Pregenerated sensors for APBB1IP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026786Ensembl transcript IDs: ENSMUST00000014290.15
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAGCTATGAACATAGTATaGACAACAGTGAAGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: PEYHFSEPGLQDKNVSCEAMNIV*TTVKRF Trigger: AAATCTCTTCACTGTTGTGCATACTATGTTCATAGC...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACGAGACAGGGCGGGGGTaGTGGCGGGGGTGGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNETGRG*WRGWQC Trigger: GCATTGCCACCCCCGCCACCACCCCCGCCCTGTCTC...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGGTGCCAGGGCCCTTaGCCTTGGATGGCAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNRCQGP*PWMARR Trigger: CCGCCTTGCCATCCAAGGTCAAGGGCCCTGGCACCT...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGCTTCTCGGGGTGGGTTaGGGTCTGGAGGAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LNTRKHTQNIISVNLDCKLLGVG*GLEEEE Trigger: CTCTTCCTCCTCCAGACCCCAACCCACCCCGAGAAG...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTAGTCCTCCTCAGGCGGTaGGGGCGGTGGAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YGYLNGYEHSMHNSEEILVLLRR*GRWRWQ Trigger: CTGCCACCTCCACCGCCCCCACCGCCTGAGGAGGAC...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGAGGGGCATCTGACCATTaGGCTGGCTGGTGCCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGGASDH*AGWCLF Trigger: AAACAGGCACCAGCCAGCCCAATGGTCAGATGCCCC...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGCTCCCTGGTTGCTCCTaGGGAATGGTTACCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LNTRKHTQNIISVNLDCKLPGCS*GMVTQA Trigger: GGCTTGGGTAACCATTCCCCAGGAGCAACCAGGGAG...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAATGGAGGGGGTGGCGGTaGCAGGCTGGACTTAGGACG | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCEWRGWR*QAGLRT Trigger: CGTCCTAAGTCCAGCCTGCCACCGCCACCCCCTCCA...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | TGTACATGTGGGTGTGCTTGGATATATGTAGTTAGAAACCCTGAATATGGCTACGCTGCCACAGGTGTCTaGAGACCGTCTTACTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CTCGCAWIYVVRNPEYGYAATGV*RPSYWR Trigger: CCTCCAGTAAGACGGTCTTCAGACACCTGTGGCAGC...GTAGCCATATTCAGGGTTTCTAACTACATATATCCAAGCACACCCACATGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACTTGCAGAGGAGGACCTaGAGAAGGGATGGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNLQRRT*RRDGLG Trigger: CCCCAGGCCATCCCTTCTGCAGGTCCTCCTCTGCAA...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAAGTTCTCCGGCGGGTaGGGGAAGGTGCAGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCEKFSGG*GKVQVP Trigger: TGGCACCTGCACCTTCCCCCACCCGCCGGAGAACTT...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTAAGGCGGTGGGGGTGGTaGCACGAAGTCTGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: YGYLNGYEHSMHNSEEILRRWGW*HEVWWL Trigger: GAGCCACCAGACTTCGTGCCACCACCCCCACCGCCT...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAACAGCTGCAGGCGGTaGGGGTGGTGGCACGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCENSCRR*GWWHEV Trigger: GACTTCGTGCCACCACCCCCACCGCCTGCAGCTGTT...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAGAGTCTTCAACAGCTaGAGGCGGTGGGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCERVFNS*RRWGWW Trigger: CCACCACCCCCACCGCCTGCAGCTGTTGAAGACTCT...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACTGGCGGGGGTGGCAATaGAGAGTCTTCAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNWRGWQ*RVFNSC Trigger: GCAGCTGTTGAAGACTCTGCATTGCCACCCCCGCCA...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACGACCTGCAGAAGGGATaGCCTGGGGCATCTGACCAT | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNDLQKG*PGASDH Trigger: ATGGTCAGATGCCCCAGGCCATCCCTTCTGCAGGTC...