RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APBB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037032

Ensembl transcript IDs: ENSMUST00000081165.14, ENSMUST00000186814.2, ENSMUST00000186868.2, ENSMUST00000187051.7, ENSMUST00000187057.7, ENSMUST00000187683.7, ENSMUST00000187721.8, ENSMUST00000188001.7, ENSMUST00000188368.7, ENSMUST00000188440.7, ENSMUST00000188726.2, ENSMUST00000189072.7, ENSMUST00000189265.7, ENSMUST00000189378.7, ENSMUST00000190369.7, ENSMUST00000191011.7, ENSMUST00000191601.7, ENSMUST00000210079.2, ENSMUST00000211614.2

Found 629 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAGAAGGAGGCTGGGCCGGCAGCCATGATGAACGCGAATGTGTaGACATCTCTGCCCACAGCCAGGAAGGAGAGAAACCGCACCCGG +
Preference number: 1 (lower is better)
Translates to: QQKEAGPAAMMNANV*TSLPTARKERNRTR
Trigger: CCGGGTGCGGTTTCTCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACATTCGCGTTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR TCA 90 bp TCCGTTGGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCTGGGCTaGGGCTCTGAGCTGGGAAGGACAATGTCGCCTCCTCGGGGTCCT +
Preference number: 1 (lower is better)
Translates to: SVGTASLPPGELVLG*GSELGRTMSPPRGP
Trigger: AGGACCCCGAGGAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR TCA 90 bp GTCTGGGATCCCAGACGTTTGGGCTTGAGGGAACCCCACAGCGACTaGACACCCCTGCGGACTGTCCACCCTACACGTCTTGCAACTGAC +
Preference number: 1 (lower is better)
Translates to: VWDPRRLGLREPHSD*TPLRTVHPTRLATD
Trigger: GTCAGTTGCAAGACGTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 90 bp CTTCTCTTCCTCCTGGGGAACTGGTTCTGGGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTCCTCGGGGTCCTTCAGTCCCAACTC +
Preference number: 1 (lower is better)
Translates to: LLFLLGNWFWAEALS*EGQCRLLGVLQSQL
Trigger: GAGTTGGGACTGAAGGACCCCGAGGAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 90 bp TGGGTTGGCATTCCGTTGGGACAGCTTCTCTTCCTCCTGGGGAACTaGTTCTGGGCTGAGGCTCTGAGCTGGGAAGGACAATGTCGCCTC +
Preference number: 1 (lower is better)
Translates to: WVGIPLGQLLFLLGN*FWAEALSWEGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 90 bp AGGGAGCGCACAGCGAAACACTTGATCCCTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCTGGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: RERTAKHLIPGLAFR*DSFSSSWGTGSGLR
Trigger: CCTCAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 90 bp TACAGGGTTTGGCCCTGGTGTTCTGTAGGTTCTGCCTTAAGGAGCTaGGGCGGACAGAGAGGCAAGCATGCTGAGGTGGGGGACAATGCC +
Preference number: 1 (lower is better)
Translates to: YRVWPWCSVGSALRS*GGQRGKHAEVGDNA
Trigger: GGCATTGTCCCCCACCTCAGCATGCTTGCCTCTCTGTCCGCCCCAGCTCCTTAAGGCAGAACCTACAGAACACCAGGGCCAAACCCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR CCA 90 bp GGCAGCATTGGGCTCACACCAAAACATGTGACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAACGCGAATGTGTGCACATCTCTGCC +
Preference number: 1 (lower is better)
Translates to: GSIGLTPKHVTAEGG*AGSHDERECVHISA
Trigger: GGCAGAGATGTGCACACATTCGCGTTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGAGCCCAATGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR TCA 90 bp GACGTGACTTGGAGTCCACTGCTCACGGCTACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGC +
Preference number: 1 (lower is better)
Translates to: DVTWSPLLTATGRQD*LQGPINHVYPNRFS
Trigger: GCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAGTCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR TCA 90 bp CAGACACTTCTGGTAGCGGAGCATGCATGCAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGGCTCACACCAAAACATGTGACAGCA +
Preference number: 1 (lower is better)
Translates to: QTLLVAEHACSLHSL*ETGSIGLTPKHVTA
Trigger: TGCTGTCACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGAAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR TCA 90 bp CATGTAGATTGTTTTTGTGGTAGGAGAGCTGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTCCTGGGGCCAGCTCCTCCTCGGTCA +
Preference number: 1 (lower is better)
Translates to: HVDCFCGRRAGGYNC*LPHCCVLGPAPPRS
Trigger: TGACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCTCTCCTACCACAAAAACAATCTACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 90 bp GGTGCTGGGAATTCCACTTGGAAAGGGACATCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATTGCGCCGT +
Preference number: 1 (lower is better)
Translates to: GAGNSTWKGTSTSLE*SRESPLTKQRALRR
Trigger: ACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR CCA 90 bp GCATCTGGGTCAGCTTATCTCGAGCTACGTAGGCAAAGTCCCTGTTaGGGGAGGGTCACCTCAGTGTCTCCTAGAACCATCAAATGCCAT +
Preference number: 1 (lower is better)
Translates to: ASGSAYLELRRQSPC*GRVTSVSPRTIKCH
Trigger: ATGGCATTTGATGGTTCTAGGAGACACTGAGGTGACCCTCCCCCAACAGGGACTTTGCCTACGTAGCTCGAGATAAGCTGACCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR GCA 90 bp TTGCTCTACCTCAAACACTGGGGATGGAGAGCCCAAGGCTGGCTTTaGTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTGT +
Preference number: 1 (lower is better)
Translates to: LLYLKHWGWRAQGWL*FWPLMSSVQCNDFC
Trigger: ACAGAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCCAGTGTTTGAGGTAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CCA 90 bp TACCTCAAACACTGGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTaGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGA +
Preference number: 1 (lower is better)
Translates to: YLKHWGWRAQGWLCF*PLMSSVQCNDFCEG
Trigger: TCCTTCACAGAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCCAGTGTTTGAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGGGAACCCCAGCTACTaGGGAAGGGCAGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSGNPSY*GRAAQG
Trigger: CCCCTGGGCTGCCCTTCCTCAGTAGCTGGGGTTCCC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR TCA 90 bp GAACGCGAATGTGTGCACATCTCTGCCCACAGCCAGGAAGGAGAGAAACCGCACCCCCTGCTGGGCCTTTaGGGATGGGGCCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: ERECVHISAHSQEGEKPHPLLGL*GWGLAW
Trigger: CCAAGCCAGGCCCCATCCTCAAAGGCCCAGCAGGGG...GTGCGGTTTCTCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACATTCGCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGGGAACCCCAGCTACTaGGGAAGGGCAGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHGNPSY*GRAAQG
Trigger: CCCCTGGGCTGCCCTTCCTCAGTAGCTGGGGTTCCC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCCCCTGCTGGGCCTTTaGGGATGGGGCCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHPLLGL*GWGLAW
Trigger: CCAAGCCAGGCCCCATCCTCAAAGGCCCAGCAGGGG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR TCA 90 bp ACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCATGCGGGAACCCCAGCTACTaGGGAAGGGCAGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: TKQRALRRSDMILEQISCGNPSY*GRAAQG
Trigger: CCCCTGGGCTGCCCTTCCTCAGTAGCTGGGGTTCCC...GCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR TCA 90 bp CACCCGGCACTCCCCCAGCACCGCTTCTGTCTGCTGGTGCAAGATGGTGAGGGTACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAAT +
Preference number: 2 (lower is better)
Translates to: HPALPQHRFCLLVQDGEGTGRQD*LQGPIN
Trigger: ATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGT...ACCCTCACCATCTTGCACCAGCAGACAGAAGCGGTGCTGGGGGAGTGCCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTCCACAGCCCCTACCTaGCCCAAACCCTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSTAPT*PKPLSS
Trigger: GGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR GCA 90 bp CTTGGAGTCCACTGCTCACGGCTACTGGAAGACAGGACTGACTCCAGGGCCCCATCCACAGCCCCTACCTaGCCCAAACCCTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: LGVHCSRLLEDRTDSRAPSTAPT*PKPLSS
Trigger: GGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGA...TGGGGCCCTGGAGTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp ACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCAACTGGCGCCCAGCACAGCGGGTaGGGAAGGGACAGGGCACAC +
Preference number: 2 (lower is better)
Translates to: TDSRAPLITSTPTGLATGAQHSG*GRDRAH
Trigger: GTGTGCCCTGTCCCTTCCCCACCCGCTGTGCTGGGC...GCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGGGAACCCCAGCTACTaGGGAAGGGCAGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFGNPSY*GRAAQG
Trigger: CCCCTGGGCTGCCCTTCCTCAGTAGCTGGGGTTCCC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR TCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCCCTGCTGGGCCTTTaGGGATGGGGCCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: FISDISTAEVPAEQGRGDPLLGL*GWGLAW
Trigger: CCAAGCCAGGCCCCATCCTCAAAGGCCCAGCAGGGG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR GCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCCACAGCCCCTACCTaGCCCAAACCCTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: GMESPRLALLLAPHVISPSTAPT*PKPLSS
Trigger: GGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR CCA 90 bp GAACGCGAATGTGTGCACATCTCTGCCCACAGCCAGGAAGGAGAGAAACCGCACTGGAGAGCCCAAGGCTaGCTTTGCTTCTGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: ERECVHISAHSQEGEKPHWRAQG*LCFWPL
Trigger: GAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCA...GTGCGGTTTCTCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACATTCGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 2 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp TCTTCATGGGGTCTGGGATCCCAGACGTTTGGGCTTGAGGGAACCCCACAGCGAGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 2 (lower is better)
Translates to: SSWGLGSQTFGLEGTPQRACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...TCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCATGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp CACCCGGCACTCCCCCAGCACCGCTTCTGTCTGCTGGTGCAAGATGGTGAGGGTTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 2 (lower is better)
Translates to: HPALPQHRFCLLVQDGEGWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...ACCCTCACCATCTTGCACCAGCAGACAGAAGCGGTGCTGGGGGAGTGCCGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp CTTGGAGTCCACTGCTCACGGCTACTGGAAGACAGGACTGACTCCAGGGCCCCATACAGGGTTTGGCCCTaGTGTTCTGTAGGTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LGVHCSRLLEDRTDSRAPYRVWP*CSVGSA
Trigger: GGCAGAACCTACAGAACACCAGGGCCAAACCCTGTA...TGGGGCCCTGGAGTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR TCA 90 bp GAACGCGAATGTGTGCACATCTCTGCCCACAGCCAGGAAGGAGAGAAACCGCACGCACAGCGAAACACTTaGTCCCTGGGTTGGCATTCC +
Preference number: 2 (lower is better)
Translates to: ERECVHISAHSQEGEKPHAQRNT*SLGWHS
Trigger: GGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGC...GTGCGGTTTCTCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACATTCGCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR GCA 90 bp GACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCATCAGTACAGCGGAGGTaGCCGCAGAACAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: DRTDSRAPLITSTPTGLASVQRR*PQNRGE
Trigger: CTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGA...TGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR TCA 90 bp GCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCATGCAGGCTGGTGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 2 (lower is better)
Translates to: ASIAPFRHDLGADLMQAGGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...ACCAGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR GCA 90 bp ACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCATGCAACCATCAAATGCCATaGCTGGCCACCGTCCCACCC +
Preference number: 2 (lower is better)
Translates to: TKQRALRRSDMILEQISCNHQMP*LATVPP
Trigger: GGGTGGGACGGTGGCCAGGCATGGCATTTGATGGTT...GCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTGGAGAGCCCAAGGCTaGCTTTGCTTCTGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: FISDISTAEVPAEQGRGDWRAQG*LCFWPL
Trigger: GAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCTCTACCTCAAACACTaGGGATGGAGAGCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHLYLKH*GWRAQG
Trigger: GCCTTGGGCTCTCCATCCCCAGTGTTTGAGGTAGAG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR CCA 90 bp GCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCATGCAGGCTGGTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: ASIAPFRHDLGADLMQAGGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...ACCAGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCCACAGCCCCTACCTaGCCCAAACCCTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSTAPT*PKPLSS
Trigger: GGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTCCACAGCCCCTACCTaGCCCAAACCCTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSTAPT*PKPLSS
Trigger: GGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATTTTGAGGATGGGGCCTaGCTTGGACCAGTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHFEDGA*LGPVPL
Trigger: AAGAGGAACTGGTCCAAGCCAGGCCCCATCCTCAAA...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR CCA 90 bp GACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCATCTCATGCAGGCTGGTaGCGATGTTCTTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: DRTDSRAPLITSTPTGLASHAGW*RCSWQV
Trigger: CACCTGCCAAGAACATCGCCACCAGCCTGCATGAGA...TGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp GGGAGTTCTTCATGGGGTCTGGGATCCCAGACGTTTGGGCTTGAGGGAACCCCACACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 2 (lower is better)
Translates to: GSSSWGLGSQTFGLEGTPHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...TGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCATGAAGAACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp CTGGTGTTCTGTAGGTTCTGCCTTAAGGAGCTGGGGCGGACAGAGAGGCAAGCAACAGAAAGGGAGCCTTaGTGCTTCACAGCATCCAGT +
