGAGGAAGCTGTGTACTGCTTCTATGACTCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GTGCCACAGGCATTGCTCACGATGGTCAAACTGTGTGATGTGAGGTaGTGCAGCAGTGTCTGCAGGCAGTTGTGGTCACGGAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: VPQALLTMVKLCDVR*CSSVCRQLWSRSTC
Trigger: GCAGGTGCTCCGTGACCACAACTGCCTGCAGACACTGCTGCAGCACCTCACATCACACAGTTTGACCATCGTGAGCAATGCCTGTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CTTTGCATGAATGGGATCCGCACAGGTGACTTCTGGGTCTTGTGTTaGTTAGCCAGAAGGGCCCGTGCTGGTGACTTGGGCACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LCMNGIRTGDFWVLC*LARRARAGDLGTRD
Trigger: GTCCCTGGTGCCCAAGTCACCAGCACGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GCTAGAGTTGGTCTTAGAAGTGGCCACGTCCTCTGTTTGCACCACTaGGTCACTGGTCTTGCGCTGTGGAGTTCCAGCGGGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: ARVGLRSGHVLCLHH*VTGLALWSSSGAVF
Trigger: GAAGACAGCCCCGCTGGAACTCCACAGCGCAAGACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGCCACTTCTAAGACCAACTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp TCTGGAGAGCTGGACATGGCCAGCAGTGTGCGCGCAGTATCTTCCTaGTCGCGCGTTGCCAACATAGATAGAAGCCAGAACACCACCTCC +
Preference number: 5 (lower is better)
Translates to: SGELDMASSVRAVSS*SRVANIDRSQNTTS
Trigger: GGAGGTGGTGTTCTGGCTTCTATCTATGTTGGCAACGCGCGACCAGGAAGATACTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CCTTCAGGGCCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACTCCTGCAGTGCCTGGTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PSGPPPGAPAAHMRP*SWSFSTPAVPGSQR
Trigger: TCTTTGGGAACCAGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 90 bp GGGCCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATGGAGCTaGTCATTTTCAACTCCTGCAGTGCCACAATCCTCCCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: GPPPGAPAAHMRPWS*SFSTPAVPQSSQVF
Trigger: AAACACCTGGGAGGATTGTGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140828.8
CDS-3UTR CAA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCTGGCAGATGGCTGCCTaGTTCTCTGTGCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LLALCGKTELSPHSVPGPWQMAA*FSVLCA
Trigger: AGCACACAGCACAGAGAACAAGGCAGCCATCTGCCA...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TCCACAGGTTTTATGTCAAGAGGGCTGTTTGCCCTTGGCAATCTCTCAGCGGCCTTGGAGTGGACGAGGTaGCGTAGCATGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: STGFMSRGLFALGNLSAALEWTR*RSMPTA
Trigger: GGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAA...GGCCGCTGAGAGATTGCCAAGGGCAAACAGCCCTCTTGACATAAAACCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTCCCATGGCGATCATCTaGTGTTTGGAGTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAPMAII*CLEWTR
Trigger: CCTCGTCCACTCCAAACACAAGATGATCGCCATGGG...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCTTCTCTGGGGGCAAGTTTCTCAGGGACTTaGCTCAGGCTGTCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SQKRDLRPAQGTVPSLGASFSGT*LRLSAG
Trigger: ACCTGCAGACAGCCTGAGCAAAGTCCCTGAGAAACT...TGCCCCCAGAGAAGGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTGTCCCGGGTCCCAGCTTCTGCAGCACCTaGCTAGCTATGGGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: LLALCGKTELSPHSVPGPSFCST*LAMGSG
Trigger: TCCACTGCCCATAGCTAGCAAGGTGCTGCAGAAGCT...GGGACCCGGGACAGAGTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGCTGAGGCAGGAGGCTaGGTGAGTACTGGTCCATCC +
Preference number: 5 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLAEAGG*VSTGPS
Trigger: GGATGGACCAGTACTCACCAAGCCTCCTGCCTCAGC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GTTCCAGAGGGTGCCACAGGCATTGCTCACGATGGTCAAACTGTGTaGTGTGAGGTGCTGCAGCAGTGTCTGCAGGCAGTTGTGGTCACG +
Preference number: 5 (lower is better)
Translates to: VPEGATGIAHDGQTV*CEVLQQCLQAVVVT
Trigger: CGTGACCACAACTGCCTGCAGACACTGCTGCAGCACCTCACATCACACAGTTTGACCATCGTGAGCAATGCCTGTGGCACCCTCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp GTTCCCTTGGCAACGGTATGTGAGGGTGCTCACCAGGAAACCCAGTaGACCATCTACCTGGCAGATGGCTGCCTTGTTCTCTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VPLATVCEGAHQETQ*TIYLADGCLVLCAV
Trigger: CACAGCACAGAGAACAAGGCAGCCATCTGCCAGGTAGATGGTGCACTGGGTTTCCTGGTGAGCACCCTCACATACCGTTGCCAAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp ACGCAGCTCCACATCCTGCTGGACATACAGCTCATGAAGGGCCAGTaGACTGAGGCTGGAGGCGCAGGAGAAATTCTCATCTGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: TQLHILLDIQLMKGQ*TEAGGAGEILIWLL
Trigger: GAGAAGCCAGATGAGAATTTCTCCTGCGCCTCCAGCCTCAGTGCACTGGCCCTTCATGAGCTGTATGTCCAGCAGGATGTGGAGCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp CCTGGGCATGGCCAAGCTGATACATCTCTGCAGAAGTTCCTCTTCTaGCCTTGGGCTAGGAGAGCTGTCCTGTTTACTACCCTGCTCCGG +
Preference number: 5 (lower is better)
Translates to: PGHGQADTSLQKFLF*PWARRAVLFTTLLR
Trigger: CCGGAGCAGGGTAGTAAACAGGACAGCTCTCCTAGCCCAAGGGCAGAAGAGGAACTTCTGCAGAGATGTATCAGCTTGGCCATGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp ACCAGCTGCTCATATGAGGCCATGGAGCTGGTCATTTTCAACTCCTaGAGTGCCACAATCCTCCCAGGTGTTTGTGTCCTGGGCCGGGAC +
Preference number: 5 (lower is better)
Translates to: TSCSYEAMELVIFNS*SATILPGVCVLGRD
Trigger: GTCCCGGCCCAGGACACAAACACCTGGGAGGATTGTGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140828.8
CDS-3UTR CAA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTATCTCCAAAGCTGTCCTaGGATGGTCCAGAGCCGTGC +
Preference number: 5 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLSPKLS*DGPEPC
Trigger: GCACGGCTCTGGACCATCCAAGGACAGCTTTGGAGA...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCAGTGTCTGCAGGCAGTaGTGGTCACGGAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: PASEKANTPGRVIINQLPSVCRQ*WSRSTC
Trigger: GCAGGTGCTCCGTGACCACAACTGCCTGCAGACACT...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACAGGTCTGTGAAGAGCTaGAGGACGGGGTCTTGGCGA +
Preference number: 5 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDRSVKS*RTGSWR
Trigger: TCGCCAAGACCCCGTCCTCAAGCTCTTCACAGACCT...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp AACACTGTAGTAGAACAGGGCGGGAGACGGTATGGCAGCAGAGGACACACTGACCTTCTGGGTCTTGTGTaGCTTAGCCAGAAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: NTVVEQGGRRYGSRGHTDLLGLV*LSQKGP
Trigger: CGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAAG...GTCAGTGTGTCCTCTGCTGCCATACCGTCTCCCGCCCTGTTCTACTACAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCTACCTTAGGTCTGGATCCCACTCTCCACCTGGATCCCTGCCCTGTAGCAGCTGGTGACTTCTGGGTCTaGTGTTGCTTAGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ATLGLDPTLHLDPCPVAAGDFWV*CCLARR
Trigger: CCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACC...AGCTGCTACAGGGCAGGGATCCAGGTGGAGAGTGGGATCCAGACCTAAGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAACCAATTACCCTCGCCTGGCTGGCCTTaGCATGAATGGGATCCGCAC +
Preference number: 5 (lower is better)
Translates to: PASEKANTPGRVIINQLPSPGWP*HEWDPH
Trigger: GTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCGA...GGGTAATTGGTTAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp ACACTGTCTAGGTCAGAGGCTGGATCGGAGCCAGCCACCTCCTCCTaGCATTTCTGGGTTATCTCAGTGGGCCTTATGTCTGACCTCAAG +
Preference number: 5 (lower is better)
Translates to: TLSRSEAGSEPATSS*HFWVISVGLMSDLK
Trigger: CTTGAGGTCAGACATAAGGCCCACTGAGATAACCCAGAAATGCCAGGAGGAGGTGGCTGGCTCCGATCCAGCCTCTGACCTAGACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TGGCTACCTGGGCTCCCACAGTGTGTGGTGCACAGGCTCAGTCTACAACCCCAGGTCTCTGTCTCAAGCTaGGAGAGATGGCTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: WLPGLPQCVVHRLSLQPQVSVSS*ERWLEL
Trigger: TAACTCTAGCCATCTCTCCAAGCTTGAGACAGAGAC...CTGGGGTTGTAGACTGAGCCTGTGCACCACACACTGTGGGAGCCCAGGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTATGGCAGATGGCTGCCTaGTTCTCTGTGCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLWQMAA*FSVLCA
Trigger: AGCACACAGCACAGAGAACAAGGCAGCCATCTGCCA...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGACAGCCAACGCCAGCTaGGCCTTGGCCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLTNYPSANYRLPQCRAETANAS*ALALAA
Trigger: GGCTGCCAAGGCCAAGGCCAAGCTGGCGTTGGCTGT...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCCACTTCCCTCATCTCAGAAGAGGGACTTGAGGCCAGCTCAAGGGACGGTCCCAGACCTGGGGATTCCTaGATGAAAGTCAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: ATSLISEEGLEASSRDGPRPGDS*MKVSCL
Trigger: AAGACAGCTGACTTTCATCAAGGAATCCCCAGGTCT...GGGACCGTCCCTTGAGCTGGCCTCAAGTCCCTCTTCTGAGATGAGGGAAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 90 bp CGGTATTCTTCGTCAAATGACAGCTTCATCACTGCACAGGTAGCCTaGCAGATCTGCGGCTCGATTGGGACAGGAGTTTCTGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RYSSSNDSFITAQVA*QICGSIGTGVSVPL
Trigger: CAGCGGGACAGAAACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTCATTTGACGAAGAATACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS CCA 90 bp TCATATGAGGCCATGGAGCTGGTCATTTTCAACTCCTGCAGTGCCTaGTTCCCAAAGAAGGCTGAGTGCAGCAGGCTCAGGAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SYEAMELVIFNSCSA*FPKKAECSRLRSPK
Trigger: CTTGGGACTCCTGAGCCTGCTGCACTCAGCCTTCTTTGGGAACCAGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCTCCAAAGGTGAGGTaGGTGAGGGTCATGCCAGCG +
Preference number: 5 (lower is better)
Translates to: STVEMLLALCGKTELSPHSPKVR*VRVMPA
Trigger: CGCTGGCATGACCCTCACCAACCTCACCTTTGGAGA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAAGCACCTTCTTGCTGTaGATGTCTGCCCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPSTFLL*MSALHD
Trigger: GTCATGGAGGGCAGACATCAACAGCAAGAAGGTGCT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAGCGATCATCTTGTGTTaGGAGTGGACGAGGTTGCGT +
Preference number: 5 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLAIILC*EWTRLR
Trigger: ACGCAACCTCGTCCACTCCAAACACAAGATGATCGC...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAGCGATCATCTTGTGTTaGGAGTGGACGAGGTTGCGT +
Preference number: 5 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPAIILC*EWTRLR
Trigger: ACGCAACCTCGTCCACTCCAAACACAAGATGATCGC...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CTAGAGCCACTTGGCTCTGTTCTGAAAAGGGCCTTCCCTTTCCCCTCCCTACCAAGTTTCTCAGGGACTTaGCTCAGGCTGTCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LEPLGSVLKRAFPFPSLPSFSGT*LRLSAG
Trigger: ACCTGCAGACAGCCTGAGCAAAGTCCCTGAGAAACT...TGGTAGGGAGGGGAAAGGGAAGGCCCTTTTCAGAACAGAGCCAAGTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCAAAGGCCGAGGCCACCTaGCGGAGCCGGGCGGGCATG +
Preference number: 5 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPKAEAT*RSRAGM
Trigger: CATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTT...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS TCA 90 bp ATGTCTGCCCTCCATGACAGATTACGCAGAATACTGGAAACAACCTaGTGCAGCTCCTCGCTCTCAGAGCCAAGCTGGGCCACAATGGCT +
Preference number: 5 (lower is better)
Translates to: MSALHDRLRRILETT*CSSSLSEPSWATMA
Trigger: AGCCATTGTGGCCCAGCTTGGCTCTGAGAGCGAGGAGCTGCATCAGGTTGTTTCCAGTATTCTGCGTAATCTGTCATGGAGGGCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 90 bp TCGTCAAATGACAGCTTCATCACTGCACAGGTAGCCTGGCAGATCTaGGGCTCGATTGGGACAGGAGTGTCTCCTGTACCACTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SSNDSFITAQVAWQI*GSIGTGVSPVPLSV
Trigger: GACAGAAAGTGGTACAGGAGACACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTCATTTGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 90 bp CGGTATTCTTCGTCAAATGACAGCTTCATCACTGCACAGGTAGCCTaGCAGATCTGCGGCTCGATTGGGACAGGAGTGTCTCCTGTACCA +
Preference number: 5 (lower is better)
Translates to: RYSSSNDSFITAQVA*QICGSIGTGVSPVP
Trigger: TGGTACAGGAGACACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTCATTTGACGAAGAATACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TCCACAGTAGAGATGTTGTTGGCTCTCTGTGGAAAGACCGAGCTGAGTCCTCACTCCCTCAGCACCTTCTaGCTGTTGATGTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: STVEMLLALCGKTELSPHSLSTF*LLMSAL
Trigger: GAGGGCAGACATCAACAGCAAGAAGGTGCTGAGGGA...GTGAGGACTCAGCTCGGTCTTTCCACAGAGAGCCAACAACATCTCTACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 90 bp GCCAACCTCCCTCAGCACCTTCTTGCTGTTGATGTCTGCCCTCCATaGCAGATTACGCAGAATACTGGAAACAACCTGATGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ANLPQHLLAVDVCPP*QITQNTGNNLMQLL
Trigger: GAGGAGCTGCATCAGGTTGTTTCCAGTATTCTGCGTAATCTGTCATGGAGGGCAGACATCAACAGCAAGAAGGTGCTGAGGGAGGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp GCACTCTTCAGCCCGCCTCGGAGAAGGCAAACACCCCTGGCAGAGTCATTATTAAGACCTGGGGATTCCTaGATGAAAGTCAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: ALFSPPRRRQTPLAESLLRPGDS*MKVSCL
Trigger: AAGACAGCTGACTTTCATCAAGGAATCCCCAGGTCT...TAATAATGACTCTGCCAGGGGTGTTTGCCTTCTCCGAGGCGGGCTGAAGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp TTATTAACCAATTACCCCAGCGCTAATTACAGGCTTCCACAGTGCAGGGCTGAGGTCTCTGTCTCAAGCTaGGAGAGATGGCTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: LLTNYPSANYRLPQCRAEVSVSS*ERWLEL
Trigger: TAACTCTAGCCATCTCTCCAAGCTTGAGACAGAGAC...CTCAGCCCTGCACTGTGGAAGCCTGTAATTAGCGCTGGGGTAATTGGTTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS-3UTR CAA 90 bp CAGATCGATGGAGTGGCTCGCTTTATTAAAGATATGAACAAGAATCAGAAGCCATTTAGGGTCGACTCCTaGGAGGCCCGCAGCACACAT +
Preference number: 5 (lower is better)
Translates to: QIDGVARFIKDMNKNQKPFRVDS*EARSTH
Trigger: ATGTGTGCTGCGGGCCTCCAAGGAGTCGACCCTAAA...TGGCTTCTGATTCTTGTTCATATCTTTAATAAAGCGAGCCACTCCATCGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS TCA 72 bp CTCAGGCCGTCCAGGGCTCGCCCGCACAGGCAGGCGTaGGGGGCTCTCAGAGCTGGTGCGTCTGGGCGCACG +
Preference number: 6 (lower is better)
Translates to: LRPSRARPHRQA*GALRAGASGRT
Trigger: CGTGCGCCCAGACGCACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGGGCGAGCCCTGGACGGCCTGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ATGAGCGGCGGCCAGGCACCAAGGCCGAGGCCACCTTaGGGAGCCGGGCGGGCATGGCTGCCCCCAGGCATT +
Preference number: 6 (lower is better)
Translates to: MSGGQAPRPRPP*GAGRAWLPPGI
Trigger: AATGCCTGGGGGCAGCCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTTGGTGCCTGGCCGCCGCTCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TCCCCACCAGCCTCCTTCTCGGCTTCTAGGCCACCCTaGCGGGCAGGTGGGGTGCGGGCCAGTGCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SPPASFSASRPP*RAGGVRASAWP
Trigger: GGGCCAGGCACTGGCCCGCACCCCACCTGCCCGCCAGGGTGGCCTAGAAGCCGAGAAGGAGGCTGGTGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp AATGAGCGGCGGCCAGGCACCAAGGCCGAGGCCACCTaGCGGAGCCGGGCGGGCATGGCTGCCCCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: NERRPGTKAEAT*RSRAGMAAPRH
Trigger: ATGCCTGGGGGCAGCCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTTGGTGCCTGGCCGCCGCTCATT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCCCGGGGCTGTCTGGCAGCTCGCTGGGACTCACTGTaGCACTGCCCAGCCCGCTGCACGGGTCACTGGGGA +
Preference number: 6 (lower is better)
Translates to: ARGCLAARWDSL*HCPARCTGHWG
Trigger: TCCCCAGTGACCCGTGCAGCGGGCTGGGCAGTGGCACAGTGAGTCCCAGCGAGCTGCCAGACAGCCCCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TCGCCCGCACAGGCAGGCGTGAGGGGCTCTCAGAGCTaGTGCGTCTGGGCGCACGTGGGGCGAGACCTGGCT +
Preference number: 6 (lower is better)
Translates to: SPAQAGVRGSQS*CVWAHVGRDLA
Trigger: AGCCAGGTCTCGCCCCACGTGCGCCCAGACGCACCAGCTCTGAGAGCCCCTCACGCCTGCCTGTGCGGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CATCCACATCGCTGCCCTGGGGAGCCACAGGGCCGCTaGCAGGGGCCTGTGGCGGATCCCTGCTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: HPHRCPGEPQGR*QGPVADPCSPG
Trigger: GCCTGGAGAGCAGGGATCCGCCACAGGCCCCTGCCAGCGGCCCTGTGGCTCCCCAGGGCAGCGATGTGGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp CTGGTCTCAGGCTGCCCAGGAGGTGCCGGTGGCGTCTaGCTGCGGCTCGGTGGCATCGTCTGCCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LVSGCPGGAGGV*LRLGGIVCPGL
Trigger: CAGCCCCGGGCAGACGATGCCACCGAGCCGCAGCAAGACGCCACCGGCACCTCCTGGGCAGCCTGAGACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGCTGGGATGGACACCGGAAGAGAGGTGGACCCGGATaGTCGCCACGCCCTGCCCAGCTCGGCCTCACCAGG +
Preference number: 6 (lower is better)
Translates to: GWDGHRKRGGPG*SPRPAQLGLTR
Trigger: CCTGGTGAGGCCGAGCTGGGCAGGGCGTGGCGAGCATCCGGGTCCACCTCTCTTCCGGTGTCCATCCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCCGGTGGCGTCTTGCTGCGGCTCGGTGGCATCGTCTaGCCGGGGCTGTCTGGCAGCTCGCTGGGACTCACT +
Preference number: 6 (lower is better)
Translates to: AGGVLLRLGGIV*PGLSGSSLGLT
Trigger: AGTGAGTCCCAGCGAGCTGCCAGACAGCCCCGGGCAGACGATGCCACCGAGCCGCAGCAAGACGCCACCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp TCTCAGGCTGCCCAGGAGGTGCCGGTGGCGTCTTGCTaGGGCTCGGTGGCATCGTCTGCCCGGGGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: SQAAQEVPVASC*GSVASSARGCL
Trigger: CAGACAGCCCCGGGCAGACGATGCCACCGAGCCGCAGCAAGACGCCACCGGCACCTCCTGGGCAGCCTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCGGCATGGAGAGCAGGACTGAGCACGGCCCTCCCTTaGCGCCTCCTGCCCAGGGTCCCCCGAGCTGAGACT +
Preference number: 6 (lower is better)
Translates to: PAWRAGLSTALP*RLLPRVPRAET
Trigger: AGTCTCAGCTCGGGGGACCCTGGGCAGGAGGCGCCAAGGGAGGGCCGTGCTCAGTCCTGCTCTCCATGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CAGGCAGGCGTGAGGGGCTCTCAGAGCTGGTGCGTCTaGGCGCACGTGGGGCGAGACCTGGCTTGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: QAGVRGSQSWCV*AHVGRDLAWPV
Trigger: CACAGGCCAAGCCAGGTCTCGCCCCACGTGCGCCCAGACGCACCAGCTCTGAGAGCCCCTCACGCCTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCAGCGGCCTGGCCTCGCCATCACTTCCCCGGCGAGTaGCATTGGCCTGGGTGGTGGGCACAGAGACAGCGC +
Preference number: 6 (lower is better)
Translates to: AAAWPRHHFPGE*HWPGWWAQRQR