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAATCTTACTGGAGGGGGTaGCGGTGGCAGGCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCESYWRG*RWQAGL Trigger: AAGTCCAGCCTGCCACCGCCACCCCCTCCAGTAAGA...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACGGGTGGTGGCGGGGGTaGCAATGCAGAGTCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYGWWRG*QCRVFN Trigger: GTTGAAGACTCTGCATTGCCACCCCCGCCACCACCC...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTAGGGTGGGTTGGGGTCTaGAGGAGGAAGAGTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: YGYLNGYEHSMHNSEEILGWVGV*RRKSVH Trigger: GTGGACACTCTTCCTCCTCCAGACCCCAACCCACCC...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACATTGCACCGGGGAGTCCTTaGTTCTCTTGCCTCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ATLMAMNIVCTTVKRFYIAPGSP*FSCLLG Trigger: CCCCAAGAGGCAAGAGAACCAAGGACTCCCCGGTGC...AATGTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACCCCCAGTAAAGTGCTaGACATCTGGTCTATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGPPVKC*TSGLCL Trigger: AAGACATAGACCAGATGTTCAGCACTTTACTGGGGG...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACACATCCCGAGCCAACTaGCGCTCATCCACCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYTSRAN*RSSTIS Trigger: ACTGATGGTGGATGAGCGGCAGTTGGCTCGGGATGT...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAGGCAAGTCCAGCTCTTaGCACAGCCCGCTGATAGTT | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCEGKSSS*HSPLIV Trigger: AACTATCAGCGGGCTGTGGCAAGAGCTGGACTTGCC...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACCTGGACTTAGGACGGTaGTTCTCCCTGGTTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYLDLGR*FSLVAP Trigger: AGGAGCAACCAGGGAGAACCACCGTCCTAAGTCCAG...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGATTCCCATTACCCATTaGCTGAGAGTTCTTGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: LNTRKHTQNIISVNLDCKIPITH*LRVLAS Trigger: TGACGCAAGAACTCTCAGTCAATGGGTAATGGGAAT...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | GCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACATTTGTGTCTGGGCCTCTTaGAGAGGAGGACCTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ATLMAMNIVCTTVKRFYICVWAS*RGGPAE Trigger: TTCTGCAGGTCCTCCTCTGCAAGAGGCCCAGACACA...AATGTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGAGCTCCTTCAAGTTCTaGTACAATGATGGATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LNTRKHTQNIISVNLDCKSSFKF*YNDGCA Trigger: GGCACATCCATCATTGTACCAGAACTTGAAGGAGCT...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | TGTACATGTGGGTGTGCTTGGATATATGTAGTTAGAAACCCTGAATATGGCTACGTTTCAATTTGTGTCTaGGCCTCTTGCAGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CTCGCAWIYVVRNPEYGYVSICV*ASCRGG Trigger: TCCTCCTCTGCAAGAGGCCCAGACACAAATTGAAAC...GTAGCCATATTCAGGGTTTCTAACTACATATATCCAAGCACACCCACATGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACGTTGCTCCTGGGGAATaGTTACCCAAGCCTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNVAPGE*LPKPCF Trigger: AAAGCAAGGCTTGGGTAACCATTCCCCAGGAGCAAC...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAACAAGTTCTGGTACAATaGTGGATGTGCCGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCEQVLVQ*WMCRRS Trigger: GCTTCTGCGGCACATCCATCATTGTACCAGAACTTG...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACGCCTGTTTTAAGTCCTaGGGAAACTGTAGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNACFKS*GNCRRL Trigger: CAGCCTTCTACAGTTTCCTCAGGACTTAAAACAGGC...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | CATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAGCACACAGGGCTTCACTTATATCTaGTACCAGATCTGCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: HFSEPGLQDKNVSCESTQGFTYI*YQICHE Trigger: CTCATGGCAGATCTGGTAGCAGATATAAGTGAAGCC...CTGTGTGCTTTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACTCAGTGACTTGGTACTaGTGTCATCCATGTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNSVTWY*CHPCAP Trigger: AGGTGCACATGGATGACAGCAGTACCAAGTCACTGA...