Preference number: 2 (lower is better)
Translates to: LVFCRFCLKELGRTERQATEREP*CFTASS
Trigger: ACTGGATGCTGTGAAGCACCAAGGCTCCCTTTCTGT...TGCTTGCCTCTCTGTCCGCCCCAGCTCCTTAAGGCAGAACCTACAGAACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR TCA 90 bp AAACACGTGGCACTTGAGCATCTGGGTCAGCTTATCTCGAGCTACGTAGGCAAATCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 2 (lower is better)
Translates to: KHVALEHLGQLISSYVGKSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...TTTGCCTACGTAGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 2 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHCAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR GCA 90 bp GGGAGTTCTTCATGGGGTCTGGGATCCCAGACGTTTGGGCTTGAGGGAACCCCACAGCTCATTCTTTGGTaGTGGGAATTCCACTTGGAA +
Preference number: 2 (lower is better)
Translates to: GSSSWGLGSQTFGLEGTPQLILW*WEFHLE
Trigger: TTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTG...TGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCATGAAGAACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CAA 90 bp AGTTTAGAGTGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATCTTGGAGCAGATCTCATGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLEWSRESPLTKQRA*RRSDMILEQISCRL
Trigger: CAGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR CAA 90 bp TGGAAAGGGACATCCACGAGTTTAGAGTGGTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGGAG +
Preference number: 2 (lower is better)
Translates to: WKGTSTSLEWSRESP*TKQRALRRSDMILE
Trigger: CTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGTCCCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp ACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCAACTGGCTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 2 (lower is better)
Translates to: TDSRAPLITSTPTGLATGWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...GCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGGGAACCCCAGCTACTaGGGAAGGGCAGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLGNPSY*GRAAQG
Trigger: CCCCTGGGCTGCCCTTCCTCAGTAGCTGGGGTTCCC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR-3UTR TCA 90 bp ACATCCACGAGTTTAGAGTGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 2 (lower is better)
Translates to: TSTSLEWSRESPLTKQRACAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...TGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR-3UTR GCA 90 bp ACATCCACGAGTTTAGAGTGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCAGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 2 (lower is better)
Translates to: TSTSLEWSRESPLTKQRADTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...TGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CCA 90 bp AACAGGTTTAGCAACTGGCACATTTCCCAGGTAATAGACTTGGAACTTCTGCACATCAAATGCCATGCCTaGCCACCGTCCCACCCACAA +
Preference number: 2 (lower is better)
Translates to: NRFSNWHISQVIDLELLHIKCHA*PPSHPQ
Trigger: TTGTGGGTGGGACGGTGGCCAGGCATGGCATTTGAT...GTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR CAA 90 bp TACCCCAACAGGTTTAGCAACTGGCACATTTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTCATTCTTTGGTGCTGGGAATTCCAC +
Preference number: 2 (lower is better)
Translates to: YPNRFSNWHISQVID*ELLHQLILWCWEFH
Trigger: GTGGAATTCCCAGCACCAAAGAATGAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR TCA 72 bp ACCCCTGCGGACTGTCCACCCTACACGTCTTGCAACTaGCTCCGCAGGGGGTGCTGGGAGGCAGGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: TPADCPPYTSCN*LRRGCWEAGGG
Trigger: TCCACCTCCTGCCTCCCAGCACCCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGACAGTCCGCAGGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 72 bp CTCCTGGGGAACTGGTTCTGGGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTCCTCGGGGTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: LLGNWFWAEALS*EGQCRLLGVLQ
Trigger: CTGAAGGACCCCGAGGAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGCCCCTGCTGGGCCTTaGAGGATGGGGCCTGGCTTG +
Preference number: 3 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHAPAGP*RMGPGL
Trigger: CAAGCCAGGCCCCATCCTCAAAGGCCCAGCAGGGGC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR TCA 72 bp CCCAGACGTTTGGGCTTGAGGGAACCCCACAGCGACTaGACACCCCTGCGGACTGTCCACCCTACACGTCTT +
Preference number: 3 (lower is better)
Translates to: PRRLGLREPHSD*TPLRTVHPTRL
Trigger: AAGACGTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 72 bp TGGCCCTGGTGTTCTGTAGGTTCTGCCTTAAGGAGCTaGGGCGGACAGAGAGGCAAGCATGCTGAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: WPWCSVGSALRS*GGQRGKHAEVG
Trigger: CCCCACCTCAGCATGCTTGCCTCTCTGTCCGCCCCAGCTCCTTAAGGCAGAACCTACAGAACACCAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR CAA 90 bp CTTGGAGTCCACTGCTCACGGCTACTGGAAGACAGGACTGACTCCAGGGCCCCACACAGAAAGGGAGCCTaGGTGCTTCACAGCATCCAG +
Preference number: 3 (lower is better)
Translates to: LGVHCSRLLEDRTDSRAPHRKGA*VLHSIQ
Trigger: CTGGATGCTGTGAAGCACCAAGGCTCCCTTTCTGTG...TGGGGCCCTGGAGTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR CCA 72 bp GGGCTCACACCAAAACATGTGACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAACGCGAATGTGTGCAC +
Preference number: 3 (lower is better)
Translates to: GLTPKHVTAEGG*AGSHDERECVH
Trigger: GTGCACACATTCGCGTTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 72 bp ACCTCCCTGTCCATGACAGCCTACAGGGTTTGGCCCTaGTGTTCTGTAGGTTCTGCCTTAAGGAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: TSLSMTAYRVWP*CSVGSALRSWG
Trigger: GCCCCAGCTCCTTAAGGCAGAACCTACAGAACACCAGGGCCAAACCCTGTAGGCTGTCATGGACAGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR CAA 90 bp AGTTCTTCATGGGGTCTGGGATCCCAGACGTTTGGGCTTGAGGGAACCCCACAGCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 3 (lower is better)
Translates to: SSSWGLGSQTFGLEGTPQRTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...CTGTGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCATGAAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CAA 90 bp GGGAGTTCTTCATGGGGTCTGGGATCCCAGACGTTTGGGCTTGAGGGAACCCCATCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 3 (lower is better)
Translates to: GSSSWGLGSQTFGLEGTPSRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...TGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCATGAAGAACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR TCA 72 bp TGGAGTCCACTGCTCACGGCTACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAATCACGTCTACCCCAAC +
Preference number: 3 (lower is better)
Translates to: WSPLLTATGRQD*LQGPINHVYPN
Trigger: GTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR TCA 72 bp CTGGTAGCGGAGCATGCATGCAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGGCTCACACCAAAACAT +
Preference number: 3 (lower is better)
Translates to: LVAEHACSLHSL*ETGSIGLTPKH
Trigger: ATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 72 bp CCCACAACCTCCCTGTCCATGACAGCCTACAGGGTTTaGCCCTGGTGTTCTGTAGGTTCTGCCTTAAGGAGC +
Preference number: 3 (lower is better)
Translates to: PTTSLSMTAYRV*PWCSVGSALRS
Trigger: GCTCCTTAAGGCAGAACCTACAGAACACCAGGGCCAAACCCTGTAGGCTGTCATGGACAGGGAGGTTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR TCA 72 bp TCTTGGCAGGTGCCTCACAGCGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTATCTCGAGCTACGTAGG +
Preference number: 3 (lower is better)
Translates to: SWQVPHSETRGT*ASGSAYLELRR
Trigger: CCTACGTAGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR GCA 72 bp CTCAAACACTGGGGATGGAGAGCCCAAGGCTGGCTTTaGTTCTGGCCCCTCATGTCATCAGTCCAGTGTAAT +
Preference number: 3 (lower is better)
Translates to: LKHWGWRAQGWL*FWPLMSSVQCN
Trigger: ATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCCAGTGTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CCA 72 bp ACAGCGAAACACTTGATCCCTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCT +
Preference number: 3 (lower is better)
Translates to: TAKHLIPGLAFR*DSFSSSWGTGS
Trigger: AGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTGTTTCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 72 bp TCAGCTTATCTCGAGCTACGTAGGCAAAGTCCCTGTTaGGGGAGGGTCACCTCAGTGTCTCCTAGAACCATC +
Preference number: 3 (lower is better)
Translates to: SAYLELRRQSPC*GRVTSVSPRTI
Trigger: GATGGTTCTAGGAGACACTGAGGTGACCCTCCCCCAACAGGGACTTTGCCTACGTAGCTCGAGATAAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
3UTR-3UTR CAA 90 bp GACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCATGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 3 (lower is better)
Translates to: DRTDSRAPLITSTPTGLAWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...TGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CAA 90 bp ACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCAACTGGCCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 3 (lower is better)
Translates to: TDSRAPLITSTPTGLATGRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...GCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR-3UTR CAA 90 bp ATTGACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 3 (lower is better)
Translates to: IDQAASIAPFRHDLGADLSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...GAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR-3UTR CAA 90 bp GAAGACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTACGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 3 (lower is better)
Translates to: EDRTDSRAPLITSTPTGLRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...TAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR-3UTR CAA 90 bp ACATCCACGAGTTTAGAGTGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATTGGACCAGTTCCTCTaGCTCTACCTCAAACACTGG +
Preference number: 3 (lower is better)
Translates to: TSTSLEWSRESPLTKQRALDQFL*LYLKHW
Trigger: CCAGTGTTTGAGGTAGAGCAAGAGGAACTGGTCCAA...TGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CCA 72 bp AATTCCACTTGGAAAGGGACATCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCA +
Preference number: 3 (lower is better)
Translates to: NSTWKGTSTSLE*SRESPLTKQRA
Trigger: TGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGTCCCTTTCCAAGTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGGGGGAGGCCCGGCCTaGGGGTTCCCACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGGGGPA*GFPLGG
Trigger: ACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGGGGGAGGCCCGGCCTaGGGGTTCCCACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSGGGPA*GFPLGG
Trigger: ACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGGGGGAGGCCCGGCCTaGGGGTTCCCACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPGGGPA*GFPLGG
Trigger: ACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGGGGTAAGGGGAAGCTaGGTGCAGGGCCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSGVRGS*VQGLRG
Trigger: GCCACGGAGGCCCTGCACTCAGCTTCCCCTTACCCC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGCTGGTGCAAGATGGTaGGGGTGGCAGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSAGARW*GWQGPR
Trigger: GCGTGGCCCCTGCCACCCTCACCATCTTGCACCAGC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCCGTCTGTGAGGGCCTaGGGCCCAGAGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGPSVRA*GPEGTS
Trigger: GGAAGTCCCCTCTGGGCCCCAGGCCCTCACAGACGG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGGGGGAGGCCCGGCCTaGGGGTTCCCACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPGGGPA*GFPLGG
Trigger: ACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CAA 72 bp ACTGAACACCCCTGCGGACTGTCCACCCTACACGTCTaGCAACTGACTCCGCAGGGGGTGCTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TEHPCGLSTLHV*QLTPQGVLGGR
Trigger: CCTGCCTCCCAGCACCCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGCTGGTGCAAGATGGTaGGGGTGGCAGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEAGARW*GWQGPR
Trigger: GCGTGGCCCCTGCCACCCTCACCATCTTGCACCAGC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGCTGGTGCAAGATGGTaGGGGTGGCAGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSAGARW*GWQGPR
Trigger: GCGTGGCCCCTGCCACCCTCACCATCTTGCACCAGC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGGGGTAAGGGGAAGCTaGGTGCAGGGCCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSGVRGS*VQGLRG
Trigger: GCCACGGAGGCCCTGCACTCAGCTTCCCCTTACCCC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGGGGTAAGGGGAAGCTaGGTGCAGGGCCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPGVRGS*VQGLRG
Trigger: GCCACGGAGGCCCTGCACTCAGCTTCCCCTTACCCC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCTGGTGCAAGATGGTaGGGGTGGCAGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSAGARW*GWQGPR
Trigger: GCGTGGCCCCTGCCACCCTCACCATCTTGCACCAGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTCTCAGCCTCCTGGCTaGCCTCCTCCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSQPPG*PPPPRS
Trigger: TGACCTTGGCGGAGGAGGCCAGCCAGGAGGCTGAGA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCCGTCTGTGAGGGCCTaGGGCCCAGAGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPPSVRA*GPEGTS
Trigger: GGAAGTCCCCTCTGGGCCCCAGGCCCTCACAGACGG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSLHSL*ETGSIG
Trigger: CCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGAACCCCACAGCGACTaGACACCCCTGCGGACTGTC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEEPHSD*TPLRTV
Trigger: GACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGAACCCCACAGCGACTaGACACCCCTGCGGACTGTC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSEPHSD*TPLRTV