Trigger: GCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATGGCGAGGCCAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp CTGGGCAGCGGCCTGGCCTCGCCATCACTTCCCCGGCGAGTGGCATaGGCCTGGGTGGTGGGCACAGAGACAGCGCTATCGGACCTGCGG +
Preference number: 6 (lower is better)
Translates to: LGSGLASPSLPRRVA*AWVVGTETALSDLR
Trigger: CCGCAGGTCCGATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATGGCGAGGCCAGGCCGCTGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CTGGGCCGAGTCTGTCCGCGCACAGGGTCATCACGGTaGTCGGCCAGTGCAGCCAGCGGGCAAGGCGTCATG +
Preference number: 6 (lower is better)
Translates to: LGRVCPRTGSSR*SASAASGQGVM
Trigger: CATGACGCCTTGCCCGCTGGCTGCACTGGCCGAGCACCGTGATGACCCTGTGCGCGGACAGACTCGGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CCGGAAGAGAGGTGGACCCGGATGCTCGCCACGCCCTaGCCAGCTCGGCCTCACCAGGACCAGCCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: PEERWTRMLATP*PARPHQDQPPQ
Trigger: TTGAGGAGGCTGGTCCTGGTGAGGCCGAGCTGGGCAGGGCGTGGCGAGCATCCGGGTCCACCTCTCTTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGCTGTCTGGCAGCTCGCTGGGACTCACTGTGCCACTaGCCAGCCCGCTGCACGGGTCACTGGGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: GCLAARWDSLCH*PARCTGHWGWS
Trigger: GCTCCATCCCCAGTGACCCGTGCAGCGGGCTGGGCAGTGGCACAGTGAGTCCCAGCGAGCTGCCAGACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCTCAGCCCGGCTGGGAAGGTCCAGGTCCAGTCGGCTaGGCCGAGTCTGTCCGCGCACAGGGTCATCACGGT +
Preference number: 6 (lower is better)
Translates to: AQPGWEGPGPVG*AESVRAQGHHG
Trigger: ACCGTGATGACCCTGTGCGCGGACAGACTCGGCCCAGCCGACTGGACCTGGACCTTCCCAGCCGGGCTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TGCCCAGCCCGCTGCACGGGTCACTGGGGATGGAGCTaGCAATGGAGCGGCTCTCGAAGCTGCCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: CPARCTGHWGWS*QWSGSRSCPGS
Trigger: GCTCCCTGGGCAGCTTCGAGAGCCGCTCCATTGCCAGCTCCATCCCCAGTGACCCGTGCAGCGGGCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GAACTGGCTGGTCTCAGGCTGCCCAGGAGGTGCCGGTaGCGTCTTGCTGCGGCTCGGTGGCATCGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ELAGLRLPRRCR*RLAAARWHRLP
Trigger: GGGCAGACGATGCCACCGAGCCGCAGCAAGACGCCACCGGCACCTCCTGGGCAGCCTGAGACCAGCCAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCAAGGCCGAGGCCACCTTGCGGAGCCGGGCGGGCATaGCTGCCCCCAGGCATTCACGCAAAGCCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: PRPRPPCGAGRA*LPPGIHAKPPV
Trigger: AACTGGAGGCTTTGCGTGAATGCCTGGGGGCAGCCATGCCCGCCCGGCTCCGCAAGGTGGCCTCGGCCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCGAGGCGGGCTGGAGGAGTGGCACTCCTGGGCGGGTaGCGCAAAGCTGCCAGCTCAGAGATCTTGCCCGGT +
Preference number: 6 (lower is better)
Translates to: ARRAGGVALLGG*RKAASSEILPG
Trigger: ACCGGGCAAGATCTCTGAGCTGGCAGCTTTGCGCCACCCGCCCAGGAGTGCCACTCCTCCAGCCCGCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp AGCATGCCCACGGCCCCCAGGTCCCACAACAGTTCCTaGTCGCGGGGGCTGCGGGCAGACAGGTTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SMPTAPRSHNSS*SRGLRADRFQR
Trigger: CCTCTGGAACCTGTCTGCCCGCAGCCCCCGCGATCAGGAACTGTTGTGGGACCTGGGGGCCGTGGGCATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCGTGCATCTTTGGCACCAGGCGCTCCGGGGATCCCTaGGCGCCCCACAGACCCAGCCTCAGTGCCATGAAG +
Preference number: 6 (lower is better)
Translates to: ACIFGTRRSGDP*APHRPSLSAMK
Trigger: CTTCATGGCACTGAGGCTGGGTCTGTGGGGCGCGCAGGGATCCCCGGAGCGCCTGGTGCCAAAGATGCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CTGTCCGCGCACAGGGTCATCACGGTGCTCGGCCAGTaGAGCCAGCGGGCAAGGCGTCATGTGTTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: LSAHRVITVLGQ*SQRARRHVFPG
Trigger: ACCCGGGAACACATGACGCCTTGCCCGCTGGCTGCACTGGCCGAGCACCGTGATGACCCTGTGCGCGGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCTCGCTGGGACTCACTGTGCCACTGCCCAGCCCGCTaGACGGGTCACTGGGGATGGAGCTGGCAATGGAGC +
Preference number: 6 (lower is better)
Translates to: ARWDSLCHCPAR*TGHWGWSWQWS
Trigger: GCTCCATTGCCAGCTCCATCCCCAGTGACCCGTGCAGCGGGCTGGGCAGTGGCACAGTGAGTCCCAGCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCCCCCACCACCCACCGCACGCTCTGGGCAGGCAGGTaGCCTCAGACGCAGCTCCACATCCTGCTGGACATA +
Preference number: 6 (lower is better)
Translates to: APTTHRTLWAGR*PQTQLHILLDI
Trigger: TATGTCCAGCAGGATGTGGAGCTGCGTCTGAGGCCACCTGCCTGCCCAGAGCGTGCGGTGGGTGGTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TGCCTGCCGGTTTCTCGCGCTTTAGAGCCCGTGGGATaGCGGATGCCCGCCGAGGTGGTGGTGCAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: CLPVSRALEPVG*RMPAEVVVQWL
Trigger: CAGCCACTGCACCACCACCTCGGCGGGCATCCGCCATCCCACGGGCTCTAAAGCGCGAGAAACCGGCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGGTCTTGGCGAGGCGGGCTGGAGGAGTGGCACTCCTaGGCGGGTGGCGCAAAGCTGCCAGCTCAGAGATCT +
Preference number: 6 (lower is better)
Translates to: GSWRGGLEEWHS*AGGAKLPAQRS
Trigger: AGATCTCTGAGCTGGCAGCTTTGCGCCACCCGCCCAGGAGTGCCACTCCTCCAGCCCGCCTCGCCAAGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGCCTGTGGGGACCTCTGTGCTGCCAGGGGCTGCCGTaGGGATACCCGCAGCTCATCGCAACGAGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: GLWGPLCCQGLP*GYPQLIATRGA
Trigger: TGCTCCTCTCGTTGCGATGAGCTGCGGGTATCCCCACGGCAGCCCCTGGCAGCACAGAGGTCCCCACAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCCTGGCCTCGCCATCACTTCCCCGGCGAGTGGCATTaGCCTGGGTGGTGGGCACAGAGACAGCGCTATCGG +
Preference number: 6 (lower is better)
Translates to: AWPRHHFPGEWH*PGWWAQRQRYR
Trigger: CCGATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATGGCGAGGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp GGCCTGGCCTCGCCATCACTTCCCCGGCGAGTGGCATaGGCCTGGGTGGTGGGCACAGAGACAGCGCTATCG +
Preference number: 6 (lower is better)
Translates to: GLASPSLPRRVA*AWVVGTETALS
Trigger: CGATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATGGCGAGGCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CTGCAGGGCACCATCTCCGCGGGTCCGGGTCTGGCATaGGCTATCCCTGTTGGACCGAGCACTCTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: LQGTISAGPGLA*AIPVGPSTLGP
Trigger: AGGCCCCAGAGTGCTCGGTCCAACAGGGATAGCTCATGCCAGACCCGGACCCGCGGAGATGGTGCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp GAGTTCCAGCGGGGCTGTCTTCGGGTGACGAGACCCTaGGAGGCAGGGCAGTGGCAGGCAGTGTGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: EFQRGCLRVTRP*EAGQWQAVCCA
Trigger: TGCGCAGCACACTGCCTGCCACTGCCCTGCCTCTCAGGGTCTCGTCACCCGAAGACAGCCCCGCTGGAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CTTGCGCTGTGGAGTTCCAGCGGGGCTGTCTTCGGGTaGCGAGACCCTGAGAGGCAGGGCAGTGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LALWSSSGAVFG*RDPERQGSGRQ
Trigger: CTGCCTGCCACTGCCCTGCCTCTCAGGGTCTCGTCACCCGAAGACAGCCCCGCTGGAACTCCACAGCGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ATCTGCTCCAAGCGCGAAGCCCGGATCTGCGCCCGCTaGACCATCTCGTCGGAGGTACCGAAGCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ICSKREARICAR*TISSEVPKRSS
Trigger: GGAGGAGCGCTTCGGTACCTCCGACGAGATGGTGCAGCGGGCGCAGATCCGGGCTTCGCGCTTGGAGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TGCCTGGGGAGACAGCCATGGCTGCGGCCTGATACTTaGCGGGTCGGTGGGCTAGCAGGTTCCGCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: CLGRQPWLRPDT*RVGGLAGSAEQ
Trigger: CTGCTCTGCGGAACCTGCTAGCCCACCGACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp AAGGCTCTGGGCTTGCGACGCCGTGAGCCAGGCACCTaGGTCCGGCGCCTGGGCATGGCCAAGCTGATACAT +
Preference number: 6 (lower is better)
Translates to: KALGLRRREPGT*VRRLGMAKLIH
Trigger: ATGTATCAGCTTGGCCATGCCCAGGCGCCGGACCCAGGTGCCTGGCTCACGGCGTCGCAAGCCCAGAGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp GCTGGAGAGGTCTGTGAAGAGCTTGAGGACGGGGTCTaGGCGAGGCGGGCTGGAGGAGTGGCACTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: AGEVCEELEDGV*ARRAGGVALLG
Trigger: GCCCAGGAGTGCCACTCCTCCAGCCCGCCTCGCCAAGACCCCGTCCTCAAGCTCTTCACAGACCTCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp GCAGCTCGGCCTGTAGGTTTCTGCCTGTCCCCAGGCCCGGCTGGCTaGTCCCTGGAGGGTCCCTGTAAGGTCTCGTCACTGAGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: AARPVGFCLSPGPAG*SLEGPCKVSSLSEA
Trigger: AGCCTCGCTCAGTGACGAGACCTTACAGGGACCCTCCAGGGACAAGCCAGCCGGGCCTGGGGACAGGCAGAAACCTACAGGCCGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CCTCATGGGGGAAGGGCGCTGAGGCAGGAGGCTTGGTaGGTACTGGTCCATCCACATCGCTGCCCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: PHGGRALRQEAW*VLVHPHRCPGE
Trigger: CTCCCCAGGGCAGCGATGTGGATGGACCAGTACTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCATGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ACCCGGTCCTGGGCTTCCAACAGCTCCTTGTCAATCTaGTCCAAGCGCGAAGCCCGGATCTGCGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: TRSWASNSSLSI*SKREARICARC
Trigger: GCAGCGGGCGCAGATCCGGGCTTCGCGCTTGGAGCAGATTGACAAGGAGCTGTTGGAAGCCCAGGACCGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp AACGATGTTGTGCAGGGCCGCATTGGCGCGCATGCGTaGATCTTTGGCACCAGGCGCTCCGGGGATCCCTGC +