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGTTGACTGAGAGTTCTTaGGTCATCACAGCAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: LNTRKHTQNIISVNLDCKLTESS*VITAEI Trigger: TATCTCTGCTGTGATGACGCAAGAACTCTCAGTCAA...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GTTAGAAACCCTGAATATGGCTACCTTAATGGCTATGAACATAGTATGCACAACTCCACTCCTAAACTCTaGGTCAAGAGATCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: VRNPEYGYLNGYEHSMHNSTPKL*VKRSIS Trigger: GGAGATGGATCTCTTGACCCAGAGTTTAGGAGTGGA...GTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATATTCAGGGTTTCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAACTACCAGATCTGCCATaGGGGCATCTAAATCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCELPDLP*GHLNLG Trigger: ACCAAGATTTAGATGCCCTCATGGCAGATCTGGTAG...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | CATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAGCACACAGAAAGCTTCCTCATGGTaGCTAACATCAATAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HFSEPGLQDKNVSCESTQKASSW*LTSIAA Trigger: TGCTGCTATTGATGTTAGTCACCATGAGGAAGCTTT...CTGTGTGCTTTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | GCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACATTCTCATCCACCATCAGTaGCTTGGTACTGCTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: ATLMAMNIVCTTVKRFYILIHHQ*LGTAVI Trigger: GATGACAGCAGTACCAAGTCACTGATGGTGGATGAG...AATGTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACCCATTACCCATTGACTaGGAGTTCTTGCGTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYPLPID*EFLRHH Trigger: GTGATGACGCAAGAACTCTCAGTCAATGGGTAATGG...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGATGCTTTCATGAGGTCTaGCATAAAATCTTGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGCFHEV*HKILLT Trigger: AGTGAGCAAGATTTTATGTCAGACCTCATGAAAGCA...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGGCAGTGGTCAGTGGGTaGTTTGTATTTCATTTTACA | + |
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Preference number: 4 (lower is better) Translates to: LNTRKHTQNIISVNLDCKAVVSG*FVFHFT Trigger: TGTAAAATGAAATACAAAGCACCCACTGACCACTGC...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACCACCATCAGTGACTTaGTACTGCTGTCATCCATGT | + |
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Preference number: 4 (lower is better) Translates to: YGYLNGYEHSMHNSEEILPPSVT*YCCHPC Trigger: ACATGGATGACAGCAGTACCAAGTCACTGATGGTGG...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR TCA 90 bp | TGTACATGTGGGTGTGCTTGGATATATGTAGTTAGAAACCCTGAATATGGCTACCACAGCAGAGATACTTaGTATATTGAGATTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CTCGCAWIYVVRNPEYGYHSRDT*YIEIPS Trigger: AGAAGGAATCTCAATATATCAAGTATCTCTGCTGTG...GTAGCCATATTCAGGGTTTCTAACTACATATATCCAAGCACACCCACATGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACGAAGCCCTCAGAAGTaGAAAACGATCTTGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: YGYLNGYEHSMHNSEEILRSPQK*KTILIL Trigger: CAGAATCAAGATCGTTTTGCACTTCTGAGGGCTTCG...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGAAATTTTATCAGCCTTTaGTTTGGCTTCTTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGNFISL*FGFFFF Trigger: GAAGAAGAAGAAGCCAAAGCAAAGGCTGATAAAATT...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACTGGTTACCCAAGCCTTaGTTTTCATCCTTAGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYWLPKP*FSSLVV Trigger: AACGACTAAGGATGAAAAGCAAGGCTTGGGTAACCA...