Trigger: GACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAAGCCCTCGGTTGGCTaGATTGTGGGCCGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGKPSVG*IVGREL
Trigger: GAGCTCTCGGCCCACAATGCAGCCAACCGAGGGCTT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCCATAGGAGGGGCTaGCCTGTGATAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSHRRG*PVIRWP
Trigger: GGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGCGACTGAACACCCCTaGGGACTGTCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSATEHP*GLSTLH
Trigger: GTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTCTCAGCCTCCTGGCTaGCCTCCTCCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSQPPG*PPPPRS
Trigger: TGACCTTGGCGGAGGAGGCCAGCCAGGAGGCTGAGA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGGGGGAGGCCCGGCCTaGGGGTTCCCACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFGGGPA*GFPLGG
Trigger: ACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSLHSL*ETGSIG
Trigger: CCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGAACCCCACAGCGACTaGACACCCCTGCGGACTGTC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSEPHSD*TPLRTV
Trigger: GACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGAACCCCACAGCGACTaGACACCCCTGCGGACTGTC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPEPHSD*TPLRTV
Trigger: GACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTGGTTATGGGCAGCGTaGAGGGGTAAGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSWLWAA*RGKGKL
Trigger: CAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCTCCTCAGCCTCTCCTaGTGCCTTCTCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSLLSLS*CLLLSF
Trigger: GAAGGAGAGGAGAAGGCAGCAGGAGAGGCTGAGGAG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCTCCTCAGCCTCTCCTaGTGCCTTCTCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGLLSLS*CLLLSF
Trigger: GAAGGAGAGGAGAAGGCAGCAGGAGAGGCTGAGGAG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCAGCCATAGGAGGGGCTaGCCTGTGATAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSHRRG*PVIRWP
Trigger: GGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTCTGGTAGCGGAGCATaGATGCAGCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSGSGA*MQPAQP
Trigger: AGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGCGACTGAACACCCCTaGGGACTGTCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEATEHP*GLSTLH
Trigger: GTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCGACTGAACACCCCTaGGGACTGTCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPATEHP*GLSTLH
Trigger: GTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGGCATTGGCAGGGCCTaGTTCAGGCACACTACCCTC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEGIGRA*FRHTTL
Trigger: GAGGGTAGTGTGCCTGAACCAGGCCCTGCCAATGCC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSQSQLH*GLLTGF
Trigger: GAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGQSQLH*GLLTGF
Trigger: GAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCTGGGGAACTGGTTCTaGGCTGAGGCTCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLGNWF*AEALSW
Trigger: CCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTGGGGAACTGGTTCTaGGCTGAGGCTCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWELGNWF*AEALSW
Trigger: CCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGTCTCGTCCTCCAGCTaGAGCAGCAGATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSVSSSS*SSRSFP
Trigger: GGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGAC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGTCTCGTCCTCCAGCTaGAGCAGCAGATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGVSSSS*SSRSFP
Trigger: GGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGAC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCACGCTGACGTGACTTaGAGTCCACTGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGHADVT*SPLLTA
Trigger: AGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAA +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSTAEGG*AGSHDE
Trigger: TTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAA +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGTAEGG*AGSHDE
Trigger: TTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGGGGTAAGGGGAAGCTaGGTGCAGGGCCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFGVRGS*VQGLRG
Trigger: GCCACGGAGGCCCTGCACTCAGCTTCCCCTTACCCC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAATCAAGGCGGATCCATaGAGCCCTCGGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPIKADP*SPRLAA
Trigger: TGCAGCCAACCGAGGGCTTCATGGATCCGCCTTGAT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCTGAGCTGGGAAGGACAATGTCGCCTCCTCGGGGTCCTTCAGTCCCAACTCCACAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SELGRTMSPPRGPSVPTPQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...TGGAGTTGGGACTGAAGGACCCCGAGGAGGCGACATTGTCCTTCCCAGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGCACAGCGAAACACTTaGTCCCTGGGTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSAQRNT*SLGWHS
Trigger: GGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGCTGGTGCAAGATGGTaGGGGTGGCAGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDAGARW*GWQGPR
Trigger: GCGTGGCCCCTGCCACCCTCACCATCTTGCACCAGC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSLHSL*ETGSIG
Trigger: CCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSLHSL*ETGSIG
Trigger: CCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTGGTTATGGGCAGCGTaGAGGGGTAAGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSWLWAA*RGKGKL
Trigger: CAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTAAGCCCTCGGTTGGCTaGATTGTGGGCCGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPKPSVG*IVGREL
Trigger: GAGCTCTCGGCCCACAATGCAGCCAACCGAGGGCTT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCTCCTCAGCCTCTCCTaGTGCCTTCTCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLLSLS*CLLLSF
Trigger: GAAGGAGAGGAGAAGGCAGCAGGAGAGGCTGAGGAG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTAGCCATAGGAGGGGCTaGCCTGTGATAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSHRRG*PVIRWP
Trigger: GGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGCTTCTGTCTGCTGGTaGAAGATGGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSASVCW*KMVRVA
Trigger: TGCCACCCTCACCATCTTGCACCAGCAGACAGAAGC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTCTGGTAGCGGAGCATaGATGCAGCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSGSGA*MQPAQP
Trigger: AGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGCGACTGAACACCCCTaGGGACTGTCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPATEHP*GLSTLH
Trigger: GTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTTGGCGTTGAGCAGCTaGTTATGGGCAGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLALSS*LWAACR
Trigger: CCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATTCTCAGCCTCCTGGCTaGCCTCCTCCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHSQPPG*PPPPRS
Trigger: TGACCTTGGCGGAGGAGGCCAGCCAGGAGGCTGAGA...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCCGTCTGTGAGGGCCTaGGGCCCAGAGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFPSVRA*GPEGTS
Trigger: GGAAGTCCCCTCTGGGCCCCAGGCCCTCACAGACGG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPQSQLH*GLLTGF
Trigger: GAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GAAAGGGAGCCTTGGTGCTTCACAGCATCCAGTCTAGGTGTAGGAGGAGGAGGCCTGGGGAACTGGTTCTaGGCTGAGGCTCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EREPWCFTASSLGVGGGGLGNWF*AEALSW
Trigger: CCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAG...GCCTCCTCCTCCTACACCTAGACTGGATGCTGTGAAGCACCAAGGCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCTGGGGAACTGGTTCTaGGCTGAGGCTCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSLGNWF*AEALSW
Trigger: CCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCTGGGGAACTGGTTCTaGGCTGAGGCTCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPLGNWF*AEALSW
Trigger: CCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTGGTGGCGATGTTCTTaGCAGGTGCCTCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGWWRCS*QVPHSE
Trigger: TTCGCTGTGAGGCACCTGCCAAGAACATCGCCACCA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTGGTGGCGATGTTCTTaGCAGGTGCCTCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSWWRCS*QVPHSE
Trigger: TTCGCTGTGAGGCACCTGCCAAGAACATCGCCACCA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTCTCATGCAGGCTGGTaGCGATGTTCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSHAGW*RCSWQV
Trigger: CACCTGCCAAGAACATCGCCACCAGCCTGCATGAGA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCACGCTGACGTGACTTaGAGTCCACTGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSHADVT*SPLLTA
Trigger: AGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACACGCTGACGTGACTTaGAGTCCACTGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPHADVT*SPLLTA
Trigger: AGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGTASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAA +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWETAEGG*AGSHDE
Trigger: TTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAA +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSTAEGG*AGSHDE
Trigger: TTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAA +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPTAEGG*AGSHDE
Trigger: TTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTATCAAGGCGGATCCATaGAGCCCTCGGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPIKADP*SPRLAA
Trigger: TGCAGCCAACCGAGGGCTTCATGGATCCGCCTTGAT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTAGGGAGAGTCCATTaGCCAAGCAGCGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWELGRVH*PSSEHC
Trigger: GCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACTAGGGAGAGTCCATTaGCCAAGCAGCGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPLGRVH*PSSEHC
Trigger: GCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTACCACAGCTGTGGCTTaGAGCTTGGCGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPTTAVA*SLALSS
Trigger: GCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATAGCCATAGGAGGGGCTaGCCTGTGATAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHSHRRG*PVIRWP
Trigger: GGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGATGTTCTTGGCAGGTaGCTCACAGCGAAACACGTG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGDVLGR*LTAKHV
Trigger: CACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGCTTCTGTCTGCTGGTaGAAGATGGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEASVCW*KMVRVA
Trigger: TGCCACCCTCACCATCTTGCACCAGCAGACAGAAGC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGATGAACGCGAATGTGTaGACATCTCTGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGMNANV*TSLPTA
Trigger: GGCTGTGGGCAGAGATGTGCACACATTCGCGTTCAT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCTGGTAGCGGAGCATaGATGCAGCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSGSGA*MQPAQP
Trigger: AGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGCGTTAATGGCCGACTaGCTCAGGGATGATGGAACA +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGALMAD*LRDDGT
Trigger: TGTTCCATCATCCCTGAGCCAGTCGGCCATTAACGC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTTGAGCAGCTGGTTATaGGCAGCGTGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLSSWL*AACRGK
Trigger: CTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTTGGCGTTGAGCAGCTaGTTATGGGCAGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPLALSS*LWAACR
Trigger: CCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTTGGCGTTGAGCAGCTaGTTATGGGCAGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSLALSS*LWAACR
Trigger: CCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTTAACCACTTGGCATTaGCAGGGCCTGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSLTTWH*QGLVQA
Trigger: TGCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCGGTTGGCTGCATTGTaGGCCGAGAGCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHRLAAL*AESSSS
Trigger: TGAGCTGGAGCTCTCGGCCCACAATGCAGCCAACCG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGPSRKR*GSRRNL
Trigger: CAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSPSRKR*GSRRNL
Trigger: CAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWELGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPLGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSQSQLH*GLLTGF
Trigger: GAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCTGGGGAACTGGTTCTaGGCTGAGGCTCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHLGNWF*AEALSW
Trigger: CCAGCTCAGAGCCTCAGCCCAGAACCAGTTCCCCAG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GAGCCTTGGTGCTTCACAGCATCCAGTCTAGGTGTAGGAGGAGGAGGCACAGTCGTCTCGTCCTCCAGCTaGAGCAGCAGATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: EPWCFTASSLGVGGGGTVVSSSS*SSRSFP
Trigger: GGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGAC...GACTGTGCCTCCTCCTCCTACACCTAGACTGGATGCTGTGAAGCACCAAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGTCTCGTCCTCCAGCTaGAGCAGCAGATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPVSSSS*SSRSFP