Preference number: 6 (lower is better)
Translates to: NDVVQGRIGAHA*IFGTRRSGDPC
Trigger: GCAGGGATCCCCGGAGCGCCTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGGCCCTGCACAACATCGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCCCCGTTTCTCAGGACGCCAGGCACCTCCAGCCTCTaGTGCAGGCTTTCGCCCTTTCCTGAGCTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: APFLRTPGTSSL*CRLSPFPELGG
Trigger: CCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGCAGAGGCTGGAGGTGCCTGGCGTCCTGAGAAACGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CAGACAGCCCGAGCGGCGCATGGCTACACAGCTCTCTaGAGAGCTGGACATGGCCAGCAGTGTGCGCGCAGT +
Preference number: 6 (lower is better)
Translates to: QTARAAHGYTAL*RAGHGQQCARS
Trigger: ACTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCTGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCAGCTCCTCGCTCTCAGAGCCAAGCTGGGCCACAATaGCTTCCATGCAGCCTCGGCGGGCACACAGTGTGG +
Preference number: 6 (lower is better)
Translates to: AAPRSQSQAGPQ*LPCSLGGHTVW
Trigger: CCACACTGTGTGCCCGCCGAGGCTGCATGGAAGCCATTGTGGCCCAGCTTGGCTCTGAGAGCGAGGAGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp AAAGACTGGGCACGCAGGTGCCTGGGGAGACAGCCATaGCTGCGGCCTGATACTTGGCGGGTCGGTGGGCTA +
Preference number: 6 (lower is better)
Translates to: KDWARRCLGRQP*LRPDTWRVGGL
Trigger: TAGCCCACCGACCCGCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGGTGTGTTCTGTGCTCTTACCAGCGCCTGCTGCTTTaGGCCGGTGAGATCGGGTCTGCCTGGCAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: GCVLCSYQRLLL*AGEIGSAWQGQ
Trigger: CTGCCCCTGCCAGGCAGACCCGATCTCACCGGCCCAAAGCAGCAGGCGCTGGTAAGAGCACAGAACACACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp AGCGACTGCAGGGCACCATCTCCGCGGGTCCGGGTCTaGCATGAGCTATCCCTGTTGGACCGAGCACTCTGG +
Preference number: 6 (lower is better)
Translates to: SDCRAPSPRVRV*HELSLLDRALW
Trigger: CCAGAGTGCTCGGTCCAACAGGGATAGCTCATGCCAGACCCGGACCCGCGGAGATGGTGCCCTGCAGTCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGGCTCTCACAGGGAGTGTGGCAGGCTGGGCTGCCCTaGATGGAGTCTCCTTTCTGCCTGCCGGTTTCTCGC +
Preference number: 6 (lower is better)
Translates to: GLSQGVWQAGLP*MESPFCLPVSR
Trigger: GCGAGAAACCGGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCCTGTGAGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GTGGGAGTGGCCAGAGGGGACCGCCTAGGCAGGGGCTaGGATGCTGGAGAGGTCTGTGAAGAGCTTGAGGAC +
Preference number: 6 (lower is better)
Translates to: VGVARGDRLGRG*DAGEVCEELED
Trigger: GTCCTCAAGCTCTTCACAGACCTCTCCAGCATCCCAGCCCCTGCCTAGGCGGTCCCCTCTGGCCACTCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CATCACTTCCCCGGCGAGTGGCATTGGCCTGGGTGGTaGGCACAGAGACAGCGCTATCGGACCTGCGGGACA +
Preference number: 6 (lower is better)
Translates to: HHFPGEWHWPGW*AQRQRYRTCGT
Trigger: TGTCCCGCAGGTCCGATAGCGCTGTCTCTGTGCCCACCACCCAGGCCAATGCCACTCGCCGGGGAAGTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp TCTCCGCGGGTCCGGGTCTGGCATGAGCTATCCCTGTaGGACCGAGCACTCTGGGGCCTGCTGAGTGGTAGC +
Preference number: 6 (lower is better)
Translates to: SPRVRVWHELSL*DRALWGLLSGS
Trigger: GCTACCACTCAGCAGGCCCCAGAGTGCTCGGTCCAACAGGGATAGCTCATGCCAGACCCGGACCCGCGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp TGGGTTATCTCAGTGGGCCTTATGTCTGACCTCAAGGCTCTGGGCTaGCGACGCCGTGAGCCAGGCACCTGGGTCCGGCGCCTGGGCATG +
Preference number: 6 (lower is better)
Translates to: WVISVGLMSDLKALG*RRREPGTWVRRLGM
Trigger: CATGCCCAGGCGCCGGACCCAGGTGCCTGGCTCACGGCGTCGCAAGCCCAGAGCCTTGAGGTCAGACATAAGGCCCACTGAGATAACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp CAGGCACCTCCAGCCTCTGCTGCAGGCTTTCGCCCTTTCCTGAGCTaGGAGGGCTGGAGGGTGGAGCCTGCTGACACCCCGGACACCAAA +
Preference number: 6 (lower is better)
Translates to: QAPPASAAGFRPFLS*EGWRVEPADTPDTK
Trigger: TTTGGTGTCCGGGGTGTCAGCAGGCTCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGCAGAGGCTGGAGGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp TCGGACCTGCGGGACACACTAATATGTGGCAGGGATGCGTACCGCTaGACTGTCTCAGGCCGTCCAGGGCTCGCCCGCACAGGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: SDLRDTLICGRDAYR*TVSGRPGLARTGRR
Trigger: ACGCCTGCCTGTGCGGGCGAGCCCTGGACGGCCTGAGACAGTCAAGCGGTACGCATCCCTGCCACATATTAGTGTGTCCCGCAGGTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CACGGAGCACCTGCCTGTAGTCCTCCCGTGTGGCAATaGGGCTTGACACGTTGCGCAGGATCCCACCGCCAC +
Preference number: 6 (lower is better)
Translates to: HGAPACSPPVWQ*GLTRCAGSHRH
Trigger: GTGGCGGTGGGATCCTGCGCAACGTGTCAAGCCTCATTGCCACACGGGAGGACTACAGGCAGGTGCTCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CACCTCCAGCCTCTGCTGCAGGCTTTCGCCCTTTCCTaGGCTTGGAGGGCTGGAGGGTGGAGCCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: HLQPLLQAFALS*AWRAGGWSLLT
Trigger: TGTCAGCAGGCTCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGCAGAGGCTGGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp TGGGGGAGCCATGCCTGCTGGTGGGAAAGCCTGCTATaGCAGCACTCAGACCCTCATGGGGGAAGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: WGSHACWWESLL*QHSDPHGGRAL
Trigger: CAGCGCCCTTCCCCCATGAGGGTCTGAGTGCTGTCATAGCAGGCTTTCCCACCAGCAGGCATGGCTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCCGAGTGTCCAACTCAGCTTCCAGAGCCCTCTGCTTaGGGACGTAAAGACTGGGCACGCAGGTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AECPTQLPEPSA*GRKDWARRCLG
Trigger: CCCCAGGCACCTGCGTGCCCAGTCTTTACGTCCGCAAGCAGAGGGCTCTGGAAGCTGAGTTGGACACTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp TGGCAGGCTGGGCTGCCCTGGATGGAGTCTCCTTTCTaGCTGCCGGTTTCTCGCGCTTTAGAGCCCGTGGGA +
Preference number: 6 (lower is better)
Translates to: WQAGLPWMESPF*LPVSRALEPVG
Trigger: TCCCACGGGCTCTAAAGCGCGAGAAACCGGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGGTTGGGCTCTCACAGGGAGTGTGGCAGGCTGGGCTaGCCTGGATGGAGTCTCCTTTCTGCCTGCCGGTTT +
Preference number: 6 (lower is better)
Translates to: GLGSHRECGRLG*PGWSLLSACRF
Trigger: AAACCGGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCCTGTGAGAGCCCAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCTGTCTTCGGAAGCCTGAGCGATCCGAGGACTCGCTaGCACTGGAGCGAGCTGAAGCCATACGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: AVFGSLSDPRTR*HWSELKPYAPG
Trigger: GCCTGGTGCGTATGGCTTCAGCTCGCTCCAGTGGCAGCGAGTCCTCGGATCGCTCAGGCTTCCGAAGACAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GAGACTGGCTGGAGAGGAGACCGGGGCTTTCTCCACTaGGGAGTCACTGGCCATTGTGGCCGCTGCCATAGG +
Preference number: 6 (lower is better)
Translates to: ETGWRGDRGFLH*GVTGHCGRCHR
Trigger: CCTATGGCAGCGGCCACAATGGCCAGTGACTCCGCAGTGGAGAAAGCCCCGGTCTCCTCTCCAGCCAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGATGGTGGCCCGGCTCAGCTCTCCAAAGCTGTCCTTaGATGGTCCAGAGCCGTGCACTGGGCTTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: GWWPGSALQSCP*MVQSRALGFPL
Trigger: CAGAGGGAAGCCCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTTGGAGAGCTGAGCCGGGCCACCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TCTGGAGCAGCAGTGGCAGACAGCCCGAGCGGCGCATaGCTACACAGCTCTCTGGAGAGCTGGACATGGCCA +
Preference number: 6 (lower is better)
Translates to: SGAAVADSPSGA*LHSSLESWTWP
Trigger: TGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCCATGCGCCGCTCGGGCTGTCTGCCACTGCTGCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCGGCTGGGAGAAAACGATGTTGTGCAGGGCCGCATTaGCGCGCATGCGTGCATCTTTGGCACCAGGCGCTC +
Preference number: 6 (lower is better)
Translates to: PAGRKRCCAGPH*RACVHLWHQAL
Trigger: GAGCGCCTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGGCCCTGCACAACATCGTTTTCTCCCAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CACTGCACAGGTAGCCTGGCAGATCTGCGGCTCGATTaGGACAGGAGTTTCTGTCCCGCTGTCCCGCGCCTG +
Preference number: 6 (lower is better)
Translates to: HCTGSLADLRLD*DRSFCPAVPRL
Trigger: CAGGCGCGGGACAGCGGGACAGAAACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS CCA 72 bp CTGCTTGCGGACGTAAAGACTGGGCACGCAGGTGCCTaGGGAGACAGCCATGGCTGCGGCCTGATACTTGGC +
Preference number: 6 (lower is better)
Translates to: LLADVKTGHAGA*GDSHGCGLILG
Trigger: GCCAAGTATCAGGCCGCAGCCATGGCTGTCTCCCCAGGCACCTGCGTGCCCAGTCTTTACGTCCGCAAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp AGTCTGGGTTGGGCTCTCACAGGGAGTGTGGCAGGCTaGGCTGCCCTGGATGGAGTCTCCTTTCTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SLGWALTGSVAG*AALDGVSFLPA
Trigger: GGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCCTGTGAGAGCCCAACCCAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CTGTCCTGTTTACTACCCTGCTCCGGGCCTCGAGCATaGTTGGCCGGCTGTTCAGGGGCCTCAGGCTCACTG +
Preference number: 6 (lower is better)
Translates to: LSCLLPCSGPRA*LAGCSGASGSL