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACTCTGACATAAAATCTTaGTCACTGTTCCCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYSDIKS*SLFPGA Trigger: TGCACCAGGGAACAGTGAGCAAGATTTTATGTCAGA...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR GCA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACAAACTGTATAAAACATaGCAGATCGCGGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MATLMAMNIVCTTVKRFYKLYKT*QIAGCL Trigger: AAGACATCCCGCGATCTGGCATGTTTTATACAGTTT...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAGGGCATCTAAATCTTaGTCTTCCAGTGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEYHFSEPGLQDKNVSCERASKS*SSSAFK Trigger: CTTAAATGCACTGGAAGACCAAGATTTAGATGCCCT...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | GCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACATTTTTAAAACAAAGCAGTaGTCAGTGGGTGCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ATLMAMNIVCTTVKRFYIFKTKQ*SVGALY Trigger: ATACAAAGCACCCACTGACCACTGCTTTGTTTTAAA...AATGTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CCA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTAAAAGTGCTGAACATCTaGTCTATGTCTTCATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YGYLNGYEHSMHNSEEILKVLNI*SMSSFD Trigger: ATCAAATGAAGACATAGACCAGATGTTCAGCACTTT...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 90 bp | TCAGGCGGTGGGGGCGGTGGAGGTGGCAGGAAGTTCTCCGGCGGGTaGGGGAAGGTGCAGGTGCCAGGGCCCTTGACCTTGGATGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGGGGGGGGRKFSGG*GKVQVPGPLTLDGK Trigger: CTTGCCATCCAAGGTCAAGGGCCCTGGCACCTGCACCTTCCCCCACCCGCCGGAGAACTTCCTGCCACCTCCACCGCCCCCACCGCCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 90 bp | GGAAGTTCTCCGGCGGGTGGGGGAAGGTGCAGGTGCCAGGGCCCTTaGCCTTGGATGGCAAGGCGGGGCTGCCACAGGTGTCTGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPAGGGRCRCQGP*PWMARRGCHRCLKT Trigger: GGTCTTCAGACACCTGTGGCAGCCCCGCCTTGCCATCCAAGGTCAAGGGCCCTGGCACCTGCACCTTCCCCCACCCGCCGGAGAACTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 90 bp | TGGTGGCGGGGGTGGCAATGCAGAGTCTTCAACAGCTGCAGGCGGTaGGGGTGGTGGCACGAAGTCTGGTGGCTCCTCCAGGTAGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WWRGWQCRVFNSCRR*GWWHEVWWLLQVGR Trigger: CCGCCCTACCTGGAGGAGCCACCAGACTTCGTGCCACCACCCCCACCGCCTGCAGCTGTTGAAGACTCTGCATTGCCACCCCCGCCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 90 bp | TTACCCAAGCCTTGCTTTTCATCCTTAGTCGTTTCAATTTGTGTCTaGGCCTCTTGCAGAGGAGGACCTGCAGAAGGGATGGCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPKPCFSSLVVSICV*ASCRGGPAEGMAWG Trigger: GCCCCAGGCCATCCCTTCTGCAGGTCCTCCTCTGCAAGAGGCCCAGACACAAATTGAAACGACTAAGGATGAAAAGCAAGGCTTGGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS GCA 90 bp | ACCAACAGTCCCCAGGTTTGTCCACCGAGAGGCAAGTCCAGCTCTTaGCACAGCCCGCTGATAGTTATCATAGAGAGTCTTCCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: TNSPQVCPPRGKSSS*HSPLIVIIESLPIL Trigger: AAGTATGGGAAGACTCTCTATGATAACTATCAGCGGGCTGTGGCAAGAGCTGGACTTGCCTCTCGGTGGACAAACCTGGGGACTGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | TGTACATGTGGGTGTGCTTGGATATATGTAGTTAGAAACCCTGAATATGGCTACCCAGGGCCCTTGACCTaGGATGGCAAGGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTCGCAWIYVVRNPEYGYPGPLT*DGKAGL Trigger: CAGCCCCGCCTTGCCATCCAAGGTCAAGGGCCCTGG...GTAGCCATATTCAGGGTTTCTAACTACATATATCCAAGCACACCCACATGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 90 bp | GTTGTCCAGAACATCCCGAGCCAACTGCCGCTCATCCACCATCAGTaGCTTGGTACTGCTGTCATCCATGTGCACCTTAACTACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVQNIPSQLPLIHHQ*LGTAVIHVHLNYKL Trigger: AAGCTTGTAGTTAAGGTGCACATGGATGACAGCAGTACCAAGTCACTGATGGTGGATGAGCGGCAGTTGGCTCGGGATGTTCTGGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGTCTTCTCGGGGTGGGTaGGGGTCTGGAGGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LNTRKHTQNIISVNLDCKSSRGG*GSGGGR Trigger: TCTTCCTCCTCCAGACCCCAACCCACCCCGAGAAGA...