Trigger: GGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGAC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GAGCCTTGGTGCTTCACAGCATCCAGTCTAGGTGTAGGAGGAGGAGGCACAGTCGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: EPWCFTASSLGVGGGGTVACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...GACTGTGCCTCCTCCTCCTACACCTAGACTGGATGCTGTGAAGCACCAAGGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGGTGGCGATGTTCTTaGCAGGTGCCTCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEWWRCS*QVPHSE
Trigger: TTCGCTGTGAGGCACCTGCCAAGAACATCGCCACCA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATGGTGGCGATGTTCTTaGCAGGTGCCTCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPWWRCS*QVPHSE
Trigger: TTCGCTGTGAGGCACCTGCCAAGAACATCGCCACCA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCTCATGCAGGCTGGTaGCGATGTTCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWESHAGW*RCSWQV
Trigger: CACCTGCCAAGAACATCGCCACCAGCCTGCATGAGA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCTCATGCAGGCTGGTaGCGATGTTCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPSHAGW*RCSWQV
Trigger: CACCTGCCAAGAACATCGCCACCAGCCTGCATGAGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGATCTCATGCAGGCTaGTGGCGATGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSRSHAG*WRCSWQ
Trigger: CTGCCAAGAACATCGCCACCAGCCTGCATGAGATCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSTASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPTASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWETASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CAA 72 bp CCTAGGGAGCGCACAGCGAAACACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGCTTCTCTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PRERTAKHLIPG*AFRWDSFSSSW
Trigger: CCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCGCTCCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCAGCTTATCTCGAGCTACGTAGGCAAAGTCCCTGTTGGGGGAGGGTCACCTCATCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: SAYLELRRQSPCWGRVTSSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...TGAGGTGACCCTCCCCCAACAGGGACTTTGCCTACGTAGCTCGAGATAAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATTCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCACAGCGAAACACTTaGTCCCTGGGTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSAQRNT*SLGWHS
Trigger: GGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSETRGT*ASGSAY
Trigger: ATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGETRGT*ASGSAY
Trigger: ATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGCAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSCAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCTAGGGAGAGTCCATTaGCCAAGCAGCGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPLGRVH*PSSEHC
Trigger: GCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCTAGGGAGAGTCCATTaGCCAAGCAGCGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSLGRVH*PSSEHC
Trigger: GCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAAT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWETGRQD*LQGPIN
Trigger: ATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAAT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSTGRQD*LQGPIN
Trigger: ATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGAACCCCACAGCGACTaGACACCCCTGCGGACTGTC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFEPHSD*TPLRTV
Trigger: GACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTAGAATCAGGCCAAAATaGAGCCCCTTCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPRIRPK*SPFSHP
Trigger: GGGGTGGGAGAAGGGGCTTCATTTTGGCCTGATTCT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR GCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATTGGTTATGGGCAGCGTaGAGGGGTAAGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHWLWAA*RGKGKL
Trigger: CAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCA...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGTCCTCATCACTGGCTaGACTGTTTCGCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGVLITG*TVSHAK
Trigger: TTTGGCATGCGAAACAGTGCAGCCAGTGATGAGGAC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGATGTTCTTGGCAGGTaGCTCACAGCGAAACACGTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPDVLGR*LTAKHV
Trigger: CACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGCTTCTGTCTGCTGGTaGAAGATGGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPASVCW*KMVRVA
Trigger: TGCCACCCTCACCATCTTGCACCAGCAGACAGAAGC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCTTCTGTCTGCTGGTaGAAGATGGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSASVCW*KMVRVA
Trigger: TGCCACCCTCACCATCTTGCACCAGCAGACAGAAGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGATGAACGCGAATGTGTaGACATCTCTGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEMNANV*TSLPTA
Trigger: GGCTGTGGGCAGAGATGTGCACACATTCGCGTTCAT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCATGAACGCGAATGTGTaGACATCTCTGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSMNANV*TSLPTA
Trigger: GGCTGTGGGCAGAGATGTGCACACATTCGCGTTCAT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCGTTAATGGCCGACTaGCTCAGGGATGATGGAACA +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPALMAD*LRDDGT
Trigger: TGTTCCATCATCCCTGAGCCAGTCGGCCATTAACGC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTTGAGCAGCTGGTTATaGGCAGCGTGCAGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSLSSWL*AACRGK
Trigger: CTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACACTTCGAAGGTCCTTaGGTACCACAGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPHFEGP*VPQLWL
Trigger: AAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATTAACCACTTGGCATTaGCAGGGCCTGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPLTTWH*QGLVQA
Trigger: TGCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTCTCAGCCTCCTGGCTaGCCTCCTCCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSQPPG*PPPPRS
Trigger: TGACCTTGGCGGAGGAGGCCAGCCAGGAGGCTGAGA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCTGGTCCCTGTTCCTaGGTGTTGATGATCAAGGCG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPSGPCS*VLMIKA
Trigger: CGCCTTGATCATCAACACCCAGGAACAGGGACCAGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACTCCTCTCCTTCATCTaGTCCCTGTTCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPLLSFI*SLFLGV
Trigger: AACACCCAGGAACAGGGACCAGATGAAGGAGAGGAG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCTCCTCTCCTTCATCTaGTCCCTGTTCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLLSFI*SLFLGV
Trigger: AACACCCAGGAACAGGGACCAGATGAAGGAGAGGAG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEPSRKR*GSRRNL
Trigger: CAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TGCAGCAGCGTCTGGTTCTGTGGCTCCACCAACTTTAGAGTCTCGTCCTCCAGCCTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: CSSVWFCGSTNFRVSSSSLGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...GCTGGAGGACGAGACTCTAAAGTTGGTGGAGCCACAGAACCAGACGCTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPLGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHQSQLH*GLLTGF
Trigger: GAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGTCTCGTCCTCCAGCTaGAGCAGCAGATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHVSSSS*SSRSFP
Trigger: GGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGAC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAAGATCTCATGCAGGCTaGTGGCGATGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPRSHAG*WRCSWQ
Trigger: CTGCCAAGAACATCGCCACCAGCCTGCATGAGATCT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGAGATCTCATGCAGGCTaGTGGCGATGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWERSHAG*WRCSWQ
Trigger: CTGCCAAGAACATCGCCACCAGCCTGCATGAGATCT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPTASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGCACAGCGAAACACTTaGTCCCTGGGTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHAQRNT*SLGWHS
Trigger: GGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCATGCAGGCTGGTGCACAGCGAAACACTTaGTCCCTGGGTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ASIAPFRHDLGADLMQAGAQRNT*SLGWHS
Trigger: GGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGC...ACCAGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEETRGT*ASGSAY
Trigger: ATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWECAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCTAGGGAGAGTCCATTaGCCAAGCAGCGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHLGRVH*PSSEHC
Trigger: GCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAAT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSTGRQD*LQGPIN
Trigger: ATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATAGCCTGCACAGCCTCTaGGAGACTGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSLHSL*ETGSIG
Trigger: CCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCT...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATAAGCCCTCGGTTGGCTaGATTGTGGGCCGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDKPSVG*IVGREL
Trigger: GAGCTCTCGGCCCACAATGCAGCCAACCGAGGGCTT...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGTCCTCATCACTGGCTaGACTGTTTCGCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSVLITG*TVSHAK
Trigger: TTTGGCATGCGAAACAGTGCAGCCAGTGATGAGGAC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGATGTTCTTGGCAGGTaGCTCACAGCGAAACACGTG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSDVLGR*LTAKHV
Trigger: CACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGATGTTCTTGGCAGGTaGCTCACAGCGAAACACGTG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPDVLGR*LTAKHV
Trigger: CACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTATGAACGCGAATGTGTaGACATCTCTGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPMNANV*TSLPTA
Trigger: GGCTGTGGGCAGAGATGTGCACACATTCGCGTTCAT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGCGACTGAACACCCCTaGGGACTGTCCACCCTACAC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDATEHP*GLSTLH
Trigger: GTGTAGGGTGGACAGTCCGCAGGGGTGTTCAGTCGC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCGTTAATGGCCGACTaGCTCAGGGATGATGGAACA +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSALMAD*LRDDGT
Trigger: TGTTCCATCATCCCTGAGCCAGTCGGCCATTAACGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGGCATTGGCAGGGCCTaGTTCAGGCACACTACCCTC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFGIGRA*FRHTTL
Trigger: GAGGGTAGTGTGCCTGAACCAGGCCCTGCCAATGCC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGGCATTGGCAGGGCCTaGTTCAGGCACACTACCCTC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDGIGRA*FRHTTL
Trigger: GAGGGTAGTGTGCCTGAACCAGGCCCTGCCAATGCC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTTCCTTTAACCACTTaGCATTGGCAGGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWELPLTT*HWQGLV
Trigger: AACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGATGCATTAAGCCTTTaGGACCCAAAGGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEDALSL*DPKVPS
Trigger: AGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATC...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGATGCATTAAGCCTTTaGGACCCAAAGGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPDALSL*DPKVPS
Trigger: AGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCGGTTGGCTGCATTGTaGGCCGAGAGCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFRLAAL*AESSSS
Trigger: TGAGCTGGAGCTCTCGGCCCACAATGCAGCCAACCG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCTGGTCCCTGTTCCTaGGTGTTGATGATCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSGPCS*VLMIKA
Trigger: CGCCTTGATCATCAACACCCAGGAACAGGGACCAGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTCTGGTCCCTGTTCCTaGGTGTTGATGATCAAGGCG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSGPCS*VLMIKA
Trigger: CGCCTTGATCATCAACACCCAGGAACAGGGACCAGA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTGCCCTGTGATAAGGTaGCCCAGCTTGAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPCPVIR*PSLSPH
Trigger: ATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTGCCCTGTGATAAGGTaGCCCAGCTTGAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSCPVIR*PSLSPH
Trigger: ATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPPSRKR*GSRRNL
Trigger: CAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTAGATCTCATGCAGGCTaGTGGCGATGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSRSHAG*WRCSWQ
Trigger: CTGCCAAGAACATCGCCACCAGCCTGCATGAGATCT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTAGATCTCATGCAGGCTaGTGGCGATGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPRSHAG*WRCSWQ
Trigger: CTGCCAAGAACATCGCCACCAGCCTGCATGAGATCT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSRDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGRDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCAGGAGGTGGAGGTCTaGGAGCGAGCATCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFQEVEV*ERASRH
Trigger: GTGTCTGGATGCTCGCTCCCAGACCTCCACCTCCTG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CAA 72 bp CACAGCGAAACACTTGATCCCTGGGTTGGCATTCCGTaGGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: HSETLDPWVGIP*GQLLFLLGNWF
Trigger: GAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
3UTR CAA 72 bp ACCCACAACCTCCCTGTCCATGACAGCCTACAGGGTTaGGCCCTGGTGTTCTGTAGGTTCTGCCTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: THNLPVHDSLQG*ALVFCRFCLKE