Trigger: CAGTGAGCCTGAGGCCCCTGAACAGCCGGCCAACCATGCTCGAGGCCCGGAGCAGGGTAGTAAACAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCTGCAGGCTTTCGCCCTTTCCTGAGCTTGGAGGGCTaGAGGGTGGAGCCTGCTGACACCCCGGACACCAAA +
Preference number: 6 (lower is better)
Translates to: AAGFRPFLSLEG*RVEPADTPDTK
Trigger: TTTGGTGTCCGGGGTGTCAGCAGGCTCCACCCTCCAGCCCTCCAAGCTCAGGAAAGGGCGAAAGCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp CGGATGGTGGCCCGGCTCAGCTCTCCAAAGCTGTCCTaGGATGGTCCAGAGCCGTGCACTGGGCTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: RMVARLSSPKLS*DGPEPCTGLPS
Trigger: AGAGGGAAGCCCAGTGCACGGCTCTGGACCATCCAAGGACAGCTTTGGAGAGCTGAGCCGGGCCACCATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp ATAGCAGGGCGGGGTCTCATCCACGATCAGTCTGGGTaGGGCTCTCACAGGGAGTGTGGCAGGCTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: IAGRGLIHDQSG*GSHRECGRLGC
Trigger: GCAGCCCAGCCTGCCACACTCCCTGTGAGAGCCCAACCCAGACTGATCGTGGATGAGACCCCGCCCTGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp TCCTGTTTACTACCCTGCTCCGGGCCTCGAGCATGGTaGGCCGGCTGTTCAGGGGCCTCAGGCTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: SCLLPCSGPRAW*AGCSGASGSLR
Trigger: CCTCAGTGAGCCTGAGGCCCCTGAACAGCCGGCCAACCATGCTCGAGGCCCGGAGCAGGGTAGTAAACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp AGGGCACCATCTCCGCGGGTCCGGGTCTGGCATGAGCTATCCCTGTaGGACCGAGCACTCTGGGGCCTGCTGAGTGGTAGCTCCAATCCT +
Preference number: 6 (lower is better)
Translates to: RAPSPRVRVWHELSL*DRALWGLLSGSSNP
Trigger: AGGATTGGAGCTACCACTCAGCAGGCCCCAGAGTGCTCGGTCCAACAGGGATAGCTCATGCCAGACCCGGACCCGCGGAGATGGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp AGTCAGGGAATAGCAGGGCGGGGTCTCATCCACGATCAGTCTGGGTaGGGCTCTCACAGGGAGTGTGGCAGGCTGGGCTGCCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: SQGIAGRGLIHDQSG*GSHRECGRLGCPGW
Trigger: CCATCCAGGGCAGCCCAGCCTGCCACACTCCCTGTGAGAGCCCAACCCAGACTGATCGTGGATGAGACCCCGCCCTGCTATTCCCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp ACAGCACTCAGACCCTCATGGGGGAAGGGCGCTGAGGCAGGAGGCTaGGTGAGTACTGGTCCATCCACATCGCTGCCCTGGGGAGCCACA +
Preference number: 6 (lower is better)
Translates to: TALRPSWGKGAEAGG*VSTGPSTSLPWGAT
Trigger: TGTGGCTCCCCAGGGCAGCGATGTGGATGGACCAGTACTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCATGAGGGTCTGAGTGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp GCGCAGGATCCCACCGCCACTCTCGATGACTGCCAGGGAGTTCCCTaGGCAACGGTATGTGAGGGTGCTCACCAGGAAACCCAGTGCACC +
Preference number: 6 (lower is better)
Translates to: AQDPTATLDDCQGVP*ATVCEGAHQETQCT
Trigger: GGTGCACTGGGTTTCCTGGTGAGCACCCTCACATACCGTTGCCAAGGGAACTCCCTGGCAGTCATCGAGAGTGGCGGTGGGATCCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp GGAGAGCTGTCCTGTTTACTACCCTGCTCCGGGCCTCGAGCATGGTaGGCCGGCTGTTCAGGGGCCTCAGGCTCACTGAGGGAACTAGCT +
Preference number: 6 (lower is better)
Translates to: GELSCLLPCSGPRAW*AGCSGASGSLRELA
Trigger: AGCTAGTTCCCTCAGTGAGCCTGAGGCCCCTGAACAGCCGGCCAACCATGCTCGAGGCCCGGAGCAGGGTAGTAAACAGGACAGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp GTCCGGGCGGCAGGCTCCGGGCCCAGGGCTGGAGCATaGAACTTGAGGTTGTACAGGCTACTGATGTCAGTC +
Preference number: 6 (lower is better)
Translates to: VRAAGSGPRAGA*NLRLYRLLMSV
Trigger: GACTGACATCAGTAGCCTGTACAACCTCAAGTTTCATGCTCCAGCCCTGGGCCCGGAGCCTGCCGCCCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
ENSMUST00000138909.8
CDS TCA 72 bp CTCACCAGGACCAGCCTCCTCAAGCCCCTCCAGGGATaGATCGCTGTCAAGGTTCTCTGCCTGGCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: LTRTSLLKPLQG*IAVKVLCLAGD
Trigger: GTCCCCAGCCAGGCAGAGAACCTTGACAGCGATTCATCCCTGGAGGGGCTTGAGGAGGCTGGTCCTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GAGGTACCGAAGCGCTCCTCCATCAGCGAGCGGATGTaGTGGGCCTCGAACTCCAGCTGCTGCCGAATCAGA +
Preference number: 6 (lower is better)
Translates to: EVPKRSSISERM*WASNSSCCRIR
Trigger: TCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGTACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp AGAAAACGATGTTGTGCAGGGCCGCATTGGCGCGCATaGGTGCATCTTTGGCACCAGGCGCTCCGGGGATCC +
Preference number: 6 (lower is better)
Translates to: RKRCCAGPHWRA*VHLWHQALRGS
Trigger: GGATCCCCGGAGCGCCTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGGCCCTGCACAACATCGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GATCGCGGGGGCTGCGGGCAGACAGGTTCCAGAGGGTaGCACAGGCATTGCTCACGATGGTCAAACTGTGTG +
Preference number: 6 (lower is better)
Translates to: DRGGCGQTGSRG*HRHCSRWSNCV
Trigger: CACACAGTTTGACCATCGTGAGCAATGCCTGTGGCACCCTCTGGAACCTGTCTGCCCGCAGCCCCCGCGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CTGAAGGAAGGGACCGCCAAGGAACATAGACATCACTaGTGGGCTGGCGGGCTCAGCTGTGGTGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LKEGTAKEHRHH*WAGGLSCGGSS
Trigger: GCTGCTGCCACCACAGCTGAGCCCGCCAGCCCAGCAGTGATGTCTATGTTCCTTGGCGGTCCCTTCCTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GAGAGGGACATCGGCCCATCCTGTGCGACCAGCTTCTaGAGCACCTTGCTAGCTATGGGCAGTGGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: ERDIGPSCATSF*STLLAMGSGEA
Trigger: GGCCTCTCCACTGCCCATAGCTAGCAAGGTGCTGCAGAAGCTGGTCGCACAGGATGGGCCGATGTCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ACAGCTTCCTCTGTGGGTGTTGTGAGGCATAGCGACTaGAGGGCACCATCTCCGCGGGTCCGGGTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: TASSVGVVRHSD*RAPSPRVRVWH
Trigger: ATGCCAGACCCGGACCCGCGGAGATGGTGCCCTGCAGTCGCTATGCCTCACAACACCCACAGAGGAAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp AGCCCGTGGGATGGCGGATGCCCGCCGAGGTGGTGGTaGAGTGGCTGGTGGTTCCTCATCAGAGTCATAGAA +
Preference number: 6 (lower is better)
Translates to: SPWDGGCPPRWW*SGWWFLIRVIE
Trigger: TTCTATGACTCTGATGAGGAACCACCAGCCACTGCACCACCACCTCGGCGGGCATCCGCCATCCCACGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCCCTTGGGCTAGGAGAGCTGTCCTGTTTACTACCCTaGTCCGGGCCTCGAGCATGGTTGGCCGGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: ALGLGELSCLLP*SGPRAWLAGCS
Trigger: TGAACAGCCGGCCAACCATGCTCGAGGCCCGGAGCAGGGTAGTAAACAGGACAGCTCTCCTAGCCCAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CTGGCCAGTGGAGGTGGCACTCGCCTGGCTGGCCTTTaGATGAATGGGATCCGCACAGGTGACTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LASGGGTRLAGL*MNGIRTGDFWV
Trigger: GACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCGAGTGCCACCTCCACTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CTCTGGAGTCCGGGCGGCAGGCTCCGGGCCCAGGGCTaGAGCATGAAACTTGAGGTTGTACAGGCTACTGAT +
Preference number: 6 (lower is better)
Translates to: LWSPGGRLRAQG*SMKLEVVQATD
Trigger: ATCAGTAGCCTGTACAACCTCAAGTTTCATGCTCCAGCCCTGGGCCCGGAGCCTGCCGCCCGGACTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
ENSMUST00000138909.8
CDS CCA 72 bp GTACCGAAGCGCTCCTCCATCAGCGAGCGGATGTGCTaGGCCTCGAACTCCAGCTGCTGCCGAATCAGATCC +
Preference number: 6 (lower is better)
Translates to: VPKRSSISERMC*ASNSSCCRIRS
Trigger: GGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGTAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGCGCATGGCTACACAGCTCTCTGGAGAGCTGGACATaGCCAGCAGTGTGCGCGCAGTATCTTCCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: GAWLHSSLESWT*PAVCAQYLPGR
Trigger: GCGACCAGGAAGATACTGCGCGCACACTGCTGGCCATGTCCAGCTCTCCAGAGAGCTGTGTAGCCATGCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp AAGGAAGGGACCGCCAAGGAACATAGACATCACTGCTaGGCTGGCGGGCTCAGCTGTGGTGGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: KEGTAKEHRHHC*AGGLSCGGSSS
Trigger: GCTGCTGCTGCCACCACAGCTGAGCCCGCCAGCCCAGCAGTGATGTCTATGTTCCTTGGCGGTCCCTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGCCCGTGGAAGATAGAGAGGACAGAGAGCTGCACCTaGAGAGGGACATCGGCCCATCCTGTGCGACCAGCT +
Preference number: 6 (lower is better)
Translates to: GPWKIERTESCT*RGTSAHPVRPA
Trigger: AGCTGGTCGCACAGGATGGGCCGATGTCCCTCTCCAGGTGCAGCTCTCTGTCCTCTCTATCTTCCACGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TCTCACAGGGAGTGTGGCAGGCTGGGCTGCCCTGGATaGAGTCTCCTTTCTGCCTGCCGGTTTCTCGCGCTT +
Preference number: 6 (lower is better)
Translates to: SHRECGRLGCPG*SLLSACRFLAL
Trigger: AAGCGCGAGAAACCGGCAGGCAGAAAGGAGACTCCATCCAGGGCAGCCCAGCCTGCCACACTCCCTGTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp GTCTGCTGCACCCGGTCCTGGGCTTCCAACAGCTCCTaGTCAATCTGCTCCAAGCGCGAAGCCCGGATCTGC +
Preference number: 6 (lower is better)
Translates to: VCCTRSWASNSS*SICSKREARIC
Trigger: GCAGATCCGGGCTTCGCGCTTGGAGCAGATTGACAAGGAGCTGTTGGAAGCCCAGGACCGGGTGCAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp TCCGGCTGGGAGAAAACGATGTTGTGCAGGGCCGCATaGGCGCGCATGCGTGCATCTTTGGCACCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: SGWEKTMLCRAA*ARMRASLAPGA
Trigger: AGCGCCTGGTGCCAAAGATGCACGCATGCGCGCCAATGCGGCCCTGCACAACATCGTTTTCTCCCAGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp TCGCGGGGGCTGCGGGCAGACAGGTTCCAGAGGGTGCCACAGGCATaGCTCACGATGGTCAAACTGTGTGATGTGAGGTGCTGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: SRGLRADRFQRVPQA*LTMVKLCDVRCCSS