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | ATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACCAGGTGCCAGGGCCCTaGACCTTGGATGGCAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MATLMAMNIVCTTVKRFYQVPGP*TLDGKA Trigger: CGCCTTGCCATCCAAGGTCAAGGGCCCTGGCACCTG...GTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | TGTACATGTGGGTGTGCTTGGATATATGTAGTTAGAAACCCTGAATATGGCTACTGCACCGGGGAGTCCTaGGTTCTCTTGCCTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTCGCAWIYVVRNPEYGYCTGES*VLLPLG Trigger: CCCAAGAGGCAAGAGAACCAAGGACTCCCCGGTGCA...GTAGCCATATTCAGGGTTTCTAACTACATATATCCAAGCACACCCACATGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | TGTACATGTGGGTGTGCTTGGATATATGTAGTTAGAAACCCTGAATATGGCTACGGTGGTTCTCCCTGGTaGCTCCTGGGGAATGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CTCGCAWIYVVRNPEYGYGGSPW*LLGNGY Trigger: GTAACCATTCCCCAGGAGCAACCAGGGAGAACCACC...GTAGCCATATTCAGGGTTTCTAACTACATATATCCAAGCACACCCACATGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGATCCACCATCAGTGACTaGGTACTGCTGTCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGSTISD*VLLSSM Trigger: CATGGATGACAGCAGTACCAAGTCACTGATGGTGGA...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | CCAGAATATCATTTCAGTGAACCTGGACTGCAAGACAAAAATGTATCATGTGAAAGGCAAGTCCAGCTCTaGCCACAGCCCGCTGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PEYHFSEPGLQDKNVSCERQVQL*PQPADS Trigger: ACTATCAGCGGGCTGTGGCAAGAGCTGGACTTGCCT...TTCACATGATACATTTTTGTCTTGCAGTCCAGGTTCACTGAAATGATATTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGAAGGCACCAGTCCACATaGCAGTCACAATGGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGRHQST*QSQWVF Trigger: AAAAACCCATTGTGACTGCAATGTGGACTGGTGCCT...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACAACAGTCCCCAGGTTaGTCCACCGAGAGGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YGYLNGYEHSMHNSEEILQQSPG*STERQV Trigger: GACTTGCCTCTCGGTGGACAAACCTGGGGACTGTTG...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | GCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTACATTTTGTGTCTGGGCCTCTaGCAGAGGAGGACCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATLMAMNIVCTTVKRFYILCLGL*QRRTCR Trigger: TCTGCAGGTCCTCCTCTGCAAGAGGCCCAGACACAA...AATGTAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | GAGCCTTCTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGAACAAGCTTCTTAACCTaGGCTTCCTTCAGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPSEHTKTYPEYHFSEPGTSFLT*ASFSFS Trigger: GGAAAAGCTGAAGGAAGCCAAGGTTAAGAAGCTTGT...TCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAGAAGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | CTGAACACACGAAAACATACCCAGAATATCATTTCAGTGAACCTGGACTGCAAGTGTTCTCTGTGTCTCTaGTCCAGTCTGATAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LNTRKHTQNIISVNLDCKCSLCL*SSLIRL Trigger: AAGTCTTATCAGACTGGACAAGAGACACAGAGAACA...CTTGCAGTCCAGGTTCACTGAAATGATATTCTGGGTATGTTTTCGTGTGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 90 bp | TCACTTATATCTGCTACCAGATCTGCCATGAGGGCATCTAAATCTTaGTCTTCCAGTGCATTTAAGGACTCATTTAAATCCTTAAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLISATRSAMRASKS*SSSAFKDSFKSLNP Trigger: GGGGTTTAAGGATTTAAATGAGTCCTTAAATGCACTGGAAGACCAAGATTTAGATGCCCTCATGGCAGATCTGGTAGCAGATATAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS-3UTR CAA 90 bp | TATGGCTACCTTAATGGCTATGAACATAGTATGCACAACAGTGAAGAGATTTTAGATCGCGGGATGTCTTaGTCTTTCCTTTGGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: YGYLNGYEHSMHNSEEILDRGMS*SFLWEH Trigger: ATGTTCCCAAAGGAAAGACAAAGACATCCCGCGATC...TAAAATCTCTTCACTGTTGTGCATACTATGTTCATAGCCATTAAGGTAGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 