Trigger: CTCCTTAAGGCAGAACCTACAGAACACCAGGGCCAAACCCTGTAGGCTGTCATGGACAGGGAGGTTGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCATCAAGGCGGATCCATaGAGCCCTCGGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFIKADP*SPRLAA
Trigger: TGCAGCCAACCGAGGGCTTCATGGATCCGCCTTGAT...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCAAAGCCAGTCCAGGTaGGCTGGGACTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFQSQSR*AGTLLG
Trigger: CCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCAGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: DRTDSRAPLITSTPTGLAGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...TGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSETRGT*ASGSAY
Trigger: ATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPETRGT*ASGSAY
Trigger: ATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSCAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPCAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAAT +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHTGRQD*LQGPIN
Trigger: ATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp ACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGCAACTGGCCCCGCACCCCCAGAGTaGAGCTGGTTCCTTCATTTA +
Preference number: 4 (lower is better)
Translates to: TDSRAPLITSTPTGLATGPAPPE*SWFLHL
Trigger: TAAATGAAGGAACCAGCTTCACTCTGGGGGTGCGGG...GCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTGGTTATGGGCAGCGTaGAGGGGTAAGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFWLWAA*RGKGKL
Trigger: CAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTCAGAGTATAGATaGATTAAGCCTTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSSEYR*IKPLGP
Trigger: GGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCTCCTCAGCCTCTCCTaGTGCCTTCTCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFLLSLS*CLLLSF
Trigger: GAAGGAGAGGAGAAGGCAGCAGGAGAGGCTGAGGAG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCAGCTCATTCTTTGGTaGTGGGAATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGQLILW*WEFHLE
Trigger: TTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATATGAACGCGAATGTGTaGACATCTCTGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHMNANV*TSLPTA
Trigger: GGCTGTGGGCAGAGATGTGCACACATTCGCGTTCAT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTCTGGTAGCGGAGCATaGATGCAGCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSGSGA*MQPAQP
Trigger: AGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCTGGTAGCGGAGCATaGATGCAGCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSGSGA*MQPAQP
Trigger: AGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCACTTCGAAGGTCCTTaGGTACCACAGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHHFEGP*VPQLWL
Trigger: AAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCTTCCTTTAACCACTTaGCATTGGCAGGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPLPLTT*HWQGLV
Trigger: AACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGATGCATTAAGCCTTTaGGACCCAAAGGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSDALSL*DPKVPS
Trigger: AGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGTCTCGTCCTCCAGCTaGAGCAGCAGATCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFVSSSS*SSRSFP
Trigger: GGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGAC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATAGATCTCATGCAGGCTaGTGGCGATGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHRSHAG*WRCSWQ
Trigger: CTGCCAAGAACATCGCCACCAGCCTGCATGAGATCT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWESTSLE*SRESPL
Trigger: CAATGGACTCTCCCTAGACCACTCTAAACTCGTGGA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPSTSLE*SRESPL
Trigger: CAATGGACTCTCCCTAGACCACTCTAAACTCGTGGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSTSLE*SRESPL
Trigger: CAATGGACTCTCCCTAGACCACTCTAAACTCGTGGA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GMESPRLALLLAPHVISPHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCACGCTGACGTGACTTaGAGTCCACTGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDHADVT*SPLLTA
Trigger: AGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCACGCTGACGTGACTTaGAGTCCACTGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFHADVT*SPLLTA
Trigger: AGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCACAGCAGAAGGAGGCTaGGCCGGCAGCCATGATGAA +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFTAEGG*AGSHDE
Trigger: TTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGT...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWERDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSRDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGCACAGCGAAACACTTaGTCCCTGGGTTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFAQRNT*SLGWHS
Trigger: GGAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCAGCTCAGAGTATAGATaGATTAAGCCTTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSSEYR*IKPLGP
Trigger: GGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGAGCTCAGAGTATAGATaGATTAAGCCTTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWESSEYR*IKPLGP
Trigger: GGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCAGCTCATTCTTTGGTaGTGGGAATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEQLILW*WEFHLE
Trigger: TTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGCTTCTGTCTGCTGGTaGAAGATGGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFASVCW*KMVRVA
Trigger: TGCCACCCTCACCATCTTGCACCAGCAGACAGAAGC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDLGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGGGGGAGGCCCGGCCTaGGGGTTCCCACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLGGGPA*GFPLGG
Trigger: ACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATTTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp ATTGACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCAGCTTCTCTTCCTCCTaGGGAACTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IDQAASIAPFRHDLGADLSFSSS*GTGSGL
Trigger: CAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCT...GAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp GAAGACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EDRTDSRAPLITSTPTGLGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...TAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AACAGGTTTAGCAACTGGCACATTTCCCAGGTAATAGACTTGGAACTTCTGCACCACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: NRFSNWHISQVIDLELLHHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...GTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCTCATGCAGGCTGGTaGCGATGTTCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSHAGW*RCSWQV
Trigger: CACCTGCCAAGAACATCGCCACCAGCCTGCATGAGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDTASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSRDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CAA 72 bp TGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATCTTGGAGCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: WSRESPLTKQRA*RRSDMILEQIS
Trigger: TGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
3UTR CAA 72 bp ACATCCACGAGTTTAGAGTGGTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTGCGCCGTTCAGACATG +
Preference number: 4 (lower is better)
Translates to: TSTSLEWSRESP*TKQRALRRSDM
Trigger: CATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCACTGGAAGACAGGACTaGCTCCAGGGCCCCATTAAT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFTGRQD*LQGPIN
Trigger: ATTAATGGGGCCCTGGAGTCAGTCCTGTCTTCCAGT...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGATGTTCTTGGCAGGTaGCTCACAGCGAAACACGTG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFDVLGR*LTAKHV
Trigger: CACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGATGTTCTTGGCAGGTaGCTCACAGCGAAACACGTG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDDVLGR*LTAKHV
Trigger: CACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCAGCTCATTCTTTGGTaGTGGGAATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPQLILW*WEFHLE
Trigger: TTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCAGCTCATTCTTTGGTaGTGGGAATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSQLILW*WEFHLE
Trigger: TTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATATGAACGCGAATGTGTaGACATCTCTGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDMNANV*TSLPTA
Trigger: GGCTGTGGGCAGAGATGTGCACACATTCGCGTTCAT...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTTAACCACTTGGCATTaGCAGGGCCTGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDLTTWH*QGLVQA
Trigger: TGCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCTGGTCCCTGTTCCTaGGTGTTGATGATCAAGGCG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSGPCS*VLMIKA
Trigger: CGCCTTGATCATCAACACCCAGGAACAGGGACCAGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTGCCCTGTGATAAGGTaGCCCAGCTTGAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDCPVIR*PSLSPH
Trigger: ATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGAAACACGTGGCACTTaGGCATCTGGGTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDETRGT*ASGSAY
Trigger: ATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTGCGCCGTTCAGACATaGTCTTGGAGCAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFCAVQT*SWSRSH
Trigger: ATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGTCCTCATCACTGGCTaGACTGTTTCGCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFVLITG*TVSHAK
Trigger: TTTGGCATGCGAAACAGTGCAGCCAGTGATGAGGAC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp ATTGACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGGAGCAGATCTCGATACAATTGTTGACTaGCACACTGCTGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IDQAASIAPFRHDLGADLDTIVD*HTAASW
Trigger: CCAGGACGCAGCAGTGTGGCAGTCAACAATTGTATC...GAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCTTCCTTTAACCACTTaGCATTGGCAGGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDLPLTT*HWQGLV
Trigger: AACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTGGCACTTGAGCATCTaGGTCAGCTTATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFWHLSI*VSLSRA
Trigger: AGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp AACAGGTTTAGCAACTGGCACATTTCCCAGGTAATAGACTTGGAACTTCTGCACGCTGAGGCTCTGAGCTaGGAAGGACAATGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: NRFSNWHISQVIDLELLHAEALS*EGQCRL
Trigger: GAGGCGACATTGTCCTTCCCAGCTCAGAGCCTCAGC...GTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCACACTGCTGCGTCCTaGGGCCAGCTCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLHTAAS*GQLLLG
Trigger: ACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSTSLE*SRESPL
Trigger: CAATGGACTCTCCCTAGACCACTCTAAACTCGTGGA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCCACGAGTTTAGAGTaGTCTAGGGAGAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSTSLE*SRESPL
Trigger: CAATGGACTCTCCCTAGACCACTCTAAACTCGTGGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: FISDISTAEVPAEQGRGDRDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCAGAGACTGGCAGCATTaGGCTCACACCAAAACATGT +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFRDWQH*AHTKTC
Trigger: ACATGTTTTGGTGTGAGCCCAATGCTGCCAGTCTCT...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTGGCAGGGGCCACGCTaGCGTGACTTGGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLWQGPR*RDLEST
Trigger: AGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCAGCTCATTCTTTGGTaGTGGGAATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFQLILW*WEFHLE
Trigger: TTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCCAGACGTTTGGGCTTaGGGGAACCCCACAGCGACT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLPDVWA*GNPTAT
Trigger: AGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCCAGTCCAGGTGAGCTaGGACTCTTCTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLPVQVS*DSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCTTGCAGCTTGGCGTTaGGCAGCTGGTTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLAAWR*AAGYGQ
Trigger: CTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTCTGGGCTGAGGCTCTaGGCTGGGAAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSGLRL*AGKDNV
Trigger: GACATTGTCCTTCCCAGCTCAGAGCCTCAGCCCAGA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLQSQLH*GLLTGF
Trigger: GAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGCATGCAGCAGCGTCTaGTTCTGTGGCTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLACSSV*FCGSTN
Trigger: GTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCACGCTGACGTGACTTaGAGTCCACTGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLHADVT*SPLLTA
Trigger: AGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
3UTR CAA 72 bp AGGTTTAGCAACTGGCACATTTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTCATTCTTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RFSNWHISQVID*ELLHQLILWCW
Trigger: CCAGCACCAAAGAATGAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186814.2
ENSMUST00000188001.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGGCGGATACAATTGTTaGCTGCCACACTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLGGYNC*LPHCCV
Trigger: GACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCTAGGGAGAGTCCATTaGCCAAGCAGCGAGCATTGC +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLGRVH*PSSEHC
Trigger: GCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGCTTCTGTCTGCTGGTaGAAGATGGTGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLASVCW*KMVRVA