Trigger: ACTGCTGCAGCACCTCACATCACACAGTTTGACCATCGTGAGCAATGCCTGTGGCACCCTCTGGAACCTGTCTGCCCGCAGCCCCCGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp GCTAGCAGGTTCCGCAGAGCAGCAGCACTACCCATGGCGATCATCTaGTGTTTGGAGTGGACGAGGTTGCGTAGCATGCCCACGGCCCCC +
Preference number: 6 (lower is better)
Translates to: ASRFRRAAALPMAII*CLEWTRLRSMPTAP
Trigger: GGGGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAAACACAAGATGATCGCCATGGGTAGTGCTGCTGCTCTGCGGAACCTGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp ACATGCAGCACACGCATCTCCTTGCGTGCCAGGCCCTaGTCCGGCTGGGAGAAAACGATGTTGTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TCSTRISLRARP*SGWEKTMLCRA
Trigger: GGCCCTGCACAACATCGTTTTCTCCCAGCCGGATCAGGGCCTGGCACGCAAGGAGATGCGTGTGCTGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CACCTGCCTGTAGTCCTCCCGTGTGGCAATGAGGCTTaGCACGTTGCGCAGGATCCCACCGCCACTCTCGAT +
Preference number: 6 (lower is better)
Translates to: HLPVVLPCGNEA*HVAQDPTATLD
Trigger: ATCGAGAGTGGCGGTGGGATCCTGCGCAACGTGTCAAGCCTCATTGCCACACGGGAGGACTACAGGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp AGACGCAGCTCCACATCCTGCTGGACATACAGCTCATaGAGGGCCAGTGCACTGAGGCTGGAGGCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RRSSTSCWTYSS*RASALRLEAQE
Trigger: CTCCTGCGCCTCCAGCCTCAGTGCACTGGCCCTTCATGAGCTGTATGTCCAGCAGGATGTGGAGCTGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp AGCTATCCCTGTTGGACCGAGCACTCTGGGGCCTGCTaGGTGGTAGCTCCAATCCTGCCCGGTTCCTACAGG +
Preference number: 6 (lower is better)
Translates to: SYPCWTEHSGAC*VVAPILPGSYR
Trigger: CCTGTAGGAACCGGGCAGGATTGGAGCTACCACTCAGCAGGCCCCAGAGTGCTCGGTCCAACAGGGATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp AGGGGCCTGTGGCGGATCCCTGCTCTCCAGGCTAGGTaGCGTGCTAGAGTTGGTCTTAGAAGTGGCCACGTC +
Preference number: 6 (lower is better)
Translates to: RGLWRIPALQAR*RARVGLRSGHV
Trigger: GACGTGGCCACTTCTAAGACCAACTCTAGCACGTCACCTAGCCTGGAGAGCAGGGATCCGCCACAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CTGAGGGGTGCCATCCTCAGGATGTGTGGGGACTTCTaGCTCCTGCTCCTCCTCTACTGCCACAGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: LRGAILRMCGDF*LLLLLYCHRLH
Trigger: GTGAAGCCTGTGGCAGTAGAGGAGGAGCAGGAGGCAGAAGTCCCCACACATCCTGAGGATGGCACCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ACACCACCTCCACCTTGCTGTTGCCAGGCTGAGGGGTaGCATCCTCAGGATGTGTGGGGACTTCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: TPPPPCCCQAEG*HPQDVWGLLPP
Trigger: AGGAGGCAGAAGTCCCCACACATCCTGAGGATGGCACCCCTCAGCCTGGCAACAGCAAGGTGGAGGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp AGAGCTGCACCTGGAGAGGGACATCGGCCCATCCTGTaGGACCAGCTTCTGCAGCACCTTGCTAGCTATGGG +
Preference number: 6 (lower is better)
Translates to: RAAPGEGHRPIL*DQLLQHLASYG
Trigger: CCCATAGCTAGCAAGGTGCTGCAGAAGCTGGTCGCACAGGATGGGCCGATGTCCCTCTCCAGGTGCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ATCTTGCCCGGTCGGTGGAGGCTCCGTGAACGTTGTTaGTCAGGGCTGGGGGCTTTGGTGACAGTTTCTGGC +
Preference number: 6 (lower is better)
Translates to: ILPGRWRLRERC*SGLGALVTVSG
Trigger: GCCAGAAACTGTCACCAAAGCCCCCAGCCCTGAGCAACAACGTTCACGGAGCCTCCACCGACCGGGCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp AGCATCTCTCCTGGTCCAGTTCTTCCAGCAGGCGGATaGTGGCCCGGCTCAGCTCTCCAAAGCTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: SISPGPVLPAGG*WPGSALQSCPW
Trigger: CCAAGGACAGCTTTGGAGAGCTGAGCCGGGCCACCATCCGCCTGCTGGAAGAACTGGACCAGGAGAGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCACCGCCACTCTCGATGACTGCCAGGGAGTTCCCTTaGCAACGGTATGTGAGGGTGCTCACCAGGAAACCC +
Preference number: 6 (lower is better)
Translates to: PPPLSMTAREFP*QRYVRVLTRKP
Trigger: GGGTTTCCTGGTGAGCACCCTCACATACCGTTGCCAAGGGAACTCCCTGGCAGTCATCGAGAGTGGCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGCGGATGCCCGCCGAGGTGGTGGTGCAGTGGCTGGTaGTTCCTCATCAGAGTCATAGAAGCAGTACACAGC +
Preference number: 6 (lower is better)
Translates to: GGCPPRWWCSGW*FLIRVIEAVHS
Trigger: GCTGTGTACTGCTTCTATGACTCTGATGAGGAACCACCAGCCACTGCACCACCACCTCGGCGGGCATCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GTGGGATGGCGGATGCCCGCCGAGGTGGTGGTGCAGTaGCTGGTGGTTCCTCATCAGAGTCATAGAAGCAGT +
Preference number: 6 (lower is better)
Translates to: VGWRMPAEVVVQ*LVVPHQSHRSS
Trigger: ACTGCTTCTATGACTCTGATGAGGAACCACCAGCCACTGCACCACCACCTCGGCGGGCATCCGCCATCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GTGGGAAAGCCTGCTATGACAGCACTCAGACCCTCATaGGGGAAGGGCGCTGAGGCAGGAGGCTTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: VGKPAMTALRPS*GKGAEAGGLVS
Trigger: ACTCACCAAGCCTCCTGCCTCAGCGCCCTTCCCCCATGAGGGTCTGAGTGCTGTCATAGCAGGCTTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp CCCACCGCCACTCTCGATGACTGCCAGGGAGTTCCCTaGGCAACGGTATGTGAGGGTGCTCACCAGGAAACC +
Preference number: 6 (lower is better)
Translates to: PTATLDDCQGVP*ATVCEGAHQET
Trigger: GGTTTCCTGGTGAGCACCCTCACATACCGTTGCCAAGGGAACTCCCTGGCAGTCATCGAGAGTGGCGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp CCCATGGCGATCATCTTGTGTTTGGAGTGGACGAGGTaGCGTAGCATGCCCACGGCCCCCAGGTCCCACAAC +
Preference number: 6 (lower is better)
Translates to: PMAIILCLEWTR*RSMPTAPRSHN
Trigger: GTTGTGGGACCTGGGGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAAACACAAGATGATCGCCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp TTTCAACTCCTGCAGTGCCACAATCCTCCCAGGTGTTaGTGTCCTGGGCCGGGACCCCCTGTGGCCCCACAT +
Preference number: 6 (lower is better)
Translates to: FQLLQCHNPPRC*CPGPGPPVAPH
Trigger: ATGTGGGGCCACAGGGGGTCCCGGCCCAGGACACAAACACCTGGGAGGATTGTGGCACTGCAGGAGTTGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140828.8
CDS CAA 90 bp CTACCGCTGTTCAAGCTATCATTAGAGAGGCTAGTGTGGGCTGCCTaGAGCCTCAAAAGAGGGTGCGCCCGGCTGCCAGCCTCACGCCTC +
Preference number: 6 (lower is better)
Translates to: LPLFKLSLERLVWAA*SLKRGCARLPASRL
Trigger: GAGGCGTGAGGCTGGCAGCCGGGCGCACCCTCTTTTGAGGCTCAAGGCAGCCCACACTAGCCTCTCTAATGATAGCTTGAACAGCGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp AGCCAGAACACCACCTCCACCTTGCTGTTGCCAGGCTaGGGGGTGCCATCCTCAGGATGTGTGGGGACTTCT +
Preference number: 6 (lower is better)
Translates to: SQNTTSTLLLPG*GVPSSGCVGTS
Trigger: AGAAGTCCCCACACATCCTGAGGATGGCACCCCTCAGCCTGGCAACAGCAAGGTGGAGGTGGTGTTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CCAGTGGAGGTGGCACTCGCCTGGCTGGCCTTTGCATaGATGGGATCCGCACAGGTGACTTCTGGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: PVEVALAWLAFA*MGSAQVTSGSC
Trigger: ACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCAGGCGAGTGCCACCTCCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp GTGTGCTGCGCAGGATGTGGGGGACATCTTCATCTTTaGTTCGACGCCAGGTCGTACCCGGAGGAGCTACCC +
Preference number: 6 (lower is better)
Translates to: VCCAGCGGHLHL*FDARSYPEELP
Trigger: GGGTAGCTCCTCCGGGTACGACCTGGCGTCGAATCAAAGATGAAGATGTCCCCCACATCCTGCGCAGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGGCTCAGCTGTGGTGGCAGCAGCAGCCAGGGATGGTaGATCATCATCGTCAAAGCAGCCAGAATCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GLSCGGSSSQGW*IIIVKAARIRG
Trigger: GCCTCTGATTCTGGCTGCTTTGACGATGATGATGCACCATCCCTGGCTGCTGCTGCCACCACAGCTGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GTCCGGCGCCTGGGCATGGCCAAGCTGATACATCTCTaGAGAAGTTCCTCTTCTGCCCTTGGGCTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: VRRLGMAKLIHL*RSSSSALGLGE
Trigger: CTCTCCTAGCCCAAGGGCAGAAGAGGAACTTCTGCAGAGATGTATCAGCTTGGCCATGCCCAGGCGCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGCCGCTGCCTGATGCAGCCATGTGACAATGGAGTTTaGGCCCTCTTGGATAGCCTGCCACTCCACACTGTC +
Preference number: 6 (lower is better)
Translates to: GRCLMQPCDNGV*ALLDSLPLHTV
Trigger: GACAGTGTGGAGTGGCAGGCTATCCAAGAGGGCGCAAACTCCATTGTCACATGGCTGCATCAGGCAGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGTCTTAGAAGTGGCCACGTCCTCTGTTTGCACCACTaGGTCACTGGTCTTGCGCTGTGGAGTTCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: GLRSGHVLCLHH*VTGLALWSSSG
Trigger: CCCGCTGGAACTCCACAGCGCAAGACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGCCACTTCTAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp ATCTCTCCTGGTCCAGTTCTTCCAGCAGGCGGATGGTaGCCCGGCTCAGCTCTCCAAAGCTGTCCTTGGATG +
Preference number: 6 (lower is better)
Translates to: ISPGPVLPAGGW*PGSALQSCPWM
Trigger: CATCCAAGGACAGCTTTGGAGAGCTGAGCCGGGCCACCATCCGCCTGCTGGAAGAACTGGACCAGGAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGTCATGCCAGCGTAGCGGCGCAGGGCAAGGTTGAGTaGGTCCCGGGTCATCTTGTGCATTTCATAGTCCAC +
Preference number: 6 (lower is better)
Translates to: GHASVAAQGKVE*VPGHLVHFIVH