90 bp | TTCCATCTTCTTTCAAATAAAGAGCTCCTTCAAGTTCTGGTACAATaGTGGATGTGCCGCAGAAGCTTTCCTCAAGTAAGTATTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FHLLSNKELLQVLVQ*WMCRRSFPQVSILC Trigger: ACAAAGAATACTTACTTGAGGAAAGCTTCTGCGGCACATCCATCATTGTACCAGAACTTGAAGGAGCTCTTTATTTGAAAGAAGATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 90 bp | TCTGTGTCTCTTGTCCAGTCTGATAAGACTTCAACAACATTTTCATaGTCTTCAAAAACTCTCTCAATTTGCAGTTCGGGATATATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSLVQSDKTSTTFS*SSKTLSICSSGYIS Trigger: TGAAATATATCCCGAACTGCAAATTGAGAGAGTTTTTGAAGACCATGAAAATGTTGTTGAAGTCTTATCAGACTGGACAAGAGACACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 90 bp | ATTCCTTCTGAATTTGAGGATGCTTTAAAACAAAGCAGTGGTCAGTaGGTGCTTTGTATTTCATTTTACACTGAATCCCATAGTAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: IPSEFEDALKQSSGQ*VLCISFYTESHSKC Trigger: ACATTTACTATGGGATTCAGTGTAAAATGAAATACAAAGCACCCACTGACCACTGCTTTGTTTTAAAGCATCCTCAAATTCAGAAGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 90 bp | TTCTCCGGCGGGTGGGGGAAGGTGCAGGTGCCAGGGCCCTTGACCTaGGATGGCAAGGCGGGGCTGCCACAGGTGTCTGAAGACCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FSGGWGKVQVPGPLT*DGKAGLPQVSEDRL Trigger: AAGACGGTCTTCAGACACCTGTGGCAGCCCCGCCTTGCCATCCAAGGTCAAGGGCCCTGGCACCTGCACCTTCCCCCACCCGCCGGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 72 bp | GACCTTGGATGGCAAGGCGGGGCTGCCACAGGTGTCTaGAGACCGTCTTACTGGAGGGGGTGGCGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLGWQGGAATGV*RPSYWRGWRWQ Trigger: CTGCCACCGCCACCCCCTCCAGTAAGACGGTCTTCAGACACCTGTGGCAGCCCCGCCTTGCCATCCAAGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | GGAGGGGGTGGCGGTGGCAGGCTGGACTTAGGACGGTaGTTCTCCCTGGTTGCTCCTGGGGAATGGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGGGGRLDLGR*FSLVAPGEWLP Trigger: GGGTAACCATTCCCCAGGAGCAACCAGGGAGAACCACCGTCCTAAGTCCAGCCTGCCACCGCCACCCCCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | GGGTGGCAATGCAGAGTCTTCAACAGCTGCAGGCGGTaGGGGTGGTGGCACGAAGTCTGGTGGCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GWQCRVFNSCRR*GWWHEVWWLLQ Trigger: CTGGAGGAGCCACCAGACTTCGTGCCACCACCCCCACCGCCTGCAGCTGTTGAAGACTCTGCATTGCCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | CAATGCAGAGTCTTCAACAGCTGCAGGCGGTGGGGGTaGTGGCACGAAGTCTGGTGGCTCCTCCAGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QCRVFNSCRRWG*WHEVWWLLQVG Trigger: CCCTACCTGGAGGAGCCACCAGACTTCGTGCCACCACCCCCACCGCCTGCAGCTGTTGAAGACTCTGCATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | GCTGAGCTGGCATCGGTGTACCAACAGTCCCCAGGTTaGTCCACCGAGAGGCAAGTCCAGCTCTTGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: AELASVYQQSPG*STERQVQLLPQ Trigger: CTGTGGCAAGAGCTGGACTTGCCTCTCGGTGGACAAACCTGGGGACTGTTGGTACACCGATGCCAGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | GAGGAGGAGGAGGAGGAGGAGGCAGAAGGTCTAGCATaGGTTCTACGGGTGGAGGTGGTAAAGCTTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EEEEEEEAEGLA*VLRVEVVKLPH Trigger: ATGAGGAAGCTTTACCACCTCCACCCGTAGAACCCATGCTAGACCTTCTGCCTCCTCCTCCTCCTCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS GCA 72 bp | CCCCAGGTTTGTCCACCGAGAGGCAAGTCCAGCTCTTaGCACAGCCCGCTGATAGTTATCATAGAGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PQVCPPRGKSSS*HSPLIVIIESL Trigger: AAGACTCTCTATGATAACTATCAGCGGGCTGTGGCAAGAGCTGGACTTGCCTCTCGGTGGACAAACCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | TCCCCAGGTTTGTCCACCGAGAGGCAAGTCCAGCTCTaGCCACAGCCCGCTGATAGTTATCATAGAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGLSTERQVQL*PQPADSYHRES Trigger: AGACTCTCTATGATAACTATCAGCGGGCTGTGGCAAGAGCTGGACTTGCCTCTCGGTGGACAAACCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | TTCATCCTTAGTCGTTTCAATTTGTGTCTGGGCCTCTaGCAGAGGAGGACCTGCAGAAGGGATGGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FILSRFNLCLGL*QRRTCRRDGLG Trigger: CCCCAGGCCATCCCTTCTGCAGGTCCTCCTCTGCAAGAGGCCCAGACACAAATTGAAACGACTAAGGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 72 bp | AACATCCCGAGCCAACTGCCGCTCATCCACCATCAGTaGCTTGGTACTGCTGTCATCCATGTGCACCTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: NIPSQLPLIHHQ*LGTAVIHVHLN Trigger: GTTAAGGTGCACATGGATGACAGCAGTACCAAGTCACTGATGGTGGATGAGCGGCAGTTGGCTCGGGATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | TCCCGAGCCAACTGCCGCTCATCCACCATCAGTGACTaGGTACTGCTGTCATCCATGTGCACCTTAACTACA | + |
|
Preference number: 6 (lower is better) Translates to: SRANCRSSTISD*VLLSSMCTLTT Trigger: TGTAGTTAAGGTGCACATGGATGACAGCAGTACCAAGTCACTGATGGTGGATGAGCGGCAGTTGGCTCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 90 bp | GGCTGTACCCTGGCCATCCGAAGCCCTCAGAAGTGCAAAACGATCTaGATTCTGAGAGGACTCTTTCTGAGCCTGGATGGTTCTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCTLAIRSPQKCKTI*ILRGLFLSLDGSLF Trigger: GAACAGAGAACCATCCAGGCTCAGAAAGAGTCCTCTCAGAATCAAGATCGTTTTGCACTTCTGAGGGCTTCGGATGGCCAGGGTACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 90 bp | TACCAACAGTCCCCAGGTTTGTCCACCGAGAGGCAAGTCCAGCTCTaGCCACAGCCCGCTGATAGTTATCATAGAGAGTCTTCCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: YQQSPGLSTERQVQL*PQPADSYHRESSHT Trigger: AGTATGGGAAGACTCTCTATGATAACTATCAGCGGGCTGTGGCAAGAGCTGGACTTGCCTCTCGGTGGACAAACCTGGGGACTGTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 72 bp | GTGCCTGTTTTAAGTCCTGAGGAAACTGTAGAAGGCTaGGCTGGCATCGGTGTACCAACAGTCCCCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VPVLSPEETVEG*AGIGVPTVPRF Trigger: AAACCTGGGGACTGTTGGTACACCGATGCCAGCTCAGCCTTCTACAGTTTCCTCAGGACTTAAAACAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | TTAGGACGGTGGTTCTCCCTGGTTGCTCCTGGGGAATaGTTACCCAAGCCTTGCTTTTCATCCTTAGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGRWFSLVAPGE*LPKPCFSSLVV Trigger: AACGACTAAGGATGAAAAGCAAGGCTTGGGTAACCATTCCCCAGGAGCAACCAGGGAGAACCACCGTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | CTGGCCATCCGAAGCCCTCAGAAGTGCAAAACGATCTaGATTCTGAGAGGACTCTTTCTGAGCCTGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LAIRSPQKCKTI*ILRGLFLSLDG Trigger: ACCATCCAGGCTCAGAAAGAGTCCTCTCAGAATCAAGATCGTTTTGCACTTCTGAGGGCTTCGGATGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
||
| CDS CAA 90 bp | TCCAGAACATCCCGAGCCAACTGCCGCTCATCCACCATCAGTGACTaGGTACTGCTGTCATCCATGTGCACCTTAACTACAAGCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRTSRANCRSSTISD*VLLSSMCTLTTSFL Trigger: TAAGAAGCTTGTAGTTAAGGTGCACATGGATGACAGCAGTACCAAGTCACTGATGGTGGATGAGCGGCAGTTGGCTCGGGATGTTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
||
| CDS GCA 72 bp | TTTTCAAAAAGGTTGTCCAGAACATCCCGAGCCAACTaGCGCTCATCCACCATCAGTGACTTGGTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSKRLSRTSRAN*RSSTISDLVLL Trigger: CAGCAGTACCAAGTCACTGATGGTGGATGAGCGGCAGTTGGCTCGGGATGTTCTGGACAACCTTTTTGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | CCTTGCTTTTCATCCTTAGTCGTTTCAATTTGTGTCTaGGCCTCTTGCAGAGGAGGACCTGCAGAAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: PCFSSLVVSICV*ASCRGGPAEGM Trigger: CATCCCTTCTGCAGGTCCTCCTCTGCAAGAGGCCCAGACACAAATTGAAACGACTAAGGATGAAAAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS GCA 72 bp | TCCCTGGTTGCTCCTGGGGAATGGTTACCCAAGCCTTaGTTTTCATCCTTAGTCGTTTCAATTTGTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLVAPGEWLPKP*FSSLVVSICVW Trigger: CCAGACACAAATTGAAACGACTAAGGATGAAAAGCAAGGCTTGGGTAACCATTCCCCAGGAGCAACCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | CTCCCTGGTTGCTCCTGGGGAATGGTTACCCAAGCCTaGCTTTTCATCCTTAGTCGTTTCAATTTGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPGCSWGMVTQA*LFILSRFNLCL