Trigger: TGCCACCCTCACCATCTTGCACCAGCAGACAGAAGC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCTGGGTGGTCCCTGTTaGGATGTGCCAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLGGPC*DVPVVG
Trigger: ACCTACTACTGGCACATCCCAACAGGGACCACCCAG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLGLAFR*DSFSSS
Trigger: GGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTCTCATGCAGGCTGGTaGCGATGTTCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSHAGW*RCSWQV
Trigger: CACCTGCCAAGAACATCGCCACCAGCCTGCATGAGA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCACCGCTTCTGTCTGCTaGTGCAAGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLTASVC*CKMVRV
Trigger: CACCCTCACCATCTTGCACCAGCAGACAGAAGCGGT...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR TCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTCACACCAAAACATGTaGCAGCAGAAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSHQNM*QQKEAG
Trigger: CCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR GCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCATGTGTGCACATCTCTaGCCACAGCCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLMCAHL*PQPGRR
Trigger: TCTCCTTCCTGGCTGTGGGCAGAGATGTGCACACAT...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCACTTCGAAGGTCCTTaGGTACCACAGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLHFEGP*VPQLWL
Trigger: AAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCTCCTCTCCTTCATCTaGTCCCTGTTCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLLSFI*SLFLGV
Trigger: AACACCCAGGAACAGGGACCAGATGAAGGAGAGGAG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTGCCCTGTGATAAGGTaGCCCAGCTTGAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLCPVIR*PSLSPH
Trigger: ATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLPSRKR*GSRRNL
Trigger: CAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCTTCCTTTAACCACTTaGCATTGGCAGGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLPLTT*HWQGLV
Trigger: AACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGATGCATTAAGCCTTTaGGACCCAAAGGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLDALSL*DPKVPS
Trigger: AGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTTGGGGCCTCCTCACTaGGTTCATCCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLGPPH*VHPSKT
Trigger: AGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CCA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCACCAGCTCATTCTTTaGTGCTGGGAATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLHQLIL*CWEFHL
Trigger: CAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp AGGCTAGCACTCTTGCTGTGTTCCCGGGGGCCGTCTGTGAGGGCCTaGGGCCCAGAGGGGACTTCCACATTCTCCAGAGGCTCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RLALLLCSRGPSVRA*GPEGTSTFSRGSGS
Trigger: GCTACCTGAGCCTCTGGAGAATGTGGAAGTCCCCTCTGGGCCCCAGGCCCTCACAGACGGCCCCCGGGAACACAGCAAGAGTGCTAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp GGTACCACAGCTGTGGCTTGCAGCTTGGCGTTGAGCAGCTGGTTATaGGCAGCGTGCAGGGGTAAGGGGAAGCTGAGTGCAGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GTTAVACSLALSSWL*AACRGKGKLSAGPP
Trigger: CGGAGGCCCTGCACTCAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp TCCTGGCTGGCCTCCTCCGCCAAGGTCAAGGTCACATTTCGGTTCTaGTCTCGGTGGGCTGTGGCAGCCCTCCGAAGCTGGTTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SWLASSAKVKVTFRF*SRWAVAALRSWFWP
Trigger: AGGCCAGAACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCGAAATGTGACCTTGACCTTGGCGGAGGAGGCCAGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCCTCGGTTGGCTGCATaGTGGGCCGAGAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGPRLAA*WAESSS
Trigger: GCTGGAGCTCTCGGCCCACAATGCAGCCAACCGAGG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGGAGGCTAGCACTCTaGCTGTGTTCCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGRRLAL*LCSRGP
Trigger: CGGCCCCCGGGAACACAGCAAGAGTGCTAGCCTCCT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGGAGGCTAGCACTCTaGCTGTGTTCCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSRRLAL*LCSRGP
Trigger: CGGCCCCCGGGAACACAGCAAGAGTGCTAGCCTCCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp CGGTTCTGGTCTCGGTGGGCTGTGGCAGCCCTCCGAAGCTGGTTCTaGCCTTCCTTTAACCACTTGGCATTGGCAGGGCCTGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: RFWSRWAVAALRSWF*PSFNHLALAGPGSG
Trigger: GCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGGCCAGAACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCCTCGGTTGGCTGCATaGTGGGCCGAGAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSPRLAA*WAESSS
Trigger: GCTGGAGCTCTCGGCCCACAATGCAGCCAACCGAGG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCCCAGACGTTTGGGCTaGAGGGAACCCCACAGCGAC +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSPRRLG*REPHSD
Trigger: GTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp TGGGCAGCGTGCAGGGGTAAGGGGAAGCTGAGTGCAGGGCCTCCGTaGCTGTTAGCGTTAATGGCCGACTGGCTCAGGGATGATGGAACA +
Preference number: 5 (lower is better)
Translates to: WAACRGKGKLSAGPP*LLALMADWLRDDGT
Trigger: TGTTCCATCATCCCTGAGCCAGTCGGCCATTAACGCTAACAGCCACGGAGGCCCTGCACTCAGCTTCCCCTTACCCCTGCACGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp TCCTTGGGTACCACAGCTGTGGCTTGCAGCTTGGCGTTGAGCAGCTaGTTATGGGCAGCGTGCAGGGGTAAGGGGAAGCTGAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: SLGTTAVACSLALSS*LWAACRGKGKLSAG
Trigger: CCCTGCACTCAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp CTGTGTCCTCCGGGGAGCCATAGGAGGGGCTGCCCTGTGATAAGGTaGCCCAGCTTGAGTCCTCATCACTGGCTGCACTGTTTCGCATGC +
Preference number: 5 (lower is better)
Translates to: LCPPGSHRRGCPVIR*PSLSPHHWLHCFAC
Trigger: GCATGCGAAACAGTGCAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCTCCCCGGAGGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCTCGGTTGGCTGCATaGTGGGCCGAGAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSPRLAA*WAESSS
Trigger: GCTGGAGCTCTCGGCCCACAATGCAGCCAACCGAGG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TGGGGCGGACAGAGAGGCAAGCATGCTGAGGTGGGGGACAATGCCCAGCACAGCCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: WGGQRGKHAEVGDNAQHSRTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...GCTGTGCTGGGCATTGTCCCCCACCTCAGCATGCTTGCCTCTCTGTCCGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCTGGTGGCGATGTTCTaGGCAGGTGCCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSLVAMF*AGASQR
Trigger: TCGCTGTGAGGCACCTGCCAAGAACATCGCCACCAG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTCCACCCTACACGTCTaGCAACTGACTCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSTLHV*QLTPQG
Trigger: CCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCCCAGACGTTTGGGCTaGAGGGAACCCCACAGCGAC +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEPRRLG*REPHSD
Trigger: GTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS GCA 90 bp GGTTCCAGAAGGAATCTGTGTCCTCCGGGGAGCCATAGGAGGGGCTaGCCTGTGATAAGGTGGCCCAGCTTGAGTCCTCATCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GSRRNLCPPGSHRRG*PVIRWPSLSPHHWL
Trigger: CAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCTCCCCGGAGGACACAGATTCCTTCTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp GCCTCCTCCGCCAAGGTCAAGGTCACATTTCGGTTCTGGTCTCGGTaGGCTGTGGCAGCCCTCCGAAGCTGGTTCTGGCCTTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: ASSAKVKVTFRFWSR*AVAALRSWFWPSFN
Trigger: GTTAAAGGAAGGCCAGAACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCGAAATGTGACCTTGACCTTGGCGGAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCGCACTTCGAAGGTCCTaGGGTACCACAGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSALRRS*GTTAVA
Trigger: AGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGC...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCTGGTGGCGATGTTCTaGGCAGGTGCCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWELVAMF*AGASQR
Trigger: TCGCTGTGAGGCACCTGCCAAGAACATCGCCACCAG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCTGGTGGCGATGTTCTaGGCAGGTGCCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSLVAMF*AGASQR
Trigger: TCGCTGTGAGGCACCTGCCAAGAACATCGCCACCAG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCCACCCTACACGTCTaGCAACTGACTCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPSTLHV*QLTPQG
Trigger: CCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTCCACCCTACACGTCTaGCAACTGACTCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSTLHV*QLTPQG
Trigger: CCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCCAGACGTTTGGGCTaGAGGGAACCCCACAGCGAC +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSPRRLG*REPHSD
Trigger: GTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS GCA 90 bp TCTCCCATAGCACTTCGAAGGTCCTTGGGTACCACAGCTGTGGCTTaGAGCTTGGCGTTGAGCAGCTGGTTATGGGCAGCGTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SPIALRRSLGTTAVA*SLALSSWLWAACRG
Trigger: ACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGCTATGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp ACATTTCGGTTCTGGTCTCGGTGGGCTGTGGCAGCCCTCCGAAGCTaGTTCTGGCCTTCCTTTAACCACTTGGCATTGGCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TFRFWSRWAVAALRS*FWPSFNHLALAGPG
Trigger: ACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGGCCAGAACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCGAAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp CCGCCAAGGTCAAGGTCACATTTCGGTTCTGGTCTCGGTGGGCTGTaGCAGCCCTCCGAAGCTGGTTCTGGCCTTCCTTTAACCACTTGG +
Preference number: 5 (lower is better)
Translates to: PPRSRSHFGSGLGGL*QPSEAGSGLPLTTW
Trigger: CCAAGTGGTTAAAGGAAGGCCAGAACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCGAAATGTGACCTTGACCTTGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp GCATTAAGCCTTTGGGACCCAAAGGTGCCGTCTCAGCCTCCTGGCTaGCCTCCTCCGCCAAGGTCAAGGTCACATTTCGGTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: ALSLWDPKVPSQPPG*PPPPRSRSHFGSGL
Trigger: GAGACCAGAACCGAAATGTGACCTTGACCTTGGCGGAGGAGGCCAGCCAGGAGGCTGAGACGGCACCTTTGGGTCCCAAAGGCTTAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp AAGGAATCAGGGCAGAGCGTCTGCCAGGCAAGATCCTCCTCCGCCTaGAGTTCTCGAGGGAGGGGCCAAGACCACCATACTAAGGAACCT +
Preference number: 5 (lower is better)
Translates to: KESGQSVCQARSSSA*SSRGRGQDHHTKEP
Trigger: AGGTTCCTTAGTATGGTGGTCTTGGCCCCTCCCTCGAGAACTCCAGGCGGAGGAGGATCTTGCCTGGCAGACGCTCTGCCCTGATTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187721.8
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCGCACTTCGAAGGTCCTaGGGTACCACAGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSALRRS*GTTAVA
Trigger: AGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGC...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCACTTCGAAGGTCCTaGGGTACCACAGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPALRRS*GTTAVA
Trigger: AGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGC...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTTTAACCACTTGGCATaGGCAGGGCCTGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSFNHLA*AGPGSG
Trigger: GCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAAA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCCTTCCTTTAACCACTaGGCATTGGCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGPSFNH*ALAGPG
Trigger: ACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATAAGGTGGCCCAGCTaGAGTCCTCATCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSIRWPS*SPHHWL
Trigger: CAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTAT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGRTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSRTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCTGGTGGCGATGTTCTaGGCAGGTGCCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPLVAMF*AGASQR
Trigger: TCGCTGTGAGGCACCTGCCAAGAACATCGCCACCAG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCCACCCTACACGTCTaGCAACTGACTCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSTLHV*QLTPQG
Trigger: CCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCCCAGACGTTTGGGCTaGAGGGAACCCCACAGCGAC +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHPRRLG*REPHSD
Trigger: GTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS TCA 90 bp TCATCTGGTCCCTGTTCCTGGGTGTTGATGATCAAGGCGGATCCATaGAGCCCTCGGTTGGCTGCATTGTGGGCCGAGAGCTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SSGPCSWVLMIKADP*SPRLAALWAESSSS
Trigger: TGAGCTGGAGCTCTCGGCCCACAATGCAGCCAACCGAGGGCTTCATGGATCCGCCTTGATCATCAACACCCAGGAACAGGGACCAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS GCA 90 bp CGGTTGGCTGCATTGTGGGCCGAGAGCTCCAGCTCAGAGTATAGATaGATTAAGCCTTTGGGACCCAAAGGTGCCGTCTCAGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RLAALWAESSSSEYR*IKPLGPKGAVSASW
Trigger: CCAGGAGGCTGAGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCTGGAGCTCTCGGCCCACAATGCAGCCAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTGCTTGCAGCTTGGCGTaGAGCAGCTGGTTATGGGCA +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPACSLA*SSWLWA
Trigger: TGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGC...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCTTGCAGCTTGGCGTaGAGCAGCTGGTTATGGGCA +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSACSLA*SSWLWA
Trigger: TGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTACCACAGCTGTGGCTaGCAGCTTGGCGTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSYHSCG*QLGVEQ
Trigger: CTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATTTAACCACTTGGCATaGGCAGGGCCTGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPFNHLA*AGPGSG