Trigger: GTGGACTATGAAATGCACAAGATGACCCGGGACCCACTCAACCTTGCCCTGCGCCGCTACGCTGGCATGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TCGCTGTCAAGGTTCTCTGCCTGGCTGGGGACAGCATaGCCCGTGGAAGATAGAGAGGACAGAGAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: SLSRFSAWLGTA*PVEDREDRELH
Trigger: GTGCAGCTCTCTGTCCTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCCTCCAGGGATGAATCGCTGTCAAGGTTCTCTGCCTaGCTGGGGACAGCATGGCCCGTGGAAGATAGAGAG +
Preference number: 6 (lower is better)
Translates to: PSRDESLSRFSA*LGTAWPVEDRE
Trigger: CTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGCGATTCATCCCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GATGGCGGATGCCCGCCGAGGTGGTGGTGCAGTGGCTaGTGGTTCCTCATCAGAGTCATAGAAGCAGTACAC +
Preference number: 6 (lower is better)
Translates to: DGGCPPRWWCSG*WFLIRVIEAVH
Trigger: GTGTACTGCTTCTATGACTCTGATGAGGAACCACCAGCCACTGCACCACCACCTCGGCGGGCATCCGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCTGGCGCACCAGCTGCTCATATGAGGCCATGGAGCTaGTCATTTTCAACTCCTGCAGTGCGCAAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PGAPAAHMRPWS*SFSTPAVRKGP
Trigger: GGGACCCTTGCGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138909.8
CDS CAA 72 bp ATCGGCCCATCCTGTGCGACCAGCTTCTGCAGCACCTaGCTAGCTATGGGCAGTGGAGAGGCCACCAGTTTC +
Preference number: 6 (lower is better)
Translates to: IGPSCATSFCST*LAMGSGEATSF
Trigger: GAAACTGGTGGCCTCTCCACTGCCCATAGCTAGCAAGGTGCTGCAGAAGCTGGTCGCACAGGATGGGCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp GAGGACAGCTCTGATCTGCGACGCCGAAGGAGACCTGGGGATTCCTaGATGAAAGTCAGCTGTCTTCGGAAGCCTGAGCGATCCGAGGAC +
Preference number: 6 (lower is better)
Translates to: EDSSDLRRRRRPGDS*MKVSCLRKPERSED
Trigger: GTCCTCGGATCGCTCAGGCTTCCGAAGACAGCTGACTTTCATCAAGGAATCCCCAGGTCTCCTTCGGCGTCGCAGATCAGAGCTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp GGATTCCTTGATGAAAGTCAGCTGTCTTCGGAAGCCTaGGCGATCCGAGGACTCGCTGCCACTGGAGCGAGC +
Preference number: 6 (lower is better)
Translates to: GFLDESQLSSEA*AIRGLAATGAS
Trigger: GCTCGCTCCAGTGGCAGCGAGTCCTCGGATCGCTCAGGCTTCCGAAGACAGCTGACTTTCATCAAGGAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CTTCAGGGCCTCCACCTGGCGCACCAGCTGCTCATATaGGGCCATGGAGCTGGTCATTTTCAACTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LQGLHLAHQLLI*GHGAGHFQLLQ
Trigger: CTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGGCCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105359.8
ENSMUST00000138909.8
ENSMUST00000140828.8
CDS GCA 72 bp CGAATCAGATCCATCTGCATCGAAAACGTGTCCACGTaGGGCAGCTCATCCAAGCGCTTGGACAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: RIRSICIENVST*GSSSKRLDRPW
Trigger: CCAGGGCCTGTCCAAGCGCTTGGATGAGCTGCCGCACGTGGACACGTTTTCGATGCAGATGGATCTGATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCCTCGAACTCCAGCTGCTGCCGAATCAGATCCATCTaGATCGAAAACGTGTCCACGTGCGGCAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: ASNSSCCRIRSI*IENVSTCGSSS
Trigger: GGATGAGCTGCCGCACGTGGACACGTTTTCGATGCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp AGCGAGCGGATGTGCTGGGCCTCGAACTCCAGCTGCTaGCGAATCAGATCCATCTGCATCGAAAACGTGTCC +
Preference number: 6 (lower is better)
Translates to: SERMCWASNSSC*RIRSICIENVS
Trigger: GGACACGTTTTCGATGCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GACAGCTTCATCACTGCACAGGTAGCCTGGCAGATCTaGGGCTCGATTGGGACAGGAGTTTCTGTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: DSFITAQVAWQI*GSIGTGVSVPL
Trigger: CAGCGGGACAGAAACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS GCA 72 bp GCTGTTCAAGCTATCATTAGAGAGGCTAGTGTGGGCTaGCTTGAGCCTCAAAAGAGGGTGCGCCCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AVQAIIREASVG*LEPQKRVRPAA
Trigger: GGCAGCCGGGCGCACCCTCTTTTGAGGCTCAAGGCAGCCCACACTAGCCTCTCTAATGATAGCTTGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGGCTAGCAGGTTCCGCAGAGCAGCAGCACTACCCATaGCGATCATCTTGTGTTTGGAGTGGACGAGGTTGC +
Preference number: 6 (lower is better)
Translates to: GLAGSAEQQHYP*RSSCVWSGRGC
Trigger: GCAACCTCGTCCACTCCAAACACAAGATGATCGCCATGGGTAGTGCTGCTGCTCTGCGGAACCTGCTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCAGGGATGAATCGCTGTCAAGGTTCTCTGCCTGGCTaGGGACAGCATGGCCCGTGGAAGATAGAGAGGACA +
Preference number: 6 (lower is better)
Translates to: PGMNRCQGSLPG*GQHGPWKIERT
Trigger: TGTCCTCTCTATCTTCCACGGGCCATGCTGTCCCCAGCCAGGCAGAGAACCTTGACAGCGATTCATCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACTCCTGCAGTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: PPPGAPAAHMRP*SWSFSTPAVPG
Trigger: ACCAGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 72 bp CACTGCACAGGTAGCCTGGCAGATCTGCGGCTCGATTaGGACAGGAGTGTCTCCTGTACCACTTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HCTGSLADLRLD*DRSVSCTTFCP
Trigger: GGGACAGAAAGTGGTACAGGAGACACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 72 bp CCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACTCCTGCAGTGCGCAAG +
Preference number: 6 (lower is better)
Translates to: PPPGAPAAHMRP*SWSFSTPAVRK
Trigger: CTTGCGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138909.8
CDS CAA 72 bp CACAGAGCACTGAGCACACTCTTTAGGGTCGACTCCTaGGAGGCCCGCAGCACACATTCCATCAAGGCGGTC +
Preference number: 6 (lower is better)
Translates to: HRALSTLFRVDS*EARSTHSIKAV
Trigger: GACCGCCTTGATGGAATGTGTGCTGCGGGCCTCCAAGGAGTCGACCCTAAAGAGTGTGCTCAGTGCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp CTGCGGGCAGACAGGTTCCAGAGGGTGCCACAGGCATaGCTCACGATGGTCAAACTGTGTGATGTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: LRADRFQRVPQA*LTMVKLCDVRC
Trigger: GCACCTCACATCACACAGTTTGACCATCGTGAGCAATGCCTGTGGCACCCTCTGGAACCTGTCTGCCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp TTCAAGCTATCATTAGAGAGGCTAGTGTGGGCTGCCTaGAGCCTCAAAAGAGGGTGCGCCCGGCTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: FKLSLERLVWAA*SLKRGCARLPA
Trigger: GGCTGGCAGCCGGGCGCACCCTCTTTTGAGGCTCAAGGCAGCCCACACTAGCCTCTCTAATGATAGCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp AGTGTGCTGCGCAGGATGTGGGGGACATCTTCATCTTaGATTCGACGCCAGGTCGTACCCGGAGGAGCTACC +
Preference number: 6 (lower is better)
Translates to: SVLRRMWGTSSS*IRRQVVPGGAT
Trigger: GGTAGCTCCTCCGGGTACGACCTGGCGTCGAATCAAAGATGAAGATGTCCCCCACATCCTGCGCAGCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 90 bp GTACCCTTTGCCTTCTCAGGACCGTTAGGTAGCCGGGGACTCCCATaGATCTTAGTGGAAGTTGTGCCCCGTTTCTCAGGACGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: VPFAFSGPLGSRGLP*ILVEVVPRFSGRQA
Trigger: TGCCTGGCGTCCTGAGAAACGGGGCACAACTTCCACTAAGATCAATGGGAGTCCCCGGCTACCTAACGGTCCTGAGAAGGCAAAGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp TCAGAAGATGCTTCCAGGCTGGCTTTGGCCGCTGCCTaGTGCAGCCATGTGACAATGGAGTTTGCGCCCTCT +
Preference number: 6 (lower is better)
Translates to: SEDASRLALAAA*CSHVTMEFAPS
Trigger: AGAGGGCGCAAACTCCATTGTCACATGGCTGCATCAGGCAGCGGCCAAAGCCAGCCTGGAAGCATCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CCTGGCTGGCCTTTGCATGAATGGGATCCGCACAGGTaGCTTCTGGGTCTTGTGTTGCTTAGCCAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: PGWPLHEWDPHR*LLGLVLLSQKG
Trigger: GCCCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCCAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp ATCAGCGAGCGGATGTGCTGGGCCTCGAACTCCAGCTaGTGCCGAATCAGATCCATCTGCATCGAAAACGTG +
Preference number: 6 (lower is better)
Translates to: ISERMCWASNSS*CRIRSICIENV
Trigger: CACGTTTTCGATGCAGATGGATCTGATTCGGCAGCAGCTGGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCAACGGTATGTGAGGGTGCTCACCAGGAAACCCAGTaGACCATCTACCTGGCAGATGGCTGCCTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: ATVCEGAHQETQ*TIYLADGCLVL
Trigger: GAGAACAAGGCAGCCATCTGCCAGGTAGATGGTGCACTGGGTTTCCTGGTGAGCACCCTCACATACCGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp TCATCTTGTGTTTGGAGTGGACGAGGTTGCGTAGCATaGCCACGGCCCCCAGGTCCCACAACAGTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: SSCVWSGRGCVA*PRPPGPTTVPD
Trigger: ATCAGGAACTGTTGTGGGACCTGGGGGCCGTGGGCATGCTACGCAACCTCGTCCACTCCAAACACAAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CCCGAGCTGAGACTGAAGCTGTCGTCTGATGAGGTGTaGAGGGCAGAGATGTCCTCCACCAATCTGTCGATC +
Preference number: 6 (lower is better)
Translates to: PELRLKLSSDEV*RAEMSSTNLSI
Trigger: GATCGACAGATTGGTGGAGGACATCTCTGCCCTGCACACCTCATCAGACGACAGCTTCAGTCTCAGCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp TGGGCAGTGGAGAGGCCACCAGTTTCTCAGGGACTTTaGTCAGGCTGTCTGCAGGTATCCATGCCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: WAVERPPVSQGL*SGCLQVSMPVS
Trigger: GGAAACAGGCATGGATACCTGCAGACAGCCTGAGCAAAGTCCCTGAGAAACTGGTGGCCTCTCCACTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp AGACTCAGAAGATGCTTCCAGGCTGGCTTTGGCCGCTaGCTGATGCAGCCATGTGACAATGGAGTTTGCGCC +