Trigger: CAGACACAAATTGAAACGACTAAGGATGAAAAGCAAGGCTTGGGTAACCATTCCCCAGGAGCAACCAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS GCA 72 bp | TCCACCATCAGTGACTTGGTACTGCTGTCATCCATGTaGACCTTAACTACAAGCTTCTTAACCTTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: STISDLVLLSSM*TLTTSFLTLAS Trigger: GGAAGCCAAGGTTAAGAAGCTTGTAGTTAAGGTGCACATGGATGACAGCAGTACCAAGTCACTGATGGTGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 72 bp | TTCCCATACTTGGCGATCCTTATTCCCATTACCCATTaGCTGAGAGTTCTTGCGTCATCACAGCAGAGATAC | + |
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Preference number: 6 (lower is better) Translates to: FPYLAILIPITH*LRVLASSQQRY Trigger: GTATCTCTGCTGTGATGACGCAAGAACTCTCAGTCAATGGGTAATGGGAATAAGGATCGCCAAGTATGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | CTTCCCATACTTGGCGATCCTTATTCCCATTACCCATaGACTGAGAGTTCTTGCGTCATCACAGCAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: LPILGDPYSHYP*TESSCVITAEI Trigger: TATCTCTGCTGTGATGACGCAAGAACTCTCAGTCAATGGGTAATGGGAATAAGGATCGCCAAGTATGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS TCA 72 bp | GTTCGGCTTCACTTATATCTGCTACCAGATCTGCCATaGGGGCATCTAAATCTTGGTCTTCCAGTGCATTTA | + |
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Preference number: 6 (lower is better) Translates to: VRLHLYLLPDLP*GHLNLGLPVHL Trigger: TAAATGCACTGGAAGACCAAGATTTAGATGCCCTCATGGCAGATCTGGTAGCAGATATAAGTGAAGCCGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | TCTGCTACCAGATCTGCCATGAGGGCATCTAAATCTTaGTCTTCCAGTGCATTTAAGGACTCATTTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: SATRSAMRASKS*SSSAFKDSFKS Trigger: GGATTTAAATGAGTCCTTAAATGCACTGGAAGACCAAGATTTAGATGCCCTCATGGCAGATCTGGTAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CCA 72 bp | TCCATCTTCTTTCAAATAAAGAGCTCCTTCAAGTTCTaGTACAATGATGGATGTGCCGCAGAAGCTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SIFFQIKSSFKF*YNDGCAAEAFL Trigger: GAGGAAAGCTTCTGCGGCACATCCATCATTGTACCAGAACTTGAAGGAGCTCTTTATTTGAAAGAAGATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 90 bp | GTACTGCTGTCATCCATGTGCACCTTAACTACAAGCTTCTTAACCTaGGCTTCCTTCAGCTTTTCCAGTGCTAACTTAATTTTATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VLLSSMCTLTTSFLT*ASFSFSSANLILSA Trigger: GGCTGATAAAATTAAGTTAGCACTGGAAAAGCTGAAGGAAGCCAAGGTTAAGAAGCTTGTAGTTAAGGTGCACATGGATGACAGCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 90 bp | ATAGAGAGTCTTCCCATACTTGGCGATCCTTATTCCCATTACCCATaGACTGAGAGTTCTTGCGTCATCACAGCAGAGATACTTGATATA | + |
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Preference number: 6 (lower is better) Translates to: IESLPILGDPYSHYP*TESSCVITAEILDI Trigger: TATATCAAGTATCTCTGCTGTGATGACGCAAGAACTCTCAGTCAATGGGTAATGGGAATAAGGATCGCCAAGTATGGGAAGACTCTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | TCATCCATGTGCACCTTAACTACAAGCTTCTTAACCTaGGCTTCCTTCAGCTTTTCCAGTGCTAACTTAATT | + |
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Preference number: 6 (lower is better) Translates to: SSMCTLTTSFLT*ASFSFSSANLI Trigger: AATTAAGTTAGCACTGGAAAAGCTGAAGGAAGCCAAGGTTAAGAAGCTTGTAGTTAAGGTGCACATGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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| CDS CAA 72 bp | CTTTCTCCAAAAACAGTACTTTGTTCTCTGTGTCTCTaGTCCAGTCTGATAAGACTTCAACAACATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSPKTVLCSLCL*SSLIRLQQHFH Trigger: ATGAAAATGTTGTTGAAGTCTTATCAGACTGGACAAGAGACACAGAGAACAAAGTACTGTTTTTGGAGAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014290.15 |
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