Trigger: GCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAAA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCCCTGTTCCTGGGTGTaGATGATCAAGGCGGATCCA +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSPCSWV*MIKADP
Trigger: TGGATCCGCCTTGATCATCAACACCCAGGAACAGGG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCCCTGTTCCTGGGTGTaGATGATCAAGGCGGATCCA +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEPCSWV*MIKADP
Trigger: TGGATCCGCCTTGATCATCAACACCCAGGAACAGGG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCAGGAGGCTAGCACTCTaGCTGTGTTCCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFRRLAL*LCSRGP
Trigger: CGGCCCCCGGGAACACAGCAAGAGTGCTAGCCTCCT...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCATAAGGTGGCCCAGCTaGAGTCCTCATCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSIRWPS*SPHHWL
Trigger: CAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTAT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAATAAGGTGGCCCAGCTaGAGTCCTCATCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPIRWPS*SPHHWL
Trigger: CAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTAT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGSVSKA*GFQKES
Trigger: AGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWERTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSRTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWETKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 90 bp GAAGGACAATGTCGCCTCCTCGGGGTCCTTCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTCATCCTTCCAAAACTCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: EGQCRLLGVLQSQLH*GLLTGFILPKLSFL
Trigger: GAGGAAGGAGAGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTGAAGGACCCCGAGGAGGCGACATTGTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000081165.14
ENSMUST00000186868.2
ENSMUST00000187051.7
ENSMUST00000187057.7
ENSMUST00000187683.7
ENSMUST00000187721.8
ENSMUST00000188368.7
ENSMUST00000188440.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
ENSMUST00000210079.2
CDS CCA 90 bp AGCGCACAGCGAAACAAAACCTTGATCCCTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCTGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SAQRNKTLIPGLAFR*DSFSSSWGTGSGLR
Trigger: CCTCAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGGTTTTGTTTCGCTGTGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210079.2
CDS CCA 90 bp GACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGATCCCTaGGTTGGCATTCCGTTGGGACAGCTTCTCTTCCTCCTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: DQAASIAPFRHDLDP*VGIPLGQLLFLLGN
Trigger: GTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGCTTGCAGCTTGGCGTaGAGCAGCTGGTTATGGGCA +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHACSLA*SSWLWA
Trigger: TGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTTTAACCACTTGGCATaGGCAGGGCCTGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPFNHLA*AGPGSG
Trigger: GCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAAA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCTTCCTTTAACCACTaGGCATTGGCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSPSFNH*ALAGPG
Trigger: ACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCCTGTTCCTGGGTGTaGATGATCAAGGCGGATCCA +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSPCSWV*MIKADP
Trigger: TGGATCCGCCTTGATCATCAACACCCAGGAACAGGG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSVSKA*GFQKES
Trigger: AGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGTTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AGAAAGGGAGCCTTGGTGCTTCACAGCATCCAGTCTAGGTGTAGGAGGAGGAGGCACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: RKGALVLHSIQSRCRRRRHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...CCTCCTCCTCCTACACCTAGACTGGATGCTGTGAAGCACCAAGGCTCCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWESWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp ATTTCTCTCTCCCAGCCCCTAGGTAGGGAACCCCAGCTACTGAGGAAGGGCAGCTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 5 (lower is better)
Translates to: ISLSQPLGREPQLLRKGSSRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...GCTGCCCTTCCTCAGTAGCTGGGGTTCCCTACCTAGGGGCTGGGAGAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWESRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGGCACCAGCTCATTCTTaGGTGCTGGGAATTCCACTT +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGAPAHS*VLGIPL
Trigger: AAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGC...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: GDGEPKAGFASGPSCHQSSQVID*ELLHQL
Trigger: GAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGA...GGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCCCAGACGTTTGGGCTaGAGGGAACCCCACAGCGAC +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFPRRLG*REPHSD
Trigger: GTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CCCAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAAGGAATCTGGACTGTaGTCCTGCAGGATGATAGCC +
Preference number: 5 (lower is better)
Translates to: PKPLSSLGPQTSRQRKDGKESGL*SCRMIA
Trigger: GGCTATCATCCTGCAGGACAACAGTCCAGATTCCTT...CCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187057.7
ENSMUST00000188368.7
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATCCTTCCTTTAACCACTaGGCATTGGCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHPSFNH*ALAGPG
Trigger: ACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGG...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSVSKA*GFQKES
Trigger: AGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSVSKA*GFQKES
Trigger: AGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWEFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCTGGTGGCGATGTTCTaGGCAGGTGCCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFLVAMF*AGASQR
Trigger: TCGCTGTGAGGCACCTGCCAAGAACATCGCCACCAG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATC +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHTKQRA*RRSDMI
Trigger: GATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSSRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGATGGAGAGCCCAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCATCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: GMESPRLALLLAPHVISPSQVID*ELLHQL
Trigger: GAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGA...TGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTGGGCTCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: QTLEFPGAPNKQAEEGWESQVID*ELLHQL
Trigger: GAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGA...CTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS TCA 90 bp CTGGGTTCATCCTTCCAAAACTCTCCTTCCTCAAAGCCTTCTTGGTaGGCAAAGCCAGTCCAGGTGAGCTGGGACTCTTCTTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LGSSFQNSPSSKPSW*AKPVQVSWDSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAAGGAGAGTTTTGGAAGGATGAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000081165.14
ENSMUST00000186868.2
ENSMUST00000187051.7
ENSMUST00000187057.7
ENSMUST00000187683.7
ENSMUST00000187721.8
ENSMUST00000188368.7
ENSMUST00000188440.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
ENSMUST00000210079.2
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGCTTGCAGCTTGGCGTaGAGCAGCTGGTTATGGGCA +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDACSLA*SSWLWA
Trigger: TGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGCACTTCGAAGGTCCTaGGGTACCACAGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDALRRS*GTTAVA
Trigger: AGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTTTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCACTTGATCCCTGGGTaGGCATTCCGTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFHLIPG*AFRWDS
Trigger: GCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTGCACCAGCTCATTCTTaGGTGCTGGGAATTCCACTT +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSAPAHS*VLGIPL
Trigger: AAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGC...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000081165.14
ENSMUST00000187057.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp GGGTGTAGGAAGAACATCCACAGCCCCTACCTGCCCCAAACCCTTGAGTTCCCTTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: GCRKNIHSPYLPQTLEFPSQVID*ELLHQL
Trigger: GAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGA...AGGGAACTCAAGGGTTTGGGGCAGGTAGGGGCTGTGGATGTTCTTCCTACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACCCTTGAGTTCCCTGGGGCCCCAAACAAGCAGGCAGAGGAAGGATGGGAGTAAGGAATCTGGACTGTaGTCCTGCAGGATGATAGCC +
Preference number: 5 (lower is better)
Translates to: KPLSSLGPQTSRQRKDGSKESGL*SCRMIA
Trigger: GGCTATCATCCTGCAGGACAACAGTCCAGATTCCTT...ACTCCCATCCTTCCTCTGCCTGCTTGTTTGGGGCCCCAGGGAACTCAAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187057.7
ENSMUST00000188368.7
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCTTCCTTTAACCACTaGGCATTGGCAGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDPSFNH*ALAGPG
Trigger: ACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCCTGTTCCTGGGTGTaGATGATCAAGGCGGATCCA +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDPCSWV*MIKADP
Trigger: TGGATCCGCCTTGATCATCAACACCCAGGAACAGGG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081165.14
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCCATGCACCAGCTCATTCTTaGGTGCTGGGAATTCCACTT +
Preference number: 5 (lower is better)
Translates to: LVISVQRRCPQNRGEGIHAPAHS*VLGIPL
Trigger: AAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGC...ATGGATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS TCA 90 bp CCTTCATTTACCTTCCAAAACTCTCCTTCCTCAAAGCCTTCTTGGTaGGCAAAGCCAGTCCAGGTGAGCTGGGACTCTTCTTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PSFTFQNSPSSKPSW*AKPVQVSWDSSWGL
Trigger: CAGCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAAGGAGAGTTTTGGAAGGTAAATGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR CAA 90 bp GAAGACAGGACTGACTCCAGGGCCCCATTAATCACGTCTACCCCAACAGGTTTAAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: EDRTDSRAPLITSTPTGLSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...TAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAGTCAGTCCTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCCGAAACACGTGGCACTaGAGCATCTGGGTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFRNTWH*SIWVSL
Trigger: TAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCG...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCGCACCAGCTCATTCTTaGGTGCTGGGAATTCCACTT +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFAPAHS*VLGIPL
Trigger: AAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGC...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATGCACCAGCTCATTCTTaGGTGCTGGGAATTCCACTT +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDAPAHS*VLGIPL
Trigger: AAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGC...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TTTATTAGTGATATCAGTACAGCGGAGGTGCCCGCAGAACAGGGGAGAGGGGATTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: FISDISTAEVPAEQGRGDSQVID*ELLHQL
Trigger: GAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGA...ATCCCCTCTCCCCTGTTCTGCGGGCACCTCCGCTGTACTGATATCACTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp CAAGGCTGGCTTTGCTTCTGGCCCCTCATGTCATCAGTCCAGTGTAATGACTTCTCCCAGGTAATAGACTaGGAACTTCTGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: QGWLCFWPLMSSVQCNDFSQVID*ELLHQL
Trigger: GAGCTGGTGCAGAAGTTCCAAGTCTATTACCTGGGA...GAAGTCATTACACTGGACTGATGACATGAGGGGCCAGAAGCAAAGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCCTCGGTTGGCTGCATaGTGGGCCGAGAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLPRLAA*WAESSS
Trigger: GCTGGAGCTCTCGGCCCACAATGCAGCCAACCGAGG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCAGGAGGCTAGCACTCTaGCTGTGTTCCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLRRLAL*LCSRGP
Trigger: CGGCCCCCGGGAACACAGCAAGAGTGCTAGCCTCCT...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AAACACGTGGCACTTGAGCATCTGGGTCAGCTTATCTCGAGCTACGTAGGCAAATTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: KHVALEHLGQLISSYVGKFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...TTTGCCTACGTAGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188001.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCCCAGACGTTTGGGCTaGAGGGAACCCCACAGCGAC +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLPRRLG*REPHSD
Trigger: GTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp AACAGGTTTAGCAACTGGCACATTTCCCAGGTAATAGACTTGGAACTTCTGCACTGGCGGATACAATTGTaGACTGCCACACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: NRFSNWHISQVIDLELLHWRIQL*TATLLR
Trigger: ACGCAGCAGTGTGGCAGTCAACAATTGTATCCGCCA...GTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186814.2
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCTGGTGGCGATGTTCTaGGCAGGTGCCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLLVAMF*AGASQR
Trigger: TCGCTGTGAGGCACCTGCCAAGAACATCGCCACCAG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTCCACCCTACACGTCTaGCAACTGACTCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSTLHV*QLTPQG