Preference number: 6 (lower is better)
Translates to: RLRRCFQAGFGR*LMQPCDNGVCA
Trigger: GGCGCAAACTCCATTGTCACATGGCTGCATCAGGCAGCGGCCAAAGCCAGCCTGGAAGCATCTTCTGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GGACACCAAAGACAAGAGGGAGTCAGACTCAGAAGATaGTTCCAGGCTGGCTTTGGCCGCTGCCTGATGCAG +
Preference number: 6 (lower is better)
Translates to: GHQRQEGVRLRR*FQAGFGRCLMQ
Trigger: CTGCATCAGGCAGCGGCCAAAGCCAGCCTGGAAGCATCTTCTGAGTCTGACTCCCTCTTGTCTTTGGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GTGTGGTACAAGGTCCAGAAATACCTTTGGACTGAGTaGGGGAGGCTGGGCCGGCTGAGTAGATCACTGTCC +
Preference number: 6 (lower is better)
Translates to: VWYKVQKYLWTE*GRLGRLSRSLS
Trigger: GGACAGTGATCTACTCAGCCGGCCCAGCCTCCCGCACTCAGTCCAAAGGTATTTCTGGACCTTGTACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GACAGCTTCATCACTGCACAGGTAGCCTGGCAGATCTaGGGCTCGATTGGGACAGGAGTGTCTCCTGTACCA +
Preference number: 6 (lower is better)
Translates to: DSFITAQVAWQI*GSIGTGVSPVP
Trigger: TGGTACAGGAGACACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 72 bp CTGGACATGGCCAGCAGTGTGCGCGCAGTATCTTCCTaGTCGCGCGTTGCCAACATAGATAGAAGCCAGAAC +
Preference number: 6 (lower is better)
Translates to: LDMASSVRAVSS*SRVANIDRSQN
Trigger: GTTCTGGCTTCTATCTATGTTGGCAACGCGCGACCAGGAAGATACTGCGCGCACACTGCTGGCCATGTCCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GACCAGCTTCTGCAGCACCTTGCTAGCTATGGGCAGTaGAGAGGCCACCAGTTTCTCAGGGACTTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: DQLLQHLASYGQ*RGHQFLRDFAQ
Trigger: CTGAGCAAAGTCCCTGAGAAACTGGTGGCCTCTCCACTGCCCATAGCTAGCAAGGTGCTGCAGAAGCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCAAAGGCGTCTCCTGGACGCAGTTCTCAGATGAGCTaGATGGTGTTGCATCCTCCACCCCAAGACCTCTAC +
Preference number: 6 (lower is better)
Translates to: PKASPGRSSQMS*MVLHPPPQDLY
Trigger: GTAGAGGTCTTGGGGTGGAGGATGCAACACCATCCAGCTCATCTGAGAACTGCGTCCAGGAGACGCCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GCTGGATCGGAGCCAGCCACCTCCTCCTGGCATTTCTaGGTTATCTCAGTGGGCCTTATGTCTGACCTCAAG +
Preference number: 6 (lower is better)
Translates to: AGSEPATSSWHF*VISVGLMSDLK
Trigger: CTTGAGGTCAGACATAAGGCCCACTGAGATAACCCAGAAATGCCAGGAGGAGGTGGCTGGCTCCGATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp GGCCTTTGCATGAATGGGATCCGCACAGGTGACTTCTaGGTCTTGTGTTGCTTAGCCAGAAGGGCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: GLCMNGIRTGDF*VLCCLARRARA
Trigger: AGCACGGGCCCTTCTGGCTAAGCAACACAAGACCCAGAAGTCACCTGTGCGGATCCCATTCATGCAAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp CCTGGCGCACCAGCTGCTCATATGAGGCCATGGAGCTaGTCATTTTCAACTCCTGCAGTGCCACAATCCTCC +
Preference number: 6 (lower is better)
Translates to: PGAPAAHMRPWS*SFSTPAVPQSS
Trigger: GGAGGATTGTGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140828.8
CDS CCA 72 bp CCTCCACCTGGCGCACCAGCTGCTCATATGAGGCCATaGAGCTGGTCATTTTCAACTCCTGCAGTGCCACAA +
Preference number: 6 (lower is better)
Translates to: PPPGAPAAHMRP*SWSFSTPAVPQ
Trigger: TTGTGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGAGCAGCTGGTGCGCCAGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140828.8
CDS CAA 72 bp GGATCCCTGCTCTCCAGGCTAGGTGACGTGCTAGAGTaGGTCTTAGAAGTGGCCACGTCCTCTGTTTGCACC +
Preference number: 6 (lower is better)
Translates to: GSLLSRLGDVLE*VLEVATSSVCT
Trigger: GGTGCAAACAGAGGACGTGGCCACTTCTAAGACCAACTCTAGCACGTCACCTAGCCTGGAGAGCAGGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp GGTGCCACAGGCATTGCTCACGATGGTCAAACTGTGTaGTGTGAGGTGCTGCAGCAGTGTCTGCAGGCAGTT +
Preference number: 6 (lower is better)
Translates to: GATGIAHDGQTV*CEVLQQCLQAV
Trigger: AACTGCCTGCAGACACTGCTGCAGCACCTCACATCACACAGTTTGACCATCGTGAGCAATGCCTGTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CCAGCAGTGGAACATGCTGATAGGTTGGGGATAACTTaGTTGTGCGCACTCGGGCATCGGTGGCTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: PAVEHADRLGIT*LCALGHRWLLC
Trigger: ACACAGCAGCCACCGATGCCCGAGTGCGCACAATCAAGTTATCCCCAACCTATCAGCATGTTCCACTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp TGCTCAGGGCTGGGGGCTTTGGTGACAGTTTCTGGCTaGGTGGTACCAGATGTCCCTGTCTTCTTAGGTGTG +
Preference number: 6 (lower is better)
Translates to: CSGLGALVTVSG*VVPDVPVFLGV
Trigger: CACACCTAAGAAGACAGGGACATCTGGTACCACTCAGCCAGAAACTGTCACCAAAGCCCCCAGCCCTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp GCATTGCTCACGATGGTCAAACTGTGTGATGTGAGGTaGTGCAGCAGTGTCTGCAGGCAGTTGTGGTCACGG +
Preference number: 6 (lower is better)
Translates to: ALLTMVKLCDVR*CSSVCRQLWSR
Trigger: CCGTGACCACAACTGCCTGCAGACACTGCTGCAGCACCTCACATCACACAGTTTGACCATCGTGAGCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CATGTGACAATGGAGTTTGCGCCCTCTTGGATAGCCTaGCACTCCACACTGTCTAGGTCAGAGGCTGGATCG +
Preference number: 6 (lower is better)
Translates to: HVTMEFAPSWIA*HSTLSRSEAGS
Trigger: CGATCCAGCCTCTGACCTAGACAGTGTGGAGTGGCAGGCTATCCAAGAGGGCGCAAACTCCATTGTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp TCTGATCTGCGACGCCGAAGGAGACCTGGGGATTCCTaGATGAAAGTCAGCTGTCTTCGGAAGCCTGAGCGA +
Preference number: 6 (lower is better)
Translates to: SDLRRRRRPGDS*MKVSCLRKPER
Trigger: TCGCTCAGGCTTCCGAAGACAGCTGACTTTCATCAAGGAATCCCCAGGTCTCCTTCGGCGTCGCAGATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp GCTAGAGTTGGTCTTAGAAGTGGCCACGTCCTCTGTTaGCACCACTGCGTCACTGGTCTTGCGCTGTGGAGT +
Preference number: 6 (lower is better)
Translates to: ARVGLRSGHVLC*HHCVTGLALWS
Trigger: ACTCCACAGCGCAAGACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGCCACTTCTAAGACCAACTCTAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS TCA 72 bp CTCCATGACAGATTACGCAGAATACTGGAAACAACCTaGTGCAGCTCCTCGCTCTCAGAGCCAAGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LHDRLRRILETT*CSSSLSEPSWA
Trigger: GGCCCAGCTTGGCTCTGAGAGCGAGGAGCTGCATCAGGTTGTTTCCAGTATTCTGCGTAATCTGTCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp CTAGAGTTGGTCTTAGAAGTGGCCACGTCCTCTGTTTaGACCACTGCGTCACTGGTCTTGCGCTGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LELVLEVATSSV*TTASLVLRCGV
Trigger: AACTCCACAGCGCAAGACCAGTGACGCAGTGGTGCAAACAGAGGACGTGGCCACTTCTAAGACCAACTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TTGTTGCTCAGGGCTGGGGGCTTTGGTGACAGTTTCTaGCTGAGTGGTACCAGATGTCCCTGTCTTCTTAGG +
Preference number: 6 (lower is better)
Translates to: LLLRAGGFGDSF*LSGTRCPCLLR
Trigger: CCTAAGAAGACAGGGACATCTGGTACCACTCAGCCAGAAACTGTCACCAAAGCCCCCAGCCCTGAGCAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CCA 72 bp TCGTCAAATGACAGCTTCATCACTGCACAGGTAGCCTaGCAGATCTGCGGCTCGATTGGGACAGGAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SSNDSFITAQVA*QICGSIGTGVS
Trigger: AGACACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTCATTTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS GCA 72 bp GGCCAAGCTGATACATCTCTGCAGAAGTTCCTCTTCTaGCCTTGGGCTAGGAGAGCTGTCCTGTTTACTACC +
Preference number: 6 (lower is better)
Translates to: GQADTSLQKFLF*PWARRAVLFTT
Trigger: GGTAGTAAACAGGACAGCTCTCCTAGCCCAAGGGCAGAAGAGGAACTTCTGCAGAGATGTATCAGCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS GCA 72 bp TCATATGAGGCCATGGAGCTGGTCATTTTCAACTCCTaGAGTGCCTGGTTCCCAAAGAAGGCTGAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SYEAMELVIFNS*SAWFPKKAECS
Trigger: GCTGCACTCAGCCTTCTTTGGGAACCAGGCACTGCAGGAGTTGAAAATGACCAGCTCCATGGCCTCATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105359.8
CDS CCA 72 bp TCGTCAAATGACAGCTTCATCACTGCACAGGTAGCCTaGCAGATCTGCGGCTCGATTGGGACAGGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: SSNDSFITAQVA*QICGSIGTGVS
Trigger: AGAAACTCCTGTCCCAATCGAGCCGCAGATCTGCCAGGCTACCTGTGCAGTGATGAAGCTGTCATTTGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020349.7
CDS CCA 72 bp GCTGATACATCTCTGCAGAAGTTCCTCTTCTGCCCTTaGGCTAGGAGAGCTGTCCTGTTTACTACCCTGCTC +
Preference number: 6 (lower is better)
Translates to: ADTSLQKFLFCP*ARRAVLFTTLL
Trigger: GAGCAGGGTAGTAAACAGGACAGCTCTCCTAGCCCAAGGGCAGAAGAGGAACTTCTGCAGAGATGTATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
CDS CAA 72 bp AGGACCTCCTTCATTCCAGAAGTCTCTGTCTCAAGCTaGGAGAGATGGCTAGAGTTATCCCTCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RTSFIPEVSVSS*ERWLELSLSSC
Trigger: GCAGGAGCTGAGGGATAACTCTAGCCATCTCTCCAAGCTTGAGACAGAGACTTCTGGAATGAAGGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8
ENSMUST00000138909.8
ENSMUST00000140828.8
ENSMUST00000154212.8
CDS TCA 72 bp CCTCAGCACCTTCTTGCTGTTGATGTCTGCCCTCCATaGCAGATTACGCAGAATACTGGAAACAACCTGATG +
Preference number: 6 (lower is better)
Translates to: PQHLLAVDVCPP*QITQNTGNNLM
Trigger: CATCAGGTTGTTTCCAGTATTCTGCGTAATCTGTCATGGAGGGCAGACATCAACAGCAAGAAGGTGCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020349.7
ENSMUST00000105359.8