Trigger: CCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCATAAGGTGGCCCAGCTaGAGTCCTCATCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLIRWPS*SPHHWL
Trigger: CAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTAT...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCCGCACAGCGAAACACTaGATCCCTGGGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLRTAKH*IPGLAF
Trigger: GAATGCCAACCCAGGGATCAAGTGTTTCGCTGTGCG...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSVSKA*GFQKES
Trigger: AGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCAGCTGGCGGATACAATaGTTGACTGCCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSWRIQ*LTATLL
Trigger: CAGCAGTGTGGCAGTCAACAATTGTATCCGCCAGCT...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTG +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLSRESP*TKQRAL
Trigger: CAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCTTCCTCAAAGCCTTCTaGGTGAGCAAAGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLFLKAF*VSKASP
Trigger: TGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAA...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188001.7
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS-3UTR CAA 90 bp TCATGTCATCAGTCCAGTGTAATGACTTCTGTGAAGGAATTCAATTTCTCTCTCGCACCAGCTCATTCTTaGGTGCTGGGAATTCCACTT +
Preference number: 5 (lower is better)
Translates to: SCHQSSVMTSVKEFNFSLAPAHS*VLGIPL
Trigger: AAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGC...GAGAGAGAAATTGAATTCCTTCACAGAAGTCATTACACTGGACTGATGACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000081165.14
ENSMUST00000188368.7
ENSMUST00000189072.7
ENSMUST00000189265.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 72 bp CTCTTGCTGTGTTCCCGGGGGCCGTCTGTGAGGGCCTaGGGCCCAGAGGGGACTTCCACATTCTCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: LLLCSRGPSVRA*GPEGTSTFSRG
Trigger: GCCTCTGGAGAATGTGGAAGTCCCCTCTGGGCCCCAGGCCCTCACAGACGGCCCCCGGGAACACAGCAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS GCA 72 bp TGCAGCTTGGCGTTGAGCAGCTGGTTATGGGCAGCGTaGAGGGGTAAGGGGAAGCTGAGTGCAGGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: CSLALSSWLWAA*RGKGKLSAGPP
Trigger: CGGAGGCCCTGCACTCAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 72 bp GGGCAGAGCGTCTGCCAGGCAAGATCCTCCTCCGCCTaGAGTTCTCGAGGGAGGGGCCAAGACCACCATACT +
Preference number: 6 (lower is better)
Translates to: GQSVCQARSSSA*SSRGRGQDHHT
Trigger: AGTATGGTGGTCTTGGCCCCTCCCTCGAGAACTCCAGGCGGAGGAGGATCTTGCCTGGCAGACGCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187721.8
CDS CCA 72 bp CCGGGGAGCCATAGGAGGGGCTGCCCTGTGATAAGGTaGCCCAGCTTGAGTCCTCATCACTGGCTGCACTGT +
Preference number: 6 (lower is better)
Translates to: PGSHRRGCPVIR*PSLSPHHWLHC
Trigger: ACAGTGCAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS TCA 72 bp CCTTGGGTACCACAGCTGTGGCTTGCAGCTTGGCGTTaGGCAGCTGGTTATGGGCAGCGTGCAGGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: PWVPQLWLAAWR*AAGYGQRAGVR
Trigger: CCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS GCA 72 bp GCGTTGGGGTTCCAGAAGGAATCAGGGCAGAGCGTCTaGCAGGCAAGATCCTCCTCCGCCTGGAGTTCTCGA +
Preference number: 6 (lower is better)
Translates to: ALGFQKESGQSV*QARSSSAWSSR
Trigger: TCGAGAACTCCAGGCGGAGGAGGATCTTGCCTGGCAGACGCTCTGCCCTGATTCCTTCTGGAACCCCAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187721.8
CDS CCA 72 bp ACCACAGCTGTGGCTTGCAGCTTGGCGTTGAGCAGCTaGTTATGGGCAGCGTGCAGGGGTAAGGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: TTAVACSLALSS*LWAACRGKGKL
Trigger: CAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 90 bp CTTCGAAGGTCCTTGGGTACCACAGCTGTGGCTTGCAGCTTGGCGTaGAGCAGCTGGTTATGGGCAGCGTGCAGGGGTAAGGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LRRSLGTTAVACSLA*SSWLWAACRGKGKL
Trigger: CAGCTTCCCCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 90 bp CTCTCCCATAGCACTTCGAAGGTCCTTGGGTACCACAGCTGTGGCTaGCAGCTTGGCGTTGAGCAGCTGGTTATGGGCAGCGTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LSHSTSKVLGYHSCG*QLGVEQLVMGSVQG
Trigger: CCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGCTATGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS GCA 72 bp GCACTTCGAAGGTCCTTGGGTACCACAGCTGTGGCTTaGAGCTTGGCGTTGAGCAGCTGGTTATGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: ALRRSLGTTAVA*SLALSSWLWAA
Trigger: CGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp TCCTTGGGTACCACAGCTGTGGCTTGCAGCTTGGCGTaGAGCAGCTGGTTATGGGCAGCGTGCAGGGGTAAG +
Preference number: 6 (lower is better)
Translates to: SLGTTAVACSLA*SSWLWAACRGK
Trigger: CTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 90 bp ATAGCACTTCGAAGGTCCTTGGGTACCACAGCTGTGGCTTGCAGCTaGGCGTTGAGCAGCTGGTTATGGGCAGCGTGCAGGGGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: IALRRSLGTTAVACS*ALSSWLWAACRGKG
Trigger: CCCCTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 90 bp CCTGGTTCAGGCACACTACCCTCTCCCATAGCACTTCGAAGGTCCTaGGGTACCACAGCTGTGGCTTGCAGCTTGGCGTTGAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: PGSGTLPSPIALRRS*GTTAVACSLALSSW
Trigger: CCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGCTATGGGAGAGGGTAGTGTGCCTGAACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 90 bp CCGGGGAGCCATAGGAGGGGCTGCCCTGTGATAAGGTGGCCCAGCTaGAGTCCTCATCACTGGCTGCACTGTTTCGCATGCCAAATAGGA +
Preference number: 6 (lower is better)
Translates to: PGSHRRGCPVIRWPS*SPHHWLHCFACQIG
Trigger: TCCTATTTGGCATGCGAAACAGTGCAGCCAGTGATGAGGACTCAAGCTGGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCTCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 72 bp ATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTGTGTCCTCCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: IQPVDRNPSRKR*GSRRNLCPPGS
Trigger: GCTCCCCGGAGGACACAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 72 bp TGTCGCCTCCTCGGGGTCCTTCAGTCCCAACTCCATTaGGGCCTCCTCACTGGGTTCATCCTTCCAAAACTC +
Preference number: 6 (lower is better)
Translates to: CRLLGVLQSQLH*GLLTGFILPKL
Trigger: GAGTTTTGGAAGGATGAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTGAAGGACCCCGAGGAGGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000081165.14
ENSMUST00000186868.2
ENSMUST00000187051.7
ENSMUST00000187057.7
ENSMUST00000187683.7
ENSMUST00000187721.8
ENSMUST00000188368.7
ENSMUST00000188440.7
ENSMUST00000189072.7
ENSMUST00000189378.7
ENSMUST00000190369.7
ENSMUST00000191011.7
ENSMUST00000191601.7
ENSMUST00000210079.2
CDS CCA 72 bp ATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCAGGGCAGAGCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: IQPVDRNPSRKR*GSRRNQGRASA
Trigger: GGCAGACGCTCTGCCCTGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187721.8
CDS CAA 72 bp AGCACTTCGAAGGTCCTTGGGTACCACAGCTGTGGCTaGCAGCTTGGCGTTGAGCAGCTGGTTATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: STSKVLGYHSCG*QLGVEQLVMGS
Trigger: GCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp GGCACACTACCCTCTCCCATAGCACTTCGAAGGTCCTaGGGTACCACAGCTGTGGCTTGCAGCTTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: GTLPSPIALRRS*GTTAVACSLAL
Trigger: CAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACCTTCGAAGTGCTATGGGAGAGGGTAGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp CATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCTGTGTCCTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: HPAGRSESVSKA*GFQKESVSSGE
Trigger: CTCCCCGGAGGACACAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081165.14
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp CATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCAGGGCAGAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: HPAGRSESVSKA*GFQKESGQSVC
Trigger: GCAGACGCTCTGCCCTGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187721.8
CDS CAA 90 bp GAGCGCACAGCGAAACAAAACCTTGATCCCTGGGTTGGCATTCCGTaGGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCTGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: ERTAKQNLDPWVGIP*GQLLFLLGNWFWAE
Trigger: CTCAGCCCAGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGGTTTTGTTTCGCTGTGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210079.2
CDS CCA 72 bp TCAAGGTCACATTTCGGTTCTGGTCTCGGTGGGCTGTaGCAGCCCTCCGAAGCTGGTTCTGGCCTTCCTTTA +
Preference number: 6 (lower is better)
Translates to: SRSHFGSGLGGL*QPSEAGSGLPL
Trigger: TAAAGGAAGGCCAGAACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCGAAATGTGACCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp GGGAGCGCACAGCGAAACAAAACCTTGATCCCTGGGTaGGCATTCCGTTGGGACAGCTTCTCTTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GSAQRNKTLIPG*AFRWDSFSSSW
Trigger: CCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGGTTTTGTTTCGCTGTGCGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210079.2
CDS CAA 90 bp AAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGATCCCTGGGTaGGCATTCCGTTGGGACAGCTTCTCTTCCTCCTGGGGAACTGGT +
Preference number: 6 (lower is better)
Translates to: KQRALRRSDMILIPG*AFRWDSFSSSWGTG
Trigger: ACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS CCA 72 bp AGAGCTCCAGCTCAGAGTATAGATGCATTAAGCCTTTaGGACCCAAAGGTGCCGTCTCAGCCTCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: RAPAQSIDALSL*DPKVPSQPPGW
Trigger: CCAGCCAGGAGGCTGAGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCTGGAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp GAGAGCTCCAGCTCAGAGTATAGATGCATTAAGCCTTaGGGACCCAAAGGTGCCGTCTCAGCCTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ESSSSEYRCIKP*GPKGAVSASWL
Trigger: CAGCCAGGAGGCTGAGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCTGGAGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CAA 72 bp CATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCTGGACTGTTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: HPAGRSESVSKA*GFQKESGLLSC
Trigger: GCAGGACAACAGTCCAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187057.7
ENSMUST00000188368.7
CDS CAA 72 bp GCATTGCGCCGTTCAGACATGATCTTGATCCCTGGGTaGGCATTCCGTTGGGACAGCTTCTCTTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ALRRSDMILIPG*AFRWDSFSSSW
Trigger: CCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGATCATGTCTGAACGGCGCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS GCA 72 bp GCATTGTGGGCCGAGAGCTCCAGCTCAGAGTATAGATaGATTAAGCCTTTGGGACCCAAAGGTGCCGTCTCA +
Preference number: 6 (lower is better)
Translates to: ALWAESSSSEYR*IKPLGPKGAVS
Trigger: TGAGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCTGGAGCTCTCGGCCCACAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081165.14
ENSMUST00000188726.2
ENSMUST00000189378.7
ENSMUST00000191011.7
ENSMUST00000191601.7
CDS CCA 72 bp ATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTTaGGGTTCCAGAAGGAATCTGGACTGTTGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: IQPVDRNPSRKR*GSRRNLDCCPA
Trigger: TGCAGGACAACAGTCCAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187057.7
ENSMUST00000188368.7
CDS CAA 72 bp GCGAAACAAAACCTTGATCCCTGGGTTGGCATTCCGTaGGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTC +
Preference number: 6 (lower is better)
Translates to: AKQNLDPWVGIP*GQLLFLLGNWF
Trigger: GAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGGTTTTGTTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210079.2
CDS CAA 72 bp TGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATCTTGATCCCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: WSRESPLTKQRA*RRSDMILIPGL
Trigger: CAACCCAGGGATCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS CAA 90 bp ACCCTCATCCATCCAGCCGGTAGATCGGAATCCGTCTCGAAAGCGTaGGGGTTCCAGAAGGAATCTGGACTGTTGTCCTGCAGGATGATA +
Preference number: 6 (lower is better)
Translates to: TLIHPAGRSESVSKA*GFQKESGLLSCRMI
Trigger: TATCATCCTGCAGGACAACAGTCCAGATTCCTTCTGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGATGGATGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187057.7
ENSMUST00000188368.7
CDS CCA 72 bp CGAAACAAAACCTTGATCCCTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: RNKTLIPGLAFR*DSFSSSWGTGS
Trigger: AGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGGTTTTGTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210079.2
CDS CCA 72 bp TCAGACATGATCTTGATCCCTGGGTTGGCATTCCGTTaGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: SDMILIPGLAFR*DSFSSSWGTGS
Trigger: AGAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGATCATGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS CAA 72 bp TTCAGACATGATCTTGATCCCTGGGTTGGCATTCCGTaGGGACAGCTTCTCTTCCTCCTGGGGAACTGGTTC +
Preference number: 6 (lower is better)
Translates to: FRHDLDPWVGIP*GQLLFLLGNWF
Trigger: GAACCAGTTCCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGATCATGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS CAA 90 bp AGTTTAGAGTGGTCTAGGGAGAGTCCATTGACCAAGCAGCGAGCATaGCGCCGTTCAGACATGATCTTGATCCCTGGGTTGGCATTCCGT +
Preference number: 6 (lower is better)
Translates to: SLEWSRESPLTKQRA*RRSDMILIPGLAFR
Trigger: ACGGAATGCCAACCCAGGGATCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2
CDS CAA 90 bp TGGAAAGGGACATCCACGAGTTTAGAGTGGTCTAGGGAGAGTCCATaGACCAAGCAGCGAGCATTGCGCCGTTCAGACATGATCTTGATC +
Preference number: 6 (lower is better)
Translates to: WKGTSTSLEWSRESP*TKQRALRRSDMILI
Trigger: GATCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCTAGACCACTCTAAACTCGTGGATGTCCCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211614.2